BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028737
(204 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|388521659|gb|AFK48891.1| unknown [Lotus japonicus]
Length = 204
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/204 (93%), Positives = 200/204 (98%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFA+ASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAVASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVS++LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSILYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVVAG+A ESLYGACEAMFKPDMEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVAGSASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|351723417|ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
gi|255627485|gb|ACU14087.1| unknown [Glycine max]
Length = 204
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/204 (92%), Positives = 201/204 (98%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRL+FRHKLYQLREERDMKP+TFASLVSA+LYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD+IGAKELAKDFVVAGTA ESLYGACE+MFKPDMEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|351721818|ref|NP_001237990.1| uncharacterized protein LOC100499664 [Glycine max]
gi|255625639|gb|ACU13164.1| unknown [Glycine max]
Length = 204
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/204 (93%), Positives = 199/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFI LSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD +GAKELAKDFVV+GTA ESLYGACEAMFKPDMEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|449464176|ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
Length = 204
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/204 (92%), Positives = 200/204 (98%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD+LF+GLSGL TD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDEDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAMFKPDMEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|388491594|gb|AFK33863.1| unknown [Medicago truncatula]
Length = 206
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/204 (92%), Positives = 199/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD+IGAKELAKDFVVAGTA ESLYGACE+MFKPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|357509159|ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
gi|355499883|gb|AES81086.1| Proteasome subunit beta type [Medicago truncatula]
Length = 204
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/204 (92%), Positives = 199/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD+IGAKELAKDFVVAGTA ESLYGACE+MFKPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|388491852|gb|AFK33992.1| unknown [Lotus japonicus]
Length = 204
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/204 (92%), Positives = 198/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQRI K+HD+LFI LSGLATD+
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVVAG+A ESLYGACEAMFKPDMEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVAGSASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|18395025|ref|NP_564149.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
gi|288558823|sp|Q9XI05.2|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
proteasome beta subunit C-1; AltName: Full=Proteasome
component T
gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
thaliana]
gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
Length = 204
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/204 (93%), Positives = 198/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAM+KPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVYIVTPTEIKERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204
>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
vinifera]
gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/204 (91%), Positives = 198/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSAL+AMVGKNCFAIASDRR GVQLQT+ATDFQ+I +IHDR+F+GLSGLATD+
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVVAGTA ESLYGACEAMFKPDMEP+ELFE +SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|388513745|gb|AFK44934.1| unknown [Medicago truncatula]
Length = 204
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/204 (92%), Positives = 199/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDM+PETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMRPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD+IGAKELAKDFVVAGTA ESLYGACE+MFKPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
subunit. EST gb|T76747 comes from this gene [Arabidopsis
thaliana]
gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/204 (92%), Positives = 197/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M I EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD
Sbjct: 1 MQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAM+KPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVYIVTPTEIKERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204
>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
Length = 204
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/204 (92%), Positives = 197/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYN SA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD
Sbjct: 1 MSIFEYNVSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAM+KPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVYIVTPTEIKERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204
>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
Length = 204
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/204 (92%), Positives = 198/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREE DMKPETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREECDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD+IGAKELAKDFVVAGTA ESLYGACE+MFKPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|18411547|ref|NP_565156.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|79321410|ref|NP_001031294.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|17380184|sp|O81153.1|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
proteasome beta subunit C-2
gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
Length = 204
