Your job contains 1 sequence.
>028737
MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI
CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS
GWGGHVYIVTPTEIKERILKGRMD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028737
(204 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036972 - symbol:PBC1 "proteasome beta subunit... 990 9.1e-100 1
TAIR|locus:2204675 - symbol:PBC2 "20S proteasome beta sub... 974 4.5e-98 1
POMBASE|SPCC63.12c - symbol:pup3 "20S proteasome complex ... 638 1.8e-62 1
DICTYBASE|DDB_G0269772 - symbol:psmB3 "proteasome subunit... 636 3.0e-62 1
UNIPROTKB|E1BYW9 - symbol:PSMB3 "Proteasome subunit beta ... 631 1.0e-61 1
UNIPROTKB|O73817 - symbol:psmb3 "Proteasome subunit beta ... 621 1.2e-60 1
UNIPROTKB|P49720 - symbol:PSMB3 "Proteasome subunit beta ... 617 3.1e-60 1
ZFIN|ZDB-GENE-040426-2682 - symbol:psmb3 "proteasome (pro... 616 3.9e-60 1
UNIPROTKB|E2QX17 - symbol:PSMB3 "Proteasome subunit beta ... 613 8.1e-60 1
MGI|MGI:1347014 - symbol:Psmb3 "proteasome (prosome, macr... 612 1.0e-59 1
RGD|61875 - symbol:Psmb3 "proteasome (prosome, macropain)... 612 1.0e-59 1
UNIPROTKB|P40112 - symbol:Psmb3 "Proteasome subunit beta ... 612 1.0e-59 1
UNIPROTKB|P33672 - symbol:PSMB3 "Proteasome subunit beta ... 611 1.3e-59 1
FB|FBgn0026380 - symbol:Prosbeta3 "Proteasome beta3 subun... 604 7.3e-59 1
CGD|CAL0003796 - symbol:PUP3 species:5476 "Candida albica... 592 1.4e-57 1
UNIPROTKB|J9NTB8 - symbol:PSMB3 "Uncharacterized protein"... 572 1.8e-55 1
RGD|1564425 - symbol:RGD1564425 "similar to Proteasome su... 538 7.2e-52 1
WB|WBGene00003949 - symbol:pbs-3 species:6239 "Caenorhabd... 537 9.2e-52 1
UNIPROTKB|Q23237 - symbol:pbs-3 "Proteasome subunit beta ... 537 9.2e-52 1
SGD|S000000896 - symbol:PUP3 "Beta 3 subunit of the 20S p... 533 2.4e-51 1
UNIPROTKB|F1LWQ7 - symbol:F1LWQ7 "Uncharacterized protein... 446 4.0e-42 1
UNIPROTKB|J3QKR3 - symbol:PSMB3 "Proteasome subunit beta ... 442 1.1e-41 1
UNIPROTKB|D4AAA1 - symbol:D4AAA1 "Uncharacterized protein... 422 1.4e-39 1
UNIPROTKB|F1M8Y7 - symbol:F1M8Y7 "Uncharacterized protein... 365 1.5e-33 1
UNIPROTKB|F1M8D0 - symbol:F1M8D0 "Uncharacterized protein... 358 8.5e-33 1
UNIPROTKB|J3KRR2 - symbol:PSMB3 "Proteasome subunit beta ... 308 1.7e-27 1
UNIPROTKB|J3KSM3 - symbol:PSMB3 "Proteasome subunit beta ... 308 1.7e-27 1
UNIPROTKB|Q58634 - symbol:psmB "Proteasome subunit beta" ... 213 2.0e-17 1
UNIPROTKB|P20618 - symbol:PSMB1 "Proteasome subunit beta ... 210 4.1e-17 1
UNIPROTKB|G5E589 - symbol:PSMB1 "Proteasome subunit beta ... 208 6.7e-17 1
MGI|MGI:104884 - symbol:Psmb1 "proteasome (prosome, macro... 208 6.7e-17 1
UNIPROTKB|Q6PDW4 - symbol:Psmb1 "Proteasome subunit beta ... 208 6.7e-17 1
UNIPROTKB|I3LQ51 - symbol:PSMB1 "Proteasome subunit beta ... 207 8.6e-17 1
RGD|621092 - symbol:Psmb1 "proteasome (prosome, macropain... 207 8.6e-17 1
UNIPROTKB|Q6JLB2 - symbol:PSMB1 "Proteasome subunit beta ... 203 2.3e-16 1
TAIR|locus:2101846 - symbol:PBF1 species:3702 "Arabidopsi... 202 2.9e-16 1
UNIPROTKB|Q2TBX6 - symbol:PSMB1 "Proteasome subunit beta ... 201 3.7e-16 1
UNIPROTKB|Q9IB83 - symbol:psmb1-B "Proteasome subunit bet... 200 4.7e-16 1
UNIPROTKB|Q9IB84 - symbol:psmb1-A "Proteasome subunit bet... 200 4.7e-16 1
ZFIN|ZDB-GENE-040618-2 - symbol:psmb1 "proteasome (prosom... 199 6.0e-16 1
UNIPROTKB|I3LCC6 - symbol:PSMB3 "Uncharacterized protein"... 192 3.3e-15 1
UNIPROTKB|D4GYZ1 - symbol:psmB "Proteasome subunit beta" ... 191 4.2e-15 1
POMBASE|SPAC22F8.06 - symbol:pam1 "20S proteasome complex... 187 1.1e-14 1
UNIPROTKB|O35522 - symbol:Psmb9 "Proteasome subunit beta ... 186 1.4e-14 1
UNIPROTKB|F1PF02 - symbol:PSMB1 "Proteasome subunit beta ... 185 1.8e-14 1
UNIPROTKB|O35521 - symbol:Psmb9 "Proteasome subunit beta ... 185 1.8e-14 1
MGI|MGI:1346526 - symbol:Psmb9 "proteasome (prosome, macr... 185 1.8e-14 1
FB|FBgn0002284 - symbol:Prosbeta6 "Proteasome beta6 subun... 182 3.8e-14 1
RGD|3427 - symbol:Psmb9 "proteasome (prosome, macropain) ... 180 6.2e-14 1
UNIPROTKB|Q6MGA6 - symbol:Psmb9 "Proteasome subunit beta ... 180 6.2e-14 1
ZFIN|ZDB-GENE-001208-1 - symbol:psmb11 "proteasome (proso... 178 1.0e-13 1
UNIPROTKB|O35523 - symbol:Psmb9 "Proteasome subunit beta ... 174 2.7e-13 1
UNIPROTKB|Q2PYM7 - symbol:LMP2 "Proteasome subunit beta t... 172 4.4e-13 1
DICTYBASE|DDB_G0267390 - symbol:psmB6 "proteasome subunit... 169 9.1e-13 1
UNIPROTKB|P28065 - symbol:PSMB9 "Proteasome subunit beta ... 169 9.1e-13 1
UNIPROTKB|P28061 - symbol:psmB "Proteasome subunit beta" ... 168 1.2e-12 1
UNIPROTKB|Q5W412 - symbol:PSMB9 "Proteasome subunit beta ... 165 2.4e-12 1
UNIPROTKB|A2ACR1 - symbol:PSMB9 "Proteasome subunit beta ... 162 5.0e-12 1
SGD|S000003538 - symbol:PRE3 "Beta 1 subunit of the 20S p... 161 6.4e-12 1
UNIPROTKB|B0V0T3 - symbol:PSMB9 "Proteasome subunit beta ... 157 1.7e-11 1
UNIPROTKB|Q3SZC2 - symbol:PSMB9 "Proteasome subunit beta ... 156 2.2e-11 1
DICTYBASE|DDB_G0272969 - symbol:psmB1 "proteasome subunit... 155 2.8e-11 1
POMBASE|SPBC4C3.10c - symbol:pre3 "20S proteasome complex... 153 4.5e-11 1
UNIPROTKB|F5H9Q1 - symbol:CNBF3630 "Proteasome subunit be... 153 8.7e-11 1
UNIPROTKB|Q5KFP2 - symbol:CNF01080 "Proteasome subunit be... 153 8.7e-11 1
ASPGD|ASPL0000030334 - symbol:AN5784 species:162425 "Emer... 140 2.5e-10 2
CGD|CAL0000411 - symbol:PRE3 species:5476 "Candida albica... 146 7.2e-10 1
ZFIN|ZDB-GENE-001208-3 - symbol:psmb9b "proteasome (proso... 146 1.3e-09 1
ZFIN|ZDB-GENE-990415-140 - symbol:psmb9a "proteasome (pro... 145 1.4e-09 1
WB|WBGene00003952 - symbol:pbs-6 species:6239 "Caenorhabd... 145 4.1e-09 1
UNIPROTKB|P34286 - symbol:pbs-6 "Proteasome subunit beta ... 145 4.1e-09 1
UNIPROTKB|E2R0B6 - symbol:PSMB6 "Proteasome subunit beta ... 144 4.2e-09 1
SGD|S000000137 - symbol:PRE7 "Beta 6 subunit of the 20S p... 144 4.4e-09 1
UNIPROTKB|P34065 - symbol:PSMB5 "Proteasome subunit beta ... 143 9.6e-09 1
UNIPROTKB|P28072 - symbol:PSMB6 "Proteasome subunit beta ... 142 1.0e-08 1
MGI|MGI:104880 - symbol:Psmb6 "proteasome (prosome, macro... 141 1.4e-08 1
RGD|61881 - symbol:Psmb6 "proteasome (prosome, macropain)... 140 2.2e-08 1
UNIPROTKB|Q3MHN0 - symbol:PSMB6 "Proteasome subunit beta ... 139 3.1e-08 1
UNIPROTKB|F1RFV5 - symbol:PSMB6 "Proteasome subunit beta ... 139 3.2e-08 1
ASPGD|ASPL0000010099 - symbol:AN3493 species:162425 "Emer... 137 3.5e-08 1
TAIR|locus:2079241 - symbol:AT3G26340 species:3702 "Arabi... 140 3.8e-08 1
UNIPROTKB|Q5W416 - symbol:PSMB8 "Proteasome subunit beta ... 131 7.4e-07 1
ASPGD|ASPL0000017034 - symbol:AN3756 species:162425 "Emer... 129 8.0e-07 1
WB|WBGene00003951 - symbol:pbs-5 species:6239 "Caenorhabd... 130 1.1e-06 1
SGD|S000006307 - symbol:PRE2 "Beta 5 subunit of the 20S p... 129 1.5e-06 1
RGD|3426 - symbol:Psmb8 "proteasome (prosome, macropain) ... 126 3.4e-06 1
ZFIN|ZDB-GENE-990415-216 - symbol:psmb6 "proteasome (pros... 123 4.9e-06 1
UNIPROTKB|P28062 - symbol:PSMB8 "Proteasome subunit beta ... 121 1.4e-05 1
CGD|CAL0006242 - symbol:PRE2 species:5476 "Candida albica... 121 1.6e-05 1
UNIPROTKB|Q32KL2 - symbol:PSMB5 "Proteasome subunit beta ... 120 1.7e-05 1
ASPGD|ASPL0000028212 - symbol:AN10708 species:162425 "Eme... 119 2.2e-05 1
UNIPROTKB|P28074 - symbol:PSMB5 "Proteasome subunit beta ... 119 2.3e-05 1
UNIPROTKB|Q5R8S2 - symbol:PSMB5 "Proteasome subunit beta ... 119 2.3e-05 1
DICTYBASE|DDB_G0283679 - symbol:psmB7 "proteasome subunit... 119 2.4e-05 1
UNIPROTKB|E2R3R2 - symbol:PSMB5 "Proteasome subunit beta ... 118 3.1e-05 1
ZFIN|ZDB-GENE-050417-319 - symbol:psmb8f "proteasome (pro... 117 4.7e-05 1
POMBASE|SPAC23D3.07 - symbol:pup1 "20S proteasome complex... 116 5.7e-05 1
UNIPROTKB|Q3T112 - symbol:PSMB8 "Proteasome subunit beta ... 116 6.1e-05 1
MGI|MGI:1346527 - symbol:Psmb8 "proteasome (prosome, macr... 116 6.1e-05 1
UNIPROTKB|F1S9C9 - symbol:LOC100155139 "Proteasome subuni... 115 7.4e-05 1
WARNING: Descriptions of 25 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2036972 [details] [associations]
symbol:PBC1 "proteasome beta subunit C1" species:3702
"Arabidopsis thaliana" [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005839
"proteasome core complex" evidence=IEA;TAS] [GO:0008233 "peptidase
activity" evidence=ISS] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0005774
GO:GO:0000502 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02735
EMBL:AC007727 eggNOG:COG0638 EMBL:Y13173 EMBL:AF043532
EMBL:AY065070 EMBL:AY114628 EMBL:AF344327 EMBL:AK226397
EMBL:AY085532 IPI:IPI00540073 IPI:IPI00542476 PIR:F86350
RefSeq:NP_564149.1 UniGene:At.11467 ProteinModelPortal:Q9XI05
SMR:Q9XI05 STRING:Q9XI05 MEROPS:T01.983 PaxDb:Q9XI05 PRIDE:Q9XI05
EnsemblPlants:AT1G21720.1 GeneID:838776 KEGG:ath:AT1G21720
TAIR:At1g21720 HOGENOM:HOG000090523 InParanoid:Q9XI05 OMA:MVSNLLY
PhylomeDB:Q9XI05 ProtClustDB:CLSN2687900 Genevestigator:Q9XI05
GermOnline:AT1G21720 Uniprot:Q9XI05
Length = 204
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 190/204 (93%), Positives = 198/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAM+KPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVYIVTPTEIKERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204
>TAIR|locus:2204675 [details] [associations]
symbol:PBC2 "20S proteasome beta subunit C2" species:3702
"Arabidopsis thaliana" [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005839
"proteasome core complex" evidence=IEA;TAS] [GO:0008233 "peptidase
activity" evidence=ISS] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737 GO:GO:0000502
EMBL:AC010704 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02735
eggNOG:COG0638 MEROPS:T01.983 HOGENOM:HOG000090523
ProtClustDB:CLSN2687900 EMBL:AF043533 EMBL:AF385730 EMBL:AY081735
IPI:IPI00530299 PIR:F96803 PIR:T51981 RefSeq:NP_001031294.1
RefSeq:NP_565156.1 UniGene:At.10755 ProteinModelPortal:O81153
SMR:O81153 IntAct:O81153 STRING:O81153 PaxDb:O81153 PRIDE:O81153
EnsemblPlants:AT1G77440.1 EnsemblPlants:AT1G77440.2 GeneID:844080
KEGG:ath:AT1G77440 TAIR:At1g77440 InParanoid:O81153 OMA:SIMAYNG
PhylomeDB:O81153 Genevestigator:O81153 GermOnline:AT1G77440
Uniprot:O81153
Length = 204
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 186/204 (91%), Positives = 196/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAMFKPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTP E+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPKEVKERILKGRMD 204
>POMBASE|SPCC63.12c [details] [associations]
symbol:pup3 "20S proteasome complex subunit beta 3, Pup3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
PomBase:SPCC63.12c GO:GO:0005829 GO:GO:0005634 GO:GO:0043161
EMBL:CU329672 GO:GO:0004298 KO:K02735 eggNOG:COG0638 GO:GO:0019774
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY PIR:T41513
RefSeq:NP_587985.1 ProteinModelPortal:Q9Y7T8 SMR:Q9Y7T8
STRING:Q9Y7T8 EnsemblFungi:SPCC63.12c.1 GeneID:2539401
KEGG:spo:SPCC63.12c OrthoDB:EOG46QB2N NextBio:20800565
Uniprot:Q9Y7T8
Length = 204
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 115/204 (56%), Positives = 161/204 (78%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG + VAM GKNC AIASD RLGVQ ++ +F ++ + D+ ++GL+GLATD
Sbjct: 1 MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLY+ ++ LY+ REER ++P+TFA+LVS+ LYEKRFGPYF PV+AG+S+++ PFI
Sbjct: 61 QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C DSIG + A+DF+V+GTA E LYG CE++++P++EPD+LFET+SQALL++ DRDC+S
Sbjct: 121 CGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++T + +R++KGR D
Sbjct: 181 GWGCVVYVITADKCIKRLVKGRQD 204
>DICTYBASE|DDB_G0269772 [details] [associations]
symbol:psmB3 "proteasome subunit beta type 3"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IPI]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 dictyBase:DDB_G0269772 GO:GO:0005634 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0006508
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02735 eggNOG:COG0638
MEROPS:T01.983 OMA:SIMAYNG RefSeq:XP_646265.1 HSSP:P33672
ProteinModelPortal:Q55D66 SMR:Q55D66 STRING:Q55D66
EnsemblProtists:DDB0232932 GeneID:8617221 KEGG:ddi:DDB_G0269772
ProtClustDB:CLSZ2729299 Uniprot:Q55D66
Length = 205
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 116/205 (56%), Positives = 152/205 (74%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A + MVGKNC AIASD R G+Q QTI+ DF ++ +I+D+ F+G+SGL TD+
Sbjct: 1 MSIMAYNGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
QTLYQ+LVFRH LY+LREERDM P ++L++ +LYEKRFGPYF +P+I GL D PF
Sbjct: 61 QTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEGPDNTPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I MD IGA DF+V GT ++YG CE ++K DM D+LFET+SQ +L+S+DRD L
Sbjct: 121 ISGMDLIGASVATDDFLVVGTMTPAMYGVCETLYKKDMNEDDLFETISQCMLASLDRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++TPT++ + L GR D
Sbjct: 181 SGWGAIVHVITPTQVITKKLLGRQD 205
>UNIPROTKB|E1BYW9 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type" species:9031
"Gallus gallus" [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 OMA:MVSNLLY CTD:5691
GeneTree:ENSGT00550000074820 EMBL:AADN02022225 IPI:IPI00574247
RefSeq:XP_418119.2 UniGene:Gga.1459 Ensembl:ENSGALT00000002423
GeneID:419997 KEGG:gga:419997 NextBio:20822972 Uniprot:E1BYW9
Length = 205
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 120/205 (58%), Positives = 157/205 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEPD LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVVVHIIEKDKITTRTLKARMD 205
>UNIPROTKB|O73817 [details] [associations]
symbol:psmb3 "Proteasome subunit beta type-3" species:8022
"Oncorhynchus mykiss" [GO:0005839 "proteasome core complex"
evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
EMBL:AF058707 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 MEROPS:T01.983 HOVERGEN:HBG004446
RefSeq:NP_001117722.1 UniGene:Omy.11891 ProteinModelPortal:O73817
SMR:O73817 PRIDE:O73817 GeneID:100135869 Uniprot:O73817
Length = 205
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 118/205 (57%), Positives = 157/205 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V ++ +I R LK RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>UNIPROTKB|P49720 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0005654 GO:GO:0002479
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0051436 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
GO:GO:0006521 Reactome:REACT_383 GO:GO:0005839 GO:GO:0004298
KO:K02735 eggNOG:COG0638 MEROPS:T01.983 HOGENOM:HOG000090523
OMA:MVSNLLY CTD:5691 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:D26598 EMBL:BC013008 IPI:IPI00028004 PIR:S55041
RefSeq:NP_002786.2 UniGene:Hs.82793 ProteinModelPortal:P49720
SMR:P49720 IntAct:P49720 MINT:MINT-5001041 STRING:P49720
PhosphoSite:P49720 DMDM:20532411 OGP:P49720
REPRODUCTION-2DPAGE:IPI00028004 PaxDb:P49720 PeptideAtlas:P49720
PRIDE:P49720 DNASU:5691 Ensembl:ENST00000225426 GeneID:5691
KEGG:hsa:5691 UCSC:uc002hqr.3 GeneCards:GC17P036909
H-InvDB:HIX0030292 HGNC:HGNC:9540 MIM:602176 neXtProt:NX_P49720
PharmGKB:PA33885 InParanoid:P49720 PhylomeDB:P49720 ChiTaRS:PSMB3
GenomeRNAi:5691 NextBio:22106 Bgee:P49720 CleanEx:HS_PSMB3
Genevestigator:P49720 GermOnline:ENSG00000108294 Uniprot:P49720
Length = 205
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 118/205 (57%), Positives = 155/205 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+PD LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>ZFIN|ZDB-GENE-040426-2682 [details] [associations]
symbol:psmb3 "proteasome (prosome, macropain)
subunit, beta type, 3" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
ZFIN:ZDB-GENE-040426-2682 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
KO:K09580 GO:GO:0005839 GO:GO:0004298 KO:K02735 CTD:5034
eggNOG:COG0638 MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
CTD:5691 GeneTree:ENSGT00550000074820 HOVERGEN:HBG004446
OrthoDB:EOG4XH012 HSSP:P33672 RefSeq:NP_998529.3 UniGene:Dr.115460
GeneID:406673 KEGG:dre:406673 EMBL:CU683898 EMBL:BC049010
IPI:IPI00551909 RefSeq:NP_001123295.1 UniGene:Dr.75646 SMR:Q7ZUJ8
STRING:Q7ZUJ8 Ensembl:ENSDART00000022499 GeneID:573095
KEGG:dre:573095 InParanoid:Q7ZUJ8 NextBio:20891038 Uniprot:Q7ZUJ8
Length = 205
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 116/205 (56%), Positives = 157/205 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDM+P++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>UNIPROTKB|E2QX17 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02735
OMA:MVSNLLY CTD:5691 GeneTree:ENSGT00550000074820 EMBL:AAEX03006484
RefSeq:NP_001239086.1 UniGene:Cfa.40500 Ensembl:ENSCAFT00000026270
GeneID:480537 KEGG:cfa:480537 NextBio:20855544 Uniprot:E2QX17
Length = 205
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 117/205 (57%), Positives = 155/205 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>MGI|MGI:1347014 [details] [associations]
symbol:Psmb3 "proteasome (prosome, macropain) subunit, beta
type 3" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=ISO] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
MGI:MGI:1347014 GO:GO:0005829 GO:GO:0005634 GO:GO:0004175
GO:GO:0030163 Reactome:REACT_102124 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 eggNOG:COG0638 PDB:3UNB PDB:3UNE PDB:3UNF
PDB:3UNH PDBsum:3UNB PDBsum:3UNE PDBsum:3UNF PDBsum:3UNH
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY CTD:5691
GeneTree:ENSGT00550000074820 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:AF060092 EMBL:AK002331 EMBL:BC014783 IPI:IPI00314467
RefSeq:NP_036101.1 UniGene:Mm.21874 ProteinModelPortal:Q9R1P1
SMR:Q9R1P1 IntAct:Q9R1P1 STRING:Q9R1P1 PhosphoSite:Q9R1P1
REPRODUCTION-2DPAGE:Q9R1P1 UCD-2DPAGE:Q9R1P1 PaxDb:Q9R1P1
PRIDE:Q9R1P1 Ensembl:ENSMUST00000103147 GeneID:26446 KEGG:mmu:26446
InParanoid:Q9R1P1 NextBio:304541 Bgee:Q9R1P1 Genevestigator:Q9R1P1
GermOnline:ENSMUSG00000069379 Uniprot:Q9R1P1
Length = 205
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 116/205 (56%), Positives = 155/205 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>RGD|61875 [details] [associations]
symbol:Psmb3 "proteasome (prosome, macropain) subunit, beta type
3" species:10116 "Rattus norvegicus" [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA;ISO;ISS] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
EMBL:D21800 RGD:61875 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 eggNOG:COG0638 MEROPS:T01.983
HOGENOM:HOG000090523 CTD:5691 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:BC084723 IPI:IPI00214889 PIR:S40468 RefSeq:NP_058981.1
UniGene:Rn.94551 ProteinModelPortal:P40112 SMR:P40112 IntAct:P40112
STRING:P40112 PhosphoSite:P40112 World-2DPAGE:0004:P40112
PRIDE:P40112 GeneID:29676 KEGG:rno:29676 UCSC:RGD:61875
InParanoid:P40112 NextBio:610015 ArrayExpress:P40112
Genevestigator:P40112 GermOnline:ENSRNOG00000012938 Uniprot:P40112
Length = 205
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 116/205 (56%), Positives = 155/205 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>UNIPROTKB|P40112 [details] [associations]
symbol:Psmb3 "Proteasome subunit beta type-3" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 EMBL:D21800 RGD:61875
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 eggNOG:COG0638 MEROPS:T01.983
HOGENOM:HOG000090523 CTD:5691 HOVERGEN:HBG004446 OrthoDB:EOG4XH012
EMBL:BC084723 IPI:IPI00214889 PIR:S40468 RefSeq:NP_058981.1
UniGene:Rn.94551 ProteinModelPortal:P40112 SMR:P40112 IntAct:P40112
STRING:P40112 PhosphoSite:P40112 World-2DPAGE:0004:P40112
PRIDE:P40112 GeneID:29676 KEGG:rno:29676 UCSC:RGD:61875
InParanoid:P40112 NextBio:610015 ArrayExpress:P40112
Genevestigator:P40112 GermOnline:ENSRNOG00000012938 Uniprot:P40112
Length = 205
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 116/205 (56%), Positives = 155/205 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>UNIPROTKB|P33672 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 eggNOG:COG0638 PDB:1IRU
PDBsum:1IRU MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
EMBL:BC102554 IPI:IPI00705755 PIR:A42762 PIR:B42762 PIR:C42762
PIR:D42762 PIR:G42762 RefSeq:NP_001029768.1 UniGene:Bt.44351
ProteinModelPortal:P33672 SMR:P33672 STRING:P33672 PRIDE:P33672
Ensembl:ENSBTAT00000004984 GeneID:533874 KEGG:bta:533874 CTD:5691
GeneTree:ENSGT00550000074820 HOVERGEN:HBG004446 InParanoid:P33672
OrthoDB:EOG4XH012 EvolutionaryTrace:P33672 NextBio:20876178
ArrayExpress:P33672 Uniprot:P33672
Length = 205
