BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028732
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMX0|SODF3_ARATH Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana
GN=FSD3 PE=1 SV=1
Length = 263
Score = 281 bits (719), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 130/161 (80%), Positives = 145/161 (90%)
Query: 41 KIIAYYGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDEL 100
K+ AYYGLKTPPY LDALEPYMS+RTLEVHWG+ HRGYV+ LNK L KDD LYGYT++EL
Sbjct: 45 KVEAYYGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEEL 104
Query: 101 VKVSYNSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKF 160
+K +YN+GNPLP FNNA QV+NHDFFWESMQPGGGD P+ GVLEQI+KDFGSFTNF+EKF
Sbjct: 105 IKATYNNGNPLPEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKF 164
Query: 161 IGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLVWNDI 201
AALT FGSG+VWLVLKREERRL VVKTSNAINPLVW+DI
Sbjct: 165 TNAALTQFGSGWVWLVLKREERRLEVVKTSNAINPLVWDDI 205
>sp|Q5VSB7|SODF2_ORYSJ Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os06g0143000 PE=2 SV=1
Length = 255
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 146/184 (79%), Gaps = 3/184 (1%)
Query: 20 PSKIPKFCHSRRQLHG--SQRASKIIAYYGLKTPPYKLDALEPYMSKRTLEVHWGELHRG 77
P+ +P+ SR Q G S+R SK++AYY L TPPYKLDALEPY+SKRT+E+HWG+ +
Sbjct: 15 PAAVPRRLRSREQRQGCRSRRYSKVVAYYALTTPPYKLDALEPYISKRTVELHWGKHQQD 74
Query: 78 YVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPLPVFNNAVQVWNHDFFWESMQPGGGDI 137
YV+ LNK LA + YGYTL+EL+K +YN+GNPLP +NNA QVWNH FFWESMQP GG
Sbjct: 75 YVDSLNKQLATS-MFYGYTLEELIKEAYNNGNPLPEYNNAAQVWNHHFFWESMQPEGGGS 133
Query: 138 PKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
P GVL+QIEKDFGSFTNF+E+FI +AL+L GSG+VWLVLKR+ER+ +VV T NAI+PL
Sbjct: 134 PGRGVLQQIEKDFGSFTNFREEFIRSALSLLGSGWVWLVLKRKERKFSVVHTQNAISPLA 193
Query: 198 WNDI 201
DI
Sbjct: 194 LGDI 197
>sp|Q9LU64|SODF2_ARATH Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana
GN=FSD2 PE=1 SV=1
Length = 305
Score = 180 bits (457), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 114/173 (65%), Gaps = 16/173 (9%)
Query: 42 IIAYYGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELV 101
I A + LK PPY LDALEP+MS+ TL+ HWG+ H+ YVE LNK + D L +L+E+V
Sbjct: 49 ITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTD-LDALSLEEVV 107
Query: 102 KVSYNSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFI 161
+SYN GN LP FNNA Q WNH+FFWES+QPGGG P +L IE+DFGSF F E+F
Sbjct: 108 LLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFK 167
Query: 162 GAALTLFGSGYVWLVL---------------KREERRLAVVKTSNAINPLVWN 199
AA + FGSG+ WL K E+++L +VKT NA+NPLVW+
Sbjct: 168 SAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWD 220
>sp|P22302|SODF_NICPL Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana
plumbaginifolia GN=SODB PE=2 SV=1
Length = 202
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 108/152 (71%), Gaps = 1/152 (0%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L+ PPY +DALEP+MS RT E HWG+ HR YV+ LNK + + L G TL++++ V+Y
Sbjct: 2 FELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTE-LDGKTLEDIILVTY 60
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
N G PLP FNNA Q WNH FFWESM+P GG P +LE I +DFGS+ F ++F AA
Sbjct: 61 NKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAA 120
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
T FGSG+ WL K EE++LA+VKT NA NPLV
Sbjct: 121 TQFGSGWAWLAYKPEEKKLALVKTPNAENPLV 152
>sp|P28759|SODF_SOYBN Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB
PE=2 SV=1
Length = 248
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 113/177 (63%), Gaps = 16/177 (9%)
Query: 37 QRASKIIAYYGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYT 96
+ K+ A + LK PPY L+ LEP MS++TLE HWG+ H+ YVE L K + + L G +
Sbjct: 18 KEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTE-LDGKS 76
Query: 97 LDELVKVSYNSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNF 156
L+E++ SYN G+ LP FNNA QVWNHDFFWE M+PGGG P +LE IE+DFGSF F
Sbjct: 77 LEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKF 136
Query: 157 KEKFIGAALTLFGSGYVWLVLKR---------------EERRLAVVKTSNAINPLVW 198
++F AA T FGSG+ WL + E+ +L V+K+ NA+NPLVW
Sbjct: 137 LDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDEDNKLVVLKSPNAVNPLVW 193
