Query 028736
Match_columns 204
No_of_seqs 110 out of 1741
Neff 9.7
Searched_HMMs 29240
Date Tue Mar 26 18:15:16 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/028736.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2229-2233//hhsearch_pdb/028736hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i3y_A Epididymal secretory gl 1.0 1 1 195.5 19.0 161 42-203 31-212 (215)
2 2f8a_A Glutathione peroxidase 1.0 1 1 195.4 18.0 162 42-203 22-208 (208)
3 3dwv_A Glutathione peroxidase- 1.0 1 1 195.1 13.7 160 42-203 22-184 (187)
4 2gs3_A PHGPX, GPX-4, phospholi 1.0 1 1 191.9 17.2 159 42-201 25-185 (185)
5 2r37_A Glutathione peroxidase 1.0 1 1 191.9 18.5 161 42-203 13-194 (207)
6 2obi_A PHGPX, GPX-4, phospholi 1.0 1 1 191.0 16.4 159 42-201 23-183 (183)
7 2v1m_A Glutathione peroxidase; 1.0 1 1 190.7 18.7 162 42-203 7-168 (169)
8 2p5q_A Glutathione peroxidase 1.0 1 1 187.9 17.6 162 42-203 8-169 (170)
9 3kij_A Probable glutathione pe 1.0 1 1 187.3 18.2 157 42-202 14-170 (180)
10 2vup_A Glutathione peroxidase- 1.0 1 1 187.1 17.3 162 42-203 24-186 (190)
No 1
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=195.55 Aligned_cols=161 Identities=40% Similarity=0.657 Sum_probs=141.0
Q ss_pred CCCCCCCEEEECCC-CCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
Q ss_conf 88722640885279-99333687789589999820579898886999999999834898099997379999999999889
Q 028736 42 APKSIYDFTVKDIR-GNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (204)
Q Consensus 42 ~~~~~p~~~l~~~~-g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~ 120 (204)
....+|+|++.+.+ |+.+++++++||++||+||++|||+|+ +++.|++++++|+++++++|+|++|+|..+++++.++
T Consensus 31 ~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~ 109 (215)
T 2i3y_A 31 EKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKE 109 (215)
T ss_dssp CCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHH
T ss_pred CCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCHH-HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
T ss_conf 258767867663799978719993998899999678897757-6999999999845498699999753247678899999
Q ss_pred HHHHHH-----HHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCC---CC------------CCCCCCCEEEEEECCCCCE
Q ss_conf 999998-----652953320000047999741678987752178---65------------5632344016888799958
Q 028736 121 IQEVAC-----TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGG---FL------------GDAIKWNFTKFLVNKEGKV 180 (204)
Q Consensus 121 ~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~P~~~lid~~G~i 180 (204)
+++|++ .+++.+||++.+.|.++.....+|.+++....+ .. ...|.|+|++||||++|+|
T Consensus 110 i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~v 189 (215)
T 2i3y_A 110 ILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIP 189 (215)
T ss_dssp HHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCE
T ss_pred HHHHHHHCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE
T ss_conf 99999841302116865335766336885520579998850755322124432123465545654557659999899829
Q ss_pred EEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 99629999906799999986303
Q 028736 181 VERYAPTTSPLKIEKDIQNLLGS 203 (204)
Q Consensus 181 ~~~~~g~~~~~~~~~~l~~ll~~ 203 (204)
+.++.|..+++++.+.|+++|++
T Consensus 190 v~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 190 VMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp EEEECTTSCHHHHHHHHHHHGGG
T ss_pred EEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99968999999999999999987
No 2
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=1.00 E-value=1 Score=195.41 Aligned_cols=162 Identities=39% Similarity=0.675 Sum_probs=141.3
Q ss_pred CCCCCCCEEEECCC-CCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
Q ss_conf 88722640885279-99333687789589999820579898886999999999834898099997379999999999889
Q 028736 42 APKSIYDFTVKDIR-GNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (204)
Q Consensus 42 ~~~~~p~~~l~~~~-g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~ 120 (204)
.+..+|+|++.+.+ |+.+++++++||++||+||++|||+|+.++|.|++++++++++++.+|+|++|.++.++++++++
T Consensus 22 ~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~ 101 (208)
T 2f8a_A 22 SMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEE 101 (208)
T ss_dssp CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHH
T ss_pred HCCCCCCEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHH
T ss_conf 04764763866278997906999399989999987899467888999999999716798699999887456568899899
Q ss_pred HHHHHH-----HHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCC-------C------------CCCCCCCEEEEEECC
Q ss_conf 999998-----6529533200000479997416789877521786-------5------------563234401688879
Q 028736 121 IQEVAC-----TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGF-------L------------GDAIKWNFTKFLVNK 176 (204)
Q Consensus 121 ~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~------------~~~i~~~P~~~lid~ 176 (204)
+++|++ .+++.+||++.+.|.++......|.+++...... . ...+.|+|++||||+
T Consensus 102 i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~ 181 (208)
T 2f8a_A 102 ILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGP 181 (208)
T ss_dssp HHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECT