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/204 (91%), Positives = 196/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAMFKPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTP E+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPKEVKERILKGRMD 204
>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/204 (90%), Positives = 196/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVV+GTA ESLYGACEAM+KPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTP E+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPNEVKERILKGRMD 204
>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 204
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/204 (90%), Positives = 196/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSAL+AMVGKNCFAIASDRRLGVQLQTIATDFQRI KIHDRLF+GLSGLATD+
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRLGVQLQTIATDFQRIYKIHDRLFLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDM PETFASLVSALLYEKRFGPYFCQPVIAGLSDE+KPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQPVIAGLSDENKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELA+DFVVAGTA ESLYGACE+MFKPD+E +EL E +SQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELARDFVVAGTASESLYGACESMFKPDLEAEELTEIISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+ ERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVTERILKGRMD 204
>gi|357475641|ref|XP_003608106.1| Proteasome subunit beta type [Medicago truncatula]
gi|355509161|gb|AES90303.1| Proteasome subunit beta type [Medicago truncatula]
gi|388497742|gb|AFK36937.1| unknown [Medicago truncatula]
Length = 204
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/204 (90%), Positives = 198/204 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+I ++NGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+L+IGLSGLATDS
Sbjct: 1 MTIFKHNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLYIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREE DMKPETFASLVSA+ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREELDMKPETFASLVSAMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD+IGAKELAKDFVVAGTA ESLYGACE+MFKPDME +ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204
>gi|356515898|ref|XP_003526634.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-3-A-like [Glycine max]
Length = 204
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/204 (88%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQ QT ATDFQRISKIHD+LFIGL GLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQPQTTATDFQRISKIHDKLFIGLXGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRL+F HKLYQLREERDMKP+TFASLVSA+LYE RFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLLFGHKLYQLREERDMKPQTFASLVSAILYENRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD+IGAKELAKDF VAGTA ESLYGACE+MFKPDMEP+ELFE +SQALLSSVDRDCLS
Sbjct: 121 CTMDAIGAKELAKDFAVAGTASESLYGACESMFKPDMEPEELFEMISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGH+Y+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHIYVVTPTEVKERILKGRMD 204
>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/204 (88%), Positives = 195/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGV LQT+ATDFQRI KIHD++F+GLSGL TD+
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKVFVGLSGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVVAG+A ESLYGACEA+FKPDMEP+ELFE VSQALL+SVDRDCLS
Sbjct: 121 CTMDFIGAKELAKDFVVAGSASESLYGACEALFKPDMEPEELFEVVSQALLASVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGH+YIVTP EI+E+ILKGRMD
Sbjct: 181 GWGGHIYIVTPDEIREKILKGRMD 204
>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/204 (88%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGV LQT+ATDFQRI KIHD+LF+GLSGL TD+
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKLFVGLSGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHK+YQLREERDMKPETFA+LVSA+LYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQPVIAGLDDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVVAG+A ESLYGACEA FKPDMEPDELFE VSQALL+SVDRDCLS
Sbjct: 121 CTMDFIGAKELAKDFVVAGSASESLYGACEAFFKPDMEPDELFEVVSQALLASVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGH+YIVTP +IKE+ILKGRMD
Sbjct: 181 GWGGHIYIVTPDDIKEKILKGRMD 204
>gi|17380183|sp|O65084.1|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
Length = 204
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/204 (87%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI KIHD+L++GLSGLATD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQR FRHKLYQLREER+M+PETFASLVSALLYEKRFGPYFCQPVIAGL ++DKPFI
Sbjct: 61 QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGAKELAKDFVVAGTA ESLYGACE+M+KPDMEP+ELFET+SQALLSS+DRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVAGTAAESLYGACESMYKPDMEPEELFETISQALLSSIDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+V+P ++ ER LKGRMD
Sbjct: 181 GWGGHVYVVSPNQVIERTLKGRMD 204
>gi|357138383|ref|XP_003570772.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/204 (86%), Positives = 197/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ K+H++L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKVHEKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP+IAGL D D+PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGDNDQPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KPDMEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPDMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V +VTPTE++ER+LKGRMD
Sbjct: 181 GWGGYVLVVTPTEVQERVLKGRMD 204
>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
Length = 204
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/204 (87%), Positives = 196/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D ++PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNNEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+MEP+ELFET+SQAL +SVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V IVTPTE++ER+LKGRMD
Sbjct: 181 GWGGYVLIVTPTEVQERVLKGRMD 204
>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/204 (86%), Positives = 196/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIH +L+IGLSGLA+D+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP+IAGL + D+PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGENDQPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KPDMEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPDMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V IVTPTE++ER+LKGRMD