>sp|P21276|SODF1_ARATH Superoxide dismutase [Fe] 1, chloroplastic OS=Arabidopsis thaliana
GN=FSD1 PE=1 SV=4
Length = 212
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 39 ASKIIAYYGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLD 98
+S + A Y LK PP+ LDALEP+MSK+TLE HWG+ HR YV+ L K + + L G L+
Sbjct: 4 SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLE 62
Query: 99 ELVKVSYNSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKE 158
++ +YN+G+ LP FNNA Q WNH+FFWESM+PGGG P +L +E+DF S+ F E
Sbjct: 63 HIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYE 122
Query: 159 KFIGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
+F AA T FG+G+ WL E +L VVKT NA+NPLV
Sbjct: 123 EFNAAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPLV 159
>sp|Q5VRL3|SODF1_ORYSJ Superoxide dismutase [Fe] 1, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os06g0115400 PE=2 SV=1
Length = 391
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 95/164 (57%), Gaps = 18/164 (10%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGN-- 109
PY DALEPY+SK T+E HWG +VE LN + + G +L +++ S+N G
Sbjct: 130 PYPSDALEPYISKETVEQHWGVHQNIHVERLNGMIGGSE-WEGMSLGQMMLSSFNEGREA 188
Query: 110 PLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFG 169
P P F +A Q+WNHDF+W SMQPGGG P +L+ I +DFGS+ +F+ AA T FG
Sbjct: 189 PHPPFFHAAQIWNHDFYWRSMQPGGGGKPPERLLKFINRDFGSYDGMIRQFMDAASTQFG 248
Query: 170 SGYVWLVLKREE---------------RRLAVVKTSNAINPLVW 198
SG+VWL K + RL + K+ NAINPLVW
Sbjct: 249 SGWVWLCYKTSKLPHVKSRSPIPSDNYGRLVISKSPNAINPLVW 292
>sp|Q8YSZ1|SODF_NOSS1 Superoxide dismutase [Fe] OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=sodB PE=3 SV=3
Length = 200
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 52 PYKLDALEPY-MSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNP 110
PY +ALE Y M T E H+G+ H+ YV+ LNK L L +L+E++++++ +
Sbjct: 9 PYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNK-LTDGTELADKSLEEVIQIAFKDASK 67
Query: 111 LPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGS 170
+FNNA QVWNH FFW S++P GG P +I +DFGSF KE+F AA T FGS
Sbjct: 68 AGIFNNAAQVWNHTFFWNSLKPAGGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGS 127
Query: 171 GYVWLVLKREERRLAVVKTSNAINPLV 197
G+ WL+ + L V KT NA NPL
Sbjct: 128 GWAWLI--DDGGTLKVTKTPNAENPLA 152
>sp|P31108|SODF_LEGPH Superoxide dismutase [Fe] OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=sodB PE=3 SV=1
Length = 192
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY LDAL P++SK TLE H+G+ H YV LNK L TL+E++ +
Sbjct: 3 FTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNK-LIPGTEFESMTLEEIIMKAK 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+FNNA QVWNH F+W SM P GG PK + E I K FGSF FKE+F A
Sbjct: 62 GG-----IFNNAAQVWNHTFYWHSMSPNGGGEPKGRLAEAINKSFGSFAAFKEQFSQTAA 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
T FGSG+ WLV + + L ++ TSNA P+
Sbjct: 117 TTFGSGWAWLV-QDQSGALKIINTSNAGTPMT 147
>sp|P77968|SODF_SYNY3 Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sodB PE=1 SV=3
Length = 199
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
Y L PY ALEP +SK TLE H + H YV N +A D L ++++++K
Sbjct: 3 YALPNLPYDYTALEPCISKSTLEFHHDKHHAAYVNNFNNAVAGTD-LDNQSIEDVIKAVA 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+ +FNNA Q WNH F+W M+PGGG P + ++I DFGSF F E F A
Sbjct: 62 GDASKAGIFNNAAQAWNHSFYWNCMKPGGGGQPSGALADKINADFGSFDAFVEAFKQAGA 121
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
T FGSG+ WLVL + L V KT NA NP+
Sbjct: 122 TQFGSGWAWLVL--DNGTLKVTKTGNAENPMT 151
>sp|P0AGD6|SODF_SHIFL Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2
Length = 193
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY DAL P++S T+E H+G+ H+ YV LN +L K G +L+E+++ S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLN-NLIKGTAFEGKSLEEIIRSSE 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
VFNNA QVWNH F+W + P G P V E I FGSF +FK +F AA+
Sbjct: 62 GG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGSG+ WLV K + +LA+V TSNA PL
Sbjct: 117 KNFGSGWTWLV-KNSDGKLAIVSTSNAGTPLT 147
>sp|P0AGD3|SODF_ECOLI Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB
PE=1 SV=2
Length = 193