T ss_pred HHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf 99998740323356632388777604798754799999841877555300001343111234454686662766999858
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 995899629999906799999986303
Q 028736 177 EGKVVERYAPTTSPLKIEKDIQNLLGS 203 (204)
Q Consensus 177 ~G~i~~~~~g~~~~~~~~~~l~~ll~~ 203 (204)
+|+|+.++.|..+++++.+.|+++|++
T Consensus 182 ~G~i~~~~~g~~~~~~l~~~I~~ll~~ 208 (208)
T 2f8a_A 182 DGVPLRRYSRRFQTIDIEPDIEALLSQ 208 (208)
T ss_dssp TSCEEEEECTTSCGGGGHHHHHHHHC-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 994898768989999999999999609
No 3
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=1.00 E-value=1 Score=195.06 Aligned_cols=160 Identities=52% Similarity=0.851 Sum_probs=144.9
Q ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 88722640885279993336877895899998205798988869999999998348980999973799999999998899
Q 028736 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (204)
Q Consensus 42 ~~~~~p~~~l~~~~g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~~ 121 (204)
.+.++|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+|+|++|.+.+.++++.+++
T Consensus 22 ~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~ 101 (187)
T 3dwv_A 22 AASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEI 101 (187)
T ss_dssp TCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 87765875888689999518990898899999568898728889999999998620886999998865577899999999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCE---EEEEECCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf 999986529533200000479997416789877521786556323440---16888799958996299999067999999
Q 028736 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNF---TKFLVNKEGKVVERYAPTTSPLKIEKDIQ 198 (204)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P---~~~lid~~G~i~~~~~g~~~~~~~~~~l~ 198 (204)
++|++++++.+||++.+.|.++.....+|.++....++.+ ++..+| ++||||++|+|+..+.|..+++.+.+.|+
T Consensus 102 ~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~--~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~ 179 (187)
T 3dwv_A 102 KEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL--ATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLI 179 (187)
T ss_dssp HHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB--SSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCC--CCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 9999852499874020035677433689999875167756--78855665049999799989988799999899999999
Q ss_pred HHHHC
Q ss_conf 86303
Q 028736 199 NLLGS 203 (204)
Q Consensus 199 ~ll~~ 203 (204)
++|++
T Consensus 180 ~lL~~ 184 (187)
T 3dwv_A 180 PLLGS 184 (187)
T ss_dssp HHC--
T ss_pred HHHHC
T ss_conf 99722
No 4
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=191.95 Aligned_cols=159 Identities=50% Similarity=0.871 Sum_probs=140.1
Q ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 88722640885279993336877895899998205798988869999999998348980999973799999999998899
Q 028736 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (204)
Q Consensus 42 ~~~~~p~~~l~~~~g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~~ 121 (204)
.|+.+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+++|++|.+..+++++++.+
T Consensus 25 ~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~ 104 (185)
T 2gs3_A 25 CARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEI 104 (185)
T ss_dssp GCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHH
T ss_pred CCCCCCCCEEECCCCCEEEHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 78876772667689999658996998899998458898608899999999998652884999998865577799999999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCC--CCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 9999865295332000004799974167898775217--86556323440168887999589962999990679999998
Q 028736 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKG--GFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQN 199 (204)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 199 (204)
++|+ ++++.+||++.+.|.++......|.++..... +..+..+.|+|++|+||++|+|+.++.|..+++++.+.|++
T Consensus 105 ~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 183 (185)
T 2gs3_A 105 KEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 183 (185)
T ss_dssp HHHH-HHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHH
T ss_pred HHHH-HHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 9999-983999704642035871145899998754466565577545451599998999799861899999999999997
Q ss_pred HH
Q ss_conf 63
Q 028736 200 LL 201 (204)
Q Consensus 200 ll 201 (204)
+|
T Consensus 184 lL 185 (185)
T 2gs3_A 184 YF 185 (185)
T ss_dssp HC
T ss_pred HC
T ss_conf 59
No 5
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=1.00 E-value=1 Score=191.88 Aligned_cols=161 Identities=39% Similarity=0.639 Sum_probs=139.4
Q ss_pred CCCCCCCEEEECCC-CCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
Q ss_conf 88722640885279-99333687789589999820579898886999999999834898099997379999999999889
Q 028736 42 APKSIYDFTVKDIR-GNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (204)
Q Consensus 42 ~~~~~p~~~l~~~~-g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~ 120 (204)
....+|+|++.+.+ |+.+++++++||++||+||++|||+| .+++.|++++++|+++++++|+|++|+|..+++++.++