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 117/205 (57%), Positives = 155/205 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>FB|FBgn0026380 [details] [associations]
symbol:Prosbeta3 "Proteasome beta3 subunit" species:7227
"Drosophila melanogaster" [GO:0005839 "proteasome core complex"
evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS;NAS] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=NAS] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0022008 GO:GO:0006974 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 eggNOG:COG0638 MEROPS:T01.983 OMA:MVSNLLY
GeneTree:ENSGT00550000074820 EMBL:AF116898 EMBL:AM294562
EMBL:AM294563 EMBL:AM294564 EMBL:AM294565 EMBL:AM294566
EMBL:AM294567 EMBL:AM294568 EMBL:AM294569 EMBL:AY095029
RefSeq:NP_649858.1 UniGene:Dm.6972 ProteinModelPortal:Q9XYN7
SMR:Q9XYN7 DIP:DIP-18901N IntAct:Q9XYN7 MINT:MINT-306832
STRING:Q9XYN7 PaxDb:Q9XYN7 PRIDE:Q9XYN7 EnsemblMetazoa:FBtr0082010
GeneID:41079 KEGG:dme:Dmel_CG11981 CTD:41079 FlyBase:FBgn0026380
InParanoid:Q9XYN7 OrthoDB:EOG48PK28 PhylomeDB:Q9XYN7
GenomeRNAi:41079 NextBio:822046 Bgee:Q9XYN7 GermOnline:CG11981
Uniprot:Q9XYN7
Length = 205
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 111/205 (54%), Positives = 150/205 (73%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R G+Q QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE ++KPD+EPD+LFE ++Q+++++ DRD +
Sbjct: 121 ICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I ER LK RMD
Sbjct: 181 SGWGATVYIIEKDKITERTLKTRMD 205
>CGD|CAL0003796 [details] [associations]
symbol:PUP3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 CGD:CAL0003796
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 EMBL:AACQ01000187 KO:K02735 HOGENOM:HOG000090523
RefSeq:XP_711676.1 RefSeq:XP_888947.1 ProteinModelPortal:Q59PQ2
SMR:Q59PQ2 STRING:Q59PQ2 GeneID:3646718 GeneID:3703906
KEGG:cal:CaO19.1336 KEGG:cal:CaO19_1336 Uniprot:Q59PQ2
Length = 206
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 109/199 (54%), Positives = 154/199 (77%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F++I + D+ F+GL+GLATD +L +
Sbjct: 8 NGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVISLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER+++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + + DF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYIVT ++ +R+LK R D
Sbjct: 188 VYIVTKDKVIKRVLKTRQD 206
>UNIPROTKB|J9NTB8 [details] [associations]
symbol:PSMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0005839 "proteasome
core complex" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 OMA:SIMAYNG
GeneTree:ENSGT00550000074820 EMBL:AAEX03008503
Ensembl:ENSCAFT00000004875 Uniprot:J9NTB8
Length = 204
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 111/205 (54%), Positives = 149/205 (72%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCMAIAADRRFGIQAQMVTTDFQ-IFPMGDRLYIGLAGLATDV 59
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q + Q L FR LY+L+E + +KP T S+V+ LLYEKRFGPY+ +PVI GL + KPF
Sbjct: 60 QAVAQCLKFRLNLYELKEGQQIKPYTLMSMVANLLYEKRFGPYYTEPVITGLDPKTFKPF 119
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFE +SQA+L++VDRD +
Sbjct: 120 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFENISQAMLNAVDRDAV 179
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK MD
Sbjct: 180 SGMGVIVHIIEKDKITTRTLKAHMD 204
>RGD|1564425 [details] [associations]
symbol:RGD1564425 "similar to Proteasome subunit beta type 3
(Proteasome theta chain)" species:10116 "Rattus norvegicus"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227
PROSITE:PS51476 RGD:1564425 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02735 GeneTree:ENSGT00550000074820
OrthoDB:EOG4XH012 IPI:IPI00779993 RefSeq:XP_001081206.1
RefSeq:XP_215842.2 Ensembl:ENSRNOT00000058238 GeneID:296169
KEGG:rno:296169 UCSC:RGD:1564425 CTD:296169 NextBio:640734
Uniprot:D3Z8J0
Length = 205
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 104/205 (50%), Positives = 145/205 (70%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+ A GKNC AIA+DR +Q Q + TDFQ+I + RL+I L+GL TD
Sbjct: 1 MSIMSYNGGAITATKGKNCVAIAADRHFRIQAQMVTTDFQKIFPMGYRLYIDLAGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E + +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQHLKFRLNLYELKEGQQIKPYTLLSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+++ + LFET+SQA+L++VD+D +
Sbjct: 121 ICSLDLIGCSMVTNDFVVSGTCSEQMYGMCESLWEPNVDLEHLFETISQAMLNAVDQDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
S G V+I+ +I R LK +MD
Sbjct: 181 SSMGVIVHIIEKDKITTRKLKAQMD 205
>WB|WBGene00003949 [details] [associations]
symbol:pbs-3 species:6239 "Caenorhabditis elegans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0040011 GO:GO:0000003 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 EMBL:FO081756 eggNOG:COG0638
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
GeneTree:ENSGT00550000074820 PIR:T26649 RefSeq:NP_494913.1
ProteinModelPortal:Q23237 SMR:Q23237 DIP:DIP-25063N IntAct:Q23237
MINT:MINT-211266 STRING:Q23237 PaxDb:Q23237
EnsemblMetazoa:Y38A8.2.1 EnsemblMetazoa:Y38A8.2.2 GeneID:173858
KEGG:cel:CELE_Y38A8.2 UCSC:Y38A8.2.1 CTD:173858 WormBase:Y38A8.2
InParanoid:Q23237 NextBio:881425 Uniprot:Q23237
Length = 204
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 93/204 (45%), Positives = 141/204 (69%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD S
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY +T ++ +K RMD
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204
>UNIPROTKB|Q23237 [details] [associations]
symbol:pbs-3 "Proteasome subunit beta type-3" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0040011 GO:GO:0000003 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02735 EMBL:FO081756 eggNOG:COG0638
MEROPS:T01.983 HOGENOM:HOG000090523 OMA:MVSNLLY
GeneTree:ENSGT00550000074820 PIR:T26649 RefSeq:NP_494913.1
ProteinModelPortal:Q23237 SMR:Q23237 DIP:DIP-25063N IntAct:Q23237
MINT:MINT-211266 STRING:Q23237 PaxDb:Q23237
EnsemblMetazoa:Y38A8.2.1 EnsemblMetazoa:Y38A8.2.2 GeneID:173858
KEGG:cel:CELE_Y38A8.2 UCSC:Y38A8.2.1 CTD:173858 WormBase:Y38A8.2
InParanoid:Q23237 NextBio:881425 Uniprot:Q23237
Length = 204
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 93/204 (45%), Positives = 141/204 (69%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD S
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY +T ++ +K RMD
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204
>SGD|S000000896 [details] [associations]
symbol:PUP3 "Beta 3 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0061133 "endopeptidase
activator activity" evidence=IGI] [GO:0004175 "endopeptidase
activity" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IC] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019774 "proteasome core
complex, beta-subunit complex" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IC] [GO:0034515
"proteasome storage granule" evidence=IC] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
SGD:S000000896 GO:GO:0005634 GO:GO:0043161 GO:GO:0005789
EMBL:BK006939 GO:GO:0061133 EMBL:U18839 GO:GO:0010499 PDB:1VSY
PDB:3L5Q PDBsum:1VSY PDBsum:3L5Q GO:GO:0004298 KO:K00948
RefSeq:NP_011025.3 GeneID:856836 KEGG:sce:YER099C
RefSeq:NP_011020.3 GeneID:856830 KEGG:sce:YER094C KO:K02735
GO:GO:0034515 PDB:4G4S PDBsum:4G4S PDB:4B4T PDBsum:4B4T
eggNOG:COG0638 PDB:1FNT PDB:1G0U PDB:1G65 PDB:1JD2 PDB:1RYP
PDB:1Z7Q PDB:2F16 PDB:2FAK PDB:2GPL PDB:2ZCY PDB:3BDM PDB:3D29
PDB:3DY3 PDB:3DY4 PDB:3E47 PDB:3GPJ PDB:3GPT PDB:3GPW PDB:3HYE
PDB:3MG0 PDB:3MG4 PDB:3MG6 PDB:3MG7 PDB:3MG8 PDB:3NZJ PDB:3NZW
PDB:3NZX PDB:3OEU PDB:3OEV PDB:3OKJ PDB:3SDI PDB:3SDK PDB:3SHJ
PDB:3TDD PDB:3UN4 PDB:3UN8 PDB:4FZC PDB:4FZG PDB:4GK7 PDBsum:1FNT
PDBsum:1G0U PDBsum:1G65 PDBsum:1JD2 PDBsum:1RYP PDBsum:1Z7Q
PDBsum:2F16 PDBsum:2FAK PDBsum:2GPL PDBsum:2ZCY PDBsum:3BDM
PDBsum:3D29 PDBsum:3DY3 PDBsum:3DY4 PDBsum:3E47 PDBsum:3GPJ
PDBsum:3GPT PDBsum:3GPW PDBsum:3HYE PDBsum:3MG0 PDBsum:3MG4
PDBsum:3MG6 PDBsum:3MG7 PDBsum:3MG8 PDBsum:3NZJ PDBsum:3NZW
PDBsum:3NZX PDBsum:3OEU PDBsum:3OEV PDBsum:3OKJ PDBsum:3SDI
PDBsum:3SDK PDBsum:3SHJ PDBsum:3TDD PDBsum:3UN4 PDBsum:3UN8
PDBsum:4FZC PDBsum:4FZG PDBsum:4GK7 GO:GO:0019774
HOGENOM:HOG000090523 OMA:MVSNLLY GeneTree:ENSGT00550000074820
OrthoDB:EOG46QB2N EMBL:M88470 PIR:S29251 ProteinModelPortal:P25451
SMR:P25451 DIP:DIP-2039N IntAct:P25451 MINT:MINT-498393
STRING:P25451 PaxDb:P25451 PeptideAtlas:P25451 EnsemblFungi:YER094C
CYGD:YER094c EvolutionaryTrace:P25451 NextBio:983127
Genevestigator:P25451 GermOnline:YER094C Uniprot:P25451
Length = 205
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 101/199 (50%), Positives = 144/199 (72%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG++ + KPFI D
Sbjct: 67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ E+ +R LK R D
Sbjct: 187 VYIIKKDEVVKRYLKMRQD 205
>UNIPROTKB|F1LWQ7 [details] [associations]
symbol:F1LWQ7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 GeneTree:ENSGT00550000074820
IPI:IPI00560877 Ensembl:ENSRNOT00000032067 Uniprot:F1LWQ7
Length = 191
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 97/203 (47%), Positives = 133/203 (65%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC IA+DR G+Q Q + TDFQ+I + DRL+IGL+ LATD Q
Sbjct: 2 SIMSYNGGAVMAMKGKNCVVIAADRCFGIQAQMVTTDFQKIFSMGDRLYIGLASLATDIQ 61
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+ QRL FR+ LY+L+E R +KP T S+V+ LLYEK FGPY+ +PVIAGL + K F
Sbjct: 62 TVAQRLKFRN-LYELKEGRQIKPYTLLSMVANLLYEKWFGPYYTEPVIAGL--DPKTFAL 118
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
IG + DF E +YG CE++++ +P+ FET+SQA+L++VD D +S
Sbjct: 119 ----IGCPMVTDDF-----RSEQMYGMCESLWETSTDPEH-FETISQAVLNAVDGDAISS 168
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
G +I+ ++ R LK RMD
Sbjct: 169 MGVIAHIIEKDKLTTRTLKTRMD 191
>UNIPROTKB|J3QKR3 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
EMBL:AC006449 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HGNC:HGNC:9540 ChiTaRS:PSMB3 Ensembl:ENST00000579088 Uniprot:J3QKR3
Length = 145
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 85/143 (59%), Positives = 108/143 (75%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYG 147
IG + DFVV+GT E +YG
Sbjct: 123 LIGCPMVTDDFVVSGTCAEQMYG 145
>UNIPROTKB|D4AAA1 [details] [associations]
symbol:D4AAA1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 OrthoDB:EOG4XH012 IPI:IPI00559936
Ensembl:ENSRNOT00000050256 Uniprot:D4AAA1
Length = 193
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 91/205 (44%), Positives = 134/205 (65%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++ M GKNC AIA++R G+Q Q + DF +I I DRL+IGL+ LA D
Sbjct: 1 MSIMSYNGG-IMTMKGKNCMAIAAERHSGIQAQMVTMDFHKIFPIGDRLYIGLACLA-DI 58
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L +E++ +KP T S+V+ L YEK+FGPY+ + VIAGL + K F
Sbjct: 59 QTVAQCL---------KEDQQIKPYTLTSMVANLTYEKQFGPYYTESVIAGLDPKTFKAF 109
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++ IG + DF+V+ T E +YG CE+++KP+M+P+ LFET+S ++++D+D +
Sbjct: 110 ICSLALIGCPMVTDDFMVSDTCSEQMYGMCESLWKPNMDPECLFETIS-GHVNTLDQDAI 168
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V I+ +I R+LK +MD
Sbjct: 169 SGMGIIVQIIEKDKISTRLLKAQMD 193
>UNIPROTKB|F1M8Y7 [details] [associations]
symbol:F1M8Y7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 IPI:IPI00392056
Ensembl:ENSRNOT00000034715 OMA:CENIFPL Uniprot:F1M8Y7
Length = 128
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 74/128 (57%), Positives = 92/128 (71%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+SI YNG AL AM GKNC AIA+DRR G+Q Q + TDFQ+I + RL+IGL+ LATD
Sbjct: 1 LSIMSYNGGALKAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGGRLYIGLASLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E R MKP T S+V+ LLYEK FG Y+ +PVIAGL + KPF
Sbjct: 61 QTVAQHLKFRLNLYELKEGRQMKPYTLMSMVANLLYEKWFGLYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIG 127
IC++D G
Sbjct: 121 ICSLDLTG 128
>UNIPROTKB|F1M8D0 [details] [associations]
symbol:F1M8D0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 IPI:IPI00558181
Ensembl:ENSRNOT00000005923 OMA:MSTVANL Uniprot:F1M8D0
Length = 188
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 86/202 (42%), Positives = 120/202 (59%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A M GKNC R Q Q + TDFQ+I + DRL IGL+GLATD Q
Sbjct: 2 SIMSYNGGA---MKGKNCVTDYQCR----QAQMVTTDFQKIFPMGDRLCIGLAGLATDVQ 54
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ Q L FR LY+L+E R +KP T S V+ LL+E RF PY+ +PV+A L + K FI
Sbjct: 55 TVAQHLKFRLNLYELKESRQIKPYTLMSTVANLLHETRFSPYYTEPVMASLDPKTFKSFI 114
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C++ IG + DFVV+GT E +YG+ +++P+ +P+ + LL+++D D +S
Sbjct: 115 CSLALIGCPMVTDDFVVSGTCSEQMYGS---LWEPNFDPEHI-------LLNAMDGDAIS 164
Query: 181 GWGGHVYIVTPTEIKERILKGR 202
V+I+ +I R LK R
Sbjct: 165 VMVVIVHIIEKDKITTRALKAR 186
>UNIPROTKB|J3KRR2 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
EMBL:AC006449 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HGNC:HGNC:9540 ChiTaRS:PSMB3 ProteinModelPortal:J3KRR2
Ensembl:ENST00000579729 Uniprot:J3KRR2
Length = 112
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/99 (61%), Positives = 76/99 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKR
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKR 99
>UNIPROTKB|J3KSM3 [details] [associations]
symbol:PSMB3 "Proteasome subunit beta type-3" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
EMBL:AC006449 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HGNC:HGNC:9540 ChiTaRS:PSMB3 ProteinModelPortal:J3KSM3
Ensembl:ENST00000584662 Uniprot:J3KSM3
Length = 107
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/99 (61%), Positives = 76/99 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKR
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKR 99
>UNIPROTKB|Q58634 [details] [associations]
symbol:psmB "Proteasome subunit beta" species:243232
"Methanocaldococcus jannaschii DSM 2661" [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0010498 "proteasomal protein catabolic
process" evidence=IDA] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=IDA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR019983
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005737 GO:GO:0004175 GO:GO:0010498
EMBL:L77117 GenomeReviews:L77117_GR GO:GO:0004298 eggNOG:COG0638
PDB:3H4P PDBsum:3H4P GO:GO:0019774 MEROPS:T01.002 KO:K03433
HAMAP:MF_02113_A TIGRFAMs:TIGR03634 PIR:D64454 RefSeq:NP_248232.1
ProteinModelPortal:Q58634 SMR:Q58634 GeneID:1452133
KEGG:mja:MJ_1237 OMA:EKIWKID ProtClustDB:CLSK876502
EvolutionaryTrace:Q58634 Uniprot:Q58634
Length = 224
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 49/188 (26%), Positives = 95/188 (50%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ KLY++R R++ P A+L+S +L+ R P+ Q +I G + + ++D +G
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLG 125
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
K F G+ YG EA + DM +E + AL S+++RD SG G +
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLA 185
Query: 188 IVTPTEIK 195
++T +K
Sbjct: 186 VITKDGVK 193
>UNIPROTKB|P20618 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type-1" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 DrugBank:DB00188 GO:GO:0005839 GO:GO:0004298
EMBL:AL031259 eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
OMA:YDPIGHC EMBL:D00761 EMBL:BT019720 EMBL:AB451312 EMBL:AB451442
EMBL:BC000508 EMBL:BC020807 IPI:IPI00025019 PIR:S15973
RefSeq:NP_002784.1 UniGene:Hs.352768 ProteinModelPortal:P20618
SMR:P20618 IntAct:P20618 MINT:MINT-3009312 STRING:P20618
PhosphoSite:P20618 DMDM:130853 REPRODUCTION-2DPAGE:IPI00025019
UCD-2DPAGE:P20618 PaxDb:P20618 PeptideAtlas:P20618 PRIDE:P20618
DNASU:5689 Ensembl:ENST00000262193 GeneID:5689 KEGG:hsa:5689
UCSC:uc003qxr.3 GeneCards:GC06M170844 HGNC:HGNC:9537 HPA:CAB033911
HPA:HPA029635 HPA:HPA029637 MIM:602017 neXtProt:NX_P20618
PharmGKB:PA33882 InParanoid:P20618 PhylomeDB:P20618
BindingDB:P20618 ChEMBL:CHEMBL4208 ChiTaRS:PSMB1 GenomeRNAi:5689
NextBio:22098 Bgee:P20618 CleanEx:HS_PSMB1 Genevestigator:P20618
GermOnline:ENSG00000008018 Uniprot:P20618
Length = 241
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 59/208 (28%), Positives = 98/208 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P D V +S+ +R
Sbjct: 155 VGSYQ-RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + IVT I+E + R D
Sbjct: 214 DVYTGDALRICIVTKEGIREETVSLRKD 241
>UNIPROTKB|G5E589 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 UniGene:Bt.7040
GeneTree:ENSGT00550000075035 OMA:YDPIGHC EMBL:DAAA02027595
Ensembl:ENSBTAT00000010108 Uniprot:G5E589
Length = 241
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 60/208 (28%), Positives = 98/208 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P D V +S+ +R
Sbjct: 155 VGSYQ-RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G V IVT I+E + R D
Sbjct: 214 DVYTGDALKVCIVTKEGIREETVPLRKD 241
>MGI|MGI:104884 [details] [associations]
symbol:Psmb1 "proteasome (prosome, macropain) subunit, beta
type 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 MGI:MGI:104884 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_102124 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 PDB:3UNB PDB:3UNE PDB:3UNF PDB:3UNH PDBsum:3UNB
PDBsum:3UNE PDBsum:3UNF PDBsum:3UNH HOVERGEN:HBG000961
MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732 CTD:5689
OrthoDB:EOG4PG61P ChiTaRS:PSMB1 EMBL:U60824 EMBL:X80686
EMBL:AK077520 EMBL:BC018351 IPI:IPI00113845 RefSeq:NP_035315.1
UniGene:Mm.32912 ProteinModelPortal:O09061 SMR:O09061 IntAct:O09061
STRING:O09061 PhosphoSite:O09061 PaxDb:O09061 PRIDE:O09061
Ensembl:ENSMUST00000014913 GeneID:19170 KEGG:mmu:19170
InParanoid:O09061 OMA:EARYYQF NextBio:295838 Bgee:O09061
Genevestigator:O09061 GermOnline:ENSMUSG00000014769 Uniprot:O09061
Length = 240
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 59/208 (28%), Positives = 98/208 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P D V +S+ +R
Sbjct: 154 VGSYQ-RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAER 212
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + IVT I+E + R D
Sbjct: 213 DVYTGDALRICIVTKEGIREETVPLRKD 240
>UNIPROTKB|Q6PDW4 [details] [associations]
symbol:Psmb1 "Proteasome subunit beta type" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 RGD:621092
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 EMBL:CH474033 HOVERGEN:HBG000961 MEROPS:T01.986
GeneTree:ENSGT00550000075035 HSSP:P23724 OMA:EARYYQF
IPI:IPI00191749 UniGene:Rn.6016 EMBL:BC058455 SMR:Q6PDW4
STRING:Q6PDW4 Ensembl:ENSRNOT00000002037 InParanoid:Q6PDW4
Genevestigator:Q6PDW4 Uniprot:Q6PDW4
Length = 240
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 59/208 (28%), Positives = 98/208 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P D V +S+ +R
Sbjct: 154 VGSYQ-RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAER 212
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + IVT I+E + R D
Sbjct: 213 DVYTGDALRICIVTKEGIREETVPLRKD 240
>UNIPROTKB|I3LQ51 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02732 CTD:5689
GeneTree:ENSGT00550000075035 OMA:YDPIGHC RefSeq:NP_001231282.1
UniGene:Ssc.871 Ensembl:ENSSSCT00000023500 GeneID:100621969
KEGG:ssc:100621969 Uniprot:I3LQ51
Length = 241
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 58/208 (27%), Positives = 98/208 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P D V +S+ +R
Sbjct: 155 VGSYQ-RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + IVT ++E + R D
Sbjct: 214 DVYTGDALRICIVTKEGVREETVPLRKD 241
>RGD|621092 [details] [associations]
symbol:Psmb1 "proteasome (prosome, macropain) subunit, beta type
1" species:10116 "Rattus norvegicus" [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA;ISO;ISS] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
RGD:621092 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
EMBL:X52783 IPI:IPI00191749 PIR:S09696 RefSeq:NP_446042.1
UniGene:Rn.6016 ProteinModelPortal:P18421 SMR:P18421 IntAct:P18421
STRING:P18421 PhosphoSite:P18421 PRIDE:P18421 GeneID:94198
KEGG:rno:94198 UCSC:RGD:621092 InParanoid:P18421 NextBio:617862
ArrayExpress:P18421 Genevestigator:P18421
GermOnline:ENSRNOG00000001488 Uniprot:P18421
Length = 240
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 59/208 (28%), Positives = 98/208 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P D V +S+ +R
Sbjct: 154 VGSYQ-RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAER 212
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + IVT I+E + R D