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY DAL P++S T+E H+G+ H+ YV LN +L K G +L+E+++ S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLN-NLIKGTAFEGKSLEEIIRSSE 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
VFNNA QVWNH F+W + P G P V E I FGSF +FK +F AA+
Sbjct: 62 GG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGSG+ WLV K + +LA+V TSNA PL
Sbjct: 117 KNFGSGWTWLV-KNSDGKLAIVSTSNAGTPLT 147
>sp|P0AGD4|SODF_ECOL6 Superoxide dismutase [Fe] OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=sodB PE=3 SV=2
Length = 193
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY DAL P++S T+E H+G+ H+ YV LN +L K G +L+E+++ S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLN-NLIKGTAFEGKSLEEIIRSSE 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
VFNNA QVWNH F+W + P G P V E I FGSF +FK +F AA+
Sbjct: 62 GG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGSG+ WLV K + +LA+V TSNA PL
Sbjct: 117 KNFGSGWTWLV-KNSDGKLAIVSTSNAGTPLT 147
>sp|P0AGD5|SODF_ECO57 Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3
SV=2
Length = 193
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY DAL P++S T+E H+G+ H+ YV LN +L K G +L+E+++ S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLN-NLIKGTAFEGKSLEEIIRSSE 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
VFNNA QVWNH F+W + P G P V E I FGSF +FK +F AA+
Sbjct: 62 GG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGSG+ WLV K + +LA+V TSNA PL
Sbjct: 117 KNFGSGWTWLV-KNSDGKLAIVSTSNAGTPLT 147
>sp|Q1RH88|SODF_RICBR Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C)
GN=sodB PE=3 SV=1
Length = 209
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY+ ++ +P+ + T E H G+ H YV+ LN L + L L+E++ S + N +
Sbjct: 20 PYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDKEELQKKNLEEIIDWSSQNQN-I 78
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+FNNA QVWNH FFW S++P GG P +L+QI +DFGSF F E+F A FGSG
Sbjct: 79 AIFNNAAQVWNHTFFWHSIKPNGGGKPSGKILKQINEDFGSFEEFCEQFKAEATGQFGSG 138
Query: 172 YVWLVLKREERRLAVVKTSNAINPLV 197
+ WLV RL +VKT+NA P+
Sbjct: 139 WAWLVYHN--NRLQIVKTANAGTPIA 162
>sp|Q4ULI1|SODF_RICFE Superoxide dismutase [Mn/Fe] OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=sodB PE=3 SV=2
Length = 209
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY ++ +P+ + T + H G+ H YV+ LN L + L L+E+++ S + N
Sbjct: 20 PYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDKEELQKKDLEEIIEWSSQNSNA- 78
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+FNNA Q+WNH FFW S++P GG P +LEQI KDFGSF F E+F A+ FGSG
Sbjct: 79 AIFNNAAQIWNHSFFWHSIKPQGGGKPSGKILEQINKDFGSFEGFCEQFKQEAVGQFGSG 138
Query: 172 YVWLVLKREERRLAVVKTSNAINPLV 197
+ WLV + RL ++KT+NA P+
Sbjct: 139 WAWLVY--HDNRLQIIKTANAGTPIA 162
>sp|Q92HJ3|SODF_RICCN Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=sodB PE=3 SV=1
Length = 209
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY+ ++ +P+ + T + H G+ H YV+ LN L + L L+E+++ S + N
Sbjct: 20 PYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDKEELQKKDLEEIIEWSSQNSNA- 78
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+FNNA Q+WNH FFW S++P GG P +LEQI KDFGSF F E+F A+ FGSG
Sbjct: 79 AIFNNAAQIWNHTFFWHSIKPQGGGKPSGKILEQINKDFGSFEEFCEQFKQEAVGQFGSG 138
Query: 172 YVWLVLKREERRLAVVKTSNAINPLV 197
+ WL+ + RL ++KT+NA P+
Sbjct: 139 WAWLIY--HDNRLQIIKTANAGTPIA 162
>sp|P0A2F4|SODF_SALTY Superoxide dismutase [Fe] OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=sodB PE=3 SV=2
Length = 193
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 88/152 (57%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY DAL P++S TLE H+G+ H+ YV LN +L K G +L+E+V+ S
Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLN-NLIKGTAFEGKSLEEIVRTSE 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+FNNA QVWNH F+W + P G P + + I FGSF FK +F AA+
Sbjct: 62 GG-----IFNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAI 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGSG+ WLV K + +LA+V TSNA PL
Sbjct: 117 KNFGSGWTWLV-KSADGKLAIVSTSNAGTPLT 147
>sp|P0A2F5|SODF_SALTI Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2
Length = 193
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 88/152 (57%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY DAL P++S TLE H+G+ H+ YV LN +L K G +L+E+V+ S
Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLN-NLIKGTAFEGKSLEEIVRTSE 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+FNNA QVWNH F+W + P G P + + I FGSF FK +F AA+
Sbjct: 62 GG-----IFNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAI 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGSG+ WLV K + +LA+V TSNA PL
Sbjct: 117 KNFGSGWTWLV-KSADGKLAIVSTSNAGTPLT 147
>sp|P50061|SODF_PLEBO Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1
Length = 199
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 52 PYKLDALEPY-MSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNP 110
P+ DALEPY M T + H+G+ H YV LNK L + + +L++++K S+ +
Sbjct: 9 PFPKDALEPYGMKAETFDYHYGKHHAAYVTNLNK-LVEGTPMESLSLEDVIKQSFGDSSK 67
Query: 111 LPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGS 170
+ VFNNA QVWNH FFW ++ GGG P + +I+ FGS FKE+F AA T FGS
Sbjct: 68 VGVFNNAAQVWNHTFFWNCLKAGGGGAPTGELAAKIDAAFGSLDKFKEEFSNAAATQFGS 127
Query: 171 GYVWLVLKREERRLAVVKTSNAINPLV 197
G+ WLV + L V KT NA NPLV
Sbjct: 128 GWAWLV--DDGGTLKVTKTPNAENPLV 152
>sp|Q68WK0|SODF_RICTY Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=sodB PE=3 SV=1
Length = 209
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY ++ +P+ + T + H G+ H YV+ LN L + L L+ ++K S + + +
Sbjct: 20 PYAKESFKPHFTCETFDYHHGKHHNSYVQNLNNLLKDREELQKKDLEGIIKWS-SKNSEV 78
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
VFNNA Q+WNH FFW S++P GG P V EQI +DFGSF F E+F AL FGSG
Sbjct: 79 TVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGSFEQFCEQFKQEALGQFGSG 138
Query: 172 YVWLVLKREERRLAVVKTSNAINPLV 197
+VW+V +L ++KTSNA P+V
Sbjct: 139 WVWVVYNN--NKLQIIKTSNADTPIV 162
>sp|P18655|SODF_SYNE7 Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC
7942) GN=sodB PE=3 SV=1
Length = 201
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
Y L P+ AL PY++K TLE H + H YV N + KD L G ++ ++K
Sbjct: 3 YELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAV-KDTDLDGQPIEAVIKAIA 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+ +FNNA Q WNH F+W S++P GG P + ++I DFGSF NF +F AA
Sbjct: 62 GDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAA 121
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
T FGSG+ WLVL + L + KT NA P+
Sbjct: 122 TQFGSGWAWLVL--DNGTLKITKTGNADTPIA 151
>sp|P09213|SODF_PHOLE Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1
SV=1
Length = 193
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L P+ ++ALEP++S+ TLE H+G+ H YV LN L + L +L+E++K S
Sbjct: 2 FELPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNG-LVEGTELAEKSLEEIIKTST 60
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
VFNNA QVWNH F+W + P G P V IEK FGSF FK KF +A+
Sbjct: 61 GG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAI 115
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGS + WLV K LA+V TSNA P+
Sbjct: 116 NNFGSSWTWLV-KNANGSLAIVNTSNAGCPIT 146
>sp|P37369|SODF_BORPE Superoxide dismutase [Fe] OS=Bordetella pertussis (strain Tohama I
/ ATCC BAA-589 / NCTC 13251) GN=sodB PE=3 SV=2
Length = 192
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 7/149 (4%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY LDAL P +SK TLE H+G+ H+ YV LN +L +L+E+VK S SG
Sbjct: 9 PYALDALAPRISKETLEFHYGKHHQTYVTNLN-NLIPGTEFENLSLEEIVKKS--SGG-- 63
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
VFNNA QVWNH F+W S+ P GG P + + I+ +GS FKE F +A FGSG
Sbjct: 64 -VFNNAAQVWNHTFYWNSLSPNGGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGNFGSG 122
Query: 172 YVWLVLKREERRLAVVKTSNAINPLVWND 200
+ WLV K+ + L +V TSNA PL D
Sbjct: 123 WTWLV-KKADGTLDIVNTSNAATPLTTAD 150
>sp|Q9Y1B0|SODF_PLAMA Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1
Length = 198
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 89/144 (61%), Gaps = 7/144 (4%)
Query: 53 YKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPLP 112
Y L+AL P++S+ TL H+ + H GYV LN L KD +L ++VK S SG
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNT-LIKDTPFAEKSLLDIVKES--SG---A 63
Query: 113 VFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSGY 172
+FNNA Q+WNH F+W+SM P G P G+ E+I++DFGSF NFKE+F FGSG+
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 173 VWLVLKREERRLAVVKTSNAINPL 196
WL L +L +++T +A NP+
Sbjct: 124 GWLALNN-NNKLVILQTHDAGNPI 146
>sp|Q9ZD15|SODF_RICPR Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii (strain
