Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>028724
MGSSYFGEPNLGNERGSSSSSSSSRKGKKSNSDKPKQPQRGLGVAQLEKIRLHGQMACNN
YHPITNSFHTPYPTTNFNQEDMRVQTPYSSIPSSSFSYSSSSSPPTSYGYHPSITMGLGD
YERSTIIYGDSQPTTTATSWNPVTGISETQHFTQPNMNRHVLNLPVEDPQLKRSKKHRSH
SMGSSSQNSESSDTQEVDLELRLSI

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028724
        (205 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2117828 - symbol:TIE1 "TCP Interactor containi...   287  2.9e-25   1
TAIR|locus:2061629 - symbol:TIE2 "TCP Interactor containi...   172  3.9e-24   2


>TAIR|locus:2117828 [details] [associations]
            symbol:TIE1 "TCP Interactor containing EAR motif protein
            1" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:BT014763 EMBL:BT015002
            IPI:IPI00535143 RefSeq:NP_194613.4 UniGene:At.31982
            EnsemblPlants:AT4G28840.1 GeneID:829005 KEGG:ath:AT4G28840
            TAIR:At4g28840 eggNOG:NOG270712 HOGENOM:HOG000237678
            InParanoid:Q6IDB0 OMA:IRYGDSQ PhylomeDB:Q6IDB0
            ProtClustDB:CLSN2918848 Genevestigator:Q6IDB0 Uniprot:Q6IDB0
        Length = 193

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 78/211 (36%), Positives = 98/211 (46%)

Query:     1 MGSSYFGEPNLGNEXXXXXXXXXXXXXXXXN----SDKPKQPQRGLGVAQLEKIRLHGQM 56
             MGSS+FG P +G                       SDKPKQPQRGLGVAQLEKIRLHG+ 
Sbjct:     1 MGSSFFGRPKMGGSSSSSPTSSSSSPAKRGKNKNGSDKPKQPQRGLGVAQLEKIRLHGEY 60

Query:    57 ACNNYHPITNSFHTPYPTTNFNQEDMRVQTXXXXXXXXXXXXXXXXXXXXXXXXXXXITM 116
              CN++    N++ + +P+T   QED+R+Q                              M
Sbjct:    61 NCNSF----NTYPSYHPSTY--QEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYGFHPNM 114

Query:   117 GLG----DYERSTIIYGDSQPTTTATSWNPVTGISETQHFTQPNMNRHVLNLPVEDPQLK 172
              +      YER+TI YGDSQP   A SWNP  GI E+QHF +PN  RH L+   ED +  
Sbjct:   115 MMNANNDQYERTTIRYGDSQPHR-APSWNPSYGILESQHFVEPNTTRHFLH---EDQR-- 168

Query:   173 XXXXXXXXXXXXXXXXXXXXDTQEVDLELRL 203
                                 +  E+DLELRL
Sbjct:   169 ------NISLGSGIQNFETSEANELDLELRL 193


>TAIR|locus:2061629 [details] [associations]
            symbol:TIE2 "TCP Interactor containing EAR motif protein
            2" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] EMBL:CP002685 GenomeReviews:CT485783_GR
            HOGENOM:HOG000237678 EMBL:AY219062 EMBL:AY649273 IPI:IPI00516657
            RefSeq:NP_179598.2 UniGene:At.39749 EnsemblPlants:AT2G20080.1
            GeneID:816527 KEGG:ath:AT2G20080 TAIR:At2g20080 eggNOG:NOG314412
            InParanoid:Q84X40 OMA:EPNITRH PhylomeDB:Q84X40
            ProtClustDB:CLSN2681155 Genevestigator:Q84X40 Uniprot:Q84X40
        Length = 178

 Score = 172 (65.6 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
 Identities = 41/91 (45%), Positives = 53/91 (58%)

Query:     1 MGSSYFGEPNL-GNEXXXXXXXXXXXXXXXXN-----SDKPKQPQRGLGVAQLEKIRLHG 54
             MGS++FG PN+ G+                       S+KPKQPQRGLGVAQLEKIRLHG
Sbjct:     1 MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHG 60

Query:    55 QMACNNYHPITNSFHTPYPTTNFNQEDMRVQ 85
             +M+CN+++    S    YP     QED+R+Q
Sbjct:    61 EMSCNSFNSYNPSL---YP-----QEDVRMQ 83

 Score = 119 (46.9 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
 Identities = 30/79 (37%), Positives = 37/79 (46%)

Query:   127 IYGDSQPTTTATSWNPVTGISETQHFTQPNMNRHVLNLPVEDPQLKXXXXXXXXXXXXXX 186
             ++ D     T  SWNP  GI E+QH  +PN+ RH LN   EDP                 
Sbjct:   107 VHRDQYDRATM-SWNPSYGILESQHSLEPNITRHFLN---EDPS---STTRRSKSLGSGI 159

Query:   187 XXXXXXDTQEVDLELRLSI 205
                   + QEVDLELRLS+
Sbjct:   160 QHSGSSENQEVDLELRLSL 178


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.131   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      205       142   0.00091  102 3  11 23  0.38    32
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  146 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.04u 0.12s 11.16t   Elapsed:  00:00:00
  Total cpu time:  11.04u 0.12s 11.16t   Elapsed:  00:00:00
  Start:  Sat May 11 08:25:06 2013   End:  Sat May 11 08:25:06 2013

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