Sbjct: 213 DVYTGDALRICIVTKEGIREETVPLRKD 240
>UNIPROTKB|Q6JLB2 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9031
"Gallus gallus" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
GeneTree:ENSGT00550000075035 OMA:YDPIGHC HSSP:P23724
EMBL:AADN02035631 EMBL:AY376311 IPI:IPI00583929
RefSeq:NP_001007906.1 UniGene:Gga.4653 SMR:Q6JLB2 STRING:Q6JLB2
Ensembl:ENSGALT00000018217 GeneID:421551 KEGG:gga:421551
InParanoid:Q6JLB2 NextBio:20824303 Uniprot:Q6JLB2
Length = 237
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 56/208 (26%), Positives = 102/208 (49%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + ++ ++ IG SG D TL +
Sbjct: 31 FNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P ++ + V +S+ +R
Sbjct: 151 VGSYQ-RDSFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVFISAAER 209
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + +VT IKE ++ R D
Sbjct: 210 DVYTGDALKICVVTKDGIKEETIQLRKD 237
>TAIR|locus:2101846 [details] [associations]
symbol:PBF1 species:3702 "Arabidopsis thaliana"
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008233 "peptidase activity"
evidence=ISS] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0048046 "apoplast"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0005839 "proteasome core complex" evidence=TAS]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0009817 GO:GO:0000502
EMBL:AL162295 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 MEROPS:T01.986 EMBL:X67338 EMBL:X79806 EMBL:AF043537
EMBL:AY062790 EMBL:AY081571 EMBL:AY086619 EMBL:AK220787 EMBL:Z26405
IPI:IPI00529170 PIR:T47893 RefSeq:NP_001190146.1 RefSeq:NP_191641.1
UniGene:At.20500 UniGene:At.48789 ProteinModelPortal:P42742
SMR:P42742 IntAct:P42742 STRING:P42742 PaxDb:P42742 PRIDE:P42742
EnsemblPlants:AT3G60820.1 EnsemblPlants:AT3G60820.3 GeneID:825253
KEGG:ath:AT3G60820 TAIR:At3g60820 HOGENOM:HOG000091081
InParanoid:P42742 KO:K02732 PhylomeDB:P42742
ProtClustDB:CLSN2685215 Genevestigator:P42742 Uniprot:P42742
Length = 223
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 43/124 (34%), Positives = 66/124 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L +
Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>UNIPROTKB|Q2TBX6 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type-1" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 PDB:1IRU PDBsum:1IRU
HOVERGEN:HBG000961 MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732
EMBL:BC109494 IPI:IPI00722440 RefSeq:NP_001033628.1 UniGene:Bt.7040
ProteinModelPortal:Q2TBX6 SMR:Q2TBX6 STRING:Q2TBX6 PRIDE:Q2TBX6
GeneID:514237 KEGG:bta:514237 CTD:5689 InParanoid:Q2TBX6
OrthoDB:EOG4PG61P EvolutionaryTrace:Q2TBX6 NextBio:20871244
Uniprot:Q2TBX6
Length = 241
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 59/208 (28%), Positives = 97/208 (46%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK--PDME--P---DELFETVSQALLSSVDR 176
+G+ + F G+A L + FK ++E P D V +S+ +R
Sbjct: 155 VGSYQ-RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G V IVT I+ + R D
Sbjct: 214 DVYTGDALKVCIVTKEGIRGETVPLRKD 241
>UNIPROTKB|Q9IB83 [details] [associations]
symbol:psmb1-B "Proteasome subunit beta type-1-B"
species:7957 "Carassius auratus" [GO:0005839 "proteasome core
complex" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOVERGEN:HBG000961 EMBL:AB035497
ProteinModelPortal:Q9IB83 SMR:Q9IB83 MEROPS:T01.986 PRIDE:Q9IB83
Uniprot:Q9IB83
Length = 237
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 57/209 (27%), Positives = 101/209 (48%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FKPDME-----P---DELFETVSQALLSSVD 175
+G+ + + G+A L + FK +ME P ++ + V +S+ +
Sbjct: 151 VGSYQ-RDTYKAGGSASAMLQPLLDNQIGFK-NMENVEQVPLSQEKAVQLVKDVFISAAE 208
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + I+T I+E I+ R D
Sbjct: 209 RDVYTGDALKICIITKEGIREEIVPLRKD 237
>UNIPROTKB|Q9IB84 [details] [associations]
symbol:psmb1-A "Proteasome subunit beta type-1-A"
species:7957 "Carassius auratus" [GO:0005839 "proteasome core
complex" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 EMBL:AB035496 ProteinModelPortal:Q9IB84 SMR:Q9IB84
PRIDE:Q9IB84 HOVERGEN:HBG000961 Uniprot:Q9IB84
Length = 238
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 57/209 (27%), Positives = 101/209 (48%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 32 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 92 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 151
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FKPDME-----P---DELFETVSQALLSSVD 175
+G+ + + G+A L + FK +ME P ++ + V +S+ +
Sbjct: 152 VGSYQ-RDTYKAGGSASAMLQPLLDNQIGFK-NMENVEQVPLSQEKAVQLVKDVFISAAE 209
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + I+T I+E I+ R D
Sbjct: 210 RDVYTGDALKICIITKEGIREEIVPLRKD 238
>ZFIN|ZDB-GENE-040618-2 [details] [associations]
symbol:psmb1 "proteasome (prosome, macropain)
subunit, beta type, 1" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 ZFIN:ZDB-GENE-040618-2
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOVERGEN:HBG000961 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 CTD:5689 OrthoDB:EOG4PG61P
GeneTree:ENSGT00550000075035 OMA:YDPIGHC EMBL:BX323887
EMBL:BC085580 EMBL:AY648806 IPI:IPI00483526 RefSeq:NP_001003889.1
UniGene:Dr.76303 SMR:Q6DRF3 STRING:Q6DRF3
Ensembl:ENSDART00000007231 GeneID:445413 KEGG:dre:445413
InParanoid:Q6DRF3 NextBio:20832117 Uniprot:Q6DRF3
Length = 237
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 58/209 (27%), Positives = 101/209 (48%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FKPDME-----P---DELFETVSQALLSSVD 175
+G+ + + G+A L + FK +ME P ++ + V +S+ +
Sbjct: 151 VGSYQ-RDTYKAGGSASAMLQPLLDNQIGFK-NMENVEHVPLTQEKAVQLVKDVFISAAE 208
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G V IV+ IKE I+ R D
Sbjct: 209 RDVYTGDALKVCIVSKEGIKEEIVPLRKD 237
>UNIPROTKB|I3LCC6 [details] [associations]
symbol:PSMB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] InterPro:IPR001353 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 GeneTree:ENSGT00550000074820
Ensembl:ENSSSCT00000031649 OMA:XGTCTEQ Uniprot:I3LCC6
Length = 67
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 34/66 (51%), Positives = 50/66 (75%)
Query: 139 GTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERI 198
GT E +YG CE++++PDM+P+ LFET+SQA+L++VDRD +SG G V+++ +I R
Sbjct: 2 GTCTEQMYGMCESLWEPDMDPEHLFETISQAMLNAVDRDAVSGMGVIVHVIEKDKITTRT 61
Query: 199 LKGRMD 204
LK RMD
Sbjct: 62 LKARMD 67
>UNIPROTKB|D4GYZ1 [details] [associations]
symbol:psmB "Proteasome subunit beta" species:309800
"Haloferax volcanii DS2" [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA] [GO:0019774 "proteasome core complex, beta-subunit
complex" evidence=IDA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR019983 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005737 GO:GO:0004175
GO:GO:0010498 GO:GO:0004298 EMBL:CP001956 GenomeReviews:CP001956_GR
GO:GO:0019774 EMBL:AF126262 PIR:T48677 RefSeq:YP_003535609.1
ProteinModelPortal:D4GYZ1 MEROPS:T01.002 PhosSite:P0611175
GeneID:8923965 KEGG:hvo:HVO_1562 HOGENOM:HOG000091083 KO:K03433
OMA:MRRNESM ProtClustDB:CLSK511252 HAMAP:MF_02113_A
TIGRFAMs:TIGR03634 Uniprot:D4GYZ1
Length = 243
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 49/183 (26%), Positives = 92/183 (50%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E F+ + +E ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>POMBASE|SPAC22F8.06 [details] [associations]
symbol:pam1 "20S proteasome complex subunit beta 6"
species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
PomBase:SPAC22F8.06 GO:GO:0005829 GO:GO:0005634 GO:GO:0007346
EMBL:CU329670 GO:GO:0043161 GenomeReviews:CU329670_GR GO:GO:0004298
eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732
OMA:YDPIGHC GO:GO:0019774 EMBL:AB012135 PIR:T38196
RefSeq:NP_594729.1 ProteinModelPortal:Q9UQY2 SMR:Q9UQY2
STRING:Q9UQY2 PRIDE:Q9UQY2 EnsemblFungi:SPAC22F8.06.1
GeneID:2542062 KEGG:spo:SPAC22F8.06 OrthoDB:EOG4PG98X
NextBio:20803136 Uniprot:Q9UQY2
Length = 225
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 47/125 (37%), Positives = 64/125 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG VA+ G +A D R V I T FQ R+ ++ D L IG SG D+ L +
Sbjct: 12 NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVK 70
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R LY ER M ++ A +V LLY KRF PY+ +AG+ E K I + D
Sbjct: 71 RIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDP 130
Query: 126 IGAKE 130
+G+ E
Sbjct: 131 VGSYE 135
>UNIPROTKB|O35522 [details] [associations]
symbol:Psmb9 "Proteasome subunit beta type-9" species:35531
"Mus musculus bactrianus" [GO:0005839 "proteasome core complex"
evidence=ISS] [GO:0019882 "antigen processing and presentation"
evidence=IMP;IDA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 MGI:MGI:1346526 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0019882 GO:GO:0005839
GO:GO:0004298 HOVERGEN:HBG000123 MEROPS:T01.013 UniGene:Mm.390983
EMBL:D44456 ProteinModelPortal:O35522 SMR:O35522 PRIDE:O35522
Uniprot:O35522
Length = 219
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 48/198 (24%), Positives = 95/198 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ L E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F ++G+ +YG +A +KP M P+E + A+ +++RD SG G
Sbjct: 135 MGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVILG 210
>UNIPROTKB|F1PF02 [details] [associations]
symbol:PSMB1 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
GeneTree:ENSGT00550000075035 EMBL:AAEX03008668
Ensembl:ENSCAFT00000028947 OMA:KMSCPAM Uniprot:F1PF02
Length = 189
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESL 145
+G+ + F G+A L
Sbjct: 155 VGSYQ-RDSFKAGGSASAML 173
>UNIPROTKB|O35521 [details] [associations]
symbol:Psmb9 "Proteasome subunit beta type-9"
species:254704 "Mus terricolor" [GO:0005839 "proteasome core
complex" evidence=ISS] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 MGI:MGI:1346526 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HOVERGEN:HBG000123 MEROPS:T01.013 EMBL:D44455
ProteinModelPortal:O35521 SMR:O35521 PRIDE:O35521 Uniprot:O35521
Length = 219
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 48/198 (24%), Positives = 94/198 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ L E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A +KP M P+E + A+ +++RD SG G
Sbjct: 135 MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVILG 210
>MGI|MGI:1346526 [details] [associations]
symbol:Psmb9 "proteasome (prosome, macropain) subunit, beta
type 9 (large multifunctional peptidase 2)" species:10090 "Mus
musculus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019882 "antigen processing and presentation" evidence=IMP;IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 MGI:MGI:1346526 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_102124 EMBL:AF100956 GO:GO:0051603
GO:GO:0019882 EMBL:U35323 EMBL:AF027865 GO:GO:0005839 GO:GO:0004298
PDB:3UNF PDB:3UNH PDBsum:3UNF PDBsum:3UNH HOGENOM:HOG000091079
GeneTree:ENSGT00510000046484 HOVERGEN:HBG000123 MEROPS:T01.013
CTD:5698 eggNOG:NOG291022 KO:K02741 OrthoDB:EOG47M200 EMBL:S59862
EMBL:U22448 EMBL:U22447 EMBL:S58203 EMBL:L11613 EMBL:U22919
EMBL:U22920 EMBL:D14566 EMBL:D44454 EMBL:D44457 EMBL:D44458
EMBL:D44460 EMBL:D44461 EMBL:D44462 EMBL:D43620 EMBL:AK008429
IPI:IPI00309379 PIR:JC2019 RefSeq:NP_038613.1 UniGene:Mm.390983
ProteinModelPortal:P28076 SMR:P28076 IntAct:P28076 STRING:P28076
PhosphoSite:P28076 PaxDb:P28076 PRIDE:P28076
Ensembl:ENSMUST00000174576 GeneID:16912 KEGG:mmu:16912
InParanoid:P28076 ChEMBL:CHEMBL1944491 NextBio:290956 Bgee:P28076
Genevestigator:P28076 GermOnline:ENSMUSG00000024337 Uniprot:P28076
Length = 219
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 48/198 (24%), Positives = 94/198 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ L E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A +KP M P+E + A+ +++RD SG G
Sbjct: 135 MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVILG 210
>FB|FBgn0002284 [details] [associations]
symbol:Prosbeta6 "Proteasome beta6 subunit" species:7227
"Drosophila melanogaster" [GO:0005839 "proteasome core complex"
evidence=ISS;NAS] [GO:0004175 "endopeptidase activity"
evidence=ISS;NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006508 "proteolysis" evidence=NAS] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 KO:K02732
GeneTree:ENSGT00550000075035 OMA:YDPIGHC EMBL:U00790 EMBL:AY051697
RefSeq:NP_524115.1 UniGene:Dm.2536 ProteinModelPortal:P40304
SMR:P40304 DIP:DIP-23672N IntAct:P40304 MINT:MINT-754870
STRING:P40304 PaxDb:P40304 EnsemblMetazoa:FBtr0075360 GeneID:39855
KEGG:dme:Dmel_CG4097 CTD:39855 FlyBase:FBgn0002284
InParanoid:P40304 OrthoDB:EOG4X3FHH PhylomeDB:P40304
GenomeRNAi:39855 NextBio:815727 Bgee:P40304 GermOnline:CG4097
Uniprot:P40304
Length = 235
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 55/211 (26%), Positives = 94/211 (44%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSS 173
IG E A + GTAG L + K + + S +S+
Sbjct: 146 PIGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+ R L R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>RGD|3427 [details] [associations]
symbol:Psmb9 "proteasome (prosome, macropain) subunit, beta type 9
(large multifunctional peptidase 2)" species:10116 "Rattus
norvegicus" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA;ISO] [GO:0019882 "antigen processing and presentation"
evidence=IEA;ISO] [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227
PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476 RGD:3427 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0019882 GO:GO:0005839 GO:GO:0004298
HOGENOM:HOG000091079 HOVERGEN:HBG000123 MEROPS:T01.013 CTD:5698
eggNOG:NOG291022 KO:K02741 OrthoDB:EOG47M200 EMBL:D10757
IPI:IPI00196819 PIR:JX0231 PIR:S09088 RefSeq:NP_036840.2
UniGene:Rn.13686 ProteinModelPortal:P28077 SMR:P28077 STRING:P28077
PRIDE:P28077 GeneID:24967 KEGG:rno:24967 UCSC:RGD:3427
InParanoid:P28077 NextBio:605004 ArrayExpress:P28077
Genevestigator:P28077 GermOnline:ENSRNOG00000000459 Uniprot:P28077
Length = 219
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 47/198 (23%), Positives = 94/198 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ L E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGLELEEPPLVLAAANIVKNISYKYR-EDLLAHLMVAGWDQHEGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A +KP M P+E + A+ +++RD SG G
Sbjct: 135 MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITADGVDHRVILG 210
>UNIPROTKB|Q6MGA6 [details] [associations]
symbol:Psmb9 "Proteasome subunit beta type" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 RGD:3427 GO:GO:0005634 GO:GO:0005737 EMBL:BX883043
GO:GO:0051603 GO:GO:0019882 EMBL:CH473988 GO:GO:0005839
GO:GO:0004298 GeneTree:ENSGT00510000046484 HOVERGEN:HBG000123
HSSP:P38624 CTD:5698 KO:K02741 RefSeq:NP_036840.2 UniGene:Rn.13686
GeneID:24967 KEGG:rno:24967 NextBio:605004 EMBL:BC091161
IPI:IPI00944815 SMR:Q6MGA6 STRING:Q6MGA6 Ensembl:ENSRNOT00000000532
InParanoid:Q6MGA6 OMA:GWDHREG Genevestigator:Q6MGA6 Uniprot:Q6MGA6
Length = 219
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 47/198 (23%), Positives = 94/198 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ L E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGLELEEPPLVLAAANIVKNISYKYR-EDLLAHLMVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A +KP M P+E + A+ +++RD SG G
Sbjct: 135 MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITADGVDHRVILG 210
>ZFIN|ZDB-GENE-001208-1 [details] [associations]
symbol:psmb11 "proteasome (prosome, macropain)
subunit, beta type, 11" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 ZFIN:ZDB-GENE-001208-1 GO:GO:0005634 GO:GO:0005737
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 CTD:122706
MEROPS:T01.010 HOGENOM:HOG000091079 KO:K02738
GeneTree:ENSGT00510000046484 HOVERGEN:HBG000123 HSSP:P38624
EMBL:FP074889 EMBL:BX510994 EMBL:AL672164 EMBL:AF155576
EMBL:BC076475 IPI:IPI00513422 RefSeq:NP_571751.1 UniGene:Dr.8210
STRING:Q9PUS6 Ensembl:ENSDART00000001359 GeneID:64279
KEGG:dre:64279 InParanoid:Q9PUS6 OMA:RIFCCMA OrthoDB:EOG47M1ZZ
NextBio:20901953 Uniprot:Q9PUS6
Length = 217
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 47/195 (24%), Positives = 95/195 (48%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 16 GTTILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKM 75
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
F+ + ++ E + AS++ L Y + + AG + P I + S+
Sbjct: 76 AKFQLSFHSIQMESPPLVKAAASIMRELCYSNK-EELRAGFITAGWDRKKGPQIYVV-SL 133
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G L++ F + G+ +YG +A FKPDM +E + + AL ++ RD +SG H+
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALALAMGRDNVSGGVVHL 193
Query: 187 YIVTPTEIKERILKG 201
++T +K ++ G
Sbjct: 194 VVITEAGVKHIVVPG 208
>UNIPROTKB|O35523 [details] [associations]
symbol:Psmb9 "Proteasome subunit beta type-9" species:10101
"Mus platythrix" [GO:0005839 "proteasome core complex"
evidence=ISS] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 HOVERGEN:HBG000123
MEROPS:T01.013 EMBL:D44459 ProteinModelPortal:O35523 SMR:O35523
Uniprot:O35523
Length = 219
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/198 (23%), Positives = 93/198 (46%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ L E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A +KP M +E + A+ +++RD SG G
Sbjct: 135 MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITVAGVDHRVILG 210
>UNIPROTKB|Q2PYM7 [details] [associations]
symbol:LMP2 "Proteasome subunit beta type" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOGENOM:HOG000091079 GeneTree:ENSGT00510000046484
HOVERGEN:HBG000123 MEROPS:T01.013 CTD:5698 KO:K02741 OMA:CRRFTTN
EMBL:BX323833 UniGene:Ssc.95136 UniGene:Ssc.12758
KEGG:ssc:100520085 KEGG:ssc:654294 EMBL:CU633196 EMBL:DQ295031
EMBL:DQ333333 EMBL:DQ659151 RefSeq:NP_001033050.1
RefSeq:XP_003128374.1 SMR:Q2PYM7 STRING:Q2PYM7
Ensembl:ENSSSCT00000001625 Ensembl:ENSSSCT00000032605
GeneID:100520085 GeneID:654294 Uniprot:Q2PYM7
Length = 219
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 46/198 (23%), Positives = 94/198 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHHRIYCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGMELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A +KP M P+E + A+ +++RD SG G
Sbjct: 135 MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMNRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVILG 210
>DICTYBASE|DDB_G0267390 [details] [associations]
symbol:psmB6 "proteasome subunit beta type 6"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IPI]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 dictyBase:DDB_G0267390 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000150_GR GO:GO:0006508 EMBL:AAFI02000003
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
MEROPS:T01.010 KO:K02738 OMA:NLGTSIM EMBL:AB007024 PIR:JE0101
RefSeq:XP_647188.1 HSSP:P38624 ProteinModelPortal:Q55GJ6 SMR:Q55GJ6
STRING:Q55GJ6 EnsemblProtists:DDB0191199 GeneID:8615992
KEGG:ddi:DDB_G0267390 ProtClustDB:CLSZ2431512 Uniprot:Q55GJ6
Length = 214
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 51/198 (25%), Positives = 93/198 (46%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL-- 63
G++++A+ + +D R G + T+ +I+ IH+R++ SG A D+Q +
Sbjct: 14 GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTN--KITPIHERIYCCRSGSAADTQAISD 71
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
Y R +L +E D+K T ASL L Y + ++AG + +
Sbjct: 72 YVRYYLEMHTSELCDEPDVK--TAASLFQLLCYSNK-NNLMAGIIVAGWDKHQGGSVYNI 128
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
S+G + + F + G+ +YG C++ FKP M DE E V +L ++ RD SG
Sbjct: 129 -SLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGV 187
Query: 184 GHVYIVTPTEIKERILKG 201
+ I+ ++ +++ G
Sbjct: 188 IRLCIIDKNGVERKMIPG 205
>UNIPROTKB|P28065 [details] [associations]
symbol:PSMB9 "Proteasome subunit beta type-9" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
EMBL:CH471081 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:X87344 EMBL:BX088556 EMBL:BX927138
EMBL:X66401 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
HOGENOM:HOG000091079 HOVERGEN:HBG000123 EMBL:AL669918 EMBL:AL935043
EMBL:CR762476 EMBL:CR753889 MEROPS:T01.013 CTD:5698 KO:K02741
OMA:CRRFTTN EMBL:X62741 EMBL:Z14977 EMBL:U01025 EMBL:S75169
EMBL:CR541656 EMBL:CR933844 EMBL:BC065513 IPI:IPI00000787