Madrid E) GN=sodB PE=3 SV=1
Length = 209
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY ++ +P+ ++ T + H G+ H YV+ LN + + L L+E+++ S + +
Sbjct: 20 PYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIEWSSQNAE-V 78
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+ NNA Q+WNH FFW S++P GG P V EQI KDFGSF F +F A+ FGSG
Sbjct: 79 AILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQEAVGQFGSG 138
Query: 172 YVWLVLKREERRLAVVKTSNAINPLV 197
+ W+V + +L ++KTSNA P+V
Sbjct: 139 WTWVVY--HDNKLQIIKTSNAGTPIV 162
>sp|Q9Y1A9|SODF_PLAVI Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1
Length = 198
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 7/144 (4%)
Query: 53 YKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPLP 112
Y L+AL P++S+ TL H+ + H GYV LN L KD +L ++VK S SG
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNT-LIKDTPFAEKSLLDIVKES--SG---A 63
Query: 113 VFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSGY 172
+FNNA Q+WNH F+W+SM P G P + E+I++DFGSF NFKE+F FGSG+
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 173 VWLVLKREERRLAVVKTSNAINPL 196
WL L +L +++T +A NP+
Sbjct: 124 GWLALNN-NNKLVILQTHDAGNPI 146
>sp|Q9TW89|SODF_PLAFA Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3
SV=1
Length = 198
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 7/144 (4%)
Query: 53 YKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPLP 112
Y L+AL P++S+ TL H+ + H GYV LN L KD +L ++VK S SG
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNT-LIKDTPFAEKSLLDIVKES--SG---A 63
Query: 113 VFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSGY 172
+FNNA Q+WNH F+W+SM P G P + E+I++DFGSF NFKE+F FGSG+
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 173 VWLVLKREERRLAVVKTSNAINPL 196
WL L +L +++T +A NP+
Sbjct: 124 GWLALNN-NNKLVILQTHDAGNPI 146
>sp|Q8IAY6|SODF_PLAF7 Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7)
GN=SODB PE=1 SV=1
Length = 198
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 7/144 (4%)
Query: 53 YKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPLP 112
Y L+AL P++S+ TL H+ + H GYV LN L KD +L ++VK S SG
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNT-LIKDTPFAEKSLLDIVKES--SG---A 63
Query: 113 VFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSGY 172
+FNNA Q+WNH F+W+SM P G P + E+I++DFGSF NFKE+F FGSG+
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 173 VWLVLKREERRLAVVKTSNAINPL 196
WL L +L +++T +A NP+
Sbjct: 124 GWLALNN-NNKLVILQTHDAGNPI 146
>sp|Q27740|SODF_PLAFX Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3)
GN=SODB PE=1 SV=1
Length = 198
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 7/144 (4%)
Query: 53 YKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPLP 112
Y L+AL P++S+ TL H+ + H GYV LN L KD +L ++VK S SG
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNT-LIKDTPFAEKSLLDIVKES--SG---A 63
Query: 113 VFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSGY 172
+FNNA Q+WNH F+W+SM P G P + E+I++DFGSF NFKE+F FGSG+
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 173 VWLVLKREERRLAVVKTSNAINPL 196
WL L +L +++T +A NP+
Sbjct: 124 GWLALNN-NNKLVILQTHDAGNPI 146
>sp|P19685|SODF_COXBU Superoxide dismutase [Fe] OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=sodB PE=1 SV=1
Length = 193
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 83/146 (56%), Gaps = 7/146 (4%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PYKL+ALEP++S+ TLE H G+ HR YV LNK L + L+E+++ S
Sbjct: 9 PYKLNALEPHISQETLEYHHGKHHRAYVNKLNK-LIEGTPFEKEPLEEIIRKSDGG---- 63
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+FNNA Q WNH F+W M P GG P + I+K FGS FK F +A FGSG
Sbjct: 64 -IFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSG 122
Query: 172 YVWLVLKREERRLAVVKTSNAINPLV 197
+ WLV K +L V+ T NA NP+
Sbjct: 123 WAWLV-KDNNGKLEVLSTVNARNPMT 147
>sp|Q88PD5|SODF_PSEPK Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440)
GN=sodB PE=3 SV=3
Length = 198
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 85/149 (57%), Gaps = 7/149 (4%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY DAL+P++SK TLE H + H YV LN +L G TL+E+VK S SG
Sbjct: 9 PYAHDALQPHISKETLEYHHDKHHNTYVVNLN-NLVPGTEFEGKTLEEIVKSS--SGG-- 63