T Consensus 13 ~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~ 91 (207)
T 2r37_A 13 ISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSE 91 (207)
T ss_dssp --CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHH
T ss_pred CCCCCCCEEEEECCCCCEECHHHHCCCEEEEEEECCCCCCH-HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
T ss_conf 45766770756379997874999389889999967889874-77999999999843498799999775457679999999
Q ss_pred HHHHHH-----HHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCC---CCC------------CCCCCCEEEEEECCCCCE
Q ss_conf 999998-----652953320000047999741678987752178---655------------632344016888799958
Q 028736 121 IQEVAC-----TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGG---FLG------------DAIKWNFTKFLVNKEGKV 180 (204)
Q Consensus 121 ~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~~------------~~i~~~P~~~lid~~G~i 180 (204)
+++|++ .+++.+||++.+.|.++.....+|.++.....+ ..+ ..+.|.|++||||++|+|
T Consensus 92 i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i 171 (207)
T 2r37_A 92 ILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIP 171 (207)
T ss_dssp HHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCE
T ss_pred HHHHHHHCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE
T ss_conf 99999742401036866524667436885632589999854766321113332223465556755535349999899829
Q ss_pred EEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 99629999906799999986303
Q 028736 181 VERYAPTTSPLKIEKDIQNLLGS 203 (204)
Q Consensus 181 ~~~~~g~~~~~~~~~~l~~ll~~ 203 (204)
+.++.|..+++++.+.|+++|++
T Consensus 172 ~~~~~g~~~~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 172 IMRWHHRTTVSNVKMDILSYMRR 194 (207)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99978999999999999999865
No 6
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=1.00 E-value=1 Score=191.04 Aligned_cols=159 Identities=51% Similarity=0.899 Sum_probs=140.0
Q ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 88722640885279993336877895899998205798988869999999998348980999973799999999998899
Q 028736 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (204)
Q Consensus 42 ~~~~~p~~~l~~~~g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~~ 121 (204)
+|+.+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+++|++|.+..+++++++.+
T Consensus 23 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~ 102 (183)
T 2obi_A 23 CARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEI 102 (183)
T ss_dssp GCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 56734663778689999668981998899999677798858899999999999752895999998887787898999999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCC--CCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 9999865295332000004799974167898775217--86556323440168887999589962999990679999998
Q 028736 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKG--GFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQN 199 (204)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ 199 (204)
++|+ ++++.+||++.+.|.++.....+|+++..... +..+..+.++|++||||++|+|+.++.|..+++++.+.|++
T Consensus 103 ~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 103 KEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp HHHH-HTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred HHHH-HHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 9999-980998657765226884333799986315777776666446566389997999899886999998999999998
Q ss_pred HH
Q ss_conf 63
Q 028736 200 LL 201 (204)
Q Consensus 200 ll 201 (204)
+|
T Consensus 182 lL 183 (183)
T 2obi_A 182 YF 183 (183)
T ss_dssp GC
T ss_pred HC
T ss_conf 59
No 7
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=1.00 E-value=1 Score=190.71 Aligned_cols=162 Identities=51% Similarity=0.899 Sum_probs=143.8
Q ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 88722640885279993336877895899998205798988869999999998348980999973799999999998899
Q 028736 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (204)
Q Consensus 42 ~~~~~p~~~l~~~~g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~~ 121 (204)
.|..+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.+++++++++++++.+++|++|.+..+++++.+.+
T Consensus 7 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~ 86 (169)
T 2v1m_A 7 SWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEI 86 (169)
T ss_dssp CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHH
T ss_pred CCCCCCCCEEECCCCCCCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 77422340664578989027984998899998503698548889999999998432883999998876687898999999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99998652953320000047999741678987752178655632344016888799958996299999067999999863
Q 028736 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 201 (204)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 201 (204)
++|+.++++.+||++.+.|.++......|.++....++..+..+.++|++||||++|+|+.++.|..+++.+.+.|++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 87 KKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp HHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99999862999734878851485610799998850677667723655559998999989987699999899999999986
Q ss_pred HC
Q ss_conf 03
Q 028736 202 GS 203 (204)
Q Consensus 202 ~~ 203 (204)
+.