Sbjct: 181 GWGGYVLIVTPTEVQERVLKGRMD 204
>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
Length = 204
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/204 (87%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D+D PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDVPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+MEPDELFET+SQAL SSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPDELFETISQALNSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V IVTPTE++E ++K RMD
Sbjct: 181 GWGGYVLIVTPTEVREHVIKSRMD 204
>gi|357123202|ref|XP_003563301.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/204 (84%), Positives = 197/204 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIH +L++GLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP+IAGL ++++PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGEDNEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+MEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V +VTPTE++ER+LKGRMD
Sbjct: 181 GWGGYVLVVTPTEVQERVLKGRMD 204
>gi|413943569|gb|AFW76218.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 204
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/204 (86%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D++ PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD +GAKELAKDFVV+GTA ESLYGACE+M+KPDM+PDELFET+SQAL SSVDRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACESMYKPDMQPDELFETISQALNSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V IVTPTE++E ++K RMD
Sbjct: 181 GWGGYVLIVTPTEVREHVIKSRMD 204
>gi|413954658|gb|AFW87307.1| proteasome subunit beta type [Zea mays]
Length = 204
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/204 (85%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ K+HD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D++ PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD +GAKELAKDFVV+GTA ESLYGACE+M+KP+MEPDELFETVSQAL SS+DRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACESMYKPNMEPDELFETVSQALNSSIDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V IVTPTE++E ++K RMD
Sbjct: 181 GWGGYVLIVTPTEVREHVIKSRMD 204
>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/204 (85%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKP+ FASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP MEP+ELFET+SQAL +SVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V +VTPTE++ER++KGRMD
Sbjct: 181 GWGGYVLLVTPTEVQERVIKGRMD 204
>gi|413935900|gb|AFW70451.1| proteasome subunit beta type [Zea mays]
Length = 305
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/204 (85%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF+R+ K+HD+L+IGLSGLATD+
Sbjct: 102 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 161
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQL EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 162 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 221
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+MEP+ELFET+SQAL +SVDRDCLS
Sbjct: 222 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRDCLS 281
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V +VT TE++ER+LKGRMD
Sbjct: 282 GWGGYVLVVTHTEVQERVLKGRMD 305
>gi|226505280|ref|NP_001141963.1| uncharacterized protein LOC100274112 [Zea mays]
gi|194706600|gb|ACF87384.1| unknown [Zea mays]
Length = 204
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/204 (85%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ K+HD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D++ PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD +GAKELAKDFVV+GTA ESLYGACE+M++P+MEPDELFETVSQAL SS+DRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACESMYRPNMEPDELFETVSQALNSSIDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V IVTPTE++E ++K RMD
Sbjct: 181 GWGGYVLIVTPTEVREHVIKSRMD 204
>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|17380214|sp|Q9LST7.1|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
Length = 204
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/204 (85%), Positives = 195/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKP+TFASLVSALLYEKRFGPYFCQPVIAGL ++++PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+MEP+ELFET+SQAL SSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V +VTPTE+KE ++KGRMD
Sbjct: 181 GWGGFVLLVTPTEVKECVIKGRMD 204
>gi|346469773|gb|AEO34731.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/204 (84%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGV LQTIATDF+RI +IHD+L++GLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVNLQTIATDFKRIFRIHDKLYVGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TLYQRLVFRHKLYQLREERDMKPETFAS+VSA+LYEKRFGPYFCQPVIAGL ++D PFI
Sbjct: 61 LTLYQRLVFRHKLYQLREERDMKPETFASVVSAILYEKRFGPYFCQPVIAGLGEDDVPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA E LYGACE+M+KP+MEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTANEPLYGACESMYKPNMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHV++VTPTE++ER LKGRMD
Sbjct: 181 GWGGHVFLVTPTEVQERTLKGRMD 204
>gi|226504734|ref|NP_001140276.1| uncharacterized protein LOC100272320 [Zea mays]
gi|194698808|gb|ACF83488.1| unknown [Zea mays]
Length = 204
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/204 (85%), Positives = 194/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF+R+ K+HD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQL EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 61 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+MEP+ELFET+SQAL +SVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V +VT TE++ER+LKGRMD
Sbjct: 181 GWGGYVLVVTHTEVQERVLKGRMD 204
>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/204 (84%), Positives = 195/204 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIH +L+IGLSGLA+D+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVS++LYEKRFGPYFCQP+IAGL +D+PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+MEP+ELFET+SQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V IVT TE++ER+LKGRMD
Sbjct: 181 GWGGYVLIVTATEVQERVLKGRMD 204
>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
Length = 213
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/204 (84%), Positives = 193/204 (94%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+ I EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 10 LQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 69