IPI:IPI00170899 PIR:A55632 PIR:S27332 RefSeq:NP_002791.1
UniGene:Hs.654585 ProteinModelPortal:P28065 SMR:P28065
IntAct:P28065 MINT:MINT-2802096 STRING:P28065 PhosphoSite:P28065
DMDM:417529 OGP:P28065 PaxDb:P28065 PRIDE:P28065 DNASU:5698
Ensembl:ENST00000374859 Ensembl:ENST00000383114
Ensembl:ENST00000383234 Ensembl:ENST00000422729
Ensembl:ENST00000427870 Ensembl:ENST00000434471
Ensembl:ENST00000444284 Ensembl:ENST00000453059 GeneID:5698
KEGG:hsa:5698 UCSC:uc003sga.3 GeneCards:GC06P032815
H-InvDB:HIX0166929 H-InvDB:HIX0207611 H-InvDB:HIX0207787
HGNC:HGNC:9546 HPA:CAB015180 MIM:177045 neXtProt:NX_P28065
PharmGKB:PA33891 InParanoid:P28065 PhylomeDB:P28065
ChEMBL:CHEMBL1944495 GenomeRNAi:5698 NextBio:22136
ArrayExpress:P28065 Bgee:P28065 CleanEx:HS_PSMB9
Genevestigator:P28065 GermOnline:ENSG00000204261 Uniprot:P28065
Length = 219
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 46/198 (23%), Positives = 93/198 (46%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H+R++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + F + G+ +YG +A +KP M P+E + A+ ++ RD SG G
Sbjct: 135 LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVILG 210
>UNIPROTKB|P28061 [details] [associations]
symbol:psmB "Proteasome subunit beta" species:273075
"Thermoplasma acidophilum DSM 1728" [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IDA] [GO:0010498 "proteasomal protein catabolic
process" evidence=IDA] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=IDA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR019983
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005737 GO:GO:0010498
GenomeReviews:AL139299_GR EMBL:AL445064 GO:GO:0004298 PDB:3IPM
PDBsum:3IPM eggNOG:COG0638 PDB:1PMA PDB:1YA7 PDB:1YAR PDB:1YAU
PDB:3C91 PDB:3C92 PDB:3JRM PDB:3JSE PDB:3JTL PDBsum:1PMA
PDBsum:1YA7 PDBsum:1YAR PDBsum:1YAU PDBsum:3C91 PDBsum:3C92
PDBsum:3JRM PDBsum:3JSE PDBsum:3JTL GO:GO:0019774 MEROPS:T01.002
HOGENOM:HOG000091083 KO:K03433 HAMAP:MF_02113_A TIGRFAMs:TIGR03634
OMA:EKIWKID EMBL:M83674 PIR:A42068 RefSeq:NP_394085.1
ProteinModelPortal:P28061 SMR:P28061 GeneID:1456195 KEGG:tac:Ta0612
ProtClustDB:CLSK227781 EvolutionaryTrace:P28061 Uniprot:P28061
Length = 211
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 46/191 (24%), Positives = 99/191 (51%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+ T G+ V + K+ +A++RR+ ++ + + +++ +I + ++GL D+
Sbjct: 1 MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + + +LY+L+ +M E A+L+S +L + ++ PY Q ++ G+ + P +
Sbjct: 61 QVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTAPHV 118
Query: 121 CTMDSIGAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
++D+ G +D + G+ +YG E+ + M DE + V +A+ ++ RD
Sbjct: 119 FSIDAAGGS--VEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSA 176
Query: 180 SGWGGHVYIVT 190
SG V ++T
Sbjct: 177 SGGMIDVAVIT 187
>UNIPROTKB|Q5W412 [details] [associations]
symbol:PSMB9 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0019882 "antigen processing
and presentation" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0019882 GO:GO:0005839 GO:GO:0004298 HOGENOM:HOG000091079
GeneTree:ENSGT00510000046484 HOVERGEN:HBG000123 EMBL:AJ630364
MEROPS:T01.013 CTD:5698 eggNOG:NOG291022 KO:K02741 OMA:CRRFTTN
OrthoDB:EOG47M200 EMBL:AAEX03008236 RefSeq:NP_001041551.1
UniGene:Cfa.14371 SMR:Q5W412 STRING:Q5W412
Ensembl:ENSCAFT00000043677 GeneID:474867 KEGG:cfa:474867
InParanoid:Q5W412 NextBio:20850811 Uniprot:Q5W412
Length = 209
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 44/196 (22%), Positives = 89/196 (45%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H ++ LSG A D+Q +
Sbjct: 8 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRAFNKLSPLHQHIYCALSGSAADAQAMAD 67
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ L E A++V + Y+ R +IAG D + +
Sbjct: 68 MAAYQLELHGLELEEPPLVLAAANVVRNISYKYR-EDLSAHLMIAGWDRRDGGQV--YGT 124
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + F + G+ +YG +A +KP M P+E + A+ +++RD SG H
Sbjct: 125 MGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRSFTTNAIALAMNRDGSSGGVIH 184
Query: 186 VYIVTPTEIKERILKG 201
+ +T + +++ G
Sbjct: 185 LVTITAAGVDYQVILG 200
>UNIPROTKB|A2ACR1 [details] [associations]
symbol:PSMB9 "Proteasome subunit beta type" species:9606
"Homo sapiens" [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0019882 "antigen processing and
presentation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 EMBL:CH471081 GO:GO:0051603
GO:GO:0019882 EMBL:BX927138 EMBL:CR752645 EMBL:AL671681
GO:GO:0005839 GO:GO:0004298 HOGENOM:HOG000091079 HOVERGEN:HBG000123
EMBL:AL669918 EMBL:AL935043 EMBL:CR753889 UniGene:Hs.654585
HGNC:HGNC:9546 IPI:IPI01015769 SMR:A2ACR1 Ensembl:ENST00000395330
Ensembl:ENST00000399371 Ensembl:ENST00000399607
Ensembl:ENST00000420182 Ensembl:ENST00000451862 Uniprot:A2ACR1
Length = 196
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 44/182 (24%), Positives = 86/182 (47%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+ SD R+ + F ++S +H+R++ LSG A D+Q + ++ +L+ + E
Sbjct: 11 MGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEP 70
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
A++V + Y+ R ++AG + + ++G + F + G+
Sbjct: 71 PLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQV--YGTLGGMLTRQPFAIGGSG 127
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE--IKERIL 199
+YG +A +KP M P+E + A+ ++ RD SG G +Y+VT T + R++
Sbjct: 128 STFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSG--GVIYLVTITAAGVDHRVI 185
Query: 200 KG 201
G
Sbjct: 186 LG 187
>SGD|S000003538 [details] [associations]
symbol:PRE3 "Beta 1 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0004175 "endopeptidase
activity" evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0019774 "proteasome
core complex, beta-subunit complex" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IC] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
SGD:S000003538 GO:GO:0005634 GO:GO:0043161 EMBL:BK006943
GO:GO:0005789 GO:GO:0004175 EMBL:X87611 GO:GO:0010499 PDB:1VSY
PDB:3L5Q PDBsum:1VSY PDBsum:3L5Q GO:GO:0004298 EMBL:Z49277
GO:GO:0034515 PDB:4G4S PDBsum:4G4S PDB:4B4T PDBsum:4B4T
eggNOG:COG0638 PDB:1FNT PDB:1G0U PDB:1G65 PDB:1JD2 PDB:1RYP
PDB:1Z7Q PDB:2F16 PDB:2FAK PDB:2GPL PDB:2ZCY PDB:3BDM PDB:3D29
PDB:3DY3 PDB:3DY4 PDB:3E47 PDB:3GPJ PDB:3GPT PDB:3GPW PDB:3HYE
PDB:3MG0 PDB:3MG4 PDB:3MG6 PDB:3MG7 PDB:3MG8 PDB:3NZJ PDB:3NZW
PDB:3NZX PDB:3OEU PDB:3OEV PDB:3OKJ PDB:3SDI PDB:3SDK PDB:3SHJ
PDB:3TDD PDB:3UN4 PDB:3UN8 PDB:4FZC PDB:4FZG PDB:4GK7 PDBsum:1FNT
PDBsum:1G0U PDBsum:1G65 PDBsum:1JD2 PDBsum:1RYP PDBsum:1Z7Q
PDBsum:2F16 PDBsum:2FAK PDBsum:2GPL PDBsum:2ZCY PDBsum:3BDM
PDBsum:3D29 PDBsum:3DY3 PDBsum:3DY4 PDBsum:3E47 PDBsum:3GPJ
PDBsum:3GPT PDBsum:3GPW PDBsum:3HYE PDBsum:3MG0 PDBsum:3MG4
PDBsum:3MG6 PDBsum:3MG7 PDBsum:3MG8 PDBsum:3NZJ PDBsum:3NZW
PDBsum:3NZX PDBsum:3OEU PDBsum:3OEV PDBsum:3OKJ PDBsum:3SDI
PDBsum:3SDK PDBsum:3SHJ PDBsum:3TDD PDBsum:3UN4 PDBsum:3UN8
PDBsum:4FZC PDBsum:4FZG PDBsum:4GK7 GO:GO:0019774 MEROPS:T01.010
HOGENOM:HOG000091079 KO:K02738 OMA:NLGTSIM OrthoDB:EOG454D82
EMBL:X78991 EMBL:Z49276 EMBL:X86020 EMBL:S78566 PIR:S61337
RefSeq:NP_012533.1 ProteinModelPortal:P38624 SMR:P38624
DIP:DIP-1527N IntAct:P38624 MINT:MINT-401012 STRING:P38624
UCD-2DPAGE:P38624 PaxDb:P38624 PeptideAtlas:P38624
EnsemblFungi:YJL001W GeneID:853456 KEGG:sce:YJL001W CYGD:YJL001w
GeneTree:ENSGT00510000046484 EvolutionaryTrace:P38624
NextBio:974026 Genevestigator:P38624 GermOnline:YJL001W
Uniprot:P38624
Length = 215
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 45/194 (23%), Positives = 96/194 (49%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD +++++HD+++ SG A D+Q +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTD--KLTRVHDKIWCCRSGSAADTQAIAD 76
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + +LY + ET AS+ L YE + ++AG D++K + T+
Sbjct: 77 IVQYHLELYT-SQYGTPSTETAASVFKELCYENKDN-LTAGIIVAGYDDKNKGEVYTIP- 133
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + +AG+ +YG C+ F+ +M +E + + +L ++ D SG
Sbjct: 134 LGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIR 193
Query: 186 VYIVTPTEIKERIL 199
+ ++T + ER++
Sbjct: 194 MVVLTAAGV-ERLI 206
>UNIPROTKB|B0V0T3 [details] [associations]
symbol:PSMB9 "Proteasome subunit beta type" species:9606
"Homo sapiens" [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 EMBL:BX088556
EMBL:CR936913 EMBL:CR759798 GO:GO:0005839 GO:GO:0004298
HOVERGEN:HBG000123 EMBL:CT009502 EMBL:CR762476 EMBL:CR933844
HGNC:HGNC:9546 IPI:IPI00893456 SMR:B0V0T3 Ensembl:ENST00000422904
Ensembl:ENST00000434083 Ensembl:ENST00000439630 Uniprot:B0V0T3
Length = 196
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 43/182 (23%), Positives = 85/182 (46%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+ SD R+ + F ++S +H+ ++ LSG A D+Q + ++ +L+ + E
Sbjct: 11 MGSDSRVSAGEAVVNRVFDKLSPLHEHIYCALSGSAADAQAVADMAAYQLELHGIELEEP 70
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
A++V + Y+ R ++AG + + ++G + F + G+
Sbjct: 71 PLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQV--YGTLGGMLTRQPFAIGGSG 127
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE--IKERIL 199
+YG +A +KP M P+E + A+ ++ RD SG G +Y+VT T + R++
Sbjct: 128 STFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSG--GVIYLVTITAAGVDHRVI 185
Query: 200 KG 201
G
Sbjct: 186 LG 187
>UNIPROTKB|Q3SZC2 [details] [associations]
symbol:PSMB9 "Proteasome subunit beta type-9" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0019882 "antigen processing and presentation"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 EMBL:AY957499 GO:GO:0051603
GO:GO:0019882 GO:GO:0005839 GO:GO:0004298 HOGENOM:HOG000091079
GeneTree:ENSGT00510000046484 HOVERGEN:HBG000123 EMBL:BC102963
IPI:IPI00695176 RefSeq:NP_001029560.1 UniGene:Bt.48919
ProteinModelPortal:Q3SZC2 SMR:Q3SZC2 STRING:Q3SZC2 MEROPS:T01.013
PRIDE:Q3SZC2 Ensembl:ENSBTAT00000011789 GeneID:510593
KEGG:bta:510593 CTD:5698 eggNOG:NOG291022 InParanoid:Q3SZC2
KO:K02741 OMA:CRRFTTN OrthoDB:EOG47M200 NextBio:20869526
ArrayExpress:Q3SZC2 Uniprot:Q3SZC2
Length = 219
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 43/198 (21%), Positives = 90/198 (45%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H ++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGMELEEPPLVLAAANVVRNITYKYR-EDLSAHLMVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+ + + F + G+ +YG +A +KP M P+E + A+ ++ RD SG G
Sbjct: 135 MSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSG--GV 192
Query: 186 VYIVTPTE--IKERILKG 201
+Y+ T T + R++ G
Sbjct: 193 IYLATITGAGVDHRVILG 210
>DICTYBASE|DDB_G0272969 [details] [associations]
symbol:psmB1 "proteasome subunit beta type 1"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IPI]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 dictyBase:DDB_G0272969
GO:GO:0005634 GO:GO:0005737 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000008 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 KO:K02732 OMA:YDPIGHC RefSeq:XP_001134620.1
HSSP:P23724 ProteinModelPortal:Q86A21 STRING:Q86A21 PRIDE:Q86A21
EnsemblProtists:DDB0232957 GeneID:8618570 KEGG:ddi:DDB_G0272969
ProtClustDB:CLSZ2733551 Uniprot:Q86A21
Length = 236
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 47/196 (23%), Positives = 94/196 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRL---GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
NG ++A+ GK+ IA D R+ G +QT + +I ++ + + SG+ D+ L
Sbjct: 29 NGGTVLAVAGKDYCVIAGDTRMSDGGYGIQT--RKYTKIFQLTKKCVLATSGMQADTIAL 86
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+RL + ++ + M A +S LY KRF PY+ ++AG+ ++ + +I T
Sbjct: 87 QKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTY 146
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACE---AMFKP-------DMEPDELFETVSQALLSS 173
D++G+ E K + G+ + + + A F D+ +++ V ++ S+
Sbjct: 147 DAVGSHERVK-YSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKDSITSA 205
Query: 174 VDRDCLSGWGGHVYIV 189
+RD +G + +V
Sbjct: 206 GERDIYTGDFADIVVV 221
>POMBASE|SPBC4C3.10c [details] [associations]
symbol:pre3 "20S proteasome complex subunit beta 1 Pre3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 PomBase:SPBC4C3.10c GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 GO:GO:0043161 EMBL:CU329671
GO:GO:0004298 eggNOG:COG0638 GO:GO:0019774 PIR:T40487
RefSeq:NP_596295.1 ProteinModelPortal:O43063 SMR:O43063
STRING:O43063 MEROPS:T01.010 EnsemblFungi:SPBC4C3.10c.1
GeneID:2540878 KEGG:spo:SPBC4C3.10c HOGENOM:HOG000091079 KO:K02738
OMA:NLGTSIM OrthoDB:EOG454D82 NextBio:20801994 Uniprot:O43063
Length = 226
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 41/176 (23%), Positives = 88/176 (50%)
Query: 8 GSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ + A+ K+ +A+D R +G + TD +++++ D ++ SG A D+QT+
Sbjct: 24 GTTITALRYKDGVILAADSRTTMGAYIANRVTD--KLTQLTDNIWCCRSGSAADTQTVAD 81
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + +Y+++ D T A+L S + Y+ + ++AG ++ + ++
Sbjct: 82 LLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNK-NMLSAGLIVAGYDEKTGGDVYSIP- 139
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+G + + G+ +YG C+A F+ +M +E E + A+ +++RD SG
Sbjct: 140 LGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSG 195
>UNIPROTKB|F5H9Q1 [details] [associations]
symbol:CNBF3630 "Proteasome subunit beta type"
species:283643 "Cryptococcus neoformans var. neoformans B-3501A"
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=ISS] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0010499 GO:GO:0004298
MEROPS:T01.986 KO:K02732 GO:GO:0019774 EMBL:AAEY01000032
RefSeq:XP_774684.1 ProteinModelPortal:F5H9Q1 SMR:F5H9Q1
GeneID:4936915 KEGG:cnb:CNBF3630 Uniprot:F5H9Q1
Length = 272
Score = 153 (58.9 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 36/140 (25%), Positives = 74/140 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQR-ISKIHDRLFIGLSGLATDSQTLYQ 65
NG +++A+ GK+ IA D R + +I T + R + ++ D++ + +G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R + Y+ + M ++ A ++ +LY KRF PY+ ++ G+ ++ + + D
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDP 148
Query: 126 IGAKELAKDFVVAGTAGESL 145
+G+ E ++ A A +SL
Sbjct: 149 VGSYE--REACRAAGAAQSL 166
>UNIPROTKB|Q5KFP2 [details] [associations]
symbol:CNF01080 "Proteasome subunit beta type"
species:214684 "Cryptococcus neoformans var. neoformans JEC21"
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=ISS] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0010499 GO:GO:0004298 KO:K02732
GO:GO:0019774 OrthoDB:EOG4PG98X EMBL:AE017346 RefSeq:XP_571254.1
ProteinModelPortal:Q5KFP2 SMR:Q5KFP2 GeneID:3258342
GenomeReviews:AE017346_GR GenomeReviews:CM000045_GR
KEGG:cne:CNF01080 Uniprot:Q5KFP2
Length = 272
Score = 153 (58.9 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 36/140 (25%), Positives = 74/140 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQR-ISKIHDRLFIGLSGLATDSQTLYQ 65
NG +++A+ GK+ IA D R + +I T + R + ++ D++ + +G A D +
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQS-EGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVK 88
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R + Y+ + M ++ A ++ +LY KRF PY+ ++ G+ ++ + + D
Sbjct: 89 RVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDP 148
Query: 126 IGAKELAKDFVVAGTAGESL 145
+G+ E ++ A A +SL
Sbjct: 149 VGSYE--REACRAAGAAQSL 166
>ASPGD|ASPL0000030334 [details] [associations]
symbol:AN5784 species:162425 "Emericella nidulans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0019774 "proteasome core complex, beta-subunit
complex" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IEA]
InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227 PROSITE:PS51476
EMBL:AACD01000098 EMBL:BN001305 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081
KO:K02732 OMA:YDPIGHC OrthoDB:EOG4PG98X RefSeq:XP_663388.1
ProteinModelPortal:Q5B0Z6 SMR:Q5B0Z6 STRING:Q5B0Z6
EnsemblFungi:CADANIAT00003266 GeneID:2872075 KEGG:ani:AN5784.2
Uniprot:Q5B0Z6
Length = 261
Score = 140 (54.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKI--HDR------LFIGLSGLAT 58
NG +++ + GK+ +A D R + ++ KI D + + + G A
Sbjct: 37 NGGSVLGITGKDFAVLAGDTRSTSGYNINSRYVPKVFKIGGEDETGKGAHILLSVVGFAA 96
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D L +RL K+Y+ + + M A +S +LY+KRF PY+ Q ++AGL +E K
Sbjct: 97 DGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQAILAGLDEEGKG 156
Query: 119 FICTMDSIGAKE 130
+ D +G+ E
Sbjct: 157 ALYGYDPVGSYE 168
Score = 46 (21.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 148 ACEAMFKPD-MEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
A EA KP+ M + + + V A S+V+R G G + ++T I+E
Sbjct: 205 ALEAR-KPEPMSRETVEQLVRDAFTSAVERHIEVGDGLQMLVITADGIEE 253
>CGD|CAL0000411 [details] [associations]
symbol:PRE3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 CGD:CAL0000411 GO:GO:0005634 GO:GO:0005737
EMBL:AACQ01000098 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 MEROPS:T01.010 HOGENOM:HOG000091079 KO:K02738
RefSeq:XP_714697.1 ProteinModelPortal:Q59YT2 SMR:Q59YT2
STRING:Q59YT2 GeneID:3643660 KEGG:cal:CaO19.6991 Uniprot:Q59YT2
Length = 214
Score = 146 (56.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 46/200 (23%), Positives = 96/200 (48%)
Query: 5 EYN-GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
E N G++++A+ K+ + +D R G + TD ++++IHD ++ SG A D+Q
Sbjct: 15 EVNLGTSIMAVTFKDGVILGADSRTTTGSYIANRVTD--KLTQIHDTIYCCRSGSAADTQ 72
Query: 62 TLYQRLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
+ + + ++Y + P T A++ + Y + + AG ++
Sbjct: 73 AVADMVKYYLQIYSSQLPPGETPTTNIAANVFQEICYNNKDN-LTAGIICAGYDRKNGGS 131
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ ++ IG +++ +AG+ +YG C+ +KP ME ++ E V AL ++ D
Sbjct: 132 VYSIP-IGGSIHKQNYAIAGSGSSYIYGWCDENYKPSMEQEQCVEFVKTALSQAIKWDGS 190
Query: 180 SGWGGHVYIVTPTEIKERIL 199
SG + I+T ++ R++
Sbjct: 191 SGGLIRMVILTKNGVERRVV 210
>ZFIN|ZDB-GENE-001208-3 [details] [associations]
symbol:psmb9b "proteasome (prosome, macropain)
subunit, beta type, 9b" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 ZFIN:ZDB-GENE-001208-3
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOVERGEN:HBG000123 HSSP:P38624 MEROPS:T01.013
KO:K02741 EMBL:AF155580 IPI:IPI00486274 RefSeq:NP_571753.1
UniGene:Dr.80224 ProteinModelPortal:Q9PUS2 SMR:Q9PUS2 PRIDE:Q9PUS2
GeneID:64281 KEGG:dre:64281 CTD:64281 NextBio:20901955
Uniprot:Q9PUS2
Length = 227
Score = 146 (56.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/197 (23%), Positives = 94/197 (47%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ ++A+ + SD R+ + ++S +HD+++ LSG A D+QT+ + +
Sbjct: 17 GTTIIAVEFDGGVVVGSDSRVSAGASVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEIV 76
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSI 126
++ ++ + + D + A+LV + Y+ + ++AG E T+ +
Sbjct: 77 NYQLDVHSIEVDEDPLVCSAATLVKNISYKYK-EELSAHLIVAGWDRREGGQVYATLSGL 135
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
++ F V G+ +YG +A ++ M E E V +L ++ RD SG G
Sbjct: 136 LTRQ---PFAVGGSGSFYIYGFVDAEYRAGMTKKECQEFVINSLSLAMGRDGSSG--GVA 190
Query: 187 YIVT-PTE-IKERILKG 201
Y+VT +E ++E+ + G
Sbjct: 191 YLVTIDSESVEEKCILG 207
>ZFIN|ZDB-GENE-990415-140 [details] [associations]
symbol:psmb9a "proteasome (prosome, macropain)
subunit, beta type, 9a" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 ZFIN:ZDB-GENE-990415-140 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HOGENOM:HOG000091079 GeneTree:ENSGT00510000046484
HOVERGEN:HBG000123 HSSP:P38624 MEROPS:T01.013 KO:K02741 OMA:CRRFTTN
EMBL:FP074889 EMBL:BX510994 EMBL:AL672164 EMBL:AF155579
EMBL:BC078384 IPI:IPI00497756 RefSeq:NP_571466.1 UniGene:Dr.76004
SMR:Q9PUS3 STRING:Q9PUS3 Ensembl:ENSDART00000000698 GeneID:30665
KEGG:dre:30665 CTD:30665 InParanoid:Q9PUS3 NextBio:20807020
Uniprot:Q9PUS3
Length = 218
Score = 145 (56.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 45/184 (24%), Positives = 87/184 (47%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ ++A+ I SD R+ + ++S +HD+++ LSG A D+QT+ + +
Sbjct: 19 GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEIV 78
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI-CTMDSI 126
++ ++ + E D + A+LV + Y+ + ++AG + + T+ +
Sbjct: 79 NYQLDVHSIEVEDDPLVCSAATLVKNISYKYK-EELSAHLIVAGWDKKGGGQVYATLSGL 137
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
K+ F + G+ + G +A +K +M E E V AL ++ RD SG G
Sbjct: 138 LTKQ---PFAIGGSGSFYINGFVDAEYKKNMTKRECQEFVVNALTLAMGRDGSSG--GVA 192
Query: 187 YIVT 190
Y+VT
Sbjct: 193 YVVT 196
>WB|WBGene00003952 [details] [associations]
symbol:pbs-6 species:6239 "Caenorhabditis elegans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0018991 GO:GO:0002119 GO:GO:0010171