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+FNNA QVWNH F+W + P GG P + + I FGSF FKE+F ++ FGSG
Sbjct: 64 -IFNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSG 122
Query: 172 YVWLVLKREERRLAVVKTSNAINPLVWND 200
+ WLV K+ + LA+ T A PL D
Sbjct: 123 WGWLV-KKADGSLALASTIGAGCPLTSGD 150
>sp|P84612|SODF_PSEHT Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=sodB PE=1 SV=1
Length = 192
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 85/152 (55%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L + PY +DALEP++SK TLE H G+ H YV LN L +L+E+V S
Sbjct: 2 FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNG-LIPGTKFENKSLEEIV-CSS 59
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+ G VFNNA Q+WNH F+W S+ P GG P V + I +GSF FKE A+
Sbjct: 60 DGG----VFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAV 115
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGS + WLV K + L +V TSNA PL
Sbjct: 116 NNFGSSWTWLV-KLADGSLDIVNTSNAATPLT 146
>sp|P53641|SODF_PSEAE Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=sodB PE=3
SV=3
Length = 193
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY+ +ALEP++S TLE H + H YV LN +L G +L+E+VK S SG
Sbjct: 9 PYEKNALEPHISAETLEYHHDKHHNTYVVNLN-NLIPGTEFEGKSLEEIVKSS--SGG-- 63
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+FNNA QVWNH F+W + P GG P + + I FGSF FKE+F ++ FGSG
Sbjct: 64 -IFNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSG 122
Query: 172 YVWLVLKREERRLAVVKTSNAINPLVWND 200
+ WLV K+ + LA+ T A NPL D
Sbjct: 123 WGWLV-KKADGSLALASTIGAGNPLTSGD 150
>sp|P09223|SODF_PSEPU Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3
Length = 198
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY DAL+P++SK TLE H + H YV LN +L G TL+E+VK S SG
Sbjct: 9 PYAHDALQPHISKETLEFHHDKHHNTYVVNLN-NLVPGTEFEGKTLEEIVKTS--SGG-- 63
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSG 171
+FNNA QVWNH F+W + P G P + + I FGSF FKE+F ++ FGSG
Sbjct: 64 -IFNNAAQVWNHTFYWNCLAPNAGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSG 122
Query: 172 YVWLVLKREERRLAVVKTSNAINPLVWND 200
+ WLV K+ + LA+ T A PL D
Sbjct: 123 WGWLV-KKADGSLALASTIGAGCPLTSGD 150
>sp|O15905|SODF_BABBO Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1
Length = 199
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY + L P++S+ TL H+G+ H GYV LN L K L T++EL+
Sbjct: 3 FKLPALPYGMRELIPHISEETLSFHYGKHHAGYVNKLNS-LIKGTPLESCTIEELIL--- 58
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
G VFNNA Q+WNH F+W SM P G P + ++IE+ FGSF+ FK F
Sbjct: 59 --GQTGAVFNNAAQIWNHTFYWNSMGPNCGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLA 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPL 196
FGSG+ WLVLK ++ +V+T +A +PL
Sbjct: 117 GHFGSGWGWLVLK-DDGTADIVQTHDAGSPL 146
>sp|Q9XD74|SODF_RHIME Superoxide dismutase [Mn] OS=Rhizobium meliloti (strain 1021)
GN=sodB PE=1 SV=3
Length = 200
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 84/147 (57%), Gaps = 6/147 (4%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPL 111
PY DAL PYMS+ TLE H + H YV NK LA++ L +L+++VK SY + PL
Sbjct: 9 PYDYDALAPYMSRETLEYHHDKHHLAYVTNGNK-LAEEAGLSDLSLEDIVKKSYGTNQPL 67
Query: 112 PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLE-QIEKDFGSFTNFKEKFIGAALTLFGS 170
FNNA Q +NH FW+ M+ GGG G L+ I+ D G + F+ F A FGS
Sbjct: 68 --FNNAGQHYNHVHFWKWMKKGGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAGAGQFGS 125
Query: 171 GYVWLVLKREERRLAVVKTSNAINPLV 197
G+ WL +K +L + KT N NPLV
Sbjct: 126 GWAWLSVKN--GKLEISKTPNGENPLV 150
>sp|A1VXQ2|SODF_CAMJJ Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1
Length = 220
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L+ PY +A ++S T H G+ H YV LN +L KD G L ++K S
Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLN-NLIKDTEFAGKDLVSIIKTS- 59
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPG-----GGDIPKYGVLEQ--IEKDFGSFTNFKE 158
N G VFNNA QV+NHDF+++ ++P GG Q +EK+FGS NFK
Sbjct: 60 NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKA 115
Query: 159 KFIGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
+FI A +FGSG+ WLV + ++L V TSNA P+
Sbjct: 116 EFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPIT 154
>sp|Q0PBW9|SODF_CAMJE Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=sodB PE=3 SV=1