T Consensus 167 ~~ 168 (169)
T 2v1m_A 167 EK 168 (169)
T ss_dssp HC
T ss_pred CC
T ss_conf 44
No 8
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=1.00 E-value=1 Score=187.94 Aligned_cols=162 Identities=65% Similarity=1.143 Sum_probs=140.9
Q ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 88722640885279993336877895899998205798988869999999998348980999973799999999998899
Q 028736 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (204)
Q Consensus 42 ~~~~~p~~~l~~~~g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~~ 121 (204)
+|..+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+++|++|++.++++++.+.+
T Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 87 (170)
T 2p5q_A 8 NPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQI 87 (170)
T ss_dssp --CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHH
T ss_pred CCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 78642533887489989347992998799999732688637779999999998342987999998787777788999999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99998652953320000047999741678987752178655632344016888799958996299999067999999863
Q 028736 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 201 (204)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 201 (204)
++|++++++.+||++...|.++.....+|.++....++..+.++.|.|++|+||++|+|+.++.|..+++.+.+.|++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 88 TDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp HHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 99999736888604765035787637999999861888658703543327899999979874279899789999999986
Q ss_pred HC
Q ss_conf 03
Q 028736 202 GS 203 (204)
Q Consensus 202 ~~ 203 (204)
+.
T Consensus 168 ~~ 169 (170)
T 2p5q_A 168 EI 169 (170)
T ss_dssp TC
T ss_pred HC
T ss_conf 12
No 9
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=1.00 E-value=1 Score=187.25 Aligned_cols=157 Identities=43% Similarity=0.740 Sum_probs=135.1
Q ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 88722640885279993336877895899998205798988869999999998348980999973799999999998899
Q 028736 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (204)
Q Consensus 42 ~~~~~p~~~l~~~~g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~~ 121 (204)
.+..+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+|+|++|++..+++++++++
T Consensus 14 ~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~ 93 (180)
T 3kij_A 14 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEV 93 (180)
T ss_dssp CCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHH
T ss_pred CCCCCCCEEEECCCCCEECHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 76763524886689999508993998899999806898748899999999998451886999987774566799999999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99998652953320000047999741678987752178655632344016888799958996299999067999999863
Q 028736 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 201 (204)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~ll 201 (204)
++|+++.++.+||++.+.|..+......|.++....++ .+.|.+++||||++|+|+.++.|..+.+.+.+.|+++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 94 ESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKK----EPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp HHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTC----CCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCC----CCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
T ss_conf 99998743999721335641686520789998751798----76533328999899989999899999799999999999
Q ss_pred H
Q ss_conf 0
Q 028736 202 G 202 (204)
Q Consensus 202 ~ 202 (204)
+
T Consensus 170 ~ 170 (180)
T 3kij_A 170 R 170 (180)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 10
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=1.00 E-value=1 Score=187.10 Aligned_cols=162 Identities=54% Similarity=0.931 Sum_probs=141.0
Q ss_pred CCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHH
Q ss_conf 88722640885279993336877895899998205798988869999999998348980999973799999999998899
Q 028736 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (204)
Q Consensus 42 ~~~~~p~~~l~~~~g~~~~l~~~~gk~~li~f~~t~C~~C~~~~~~l~~l~~~~~~~~~~ii~v~~d~~~~~~~~~~~~~ 121 (204)
.++.+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+|+|++|.+.+.++++++.+
T Consensus 24 ~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~ 103 (190)
T 2vup_A 24 AASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEI 103 (190)
T ss_dssp CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHH
T ss_pred CCCCCCCEEEECCCCCEEEHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 88750671787589989777874998899999657897609899999999999752996999997676678898999999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCC-CCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 999986529533200000479997416789877521786556-3234401688879995899629999906799999986
Q 028736 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGD-AIKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNL 200 (204)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~i~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~l 200 (204)
++|++++++.+||++.+.|.++.....+|+++....++..+. .+.|+|++||||++|+|+.++.|..+++.+.+.|+++
T Consensus 104 ~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 183 (190)
T 2vup_A 104 KEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPL 183 (190)
T ss_dssp HHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99998754997279740455762100799998741577677763234404999979995998989999999999999999
Q ss_pred HHC
Q ss_conf 303
Q 028736 201 LGS 203 (204)
Q Consensus 201 l~~ 203 (204)
++.
T Consensus 184 l~~ 186 (190)
T 2vup_A 184 LES 186 (190)
T ss_dssp HHC
T ss_pred HHH
T ss_conf 852
Done!