GO:GO:0040011 GO:GO:0051603 EMBL:FO080288 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081
KO:K02732 EMBL:AF303265 PIR:S44611 RefSeq:NP_498806.1
UniGene:Cel.23369 ProteinModelPortal:P34286 SMR:P34286
DIP:DIP-24619N IntAct:P34286 MINT:MINT-210761 STRING:P34286
PaxDb:P34286 EnsemblMetazoa:C02F5.9.1 EnsemblMetazoa:C02F5.9.2
GeneID:176161 KEGG:cel:CELE_C02F5.9 UCSC:C02F5.9.1 CTD:176161
WormBase:C02F5.9 GeneTree:ENSGT00550000075035 InParanoid:P34286
OMA:YDPIGHC NextBio:891386 Uniprot:P34286
Length = 258
Score = 145 (56.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G + A+ G+N +ASD R+ + + D ++I ++D + + SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 67 LVFR-HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R HK Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D
Sbjct: 111 LQSRLHK-YRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDP 169
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDME 158
IG E G S GA E M P ++
Sbjct: 170 IGCIE---------RLGYSASGAAEPMIIPFLD 193
>UNIPROTKB|P34286 [details] [associations]
symbol:pbs-6 "Proteasome subunit beta type-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0018991 GO:GO:0002119 GO:GO:0010171
GO:GO:0040011 GO:GO:0051603 EMBL:FO080288 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986 HOGENOM:HOG000091081
KO:K02732 EMBL:AF303265 PIR:S44611 RefSeq:NP_498806.1
UniGene:Cel.23369 ProteinModelPortal:P34286 SMR:P34286
DIP:DIP-24619N IntAct:P34286 MINT:MINT-210761 STRING:P34286
PaxDb:P34286 EnsemblMetazoa:C02F5.9.1 EnsemblMetazoa:C02F5.9.2
GeneID:176161 KEGG:cel:CELE_C02F5.9 UCSC:C02F5.9.1 CTD:176161
WormBase:C02F5.9 GeneTree:ENSGT00550000075035 InParanoid:P34286
OMA:YDPIGHC NextBio:891386 Uniprot:P34286
Length = 258
Score = 145 (56.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G + A+ G+N +ASD R+ + + D ++I ++D + + SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 67 LVFR-HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R HK Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D
Sbjct: 111 LQSRLHK-YRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDP 169
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDME 158
IG E G S GA E M P ++
Sbjct: 170 IGCIE---------RLGYSASGAAEPMIIPFLD 193
>UNIPROTKB|E2R0B6 [details] [associations]
symbol:PSMB6 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 KO:K02738 OMA:NLGTSIM
GeneTree:ENSGT00510000046484 CTD:5694 EMBL:AAEX03003593
RefSeq:XP_849241.1 Ensembl:ENSCAFT00000025132 GeneID:607466
KEGG:cfa:607466 NextBio:20893190 Uniprot:E2R0B6
Length = 239
Score = 144 (55.7 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 42/196 (21%), Positives = 90/196 (45%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + + +D R G + TD +++ IHDR+F SG A D+Q +
Sbjct: 34 GTTIMAVQFEGGVVLGADSRTTTGSYIANRVTD--KLTPIHDRIFCCRSGSAADTQAVAD 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ + + T ASL + Y R +IAG ++ + ++
Sbjct: 92 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP- 149
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A ++ M +E + + AL +++RD SG
Sbjct: 150 MGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIR 209
Query: 186 VYIVTPTEIKERILKG 201
+ + + ++ ++L G
Sbjct: 210 LAAIAESGVERQVLLG 225
>SGD|S000000137 [details] [associations]
symbol:PRE7 "Beta 6 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019774 "proteasome core complex,
beta-subunit complex" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IC] [GO:0004175 "endopeptidase
activity" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IC] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=IDA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
SGD:S000000137 GO:GO:0005634 GO:GO:0043161 GO:GO:0005789
EMBL:BK006936 EMBL:X78214 GO:GO:0010499 PDB:1VSY PDB:3L5Q
PDBsum:1VSY PDBsum:3L5Q EMBL:M34777 GO:GO:0004298 GO:GO:0034515
PDB:4G4S PDBsum:4G4S PDB:4B4T PDBsum:4B4T eggNOG:COG0638 PDB:1FNT
PDB:1G0U PDB:1G65 PDB:1JD2 PDB:1RYP PDB:1Z7Q PDB:2F16 PDB:2FAK
PDB:2GPL PDB:2ZCY PDB:3BDM PDB:3D29 PDB:3DY3 PDB:3DY4 PDB:3E47
PDB:3GPJ PDB:3GPT PDB:3GPW PDB:3HYE PDB:3MG0 PDB:3MG4 PDB:3MG6
PDB:3MG7 PDB:3MG8 PDB:3NZJ PDB:3NZW PDB:3NZX PDB:3OEU PDB:3OEV
PDB:3OKJ PDB:3SDI PDB:3SDK PDB:3SHJ PDB:3TDD PDB:3UN4 PDB:3UN8
PDB:4FZC PDB:4FZG PDB:4GK7 PDBsum:1FNT PDBsum:1G0U PDBsum:1G65
PDBsum:1JD2 PDBsum:1RYP PDBsum:1Z7Q PDBsum:2F16 PDBsum:2FAK
PDBsum:2GPL PDBsum:2ZCY PDBsum:3BDM PDBsum:3D29 PDBsum:3DY3
PDBsum:3DY4 PDBsum:3E47 PDBsum:3GPJ PDBsum:3GPT PDBsum:3GPW
PDBsum:3HYE PDBsum:3MG0 PDBsum:3MG4 PDBsum:3MG6 PDBsum:3MG7
PDBsum:3MG8 PDBsum:3NZJ PDBsum:3NZW PDBsum:3NZX PDBsum:3OEU
PDBsum:3OEV PDBsum:3OKJ PDBsum:3SDI PDBsum:3SDK PDBsum:3SHJ
PDBsum:3TDD PDBsum:3UN4 PDBsum:3UN8 PDBsum:4FZC PDBsum:4FZG
PDBsum:4GK7 MEROPS:T01.986 HOGENOM:HOG000091081 KO:K02732
GeneTree:ENSGT00550000075035 OMA:YDPIGHC GO:GO:0019774
OrthoDB:EOG4PG98X EMBL:D00845 EMBL:Z35802 EMBL:AY558462 PIR:S42436
RefSeq:NP_009512.1 ProteinModelPortal:P23724 SMR:P23724
DIP:DIP-2821N IntAct:P23724 MINT:MINT-592611 STRING:P23724
UCD-2DPAGE:P23724 PaxDb:P23724 PeptideAtlas:P23724
EnsemblFungi:YBL041W GeneID:852239 KEGG:sce:YBL041W CYGD:YBL041w
BindingDB:P23724 ChEMBL:CHEMBL4904 EvolutionaryTrace:P23724
NextBio:970787 Genevestigator:P23724 GermOnline:YBL041W
Uniprot:P23724
Length = 241
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 51/218 (23%), Positives = 97/218 (44%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + ++ ++ D + + +G A D L +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + + A + LLY KRF PY+ +IAGL ++ K + + D
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFD 145
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETV 166
+G+ E ++ AG A SL + + FK EP +E+ + V
Sbjct: 146 PVGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLV 203
Query: 167 SQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ S+ +R G G + IVT +++ + + D
Sbjct: 204 RDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>UNIPROTKB|P34065 [details] [associations]
symbol:PSMB5 "Proteasome subunit beta type-5" species:9031
"Gallus gallus" [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOVERGEN:HBG108297 MEROPS:T01.P01 EMBL:AB001935
EMBL:X57210 IPI:IPI00588430 PIR:S30539 UniGene:Gga.4313
UniGene:Gga.46493 UniGene:Gga.55806 ProteinModelPortal:P34065
SMR:P34065 PRIDE:P34065 Uniprot:P34065
Length = 256
Score = 143 (55.4 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 46/186 (24%), Positives = 86/186 (46%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A + +A D R + Q++ +I+ L ++G A D + ++R
Sbjct: 54 HGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADC-SFWER 112
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 113 LLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 171
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + + F V G+ YG + +PDM DE E +A+ + RD SG
Sbjct: 172 EGTRIPGEAFAV-GSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVT 230
Query: 186 VYIVTP 191
VY V P
Sbjct: 231 VYHVGP 236
>UNIPROTKB|P28072 [details] [associations]
symbol:PSMB6 "Proteasome subunit beta type-6" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=ISS;NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=NAS]
[GO:0004175 "endopeptidase activity" evidence=NAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0044281 GO:GO:0000082
GO:GO:0004175 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
MEROPS:T01.010 HOGENOM:HOG000091079 KO:K02738 OMA:NLGTSIM CTD:5694
HOVERGEN:HBG000123 OrthoDB:EOG40CHHX EMBL:D29012 EMBL:BC000835
EMBL:X61971 IPI:IPI00000811 PIR:B54589 PIR:S17522
RefSeq:NP_002789.1 UniGene:Hs.77060 ProteinModelPortal:P28072
SMR:P28072 IntAct:P28072 MINT:MINT-5004163 STRING:P28072
PhosphoSite:P28072 DMDM:20532407 OGP:P28072 SWISS-2DPAGE:P28072
PaxDb:P28072 PeptideAtlas:P28072 PRIDE:P28072 DNASU:5694
Ensembl:ENST00000270586 GeneID:5694 KEGG:hsa:5694 UCSC:uc002fzb.3
GeneCards:GC17P004699 HGNC:HGNC:9543 HPA:HPA023312 MIM:600307
neXtProt:NX_P28072 PharmGKB:PA33888 InParanoid:P28072
PhylomeDB:P28072 ChEMBL:CHEMBL1944496 ChiTaRS:PSMB6 GenomeRNAi:5694
NextBio:22118 ArrayExpress:P28072 Bgee:P28072 CleanEx:HS_PSMB6
Genevestigator:P28072 GermOnline:ENSG00000142507 Uniprot:P28072
Length = 239
Score = 142 (55.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 42/196 (21%), Positives = 89/196 (45%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + +D R G + TD +++ IHDR+F SG A D+Q +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTD--KLTPIHDRIFCCRSGSAADTQAVAD 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ + + T ASL + Y R +IAG ++ + ++
Sbjct: 92 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP- 149
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A ++ M +E + + AL +++RD SG
Sbjct: 150 MGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIR 209
Query: 186 VYIVTPTEIKERILKG 201
+ + + ++ ++L G
Sbjct: 210 LAAIAESGVERQVLLG 225
>MGI|MGI:104880 [details] [associations]
symbol:Psmb6 "proteasome (prosome, macropain) subunit, beta
type 6" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
MGI:MGI:104880 GO:GO:0005829 GO:GO:0005634 Reactome:REACT_102124
GO:GO:0051603 EMBL:AL592547 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 PDB:3UNB PDB:3UNE PDBsum:3UNB PDBsum:3UNE
MEROPS:T01.010 HOGENOM:HOG000091079 KO:K02738 OMA:NLGTSIM
GeneTree:ENSGT00510000046484 CTD:5694 HOVERGEN:HBG000123
OrthoDB:EOG40CHHX EMBL:U13393 EMBL:U13394 EMBL:AK078437
EMBL:AK132042 EMBL:AK167123 EMBL:AK167227 EMBL:BC013897
IPI:IPI00119239 RefSeq:NP_032972.3 UniGene:Mm.98
ProteinModelPortal:Q60692 SMR:Q60692 IntAct:Q60692 STRING:Q60692
PhosphoSite:Q60692 REPRODUCTION-2DPAGE:Q60692 PaxDb:Q60692
PRIDE:Q60692 Ensembl:ENSMUST00000018430 GeneID:19175 KEGG:mmu:19175
InParanoid:Q60692 ChEMBL:CHEMBL1944493 NextBio:295856 Bgee:Q60692
Genevestigator:Q60692 GermOnline:ENSMUSG00000018286 Uniprot:Q60692
Length = 238
Score = 141 (54.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/196 (21%), Positives = 88/196 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + +D R G + TD +++ IHD +F SG A D+Q +
Sbjct: 33 GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTD--KLTPIHDHIFCCRSGSAADTQAVAD 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ + + T ASL + Y R +IAG ++ + ++
Sbjct: 91 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP- 148
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A ++ M DE + + AL +++RD SG
Sbjct: 149 MGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIR 208
Query: 186 VYIVTPTEIKERILKG 201
+ + + ++ ++L G
Sbjct: 209 LAAIQESGVERQVLLG 224
>RGD|61881 [details] [associations]
symbol:Psmb6 "proteasome (prosome, macropain) subunit, beta type
6" species:10116 "Rattus norvegicus" [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=ISO;ISS] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 RGD:61881 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.010
HOGENOM:HOG000091079 KO:K02738 GeneTree:ENSGT00510000046484 CTD:5694
HOVERGEN:HBG000123 OrthoDB:EOG40CHHX EMBL:BC058451 EMBL:AABR03076595
EMBL:D10754 EMBL:BN000325 IPI:IPI00471722 PIR:JX0228 PIR:S09086
RefSeq:NP_476440.2 RefSeq:XP_002729074.1 RefSeq:XP_003753602.1
UniGene:Rn.8118 ProteinModelPortal:P28073 SMR:P28073 IntAct:P28073
STRING:P28073 World-2DPAGE:0004:P28073 PRIDE:P28073
Ensembl:ENSRNOT00000015746 Ensembl:ENSRNOT00000026507
GeneID:100360846 GeneID:29666 KEGG:rno:100360846 KEGG:rno:29666
UCSC:RGD:61881 InParanoid:P28073 OMA:VYICRSG NextBio:609975
Genevestigator:P28073 GermOnline:ENSRNOG00000019551 Uniprot:P28073
Length = 238
Score = 140 (54.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 42/196 (21%), Positives = 88/196 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + +D R G + TD +++ IHD +F SG A D+Q +
Sbjct: 33 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTD--KLTPIHDHIFCCRSGSAADTQAVAD 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ + + T ASL + Y R +IAG ++ + ++
Sbjct: 91 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP- 148
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A ++ M DE + + AL +++RD SG
Sbjct: 149 MGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIR 208
Query: 186 VYIVTPTEIKERILKG 201
+ + + ++ ++L G
Sbjct: 209 LAAIQQSGVERQVLLG 224
>UNIPROTKB|Q3MHN0 [details] [associations]
symbol:PSMB6 "Proteasome subunit beta type-6" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 PDB:1IRU PDBsum:1IRU MEROPS:T01.010
HOGENOM:HOG000091079 KO:K02738 OMA:NLGTSIM
GeneTree:ENSGT00510000046484 EMBL:BC105176 IPI:IPI00697260
RefSeq:NP_001029541.1 UniGene:Bt.2116 ProteinModelPortal:Q3MHN0
SMR:Q3MHN0 STRING:Q3MHN0 PRIDE:Q3MHN0 Ensembl:ENSBTAT00000017816
GeneID:510069 KEGG:bta:510069 CTD:5694 HOVERGEN:HBG000123
InParanoid:Q3MHN0 OrthoDB:EOG40CHHX EvolutionaryTrace:Q3MHN0
NextBio:20869260 Uniprot:Q3MHN0
Length = 239
Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/196 (21%), Positives = 88/196 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + +D R G + TD +++ IHDR+F SG A D+Q +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTD--KLTPIHDRIFCCRSGSAADTQAVAD 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ + + T ASL + Y R +IAG ++ + ++
Sbjct: 92 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP- 149
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A ++ M +E + + AL +++RD SG
Sbjct: 150 MGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIR 209
Query: 186 VYIVTPTEIKERILKG 201
+ + ++ ++L G
Sbjct: 210 LAAIAEPGVERQVLLG 225
>UNIPROTKB|F1RFV5 [details] [associations]
symbol:PSMB6 "Proteasome subunit beta type" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02738 OMA:NLGTSIM GeneTree:ENSGT00510000046484
CTD:5694 EMBL:CU929524 RefSeq:NP_001138398.2 UniGene:Ssc.1420
Ensembl:ENSSSCT00000019495 GeneID:497065 KEGG:ssc:497065
ArrayExpress:F1RFV5 Uniprot:F1RFV5
Length = 241
Score = 139 (54.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 41/196 (20%), Positives = 89/196 (45%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + +D R G + TD +++ IHDR+F SG A D+Q +
Sbjct: 36 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTD--KLTPIHDRIFCCRSGSAADTQAVAD 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ + + T ASL + Y R ++AG ++ + ++
Sbjct: 94 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIVAGWDPQEGGQVYSVP- 151
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A ++ M +E + + AL +++RD SG
Sbjct: 152 MGGMMVRQAFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIR 211
Query: 186 VYIVTPTEIKERILKG 201
+ + + ++ ++L G
Sbjct: 212 LAAIAESGVERQVLLG 227
>ASPGD|ASPL0000010099 [details] [associations]
symbol:AN3493 species:162425 "Emericella nidulans"
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0019748 "secondary metabolic process"
evidence=IEP;IGC] InterPro:IPR001353 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS51476 EMBL:BN001302 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.986
HOGENOM:HOG000091081 KO:K02732 OrthoDB:EOG4PG98X EMBL:AACD01000059
RefSeq:XP_661097.1 ProteinModelPortal:Q5B7I7 STRING:Q5B7I7
EnsemblFungi:CADANIAT00005264 GeneID:2872915 KEGG:ani:AN3493.2
OMA:NINTRYE Uniprot:Q5B7I7
Length = 215
Score = 137 (53.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 52/205 (25%), Positives = 89/205 (43%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQT-IATDFQRISKIHDR-LFIGLSGLATDSQT 62
NG A + + G + +A D R G + T I DR + I + G A D +
Sbjct: 13 NGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDARDRSIVISVIGFAADGRA 72
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L +RL +Y+ + +++ A VS +LYEKRF PY Q ++AG+ + + I
Sbjct: 73 LKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDADGQGAIYY 132
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELF---ETVSQALLSSVDRDCL 179
D G E + AG A + ++ P ++P L + V A + +R
Sbjct: 133 YDPAGCIE-KRSHCAAGEASSLMLPFLDSQ-APRLQPLSLQTAQQLVRDAYTGATERHIE 190
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
G + +VT + E+++ + D
Sbjct: 191 VGDHLQMLVVTREGVSEQLVDLKKD 215
>TAIR|locus:2079241 [details] [associations]
symbol:AT3G26340 species:3702 "Arabidopsis thaliana"
[GO:0004175 "endopeptidase activity" evidence=IEA;ISS] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005839 "proteasome core complex"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051603 "proteolysis involved
in cellular protein catabolic process" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IDA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000502 EMBL:AP001298 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000091082 EMBL:AY125569
EMBL:AF439846 EMBL:AY085678 IPI:IPI00532441 RefSeq:NP_189265.1
UniGene:At.6729 ProteinModelPortal:Q9LIP2 SMR:Q9LIP2 IntAct:Q9LIP2
STRING:Q9LIP2 MEROPS:T01.A10 PaxDb:Q9LIP2 PRIDE:Q9LIP2
EnsemblPlants:AT3G26340.1 GeneID:822238 KEGG:ath:AT3G26340
TAIR:At3g26340 InParanoid:Q9LIP2 KO:K02737 OMA:QTFAYGV
PhylomeDB:Q9LIP2 ProtClustDB:CLSN2682489 Genevestigator:Q9LIP2
Uniprot:Q9LIP2
Length = 273
Score = 140 (54.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 46/184 (25%), Positives = 86/184 (46%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +A + K +A+D R + + ++I +I+ + ++G A D Q ++ L
Sbjct: 57 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 116
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +L++L +R + + L++ +LY R +IAG DE P + +D+ G
Sbjct: 117 GIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGW-DETGPGLYYVDNEG 175
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L D G+ YG ++ +K DM +E E +++ + RD SG VY
Sbjct: 176 GR-LKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVY 234
Query: 188 IVTP 191
V P
Sbjct: 235 HVGP 238
>UNIPROTKB|Q5W416 [details] [associations]
symbol:PSMB8 "Proteasome subunit beta type-8" species:9615
"Canis lupus familiaris" [GO:0005839 "proteasome core complex"
evidence=ISS] [GO:0045444 "fat cell differentiation" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0019882 "antigen processing and presentation"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0045444 GO:GO:0051603
GO:GO:0019882 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
HOGENOM:HOG000091082 HOVERGEN:HBG108297
GeneTree:ENSGT00510000046395 MEROPS:T01.015 CTD:5696 KO:K02740
OMA:MQPTEFL OrthoDB:EOG4WM4V9 EMBL:AJ630364 RefSeq:NP_001041550.1
UniGene:Cfa.12298 ProteinModelPortal:Q5W416 SMR:Q5W416
STRING:Q5W416 Ensembl:ENSCAFT00000001293 GeneID:474865
KEGG:cfa:474865 InParanoid:Q5W416 NextBio:20850809 Uniprot:Q5W416
Length = 276
Score = 131 (51.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 41/176 (23%), Positives = 83/176 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A D R ++ ++ +I+ L +SG A D Q ++R
Sbjct: 71 HGTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQ-YWER 129
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ + +LY LR + + L+S ++Y+ R +I G D+ P + +D
Sbjct: 130 LLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGW-DKKGPGLYYVDQ 188
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G + L+ + G+ YG ++ ++P + P+E +E +A+ + RD SG
Sbjct: 189 NGTR-LSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSG 243
>ASPGD|ASPL0000017034 [details] [associations]
symbol:AN3756 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0019774 "proteasome core
complex, beta-subunit complex" evidence=IEA] [GO:0034515
"proteasome storage granule" evidence=IEA] [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 MEROPS:T01.010 HOGENOM:HOG000091079
KO:K02738 OMA:NLGTSIM OrthoDB:EOG454D82 RefSeq:XP_661360.1
ProteinModelPortal:Q5B6S4 SMR:Q5B6S4 STRING:Q5B6S4
EnsemblFungi:CADANIAT00004965 GeneID:2873170 KEGG:ani:AN3756.2
Uniprot:Q5B6S4
Length = 233
Score = 129 (50.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 45/192 (23%), Positives = 89/192 (46%)
Query: 5 EYN-GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
E N G++++A+ K+ + +D R G + TD +++++HD ++ SG A D+Q
Sbjct: 27 EVNLGTSIMAINFKDGVILGADSRTTTGAYIANRVTD--KLTQVHDTIWCCRSGSAADTQ 84
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
+ + + +Y + + A+L L YE + +IAG +
Sbjct: 85 AVADIVSYHLNMYSIVNNEPPSTQVAAALFQELCYENK-DMLSAGIIIAGYDPRHGGQVY 143
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
++ +G + + + G+ +YG C+A +K +M +E E V AL ++ D SG
Sbjct: 144 SIP-LGGSLHKQAYSIGGSGSTYIYGYCDANWKENMTEEEGVEFVRGALREAIKWDGSSG 202
Query: 182 WGGHVYIVTPTE 193
G + +V T+
Sbjct: 203 --GVIRMVVLTK 212
>WB|WBGene00003951 [details] [associations]
symbol:pbs-5 species:6239 "Caenorhabditis elegans"
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA]
[GO:0009401 "phosphoenolpyruvate-dependent sugar phosphotransferase
system" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS51476 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0000003 GO:GO:0051603 EMBL:Z81564
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000091082
HSSP:P30656 GeneTree:ENSGT00510000046395 KO:K02737 OMA:NDEGEMA
PIR:T23336 RefSeq:NP_493558.1 ProteinModelPortal:Q9XUV0 SMR:Q9XUV0
DIP:DIP-25961N IntAct:Q9XUV0 MINT:MINT-211978 STRING:Q9XUV0
MEROPS:T01.A09 PaxDb:Q9XUV0 EnsemblMetazoa:K05C4.1.1
EnsemblMetazoa:K05C4.1.2 GeneID:173334 KEGG:cel:CELE_K05C4.1
UCSC:K05C4.1.1 CTD:173334 WormBase:K05C4.1 InParanoid:Q9XUV0
NextBio:879217 Uniprot:Q9XUV0
Length = 284
Score = 130 (50.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH-KLYQ 75
K +A D R + +I I DR+ ++G A D Q + R+V ++ LY+
Sbjct: 80 KGGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQ-FWTRIVAKYCTLYE 138
Query: 76 LREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDF 135
LRE+ + + + LY R ++AG D+ P I +DS G + K
Sbjct: 139 LREKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGY-DKKGPQIFKVDSEGDRCQLKVC 197
Query: 136 VVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 193
V G+ + YG + +KP M DE + +A++ + RD SG ++ +TPTE
Sbjct: 198 SV-GSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSGSGGVCNLCHITPTE 254
>SGD|S000006307 [details] [associations]
symbol:PRE2 "Beta 5 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0019774 "proteasome
core complex, beta-subunit complex" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0034515 "proteasome storage granule"
evidence=IC] [GO:0010499 "proteasomal ubiquitin-independent protein
catabolic process" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IC]
[GO:0004175 "endopeptidase activity" evidence=IEA;IMP] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0080129
"proteasome core complex assembly" evidence=IMP] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
SGD:S000006307 GO:GO:0005634 GO:GO:0043161 GO:GO:0005789
GO:GO:0004175 EMBL:BK006949 GO:GO:0010499 PDB:1VSY PDB:3L5Q
PDBsum:1VSY PDBsum:3L5Q EMBL:U32445 EMBL:Z28348 GO:GO:0004298
GO:GO:0034515 PDB:4G4S PDBsum:4G4S PDB:4B4T PDBsum:4B4T
eggNOG:COG0638 PDB:1FNT PDB:1G0U PDB:1G65 PDB:1JD2 PDB:1RYP
PDB:1Z7Q PDB:2F16 PDB:2FAK PDB:2GPL PDB:2ZCY PDB:3BDM PDB:3D29
PDB:3DY3 PDB:3DY4 PDB:3E47 PDB:3GPJ PDB:3GPT PDB:3GPW PDB:3HYE
PDB:3MG0 PDB:3MG4 PDB:3MG6 PDB:3MG7 PDB:3MG8 PDB:3NZJ PDB:3NZW
PDB:3NZX PDB:3OEU PDB:3OEV PDB:3OKJ PDB:3SDI PDB:3SDK PDB:3SHJ
PDB:3TDD PDB:3UN4 PDB:3UN8 PDB:4FZC PDB:4FZG PDB:4GK7 PDBsum:1FNT
PDBsum:1G0U PDBsum:1G65 PDBsum:1JD2 PDBsum:1RYP PDBsum:1Z7Q
PDBsum:2F16 PDBsum:2FAK PDBsum:2GPL PDBsum:2ZCY PDBsum:3BDM
PDBsum:3D29 PDBsum:3DY3 PDBsum:3DY4 PDBsum:3E47 PDBsum:3GPJ
PDBsum:3GPT PDBsum:3GPW PDBsum:3HYE PDBsum:3MG0 PDBsum:3MG4
PDBsum:3MG6 PDBsum:3MG7 PDBsum:3MG8 PDBsum:3NZJ PDBsum:3NZW
PDBsum:3NZX PDBsum:3OEU PDBsum:3OEV PDBsum:3OKJ PDBsum:3SDI
PDBsum:3SDK PDBsum:3SHJ PDBsum:3TDD PDBsum:3UN4 PDBsum:3UN8
PDBsum:4FZC PDBsum:4FZG PDBsum:4GK7 GO:GO:0080129
HOGENOM:HOG000091082 GeneTree:ENSGT00510000046395 GO:GO:0019774
KO:K02737 OMA:QTFAYGV MEROPS:T01.012 OrthoDB:EOG47WRXH EMBL:M96667
EMBL:X68662 PIR:A45411 RefSeq:NP_015428.1 ProteinModelPortal:P30656
SMR:P30656 DIP:DIP-2806N IntAct:P30656 MINT:MINT-489734
STRING:P30656 PaxDb:P30656 PeptideAtlas:P30656 EnsemblFungi:YPR103W
GeneID:856218 KEGG:sce:YPR103W CYGD:YPR103w BindingDB:P30656
ChEMBL:CHEMBL4659 EvolutionaryTrace:P30656 NextBio:981441
Genevestigator:P30656 GermOnline:YPR103W Uniprot:P30656
Length = 287
Score = 129 (50.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/184 (22%), Positives = 86/184 (46%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A + +A D R + +++ +I+ L ++G A D Q
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETW 133
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L++LRE+ + + ++S L+Y+ + +I G + ++ P I +DS
Sbjct: 134 LGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSD 193
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + L D G+ YG ++ +K D+ ++ +++L++ RD SG ++
Sbjct: 194 GTR-LKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 252
Query: 187 YIVT 190
Y VT
Sbjct: 253 YHVT 256
>RGD|3426 [details] [associations]
symbol:Psmb8 "proteasome (prosome, macropain) subunit, beta type 8
(large multifunctional peptidase 7)" species:10116 "Rattus
norvegicus" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=ISO;ISS;TAS] [GO:0019882 "antigen processing and
presentation" evidence=ISO;NAS] [GO:0045444 "fat cell
differentiation" evidence=ISO;ISS] [GO:0051603 "proteolysis involved
in cellular protein catabolic process" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 RGD:3426 GO:GO:0005634 GO:GO:0005737 GO:GO:0045444
EMBL:BX883043 GO:GO:0051603 GO:GO:0019882 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 HOGENOM:HOG000091082 HOVERGEN:HBG108297
GeneTree:ENSGT00510000046395 MEROPS:T01.015 CTD:5696 KO:K02740
OMA:MQPTEFL OrthoDB:EOG4WM4V9 EMBL:D10729 IPI:IPI00196791 PIR:S21126
RefSeq:NP_542945.2 UniGene:Rn.203098 ProteinModelPortal:P28064
SMR:P28064 STRING:P28064 PRIDE:P28064 Ensembl:ENSRNOT00000000528
GeneID:24968 KEGG:rno:24968 UCSC:RGD:3426 InParanoid:P28064
NextBio:605008 Genevestigator:P28064 GermOnline:ENSRNOG00000000456
Uniprot:P28064
Length = 276
Score = 126 (49.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 43/184 (23%), Positives = 88/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+G+ +A ++ +A D R G + TI + ++ +I+ L +SG A D Q +
Sbjct: 71 HGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVN--KVIEINPYLLGTMSGCAADCQ-YW 127
Query: 65 QRLVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+RL+ + +LY LR + + L+S ++ + R +I G D+ P + +
Sbjct: 128 ERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGW-DKKGPGLYYV 186
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D G + L+ G+ YG ++ ++ D+ P+E ++ +A++ + RD SG
Sbjct: 187 DDNGTR-LSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGV 245
Query: 184 GHVY 187
++Y
Sbjct: 246 VNMY 249
>ZFIN|ZDB-GENE-990415-216 [details] [associations]
symbol:psmb6 "proteasome (prosome, macropain)
subunit, beta type, 6" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 ZFIN:ZDB-GENE-990415-216 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
MEROPS:T01.010 HOGENOM:HOG000091079 HOVERGEN:HBG000123
EMBL:BC092699 IPI:IPI00508298 UniGene:Dr.11843
ProteinModelPortal:Q568V4 SMR:Q568V4 STRING:Q568V4
InParanoid:Q568V4 ArrayExpress:Q568V4 Uniprot:Q568V4
Length = 232
Score = 123 (48.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/196 (20%), Positives = 87/196 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + +D R G + TD +++ IHDR+F SG A D+Q +
Sbjct: 32 GTTIMAVEFDGGVVMGADSRATTGAYIANRVTD--KLTPIHDRIFCCRSGSAADTQAIAD 89
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ + + + +T ASL + Y R ++AG + T+
Sbjct: 90 AVTYQLGFHSIELDEAPLVQTAASLFRDMCYRYR-EELMAGIIVAGWDRRRGGQVYTVP- 147
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + V G+ +YG ++ ++ M +E + + AL +++RD SG
Sbjct: 148 VGGMLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDGSSGGVVR 207
Query: 186 VYIVTPTEIKERILKG 201
+ +++ ++ + + G
Sbjct: 208 LAVISEQGVERQAILG 223
>UNIPROTKB|P28062 [details] [associations]
symbol:PSMB8 "Proteasome subunit beta type-8" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0045444 "fat cell differentiation" evidence=IMP] [GO:0005839
"proteasome core complex" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=TAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0060337 "type I interferon-mediated signaling
pathway" evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0060337 GO:GO:0016032
Reactome:REACT_21300 EMBL:CH471081 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0051436 GO:GO:0045444
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 EMBL:X87344
EMBL:BX088556 EMBL:BX927138 EMBL:X66401 EMBL:AL671681 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000091082
HOVERGEN:HBG108297 MEROPS:T01.015 CTD:5696 KO:K02740 OMA:MQPTEFL
OrthoDB:EOG4WM4V9 EMBL:X62598 EMBL:Z14982 EMBL:L11045 EMBL:U17496
EMBL:U17497 EMBL:AL669918 EMBL:AL935043 EMBL:BX682530 EMBL:CT009502
EMBL:CR762476 EMBL:CR753889 EMBL:BC001114 EMBL:U32863 EMBL:U32862
IPI:IPI00000783 IPI:IPI00215824 PIR:A44324 PIR:C44324 PIR:G01564
PIR:G02018 RefSeq:NP_004150.1 RefSeq:NP_683720.2 UniGene:Hs.180062
ProteinModelPortal:P28062 SMR:P28062 IntAct:P28062 STRING:P28062
PhosphoSite:P28062 DMDM:1172602 PaxDb:P28062 PRIDE:P28062
DNASU:5696 Ensembl:ENST00000374881 Ensembl:ENST00000374882
Ensembl:ENST00000383236 Ensembl:ENST00000383238
Ensembl:ENST00000416134 Ensembl:ENST00000416564
Ensembl:ENST00000421445 Ensembl:ENST00000429645
Ensembl:ENST00000435978 Ensembl:ENST00000436627
Ensembl:ENST00000438442 Ensembl:ENST00000441960
Ensembl:ENST00000446762 Ensembl:ENST00000452573
Ensembl:ENST00000455660 Ensembl:ENST00000457261
Ensembl:ENST00000546794 GeneID:5696 KEGG:hsa:5696 UCSC:uc003oce.3
UCSC:uc003ocf.3 GeneCards:GC06M032808 HGNC:HGNC:9545 MIM:177046
MIM:256040 neXtProt:NX_P28062 Orphanet:2615 PharmGKB:PA33890
InParanoid:P28062 PhylomeDB:P28062 BindingDB:P28062
ChEMBL:CHEMBL5620 ChiTaRS:PSMB8 GenomeRNAi:5696 NextBio:22126
ArrayExpress:P28062 Bgee:P28062 CleanEx:HS_PSMB8
Genevestigator:P28062 GermOnline:ENSG00000204264 Uniprot:P28062
Length = 276
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/182 (22%), Positives = 84/182 (46%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ A D R A ++ +I+ L +SG A D Q ++R
Sbjct: 71 HGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQ-YWER 129
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ + +LY LR + + L+S ++ + R +I G D+ P + +D
Sbjct: 130 LLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGW-DKKGPGLYYVDE 188
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + L+ + G+ YG ++ ++P++ P+E ++ +A+ + RD SG +
Sbjct: 189 HGTR-LSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVN 247
Query: 186 VY 187
+Y
Sbjct: 248 MY 249
>CGD|CAL0006242 [details] [associations]
symbol:PRE2 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0019774 "proteasome core complex, beta-subunit
complex" evidence=IEA] [GO:0080129 "proteasome core complex
assembly" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 CGD:CAL0006242 GO:GO:0005634
GO:GO:0005737 EMBL:AACQ01000095 EMBL:AACQ01000096 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000091082
KO:K02737 MEROPS:T01.012 RefSeq:XP_714764.1 RefSeq:XP_714824.1
ProteinModelPortal:Q59Z65 SMR:Q59Z65 STRING:Q59Z65 GeneID:3643490
GeneID:3643558 KEGG:cal:CaO19.2233 KEGG:cal:CaO19.9775
Uniprot:Q59Z65
Length = 285
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/184 (21%), Positives = 85/184 (46%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A + +A D R + ++ +I+ L ++G A D Q
Sbjct: 72 HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINPFLLGTMAGGAADCQFWETW 131
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L++LRE+ + + ++S L+Y+ + ++ G + ++ P I +DS
Sbjct: 132 LGTQCRLHELREKERISVAAASKILSNLVYQYKGMGLSMGTMVCGHTAKEGPTIYYVDSD 191
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + L D G+ YG ++ +K D+ ++ +++L++ RD SG ++
Sbjct: 192 GTR-LKGDVFCVGSGQTFAYGVLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSVNL 250
Query: 187 YIVT 190
Y VT
Sbjct: 251 YHVT 254
>UNIPROTKB|Q32KL2 [details] [associations]
symbol:PSMB5 "Proteasome subunit beta type-5" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737
GO:GO:0006979 GO:GO:0043161 GO:GO:0005839 GO:GO:0004298
eggNOG:COG0638 PDB:1IRU PDBsum:1IRU HOGENOM:HOG000091082
HOVERGEN:HBG108297 GeneTree:ENSGT00510000046395 KO:K02737
OMA:QTFAYGV EMBL:BC110039 IPI:IPI00685901 RefSeq:NP_001032701.1
UniGene:Bt.5322 ProteinModelPortal:Q32KL2 SMR:Q32KL2 STRING:Q32KL2
MEROPS:T01.P01 PRIDE:Q32KL2 Ensembl:ENSBTAT00000016918
GeneID:534640 KEGG:bta:534640 CTD:5693 InParanoid:Q32KL2
OrthoDB:EOG4M91S6 EvolutionaryTrace:Q32KL2 NextBio:20876485
Uniprot:Q32KL2
Length = 263
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/184 (21%), Positives = 87/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ YG + + D+E +E ++ +A+ + RD SG
Sbjct: 176 EGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVS 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>ASPGD|ASPL0000028212 [details] [associations]
symbol:AN10708 species:162425 "Emericella nidulans"
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0019774 "proteasome core complex, beta-subunit
complex" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 EMBL:BN001305 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 OMA:RIMRVND EnsemblFungi:CADANIAT00003268
Uniprot:C8VFE6
Length = 260
Score = 119 (46.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 43/177 (24%), Positives = 76/177 (42%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ---TLY 64
G++++A+ AIA+D TD +R+ K D IG SG +D Q L
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVIGFSGDVSDMQYIDRLL 99
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICT 122
+ + R Y + + + + + +S + Y++R F P + ++AG E KPF+ +
Sbjct: 100 ESIDIREN-YSVHGNQ-LNAKNLHTYLSKVFYKRRSDFNPLWNHILVAGFDSEKKPFLSS 157
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
D +G + + G +F P+ P E +S+ S +DCL
Sbjct: 158 ADLLGTT-FSAPHLATGFGAHLAIPILRRLF-PEERP---IEEISKEDAVSALKDCL 209
>UNIPROTKB|P28074 [details] [associations]
symbol:PSMB5 "Proteasome subunit beta type-5" species:9606
"Homo sapiens" [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 GO:GO:0006979
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AL132780 EMBL:CH471078 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 HOVERGEN:HBG108297
KO:K02737 OMA:QTFAYGV MEROPS:T01.P01 CTD:5693 OrthoDB:EOG4M91S6
EMBL:X95586 EMBL:AK300714 EMBL:AK311895 EMBL:BX538001 EMBL:BC004146
EMBL:BC057840 EMBL:BC107720 EMBL:CD048996 EMBL:BX248299 EMBL:D29011
EMBL:S74378 EMBL:BT006777 IPI:IPI00383971 IPI:IPI00479306
IPI:IPI00910237 PIR:A54589 PIR:I52906 PIR:PC2328 PIR:S08189
RefSeq:NP_001124197.1 RefSeq:NP_001138404.1 RefSeq:NP_002788.1
UniGene:Hs.422990 ProteinModelPortal:P28074 SMR:P28074
DIP:DIP-27540N IntAct:P28074 MINT:MINT-1161576 STRING:P28074
PhosphoSite:P28074 DMDM:187608890 REPRODUCTION-2DPAGE:IPI00479306
PaxDb:P28074 PRIDE:P28074 DNASU:5693 Ensembl:ENST00000361611
Ensembl:ENST00000425762 Ensembl:ENST00000493471 GeneID:5693
KEGG:hsa:5693 UCSC:uc001wii.3 UCSC:uc001wij.3 GeneCards:GC14M023485
HGNC:HGNC:9542 HPA:HPA049518 MIM:600306 neXtProt:NX_P28074
PharmGKB:PA33887 InParanoid:P28074 BindingDB:P28074
ChEMBL:CHEMBL4662 GenomeRNAi:5693 NextBio:22114 ArrayExpress:P28074
Bgee:P28074 CleanEx:HS_PSMB5 Genevestigator:P28074
GermOnline:ENSG00000100804 Uniprot:P28074
Length = 263
Score = 119 (46.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/184 (21%), Positives = 88/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ YG + + D+E ++ ++ +A+ + RD SG +
Sbjct: 176 EGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVN 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>UNIPROTKB|Q5R8S2 [details] [associations]
symbol:PSMB5 "Proteasome subunit beta type-5" species:9601
"Pongo abelii" [GO:0005839 "proteasome core complex" evidence=ISS]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 HOVERGEN:HBG108297 HSSP:P30656
GeneTree:ENSGT00510000046395 KO:K02737 MEROPS:T01.P01 CTD:5693
EMBL:CR859678 RefSeq:NP_001126063.1 UniGene:Pab.3597
ProteinModelPortal:Q5R8S2 SMR:Q5R8S2 PRIDE:Q5R8S2
Ensembl:ENSPPYT00000006682 GeneID:100173015 KEGG:pon:100173015
InParanoid:Q5R8S2 BindingDB:Q5R8S2 Uniprot:Q5R8S2
Length = 263
Score = 119 (46.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/184 (21%), Positives = 88/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ YG + + D+E ++ ++ +A+ + RD SG +
Sbjct: 176 EGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVN 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>DICTYBASE|DDB_G0283679 [details] [associations]
symbol:psmB7 "proteasome subunit beta type 7"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IPI]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 dictyBase:DDB_G0283679 GO:GO:0005634 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006508
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02739 eggNOG:COG0638
InterPro:IPR024689 Pfam:PF12465 MEROPS:T01.011 OMA:GTTIVGC
RefSeq:XP_638961.1 HSSP:P25043 ProteinModelPortal:Q54QR2 SMR:Q54QR2
STRING:Q54QR2 PRIDE:Q54QR2 EnsemblProtists:DDB0232933
GeneID:8624207 KEGG:ddi:DDB_G0283679 ProtClustDB:CLSZ2443204
Uniprot:Q54QR2
Length = 266
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 40/188 (21%), Positives = 89/188 (47%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ +V +V K + +D R + +A + ++I I D ++ +G A D+++
Sbjct: 34 GTTIVGVVYKGGVVLGADTR-ATEGPIVADKNCEKIHYIADNIYCCGAGTAADTESATAL 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + KL++L + + T +++ +L+ ++ + +I G D + P + T+
Sbjct: 93 ISSKLKLHKLSTGKQTRVITALTMLKQMLF--KYQGHISAALILGGIDINGPSLHTIYPH 150
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G+ + +V G+ + EA +K DM +E V++A+ S + D SG V
Sbjct: 151 GSTDQLP-YVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDLGSGSNVDV 209
Query: 187 YIVTPTEI 194
++ P+ +
Sbjct: 210 TVIEPSGV 217
>UNIPROTKB|E2R3R2 [details] [associations]
symbol:PSMB5 "Proteasome subunit beta type" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0006979
GO:GO:0043161 GO:GO:0005839 GO:GO:0004298
GeneTree:ENSGT00510000046395 KO:K02737 OMA:QTFAYGV
EMBL:AAEX03005605 RefSeq:XP_003639276.1 Ensembl:ENSCAFT00000017958
GeneID:100855659 KEGG:cfa:100855659 NextBio:20855291 Uniprot:E2R3R2
Length = 263
Score = 118 (46.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/184 (21%), Positives = 88/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ YG + + D+E ++ ++ +A+ + RD SG +
Sbjct: 176 EGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVN 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>ZFIN|ZDB-GENE-050417-319 [details] [associations]
symbol:psmb8f "proteasome (prosome, macropain)
subunit, beta type, 8f" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 ZFIN:ZDB-GENE-050417-319
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOVERGEN:HBG108297 MEROPS:T01.015 KO:K02740
EMBL:BC092889 IPI:IPI00570076 RefSeq:NP_001017791.1
UniGene:Dr.30161 ProteinModelPortal:Q561X8 SMR:Q561X8 PRIDE:Q561X8
GeneID:550488 KEGG:dre:550488 CTD:550488 NextBio:20879731
Uniprot:Q561X8
Length = 277
Score = 117 (46.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 40/181 (22%), Positives = 81/181 (44%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A D R DF+++ +I+ L +SG A D +R
Sbjct: 71 HGTTTLAFKFQHGVMVAVDSRASAGSYIDTKDFKKVIEINPYLLGTMSGNAADCVYWERR 130
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L ++Y+LR + + + L++ ++ E R ++ G D+ P + + S
Sbjct: 131 LAKECRIYKLRNKTRISVAAASKLLANMVAEYRGMGLSMGTMVCGW-DQRGPGLYYVSSS 189
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + LA D G+ YG ++ + D+ E ++ +A+ + RD SG ++
Sbjct: 190 GTR-LAGDMFSTGSGCNYAYGVMDSGHRWDLTVPEAYDLAERAIYHATHRDAYSGGVVNM 248
Query: 187 Y 187
Y
Sbjct: 249 Y 249
>POMBASE|SPAC23D3.07 [details] [associations]
symbol:pup1 "20S proteasome complex subunit beta 2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IC] [GO:0019774
"proteasome core complex, beta-subunit complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
PomBase:SPAC23D3.07 GO:GO:0005829 GO:GO:0007346 GO:GO:0005635
EMBL:CU329670 GO:GO:0043161 GO:GO:0004298 KO:K02739 eggNOG:COG0638
HOGENOM:HOG000182856 InterPro:IPR024689 Pfam:PF12465 GO:GO:0019774
EMBL:AB000540 PIR:T38282 RefSeq:NP_594544.1
ProteinModelPortal:Q09841 SMR:Q09841 STRING:Q09841 MEROPS:T01.011
PRIDE:Q09841 EnsemblFungi:SPAC23D3.07.1 GeneID:2541805
KEGG:spo:SPAC23D3.07 OMA:GTTIVGC OrthoDB:EOG4V46HP NextBio:20802893
Uniprot:Q09841
Length = 267
Score = 116 (45.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 37/176 (21%), Positives = 78/176 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +V ++ K+C + +D R + +++ I ++ +G A D++ + +
Sbjct: 35 GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMI 94
Query: 68 VFRHKLYQLREERDMKPETFASLVSALL--YEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+L+ L R + T +++ L Y+ G Y V+ G D P + T+ +
Sbjct: 95 SSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYL---VLGGY-DCKGPHLFTIAA 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G+ + +V G+ + E ++PD+E E E V +A+ + + D SG
Sbjct: 151 HGSSDKLP-YVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSG 205
>UNIPROTKB|Q3T112 [details] [associations]