Length = 220
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L+ PY +A ++S T H G+ H YV LN +L KD G L ++K S
Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLN-NLIKDTEFAGKDLVSIIKTS- 59
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPG-----GGDIPKYGVLEQ--IEKDFGSFTNFKE 158
N G VFNNA QV+NHDF+++ ++P GG Q +EK+FGS NFK
Sbjct: 60 NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKA 115
Query: 159 KFIGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
+FI A +FGSG+ WLV + ++L V TSNA P+
Sbjct: 116 EFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPIT 154
>sp|P53655|SODM_YEREN Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3
SV=1
Length = 207
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
Y L + PY DALEP+ K+T+E+H + H+ YV N L L +++++L+K
Sbjct: 3 YSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLESFPELAKFSVEDLIKDLD 62
Query: 106 NSGNPLPVF--NNAVQVWNHDFFWESMQPGG---GDIPKYGVLEQIEKDFGSFTNFKEKF 160
F NNA NH FW+ ++ G GD+ IE+DFGS +FKEKF
Sbjct: 63 KVPAEKRTFMRNNAGGHANHSLFWKGLKLGTTLTGDLKA-----AIERDFGSVDSFKEKF 117
Query: 161 IGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
AA T FGSG+ WLVLK ++ +LAVV T+N +PL+
Sbjct: 118 EAAAATRFGSGWAWLVLK-DDGKLAVVSTANQDSPLM 153
>sp|O30970|SODF_RHOCA Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1
SV=1
Length = 200
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 46 YGLKTPPYKLDALEPY-MSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVS 104
+ L PY DAL MSK TLE H H+ YV+ NK +A + G +++E+VK +
Sbjct: 3 FELPALPYAHDALASLGMSKETLEYHHDLHHKAYVDNGNKLIAGTE-WEGKSVEEIVKGT 61
Query: 105 YNSGNPLP--VFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQ-IEKDFGSFTNFKEKFI 161
Y +G +FNNA Q WNH FWE M P G D G LE+ + + FGS FKE F
Sbjct: 62 YCAGAVAQSGIFNNASQHWNHAQFWEMMGP-GEDKKMPGALEKALVESFGSVAKFKEDFA 120
Query: 162 GAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
A FGSG+ WLV K + L + KT N +NPL
Sbjct: 121 AAGAGQFGSGWAWLV-KDSDGALKITKTENGVNPLC 155
>sp|P19665|SODF_PORGI Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis (strain
ATCC BAA-308 / W83) GN=sodB PE=1 SV=2
Length = 191
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 85/149 (57%), Gaps = 7/149 (4%)
Query: 48 LKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSYNS 107
L + PY +DAL P +SK T+E H G+ + YV+ LNK + + L+ +V+ S
Sbjct: 5 LISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTE-FENADLNTIVQKSEGG 63
Query: 108 GNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTL 167
+FNNA Q NH+ ++ +PG G PK + E I+K FGSF FKE+F A TL
Sbjct: 64 -----IFNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTL 118
Query: 168 FGSGYVWLVLKREERRLAVVKTSNAINPL 196
FGSG+VWL +L++ K NA NP+
Sbjct: 119 FGSGWVWLA-SDANGKLSIEKEPNAGNPV 146
>sp|P43312|SODF_HELPY Superoxide dismutase [Fe] OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=sodB PE=1 SV=1
Length = 213
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L+ P+ D++ ++S + H G+ H+ YV LN + D D L K
Sbjct: 2 FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFDILTK--- 58
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+SG VFNNA Q++NHDF+W+ + P + + +EKDFGS FKE FI +A
Sbjct: 59 SSGG---VFNNAAQIYNHDFYWDCLSPKATALSD-ELKGALEKDFGSLEKFKEDFIKSAT 114
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
TLFGSG+ W + +++ +++TSNA P+
Sbjct: 115 TLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVT 146
>sp|Q9ZKE6|SODF_HELPJ Superoxide dismutase [Fe] OS=Helicobacter pylori (strain J99)
GN=sodB PE=3 SV=1
Length = 213
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L+ P+ D++ ++S + H G+ H+ YV LN + D L K
Sbjct: 2 FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTK--- 58
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
+SG VFNNA Q++NHDF+W+ + P + + E +EKDFGS FKE FI +A
Sbjct: 59 SSGG---VFNNAAQIYNHDFYWDCLSPKATALSD-ELKEALEKDFGSLEKFKEDFIKSAT 114
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
TLFGSG+ W + +++ +++TSNA P+
Sbjct: 115 TLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVT 146
>sp|P34107|SODF_ENTHI Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2
SV=1
Length = 190
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L PY +ALEP++SK TLE H + H YV LN L K TL+EL+K