symbol:PSMB8 "Proteasome subunit beta type-8" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0045444 "fat cell differentiation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019882 "antigen processing and presentation" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737
GO:GO:0045444 EMBL:AY957499 GO:GO:0051603 GO:GO:0019882
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000091082
HOVERGEN:HBG108297 GeneTree:ENSGT00510000046395 EMBL:BC102170
IPI:IPI00726885 RefSeq:NP_001035570.1 UniGene:Bt.53697
ProteinModelPortal:Q3T112 SMR:Q3T112 STRING:Q3T112 MEROPS:T01.015
Ensembl:ENSBTAT00000003955 GeneID:282013 KEGG:bta:282013 CTD:5696
InParanoid:Q3T112 KO:K02740 OMA:MQPTEFL OrthoDB:EOG4WM4V9
NextBio:20805879 ArrayExpress:Q3T112 Uniprot:Q3T112
Length = 276
Score = 116 (45.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 41/183 (22%), Positives = 84/183 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY-Q 65
+G+ +A ++ +A D R ++ +I+ L +SG A D LY +
Sbjct: 71 HGTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPYLLGTMSGCAADC--LYWE 128
Query: 66 RLVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
RL+ + +LY LR + + L+S ++ + R +I G D+ P + +D
Sbjct: 129 RLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGW-DKKGPGLYYVD 187
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
G + L+ + G+ YG ++ ++PD+ +E ++ +A++ + RD SG
Sbjct: 188 ENGTR-LSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVV 246
Query: 185 HVY 187
++Y
Sbjct: 247 NMY 249
>MGI|MGI:1346527 [details] [associations]
symbol:Psmb8 "proteasome (prosome, macropain) subunit, beta
type 8 (large multifunctional peptidase 7)" species:10090 "Mus
musculus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019882 "antigen processing and presentation" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045444 "fat
cell differentiation" evidence=ISO;IMP] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 MGI:MGI:1346527 GO:GO:0005829 GO:GO:0005634
GO:GO:0045444 Reactome:REACT_102124 GO:GO:0051603 GO:GO:0019882
EMBL:AF027865 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 PDB:3UNF
PDB:3UNH PDBsum:3UNF PDBsum:3UNH HOGENOM:HOG000091082
HOVERGEN:HBG108297 GeneTree:ENSGT00510000046395 MEROPS:T01.015
CTD:5696 KO:K02740 OMA:MQPTEFL OrthoDB:EOG4WM4V9 EMBL:X64449
EMBL:L11145 EMBL:Z21847 EMBL:U22031 EMBL:U22032 EMBL:U22033
EMBL:U22034 EMBL:U22035 EMBL:AK031801 EMBL:AK050627 EMBL:AK146182
EMBL:AK150674 EMBL:AK159971 EMBL:BC013785 EMBL:BC051450
IPI:IPI00116712 PIR:I54513 RefSeq:NP_034854.2 UniGene:Mm.180191
UniGene:Mm.484878 ProteinModelPortal:P28063 SMR:P28063
IntAct:P28063 STRING:P28063 PhosphoSite:P28063 PaxDb:P28063
PRIDE:P28063 Ensembl:ENSMUST00000025196 GeneID:16913 KEGG:mmu:16913
UCSC:uc012apv.1 InParanoid:P28063 ChEMBL:CHEMBL1944492
NextBio:290960 Bgee:P28063 Genevestigator:P28063
GermOnline:ENSMUSG00000024338 Uniprot:P28063
Length = 276
Score = 116 (45.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 40/182 (21%), Positives = 83/182 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A D R + ++ +I+ L +SG A D Q ++R
Sbjct: 71 HGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQ-YWER 129
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ + +LY LR + + L+S ++ + R +I G D+ P + +D
Sbjct: 130 LLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGW-DKKGPGLYYVDD 188
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + L+ G+ YG ++ ++ D+ P+E ++ +A+ + RD SG +
Sbjct: 189 NGTR-LSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVN 247
Query: 186 VY 187
+Y
Sbjct: 248 MY 249
>UNIPROTKB|F1S9C9 [details] [associations]
symbol:LOC100155139 "Proteasome subunit beta type"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 GeneTree:ENSGT00510000046395
OMA:QTFAYGV EMBL:CU468526 Ensembl:ENSSSCT00000002278 Uniprot:F1S9C9
Length = 263
Score = 115 (45.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/184 (21%), Positives = 87/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A + +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ YG + + D+E ++ ++ +A+ + RD SG +
Sbjct: 176 EGNRISGATFSV-GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGSVN 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>ZFIN|ZDB-GENE-990415-141 [details] [associations]
symbol:psmb8 "proteasome (prosome, macropain)
subunit, beta type, 8" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005839 "proteasome core complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 ZFIN:ZDB-GENE-990415-141 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HOVERGEN:HBG108297 HSSP:P30656 MEROPS:T01.015 CTD:5696 KO:K02740
EMBL:BC066288 IPI:IPI00491833 RefSeq:NP_571467.2 UniGene:Dr.7957
ProteinModelPortal:Q6NZ73 SMR:Q6NZ73 STRING:Q6NZ73 GeneID:30666
KEGG:dre:30666 InParanoid:Q6NZ73 NextBio:20807021
ArrayExpress:Q6NZ73 Uniprot:Q6NZ73
Length = 271
Score = 115 (45.5 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 40/182 (21%), Positives = 83/182 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A D R + + ++ +I+ L +SG A D Q ++R
Sbjct: 66 HGTTTLAFKFRHGVIVAVDSRASAGKYIDSKEANKVIEINPYLLGTMSGSAADCQ-YWER 124
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ + +LY+LR ++ + + L+S ++ R +I G D+ P + +D
Sbjct: 125 LLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMGLSMGSMICGW-DKQGPGLYYVDD 183
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + + F G YG ++ ++ DM +E +E + + + RD SG +
Sbjct: 184 NGTRLSGRMFST-GCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVN 242
Query: 186 VY 187
+Y
Sbjct: 243 LY 244
>UNIPROTKB|A5D9J6 [details] [associations]
symbol:PSMB8 "Proteasome subunit beta type" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOVERGEN:HBG108297 GeneTree:ENSGT00510000046395
MEROPS:T01.015 EMBL:BX323833 UniGene:Ssc.11073
ProteinModelPortal:A5D9J6 SMR:A5D9J6 STRING:A5D9J6
Ensembl:ENSSSCT00000033629 ArrayExpress:A5D9J6 Uniprot:A5D9J6
Length = 208
Score = 112 (44.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 40/182 (21%), Positives = 83/182 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A D R ++ +I+ L +SG A D Q ++R
Sbjct: 3 HGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPYLLGTMSGSAADCQ-YWER 61
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ + +LY LR + + L+S ++Y+ R +I G D+ P + +D
Sbjct: 62 LLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRGMGLSMGSMICGW-DKKGPGLYYVDE 120
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + L+ + G+ YG ++ + D+ +E ++ +A++ + RD SG +
Sbjct: 121 NGTR-LSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRDSYSGGVVN 179
Query: 186 VY 187
+Y
Sbjct: 180 MY 181
>TAIR|locus:2128111 [details] [associations]
symbol:PBA1 species:3702 "Arabidopsis thaliana"
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005839 "proteasome core complex"
evidence=IEA;TAS] [GO:0008233 "peptidase activity"
evidence=ISS;IMP] [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0010363 "regulation of plant-type
hypersensitive response" evidence=IMP] [GO:0010043 "response to
zinc ion" evidence=IEP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0006833 "water transport" evidence=RCA]
[GO:0006972 "hyperosmotic response" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0009266 "response to
temperature stimulus" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=RCA] [GO:0043248 "proteasome
assembly" evidence=RCA] [GO:0046686 "response to cadmium ion"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005829 GO:GO:0005634
GO:GO:0005774 EMBL:CP002687 GO:GO:0010043 GO:GO:0009651
GO:GO:0000502 GO:GO:0008233 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 MEROPS:T01.010 KO:K02738 OMA:NLGTSIM GO:GO:0010363
IPI:IPI00656768 RefSeq:NP_001031759.1 UniGene:At.24496
ProteinModelPortal:F4JRY2 SMR:F4JRY2 PRIDE:F4JRY2
EnsemblPlants:AT4G31300.2 GeneID:829257 KEGG:ath:AT4G31300
Uniprot:F4JRY2
Length = 234
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 39/178 (21%), Positives = 83/178 (46%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL-- 63
G+ ++ + + +D R G+ + A+D +I+++ D +++ SG A DSQ +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASD--KITQLTDNVYVCRSGSAADSQVVSD 69
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
Y R F H+ + ++ + + A+L+ L Y + ++ G + I +
Sbjct: 70 YVRY-FLHQ-HTIQHGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYEGGKIYGI 127
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+G + + F + G+ LYG + +K +M +E + V +A+ ++ RD SG
Sbjct: 128 P-LGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASG 184
>MGI|MGI:1194513 [details] [associations]
symbol:Psmb5 "proteasome (prosome, macropain) subunit, beta
type 5" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0008233 "peptidase
activity" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0051603 "proteolysis involved
in cellular protein catabolic process" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 MGI:MGI:1194513 GO:GO:0005829 GO:GO:0005634
GO:GO:0006979 GO:GO:0043161 GO:GO:0008233 Reactome:REACT_102124
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 PDB:3UNB PDB:3UNE
PDBsum:3UNB PDBsum:3UNE HOGENOM:HOG000091082 HOVERGEN:HBG108297
GeneTree:ENSGT00510000046395 KO:K02737 OMA:QTFAYGV MEROPS:T01.P01
CTD:5693 EMBL:AB003304 EMBL:AB003306 EMBL:AF060091 EMBL:AK010441
EMBL:AK133839 EMBL:BC012246 EMBL:BC106144 IPI:IPI00317902
RefSeq:NP_035316.1 UniGene:Mm.8911 ProteinModelPortal:O55234
SMR:O55234 IntAct:O55234 STRING:O55234 PhosphoSite:O55234
PaxDb:O55234 PRIDE:O55234 Ensembl:ENSMUST00000022803 GeneID:19173
KEGG:mmu:19173 UCSC:uc007twl.1 InParanoid:O55234
ChEMBL:CHEMBL1944494 NextBio:295850 Bgee:O55234
Genevestigator:O55234 GermOnline:ENSMUSG00000022193 Uniprot:O55234
Length = 264
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 39/184 (21%), Positives = 87/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A + +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ YG + + D++ +E ++ +A+ + RD SG +
Sbjct: 176 EGNRISGTAFSV-GSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVN 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>ZFIN|ZDB-GENE-040718-353 [details] [associations]
symbol:psmb2 "proteasome (prosome, macropain)
subunit, beta type, 2" species:7955 "Danio rerio" [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476
ZFIN:ZDB-GENE-040718-353 GO:GO:0005634 GO:GO:0005737 GO:GO:0051603
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000188743
KO:K02734 OMA:MPIDFKG CTD:5690 GeneTree:ENSGT00640000091536
HOVERGEN:HBG000815 OrthoDB:EOG4MSD09 EMBL:CU928077 EMBL:CU929178
EMBL:BC075983 IPI:IPI00484770 RefSeq:NP_001002609.1
UniGene:Dr.80734 SMR:Q6DHI9 STRING:Q6DHI9
Ensembl:ENSDART00000041114 GeneID:436882 KEGG:dre:436882
InParanoid:Q6DHI9 NextBio:20831310 Uniprot:Q6DHI9
Length = 199
Score = 110 (43.8 bits), Expect = 0.00013, P = 0.00013
Identities = 34/163 (20%), Positives = 72/163 (44%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
L+ + G + +A+D + + D+ ++ K+ +++ + G A D+ + +
Sbjct: 4 LIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 71 HKLYQLREERDMKPETFASLVSALL--YEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+LY++R ++ P A+ L Y + PY ++AG + D P + MD + A
Sbjct: 64 VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSA 123
Query: 129 KELAK-DFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQAL 170
LAK F G + ++PD+ +E + + + L
Sbjct: 124 --LAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCL 164
>CGD|CAL0000797 [details] [associations]
symbol:PUP1 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0019774 "proteasome core
complex, beta-subunit complex" evidence=IEA] [GO:0034515
"proteasome storage granule" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0010499 "proteasomal ubiquitin-independent protein catabolic
process" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS51476
CGD:CAL0000797 GO:GO:0005634 GO:GO:0005737 EMBL:AACQ01000032
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02739 eggNOG:COG0638
HOGENOM:HOG000182856 InterPro:IPR024689 Pfam:PF12465 MEROPS:T01.011
RefSeq:XP_719367.1 ProteinModelPortal:Q5ACN7 SMR:Q5ACN7
STRING:Q5ACN7 GeneID:3638936 KEGG:cal:CaO19.7605 Uniprot:Q5ACN7
Length = 272
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +V K+ IA+D R + +++ ++ +++ +G A D++ + Q +
Sbjct: 29 GTTIVGCKFKDGVVIAADTRATSGPIVADKNCEKLHRLAPKIWCAGAGTAADTEMVTQLI 88
Query: 68 VFRHKLYQLREERDMKPETFASLVSA----LLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+L+ L + R +P A+L Y+ G Y ++AG+ D + ++
Sbjct: 89 ASNLELHALSQNR--QPRVIAALTMLKQHLFKYQGHLGAYL---IVAGV-DPTGAHLMSV 142
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+ G+ ++ K + G+ + E FK DM DE + S A+L+ V D SG
Sbjct: 143 QAHGSTDIGK-YQSLGSGSLNAMAVLETNFKEDMTRDEAIKLCSDAILAGVWNDLGSG 199
>UNIPROTKB|A5D9J4 [details] [associations]
symbol:PSMB8 "Proteasome subunit beta type" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOGENOM:HOG000091082 HOVERGEN:HBG108297
GeneTree:ENSGT00510000046395 MEROPS:T01.015 CTD:5696 KO:K02740
OMA:MQPTEFL EMBL:BX323833 EMBL:CU633196 RefSeq:XP_001924154.2
UniGene:Ssc.11073 ProteinModelPortal:A5D9J4 SMR:A5D9J4
STRING:A5D9J4 Ensembl:ENSSSCT00000001622 Ensembl:ENSSSCT00000001623
GeneID:100153464 KEGG:ssc:100153464 ArrayExpress:A5D9J4
Uniprot:A5D9J4
Length = 276
Score = 112 (44.5 bits), Expect = 0.00019, P = 0.00019
Identities = 40/182 (21%), Positives = 83/182 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A D R ++ +I+ L +SG A D Q ++R
Sbjct: 71 HGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPYLLGTMSGSAADCQ-YWER 129
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ + +LY LR + + L+S ++Y+ R +I G D+ P + +D
Sbjct: 130 LLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRGMGLSMGSMICGW-DKKGPGLYYVDE 188
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + L+ + G+ YG ++ + D+ +E ++ +A++ + RD SG +
Sbjct: 189 NGTR-LSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRDSYSGGVVN 247
Query: 186 VY 187
+Y
Sbjct: 248 MY 249
>WB|WBGene00003953 [details] [associations]
symbol:pbs-7 species:6239 "Caenorhabditis elegans"
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR001353 InterPro:IPR016295
InterPro:IPR023333 Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS51476
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0000003 GO:GO:0051603 EMBL:Z81079 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000181719 KO:K02736
OMA:RIMRVND GeneTree:ENSGT00390000000698 PIR:T22003
RefSeq:NP_492354.1 ProteinModelPortal:P90868 SMR:P90868
DIP:DIP-26967N IntAct:P90868 MINT:MINT-211920 STRING:P90868
MEROPS:T01.A08 PaxDb:P90868 EnsemblMetazoa:F39H11.5 GeneID:172674
KEGG:cel:CELE_F39H11.5 UCSC:F39H11.5.1 CTD:172674 WormBase:F39H11.5
InParanoid:P90868 NextBio:876521 Uniprot:P90868
Length = 236
Score = 110 (43.8 bits), Expect = 0.00023, P = 0.00023
Identities = 43/185 (23%), Positives = 82/185 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G++++A+ K + +DR + + R K++D + I G D L Q +
Sbjct: 17 GTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGGDHADFHWL-QNV 75
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDK-------P 118
+ R L R ++D+ P+ +++LLY KR P + V+AG+ +E+K P
Sbjct: 76 IERQVLLWKRFDQDIGPKALHGYLTSLLYAKRCKMNPVWNTLVVAGVEEEEKNNKETSTP 135
Query: 119 FICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKP---DMEPDELFETVSQALLSSVD 175
FI + G K + G L A E ++ D+ +E + ++L ++
Sbjct: 136 FIGVITQKGCAYQVKH-IATGLGAFLLNQAVEDEWRKKGEDLSREEAEAVLRKSLELTLY 194
Query: 176 RDCLS 180
DC++
Sbjct: 195 HDCVA 199
>RGD|61879 [details] [associations]
symbol:Psmb5 "proteasome (prosome, macropain) subunit, beta type
5" species:10116 "Rattus norvegicus" [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=IEA;ISO;ISS] [GO:0006979
"response to oxidative stress" evidence=IEA;ISO] [GO:0008233
"peptidase activity" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 RGD:61879 GO:GO:0005634
GO:GO:0005737 GO:GO:0006979 GO:GO:0043161 EMBL:CH474049
GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638 HOGENOM:HOG000091082
HOVERGEN:HBG108297 KO:K02737 MEROPS:T01.P01 CTD:5693
OrthoDB:EOG4M91S6 EMBL:D45247 IPI:IPI00869998 PIR:S09087
RefSeq:NP_001099197.2 UniGene:Rn.2 ProteinModelPortal:P28075
SMR:P28075 IntAct:P28075 STRING:P28075 PhosphoSite:P28075
PRIDE:P28075 GeneID:29425 KEGG:rno:29425 UCSC:RGD:61879
InParanoid:P28075 NextBio:609128 Genevestigator:P28075
GermOnline:ENSRNOG00000013386 Uniprot:P28075
Length = 263
Score = 111 (44.1 bits), Expect = 0.00023, P = 0.00023
Identities = 38/184 (20%), Positives = 88/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ +G + + D++ +E ++ +A+ + RD SG +
Sbjct: 176 EGNRISGTAFSV-GSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVN 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>UNIPROTKB|P28075 [details] [associations]
symbol:Psmb5 "Proteasome subunit beta type-5" species:10116
"Rattus norvegicus" [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
RGD:61879 GO:GO:0005634 GO:GO:0005737 GO:GO:0006979 GO:GO:0043161
EMBL:CH474049 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
HOGENOM:HOG000091082 HOVERGEN:HBG108297 KO:K02737 MEROPS:T01.P01
CTD:5693 OrthoDB:EOG4M91S6 EMBL:D45247 IPI:IPI00869998 PIR:S09087
RefSeq:NP_001099197.2 UniGene:Rn.2 ProteinModelPortal:P28075
SMR:P28075 IntAct:P28075 STRING:P28075 PhosphoSite:P28075
PRIDE:P28075 GeneID:29425 KEGG:rno:29425 UCSC:RGD:61879
InParanoid:P28075 NextBio:609128 Genevestigator:P28075
GermOnline:ENSRNOG00000013386 Uniprot:P28075
Length = 263
Score = 111 (44.1 bits), Expect = 0.00023, P = 0.00023
Identities = 38/184 (20%), Positives = 88/184 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A+D R + +++ +I+ L ++G A D + ++R
Sbjct: 58 HGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 116
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + +I G D+ P + +DS
Sbjct: 117 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW-DKRGPGLYYVDS 175
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ +G + + D++ +E ++ +A+ + RD SG +
Sbjct: 176 EGNRISGTAFSV-GSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVN 234
Query: 186 VYIV 189
+Y V
Sbjct: 235 LYHV 238
>DICTYBASE|DDB_G0293784 [details] [associations]
symbol:psmB5 "proteasome subunit beta type 5"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IPI]
[GO:0005634 "nucleus" evidence=IEA;IPI] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0004175
"endopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 dictyBase:DDB_G0293784 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0051603
EMBL:AAFI02000219 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
HSSP:P30656 KO:K02737 OMA:QTFAYGV RefSeq:XP_628966.1
ProteinModelPortal:Q54BC8 SMR:Q54BC8 STRING:Q54BC8 MEROPS:T01.012
EnsemblProtists:DDB0232959 GeneID:8629394 KEGG:ddi:DDB_G0293784
ProtClustDB:PTZ00488 Uniprot:Q54BC8
Length = 272
Score = 110 (43.8 bits), Expect = 0.00032, P = 0.00032
Identities = 44/185 (23%), Positives = 85/185 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+G+ +A V ++ D + Q +A+ +++ +I L ++G A D +
Sbjct: 61 HGTTTLAFVYGGGIIVSVDSK-STQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWER 119
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYE-KRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R +LY+LR + + + +++ ++Y K +G +I G D+ P + +D
Sbjct: 120 ELGRRCRLYELRNKELISVAAASKILANIVYSYKGYG-LSMGTMITGW-DKTGPQLYYVD 177
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
+ G + + F G+ YG + FK DM +E +E +A+ + RD SG
Sbjct: 178 NDGTRLHGQRFS-CGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAI 236
Query: 185 HVYIV 189
+VY V
Sbjct: 237 NVYHV 241
>ASPGD|ASPL0000016372 [details] [associations]
symbol:AN3932 species:162425 "Emericella nidulans"
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019774
"proteasome core complex, beta-subunit complex" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0080129
"proteasome core complex assembly" evidence=IEA] [GO:0010499
"proteasomal ubiquitin-independent protein catabolic process"
evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 EMBL:BN001302 GO:GO:0051603
EMBL:AACD01000064 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
HOGENOM:HOG000091082 KO:K02737 OMA:QTFAYGV MEROPS:T01.012
OrthoDB:EOG47WRXH RefSeq:XP_661536.1 ProteinModelPortal:Q5B698
SMR:Q5B698 STRING:Q5B698 EnsemblFungi:CADANIAT00004762
GeneID:2873358 KEGG:ani:AN3932.2 Uniprot:Q5B698
Length = 296
Score = 110 (43.8 bits), Expect = 0.00038, P = 0.00038
Identities = 33/138 (23%), Positives = 71/138 (51%)
Query: 53 LSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYE-KRFGPYFCQPVIAG 111
++G A D Q + L + L+++R +R + + +++ L Y K +G ++AG
Sbjct: 127 MAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYG-LSMGTMLAG 185
Query: 112 LSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALL 171
++ ++ P + +DS G + L + G+ YG +A ++ D+ +E E +++L
Sbjct: 186 VTPQEGPALYYIDSDGTR-LPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSIL 244
Query: 172 SSVDRDCLSGWGGHVYIV 189
+++ RD SG ++Y V
Sbjct: 245 AAMHRDAYSGGFINLYHV 262
>FB|FBgn0250746 [details] [associations]
symbol:Prosbeta7 "Proteasome beta7 subunit" species:7227
"Drosophila melanogaster" [GO:0005839 "proteasome core complex"
evidence=ISS;NAS] [GO:0004175 "endopeptidase activity"
evidence=ISS;NAS] [GO:0006508 "proteolysis" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0004298 "threonine-type endopeptidase activity" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0051297 "centrosome organization" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR016295 InterPro:IPR023333
Pfam:PF00227 PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476
EMBL:AE014297 GO:GO:0005634 GO:GO:0005737 GO:GO:0022008
GO:GO:0051297 GO:GO:0008283 GO:GO:0006974 GO:GO:0000022
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 eggNOG:COG0638
MEROPS:T01.987 KO:K02736 OMA:RIMRVND GeneTree:ENSGT00390000000698
EMBL:AY118936 RefSeq:NP_649529.1 RefSeq:NP_730922.1
UniGene:Dm.11642 ProteinModelPortal:Q9VNA5 SMR:Q9VNA5
DIP:DIP-19164N IntAct:Q9VNA5 MINT:MINT-924269 STRING:Q9VNA5
PaxDb:Q9VNA5 PRIDE:Q9VNA5 EnsemblMetazoa:FBtr0078805
EnsemblMetazoa:FBtr0078806 GeneID:40639 KEGG:dme:Dmel_CG12000
CTD:40639 FlyBase:FBgn0250746 InParanoid:Q9VNA5 OrthoDB:EOG4Q575B
PhylomeDB:Q9VNA5 GenomeRNAi:40639 NextBio:819792 Bgee:Q9VNA5
GermOnline:CG12000 Uniprot:Q9VNA5
Length = 268
Score = 109 (43.4 bits), Expect = 0.00042, P = 0.00042
Identities = 27/104 (25%), Positives = 57/104 (54%)
Query: 38 DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER-DMKPETFASLVSALLY 96
+ +R+ K++ + +G SG D Q++ + + + Q ++ +MKP++ AS ++ +LY
Sbjct: 87 NIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLY 146
Query: 97 EKR--FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVA 138
+R P + V+ G+ +E P++ +D G +D+VVA
Sbjct: 147 NRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSY--EDYVVA 188
>UNIPROTKB|A5D9J1 [details] [associations]
symbol:PSMB9 "Proteasome (Prosome, macropain) subunit, beta
type, 9 (Large multifunctional protease 2)" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0005839 "proteasome core
complex" evidence=IEA] [GO:0004298 "threonine-type endopeptidase
activity" evidence=IEA] InterPro:IPR001353 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS51476 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 HOGENOM:HOG000091079 GeneTree:ENSGT00510000046484
HOVERGEN:HBG000123 KO:K02741 EMBL:BX323833 UniGene:Ssc.95136
UniGene:Ssc.12758 STRING:A5D9J1 Ensembl:ENSSSCT00000001632
KEGG:ssc:100520085 KEGG:ssc:654294 Uniprot:A5D9J1
Length = 175
Score = 104 (41.7 bits), Expect = 0.00045, P = 0.00045
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
++G + + F + G+ +YG +A +KP M P+E + A+ +++RD SG G
Sbjct: 90 TMGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMNRDGSSG--G 147
Query: 185 HVYIVTPTE--IKERILKG 201
+Y+VT T + R++ G
Sbjct: 148 VIYLVTITAAGVDHRVILG 166
>DICTYBASE|DDB_G0272831 [details] [associations]
symbol:psmA7 "proteasome subunit alpha type 7"
species:44689 "Dictyostelium discoideum" [GO:0008233 "peptidase
activity" evidence=IEA;IDA] [GO:0006508 "proteolysis"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0019773 "proteasome core complex, alpha-subunit complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000426 InterPro:IPR001353
InterPro:IPR023332 Pfam:PF00227 Pfam:PF10584 PROSITE:PS00388
PROSITE:PS51475 SMART:SM00948 dictyBase:DDB_G0272831 GO:GO:0005634
GO:GO:0005737 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000008 GO:GO:0006511 GO:GO:0004298 eggNOG:COG0638
GO:GO:0019773 MEROPS:T01.974 KO:K02731 OMA:NRAQVEC EMBL:L22213
RefSeq:XP_644940.1 ProteinModelPortal:P34120 SMR:P34120
STRING:P34120 PRIDE:P34120 EnsemblProtists:DDB0185059
GeneID:8618619 KEGG:ddi:DDB_G0272831 ProtClustDB:CLSZ2431267
Uniprot:P34120
Length = 250
Score = 108 (43.1 bits), Expect = 0.00047, P = 0.00047
Identities = 37/172 (21%), Positives = 76/172 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + GK+ + +++ +LQ A ++I K+ D + + +GL DS+ L +
Sbjct: 32 GTVAVGVRGKDVIVLGVEKKATAKLQD-ARSIRKIVKLDDHICLTFAGLTADSRVLISKA 90
Query: 68 VFRHKLYQLREERDMKPETFASLVSALL--YEKRFG--PYFCQPVIAGLSDEDKPFICTM 123
+ + Y+L E E + ++ + Y + G P+ +I G + P +
Sbjct: 91 LMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLYQT 150
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
D G+ K + G + +S+ E + D+ +E + +ALL V+
Sbjct: 151 DPSGSYSSWKAAAI-GRSSKSVGEFLEKNYT-DVSEEESIKLAVRALLEIVE 200
>UNIPROTKB|E2RPC6 [details] [associations]
symbol:PSMB7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0005839 "proteasome
core complex" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
GeneTree:ENSGT00510000046533 InterPro:IPR024689 Pfam:PF12465
OMA:GTTIVGC EMBL:AAEX03006891 Ensembl:ENSCAFT00000032210
Uniprot:E2RPC6
Length = 284
Score = 108 (43.1 bits), Expect = 0.00062, P = 0.00062
Identities = 38/187 (20%), Positives = 83/187 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + +V K+ + +D R + + +I I ++ +G A D+ Q +
Sbjct: 50 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 109
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+L+ L R + T ++ +L+ R+ Y ++ G D P + ++ G
Sbjct: 110 SSNLELHSLSTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGPHLYSIYPHG 167
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + +V G+ + E F+PDME +E + VS+A+ + V D SG +
Sbjct: 168 STDKLP-YVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGVFNDLGSGSNIDLC 226
Query: 188 IVTPTEI 194
+++ +++
Sbjct: 227 VISKSKL 233
>UNIPROTKB|F1NZ80 [details] [associations]
symbol:PSMB2 "Proteasome subunit beta type" species:9031
"Gallus gallus" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA]
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PROSITE:PS00854 PROSITE:PS51476 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 OMA:MPIDFKG
GeneTree:ENSGT00640000091536 EMBL:AADN02043833 IPI:IPI00588689
Ensembl:ENSGALT00000003740 Uniprot:F1NZ80
Length = 210
Score = 105 (42.0 bits), Expect = 0.00068, P = 0.00068
Identities = 35/163 (21%), Positives = 70/163 (42%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
L+ + G + +A+D + + D ++ K+ +++ + G A D+ + +
Sbjct: 13 LIGIQGPDYVLVAADTVAASSIVQMKHDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 72
Query: 71 HKLYQLREERDMKPETFASLVSALL--YEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+LY++R ++ P A+ L Y + PY ++AG D + P + MD + A
Sbjct: 73 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDDHEGPALYYMDYLAA 132
Query: 129 KELAK-DFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQAL 170
LAK F G + +KP + +E E + + L
Sbjct: 133 --LAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKKCL 173
>UNIPROTKB|F1MBI1 [details] [associations]
symbol:PSMB7 "Proteasome subunit beta type" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 GeneTree:ENSGT00510000046533 InterPro:IPR024689
Pfam:PF12465 OMA:GTTIVGC IPI:IPI00712187 UniGene:Bt.56882
EMBL:DAAA02032105 Ensembl:ENSBTAT00000003990 Uniprot:F1MBI1
Length = 277
Score = 107 (42.7 bits), Expect = 0.00077, P = 0.00077
Identities = 37/187 (19%), Positives = 83/187 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + +V K+ + +D R + + +I I ++ +G A D+ Q +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+L+ L R + T ++ +L+ R+ Y ++ G D P + ++ G
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGPHLYSIYPHG 160
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + +V G+ + E F+PDME +E + VS+A+ + + D SG +
Sbjct: 161 STDKLP-YVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLC 219
Query: 188 IVTPTEI 194
+++ +++
Sbjct: 220 VISKSKL 226
>UNIPROTKB|Q2TBP0 [details] [associations]
symbol:PSMB7 "Proteasome subunit beta type-7" species:9913
"Bos taurus" [GO:0005839 "proteasome core complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 KO:K02739 eggNOG:COG0638 PDB:1IRU PDBsum:1IRU
HOGENOM:HOG000182856 HOVERGEN:HBG093416 OrthoDB:EOG41VK3Q
InterPro:IPR024689 Pfam:PF12465 MEROPS:T01.011 EMBL:BC109868
IPI:IPI00712187 RefSeq:NP_001033616.1 UniGene:Bt.56882
ProteinModelPortal:Q2TBP0 SMR:Q2TBP0 STRING:Q2TBP0 PRIDE:Q2TBP0
GeneID:511207 KEGG:bta:511207 CTD:5695 InParanoid:Q2TBP0
EvolutionaryTrace:Q2TBP0 NextBio:20869822 Uniprot:Q2TBP0
Length = 277
Score = 107 (42.7 bits), Expect = 0.00077, P = 0.00077
Identities = 37/187 (19%), Positives = 83/187 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + +V K+ + +D R + + +I I ++ +G A D+ Q +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+L+ L R + T ++ +L+ R+ Y ++ G D P + ++ G
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGPHLYSIYPHG 160
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + +V G+ + E F+PDME +E + VS+A+ + + D SG +
Sbjct: 161 STDKLP-YVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLC 219
Query: 188 IVTPTEI 194
+++ +++
Sbjct: 220 VISKSKL 226
>MGI|MGI:107637 [details] [associations]
symbol:Psmb7 "proteasome (prosome, macropain) subunit, beta
type 7" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
MGI:MGI:107637 GO:GO:0005829 GO:GO:0005634 Reactome:REACT_102124
GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02739 eggNOG:COG0638
PDB:3UNB PDB:3UNE PDBsum:3UNB PDBsum:3UNE
GeneTree:ENSGT00510000046533 HOGENOM:HOG000182856
HOVERGEN:HBG093416 OrthoDB:EOG41VK3Q InterPro:IPR024689
Pfam:PF12465 MEROPS:T01.011 OMA:GTTIVGC CTD:5695 EMBL:D83585
EMBL:Y10874 EMBL:D85570 EMBL:AK002823 EMBL:AK012613 EMBL:AK013961
EMBL:AK075759 EMBL:AK088276 EMBL:AK088765 EMBL:AK168823
EMBL:BC057662 IPI:IPI00136483 PIR:JC6122 RefSeq:NP_035317.1
UniGene:Mm.389251 ProteinModelPortal:P70195 SMR:P70195
IntAct:P70195 STRING:P70195 PhosphoSite:P70195
REPRODUCTION-2DPAGE:IPI00136483 REPRODUCTION-2DPAGE:P70195
PaxDb:P70195 PRIDE:P70195 Ensembl:ENSMUST00000028083 GeneID:19177
KEGG:mmu:19177 InParanoid:P70195 NextBio:295860 Bgee:P70195
Genevestigator:P70195 GermOnline:ENSMUSG00000026750 Uniprot:P70195
Length = 277
Score = 107 (42.7 bits), Expect = 0.00077, P = 0.00077
Identities = 37/187 (19%), Positives = 83/187 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + +V K+ + +D R + + +I I ++ +G A D+ Q +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+L+ L R + T ++ +L+ R+ Y ++ G D P + ++ G
Sbjct: 103 SSNLELHSLTTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGPHLYSIYPHG 160
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + +V G+ + E F+PDME +E + VS+A+ + + D SG +
Sbjct: 161 STDKLP-YVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLC 219
Query: 188 IVTPTEI 194
+++ +++
Sbjct: 220 VISKSKL 226
>RGD|621093 [details] [associations]
symbol:Psmb7 "proteasome (prosome, macropain) subunit, beta type
7" species:10116 "Rattus norvegicus" [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005839
"proteasome core complex" evidence=ISO;ISS] [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] InterPro:IPR000243 InterPro:IPR001353
InterPro:IPR016050 InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141
PROSITE:PS00854 PROSITE:PS51476 RGD:621093 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298 KO:K02739
eggNOG:COG0638 GeneTree:ENSGT00510000046533 HOGENOM:HOG000182856
HOVERGEN:HBG093416 OrthoDB:EOG41VK3Q InterPro:IPR024689
Pfam:PF12465 MEROPS:T01.011 OMA:GTTIVGC CTD:5695 EMBL:AF285103
EMBL:BC060551 IPI:IPI00199980 PIR:S09082 RefSeq:NP_445984.1
UniGene:Rn.3846 ProteinModelPortal:Q9JHW0 SMR:Q9JHW0 IntAct:Q9JHW0
STRING:Q9JHW0 World-2DPAGE:0004:Q9JHW0 PRIDE:Q9JHW0
Ensembl:ENSRNOT00000016876 GeneID:85492 KEGG:rno:85492
UCSC:RGD:621093 InParanoid:Q9JHW0 NextBio:617584
Genevestigator:Q9JHW0 GermOnline:ENSRNOG00000011732 Uniprot:Q9JHW0
Length = 277
Score = 107 (42.7 bits), Expect = 0.00077, P = 0.00077
Identities = 37/187 (19%), Positives = 83/187 (44%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + +V K+ + +D R + + +I I ++ +G A D+ Q +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+L+ L R + T ++ +L+ R+ Y ++ G D P + ++ G
Sbjct: 103 SSNLELHSLTTGRLPRVVTANRMLKQMLF--RYQGYIGAALVLGGVDVTGPHLYSIYPHG 160
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + +V G+ + E F+PDME +E + VS+A+ + + D SG +
Sbjct: 161 STDKLP-YVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLC 219
Query: 188 IVTPTEI 194
+++ +++
Sbjct: 220 VISKSKL 226
>SGD|S000005398 [details] [associations]
symbol:PRE6 "Alpha 4 subunit of the 20S proteasome"
species:4932 "Saccharomyces cerevisiae" [GO:0010499 "proteasomal
ubiquitin-independent protein catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0004298 "threonine-type
endopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0004175 "endopeptidase
activity" evidence=IEA] [GO:0005839 "proteasome core complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019773 "proteasome core complex,
alpha-subunit complex" evidence=IEA;IDA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042175 "nuclear outer membrane-endoplasmic
reticulum membrane network" evidence=IDA] InterPro:IPR000426
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023332
Pfam:PF00227 Pfam:PF10584 PROSITE:PS00388 PROSITE:PS51475
SMART:SM00948 SGD:S000005398 GO:GO:0005739 GO:GO:0005634
EMBL:BK006948 GO:GO:0043161 GO:GO:0042175 GO:GO:0010499 PDB:1VSY
PDB:3L5Q PDBsum:1VSY PDBsum:3L5Q GO:GO:0004298 GO:GO:0034515
PDB:4G4S PDBsum:4G4S PDB:4B4T PDBsum:4B4T eggNOG:COG0638
GO:GO:0019773 HOGENOM:HOG000091085 PDB:1FNT PDB:1G0U PDB:1G65
PDB:1JD2 PDB:1RYP PDB:1Z7Q PDB:2F16 PDB:2FAK PDB:2GPL PDB:2ZCY
PDB:3BDM PDB:3D29 PDB:3DY3 PDB:3DY4 PDB:3E47 PDB:3GPJ PDB:3GPT
PDB:3GPW PDB:3HYE PDB:3MG0 PDB:3MG4 PDB:3MG6 PDB:3MG7 PDB:3MG8
PDB:3NZJ PDB:3NZW PDB:3NZX PDB:3OEU PDB:3OEV PDB:3OKJ PDB:3SDI
PDB:3SDK PDB:3SHJ PDB:3TDD PDB:3UN4 PDB:3UN8 PDB:4FZC PDB:4FZG
PDB:4GK7 PDBsum:1FNT PDBsum:1G0U PDBsum:1G65 PDBsum:1JD2
PDBsum:1RYP PDBsum:1Z7Q PDBsum:2F16 PDBsum:2FAK PDBsum:2GPL
PDBsum:2ZCY PDBsum:3BDM PDBsum:3D29 PDBsum:3DY3 PDBsum:3DY4
PDBsum:3E47 PDBsum:3GPJ PDBsum:3GPT PDBsum:3GPW PDBsum:3HYE
PDBsum:3MG0 PDBsum:3MG4 PDBsum:3MG6 PDBsum:3MG7 PDBsum:3MG8
PDBsum:3NZJ PDBsum:3NZW PDBsum:3NZX PDBsum:3OEU PDBsum:3OEV
PDBsum:3OKJ PDBsum:3SDI PDBsum:3SDK PDBsum:3SHJ PDBsum:3TDD
PDBsum:3UN4 PDBsum:3UN8 PDBsum:4FZC PDBsum:4FZG PDBsum:4GK7
MEROPS:T01.974 KO:K02731 OMA:NRAQVEC OrthoDB:EOG45B4QP EMBL:L34348
EMBL:Z74780 PIR:B55904 RefSeq:NP_014604.1 ProteinModelPortal:P40303
SMR:P40303 DIP:DIP-4844N IntAct:P40303 MINT:MINT-478854
STRING:P40303 PaxDb:P40303 PeptideAtlas:P40303 EnsemblFungi:YOL038W
GeneID:854119 KEGG:sce:YOL038W CYGD:YOL038w
GeneTree:ENSGT00550000074753 EvolutionaryTrace:P40303
NextBio:975822 Genevestigator:P40303 GermOnline:YOL038W
Uniprot:P40303
Length = 254
Score = 106 (42.4 bits), Expect = 0.00085, P = 0.00085
Identities = 31/116 (26%), Positives = 55/116 (47%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + GKNC + +RR ++LQ ++SKI + + SGL DS+ L ++
Sbjct: 30 GTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKA 89
Query: 68 VFRHKLYQLREERDMKPETFASLVSALL--YEKRFG--PYFCQPVIAGLSD-EDKP 118
+ ++L E + E V+ + Y + G P+ +IAG +D+P
Sbjct: 90 RVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEP 145
>POMBASE|SPBC577.10 [details] [associations]
symbol:SPBC577.10 "20S proteasome complex subunit beta 7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019774 "proteasome core complex, beta-subunit complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR016295 InterPro:IPR023333 Pfam:PF00227
PIRSF:PIRSF001213 PROSITE:PS00854 PROSITE:PS51476
PomBase:SPBC577.10 GO:GO:0005829 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GO:GO:0004298 eggNOG:COG0638
GO:GO:0019774 HOGENOM:HOG000181719 KO:K02736 OMA:RIMRVND
MEROPS:T01.A13 PIR:T40554 RefSeq:NP_595308.1
ProteinModelPortal:Q9USQ9 STRING:Q9USQ9 PRIDE:Q9USQ9
EnsemblFungi:SPBC577.10.1 GeneID:2540875 KEGG:spo:SPBC577.10
OrthoDB:EOG4V46HT NextBio:20801991 Uniprot:Q9USQ9
Length = 262
Score = 106 (42.4 bits), Expect = 0.00092, P = 0.00092
Identities = 42/178 (23%), Positives = 88/178 (49%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
GS+++A+ + IA+D D +R++K+ D +G G +D Q + QRL
Sbjct: 43 GSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQI-QRL 101
Query: 68 VFRHKLYQ--LREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDK-PFICT 122
+ + ++ + + ++P +S +LY +R PY+ Q ++AG+ E+K P++
Sbjct: 102 LEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAF 161
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVS-QALLSSVDRDCL 179
D G A A G +++ A + K D+ ++T+S ++ +++D +C+
Sbjct: 162 ADLRGTTYSAP----AIATGFAMHLALPMLRKAT--DDDRWKTLSKESARATID-ECM 212
>FB|FBgn0034842 [details] [associations]
symbol:Prosbeta5R1 "Proteasome beta5 subunit-related 1"
species:7227 "Drosophila melanogaster" [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0005839 "proteasome core complex"
evidence=ISS] [GO:0004298 "threonine-type endopeptidase activity"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] InterPro:IPR000243
InterPro:IPR001353 InterPro:IPR016050 InterPro:IPR023333
Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854 PROSITE:PS51476
GO:GO:0005634 GO:GO:0005737 GO:GO:0051603 GO:GO:0005839
GO:GO:0004298 eggNOG:COG0638 HSSP:P30656 EMBL:AY075254
ProteinModelPortal:Q8T8V8 SMR:Q8T8V8 IntAct:Q8T8V8 STRING:Q8T8V8
MEROPS:T01.A07 PRIDE:Q8T8V8 UCSC:CG9868-RA FlyBase:FBgn0034842
InParanoid:Q8T8V8 OrthoDB:EOG43XSK4 ArrayExpress:Q8T8V8 Bgee:Q8T8V8
Uniprot:Q8T8V8
Length = 315
Score = 106 (42.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 33/143 (23%), Positives = 69/143 (48%)
Query: 40 QRISKIHDRLFIGLSGLATDSQTLYQRLVFRH-KLYQLREERDMKPETFASLVSALLYEK 98
++I +++D + L+G A D + R++ + +L+QLR + M +T A ++ + E
Sbjct: 103 RKIVELNDYMLGTLAGGAADC-VYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEY 161
Query: 99 RFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDME 158
+ ++AG DE P + +DS G + + F V G+ G + ++ D+
Sbjct: 162 KGMGLVMGMMLAGFDDEG-PKLIYVDSEGMRSHGQVFSV-GSGSPYALGVLDTGYRYDLS 219
Query: 159 PDELFETVSQALLSSVDRDCLSG 181
E ++ +A+ + +D SG
Sbjct: 220 DQEAYDLARRAIYHATSKDAYSG 242
Score = 35 (17.4 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 175 DRDCLSGW 182
D+ C SGW
Sbjct: 291 DKPCSSGW 298
>ZFIN|ZDB-GENE-990415-215 [details] [associations]
symbol:psmb5 "proteasome (prosome, macropain)
subunit, beta type, 5" species:7955 "Danio rerio" [GO:0051603
"proteolysis involved in cellular protein catabolic process"
evidence=IEA] [GO:0004175 "endopeptidase activity" evidence=IEA]
[GO:0005839 "proteasome core complex" evidence=IEA] [GO:0004298
"threonine-type endopeptidase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR000243 InterPro:IPR001353 InterPro:IPR016050
InterPro:IPR023333 Pfam:PF00227 PRINTS:PR00141 PROSITE:PS00854
PROSITE:PS51476 ZFIN:ZDB-GENE-990415-215 GO:GO:0005634
GO:GO:0005737 GO:GO:0051603 GO:GO:0005839 GO:GO:0004298
HOVERGEN:HBG108297 HSSP:P30656 KO:K02737 MEROPS:T01.P01 CTD:5693
EMBL:BC071478 IPI:IPI00933640 RefSeq:NP_571226.1 UniGene:Dr.20627
ProteinModelPortal:Q6IQD0 SMR:Q6IQD0 STRING:Q6IQD0 PRIDE:Q6IQD0
GeneID:30387 KEGG:dre:30387 InParanoid:Q6IQD0 NextBio:20806800
ArrayExpress:Q6IQD0 Bgee:Q6IQD0 Uniprot:Q6IQD0
Length = 269
Score = 106 (42.4 bits), Expect = 0.00097, P = 0.00097
Identities = 42/193 (21%), Positives = 91/193 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A ++ +A D R + +++ +I+ L ++G A D + ++R
Sbjct: 64 HGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADC-SFWER 122
Query: 67 LVFRH-KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L+ R ++Y+LR + + + L++ ++Y+ + ++ G D+ P + +DS
Sbjct: 123 LLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGW-DKRGPGLYYVDS 181
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + F V G+ YG ++ + D+ DE + +A+ + RD SG +
Sbjct: 182 EGNRVCGGLFAV-GSGSMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVN 240
Query: 186 VYIVTPTEIKERI 198
+Y V +E ER+
Sbjct: 241 LYRVH-SEGWERV 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 204 204 0.00094 111 3 11 22 0.45 32
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 125
No. of states in DFA: 598 (64 KB)
Total size of DFA: 158 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.91u 0.10s 18.01t Elapsed: 00:00:00
Total cpu time: 17.93u 0.10s 18.03t Elapsed: 00:00:00
Start: Sat May 11 09:04:39 2013 End: Sat May 11 09:04:39 2013
WARNINGS ISSUED: 1