Sbjct: 3 FQLPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNG-LVKGTEQEHKTLEELIKQKP 61
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAAL 165
++NNA Q WNH F+W+ M G G P ++ ++ FG FK+KF A+
Sbjct: 62 TQA----IYNNAAQAWNHAFYWKCM-CGCGVKPSEQLIAKLTAAFGGLEEFKKKFTEKAV 116
Query: 166 TLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
FGSG+ WLV + +L ++ T +A+NP+
Sbjct: 117 GHFGSGWCWLV--EHDGKLEIIDTHDAVNPMT 146
>sp|Q9RUV2|SODM_DEIRA Superoxide dismutase [Mn] OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=sodA PE=1 SV=3
Length = 211
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKD---DVLYGYTLDELVK 102
Y L PY DALEP++ RT+E+H + H+ YV+ NK L D+ + +L +
Sbjct: 3 YTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDR 62
Query: 103 VSYNSGNPLPVFNNAVQVWNHDFFWESMQPG----GGDIPKYGVLEQIEKDFGSFTNFKE 158
V + L NNA NH FW+ M G G + P +L+ I FGSF FK+
Sbjct: 63 VPADKKGALR--NNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQ 120
Query: 159 KFIGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
KF AA T FGSG+ WLV+K + +L VV T+N NPL+
Sbjct: 121 KFEDAAKTRFGSGWAWLVVK--DGKLDVVSTANQDNPLM 157
>sp|P28764|SODM_LISMO Superoxide dismutase [Mn] OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=sodA PE=3 SV=1
Length = 202
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
Y L PY DALEP K T+E+H+ + H YV LN+ +A L + +ELV
Sbjct: 3 YELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLD 62
Query: 106 NSGNPL--PVFNNAVQVWNHDFFWESMQPGGGDIPKYGVLEQIEKDFGSFTNFKEKFIGA 163
+ + V N+ NH FW + P GG P + IE +FG+F FKEKF A
Sbjct: 63 SVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAA 122
Query: 164 ALTLFGSGYVWLVLKREERRLAVVKTSNAINPL 196
A FGSG+ WLV+ + +L +V T+N +PL
Sbjct: 123 AAARFGSGWAWLVVN--DGKLEIVSTANQDSPL 153
>sp|P50058|SODM1_PLEBO Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2
SV=1
Length = 248
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 23 IPKF--CHSRRQLHGSQRASKIIAYYGLKTPP--YKLDALEPYMSKRTLEVHWGELHRGY 78
+P F C S Q+ + A+ ++ K P Y ALEPY+ +T+ +H + H Y
Sbjct: 17 VPLFFACQSNSQVDAAPSAAPQLSASPAKLDPLPYDYAALEPYIDAQTMRLHHDKHHATY 76
Query: 79 VEGLNKHLAKDDVLYGYTLDELVKVSYNSGNPLP------VFNNAVQVWNHDFFWESMQP 132
V +N+ L L ++D L++ + N +P + NN NH FW+ M P
Sbjct: 77 VNNINETLKAYPDLQKQSVDSLIQ----NLNQVPEAIRTKIRNNGGGHVNHTMFWQIMAP 132
Query: 133 GGGDIPKYGVLEQIEKDFGSFTNFKEKFIGAALTLFGSGYVWLVLKREERRLAVVKTSNA 192
G P V + I++ FGSF FK++F A FGSG+ WLV R+ +L++ T+N
Sbjct: 133 KAGGTPTGAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLVSDRQG-KLSITSTANQ 191
Query: 193 INPLVWN 199
NPL+ N
Sbjct: 192 DNPLMSN 198
>sp|Q59094|SODM_ACIAD Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1)
GN=sodA PE=3 SV=1
Length = 228
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 52 PYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVK--VSYNSGN 109
PY +AL+P + ++T+E+H+G+ H+ YV+ LN + L L +L K YN+
Sbjct: 31 PYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKQISKYNTA- 89
Query: 110 PLPVFNNAVQVWNHDFFWESMQPGGGD-IPKYGVLEQIEKDFGSFTNFKEKFIGAALTLF 168
V NN +NH FFWES+ P +++QI +DFGS FK+KF AA F
Sbjct: 90 ---VRNNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKFNEAASGRF 146
Query: 169 GSGYVWLVLKREERRLAVVKTSNAINPLV 197
GSG+ WL++ +LAV T N NPL+
Sbjct: 147 GSGWAWLIV-TPNGKLAVTSTPNQDNPLM 174
>sp|P53639|SODF_CAMCO Superoxide dismutase [Fe] OS=Campylobacter coli GN=sodB PE=3 SV=1
Length = 220
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 46 YGLKTPPYKLDALEPYMSKRTLEVHWGELHRGYVEGLNKHLAKDDVLYGYTLDELVKVSY 105
+ L+ PY +A ++S T H G+ H YV LN +L K L ++K S
Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLN-NLIKYTEFASKDLVSIIKSS- 59
Query: 106 NSGNPLPVFNNAVQVWNHDFFWESMQP-----GGGDIPKYGVLEQ--IEKDFGSFTNFKE 158
SG VFNNA QV+NHDF+++ ++P GG Q +EK+FGS NFK
Sbjct: 60 -SGG---VFNNAAQVYNHDFYFDCIKPITGCGCGGSCQSMDANLQAALEKEFGSLENFKA 115
Query: 159 KFIGAALTLFGSGYVWLVLKREERRLAVVKTSNAINPLV 197
+FI A +FGSG+ WLV + ++L V TSNA P+
Sbjct: 116 EFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPIT 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,450,160
Number of Sequences: 539616
Number of extensions: 3709245
Number of successful extensions: 7747
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7169
Number of HSP's gapped (non-prelim): 264
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)