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKP+ FASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 70 QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 129
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP MEP+ELFET+SQAL +SVDRDCLS
Sbjct: 130 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDCLS 189
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG+V +VTPTE++ER++KGRMD
Sbjct: 190 GWGGYVLLVTPTEVQERVIKGRMD 213
>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
thaliana]
Length = 191
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/191 (91%), Positives = 184/191 (96%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD QTLYQRLVFRHKL
Sbjct: 1 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAK 133
YQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFICTMDSIGAKELAK
Sbjct: 61 YQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAK 120
Query: 134 DFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 193
DFVV+GTA ESLYGACEAMFKPDME +ELFET+SQALLSSVDRDCLSGWGGHVY+VTP E
Sbjct: 121 DFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKE 180
Query: 194 IKERILKGRMD 204
+KERILKGRMD
Sbjct: 181 VKERILKGRMD 191
>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
Length = 187
Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 172/187 (91%), Positives = 181/187 (96%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
NCFAIASDRRLGVQLQTIATDFQRI KIHD+L IGL+GLATDSQT+YQRLVFRHKLYQLR
Sbjct: 1 NCFAIASDRRLGVQLQTIATDFQRIYKIHDKLSIGLAGLATDSQTMYQRLVFRHKLYQLR 60
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVV 137
EERDMKP+TFASLVSALLYEKRFGPYFCQPVIAGL D+DKPFICTMDSIGAKELAKDFVV
Sbjct: 61 EERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFICTMDSIGAKELAKDFVV 120
Query: 138 AGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKER 197
AGTA ESLYGACEAMFKPDME +ELFET+SQALLSSVDRDCLSGWGGHVY+VTPTE+ ER
Sbjct: 121 AGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVTER 180
Query: 198 ILKGRMD 204
ILKGRMD
Sbjct: 181 ILKGRMD 187
>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 160/204 (78%), Positives = 185/204 (90%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSIT YNGSAL+AMVGKNCFAIASDRRLGV QTIA DFQRI KIHD+L+IGLSGLATD
Sbjct: 1 MSITSYNGSALIAMVGKNCFAIASDRRLGVNFQTIACDFQRIFKIHDKLYIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT++QRL FRHKLYQLREER+M+PETFASLVSA+LYEKRFGPYFC+P+IAGL+D+ PFI
Sbjct: 61 QTMHQRLQFRHKLYQLREERNMRPETFASLVSAILYEKRFGPYFCEPIIAGLNDDGTPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CT D IGAK+LAKDFVV+GTA ESLYGACE+M+KPD+ PDELFE +SQALL+SVDRDC+S
Sbjct: 121 CTTDLIGAKQLAKDFVVSGTASESLYGACESMYKPDLGPDELFEVISQALLASVDRDCIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V++VTP ++ + LKGRMD
Sbjct: 181 GWGGIVHVVTPDQVITKTLKGRMD 204
>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 159/204 (77%), Positives = 184/204 (90%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSIT YNGSAL+AMVGK+CFAIASDRRLGV QTIA DFQRI KIHD L+IGLSGLATD
Sbjct: 1 MSITSYNGSALIAMVGKDCFAIASDRRLGVNFQTIACDFQRIFKIHDHLYIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT++QRL FRHKLYQLREER+M+PETFASLVSA+LYEKRFGPYFC+P+IAGL+D+ PFI
Sbjct: 61 QTMHQRLNFRHKLYQLREERNMRPETFASLVSAMLYEKRFGPYFCEPIIAGLNDDGTPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CT D IGAK+LAKDFVV+GTA ESLYGACE+M+KPD+ PDELFE +SQALL+SVDRDC+S
Sbjct: 121 CTTDLIGAKQLAKDFVVSGTASESLYGACESMYKPDLGPDELFEVISQALLASVDRDCIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V++VTP ++ + LKGRMD
Sbjct: 181 GWGGIVHVVTPNQVITKTLKGRMD 204
>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
Length = 204
Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 156/204 (76%), Positives = 182/204 (89%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSALVAMVGK+CFAIASDRRLGV QTIATDFQRI KIHD+L++GL+GLA+D
Sbjct: 1 MSIFTYNGSALVAMVGKDCFAIASDRRLGVNFQTIATDFQRIFKIHDKLYVGLAGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRL +RH L+QL+EERDM+PETF++ VSA LYEKRFGPYF QP+IAGL ++KP+I
Sbjct: 61 QTLYQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQPLIAGLGADNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
CTMDSIGA E +KDFVV GTA ESLYGACE+M+KPDMEP++LFET+SQAL+SSVDRDCLS
Sbjct: 121 CTMDSIGAIEHSKDFVVGGTASESLYGACESMYKPDMEPEDLFETISQALISSVDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG VY+VTP ++ R LKGRMD
Sbjct: 181 GWGGIVYVVTPDQVIVRTLKGRMD 204
>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
Length = 178
Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 162/178 (91%), Positives = 170/178 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI +IHD++FIGLSGL TD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFRIHDKVFIGLSGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 LTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
CTMDSIGAKELAKDFVVAGTA ESLYGACEAMFKPDM P+ELFET+SQAL++SVDRDC
Sbjct: 121 CTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMGPEELFETISQALIASVDRDC 178
>gi|225459611|ref|XP_002285872.1| PREDICTED: proteasome subunit beta type-3-A isoform 2 [Vitis
vinifera]
Length = 174
Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 169/204 (82%), Gaps = 30/204 (14%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSAL+AMVGKNCFAIASDRR GVQLQT+ATDFQ+I +IHDR+F+GLSGLATD+
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR--------------------- 99
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
ELAKDFVVAGTA ESLYGACEAMFKPDMEP+ELFE +SQALLSSVDRDCLS
Sbjct: 100 ---------ELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCLS 150
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 151 GWGGHVYVVTPTEVKERILKGRMD 174
>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
Length = 204
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 167/204 (81%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAM GK C AI SD R GVQLQT+ATD++++ KIHD+LFIGL+GL TD+
Sbjct: 1 MSIFEYNGSAIVAMAGKECVAIGSDLRFGVQLQTLATDYKKVYKIHDQLFIGLAGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+TL QR F+H LY+LREERD+KP F LVSA LYE+RFGPYFCQPVIAGL + P++
Sbjct: 61 ETLSQRFAFKHNLYKLREERDIKPSAFGQLVSATLYERRFGPYFCQPVIAGLEPDGSPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MDSIGA+E AKDF+VAGTA +SL G CE++++PD+ P+ELFET+SQALLS DRDCL+
Sbjct: 121 CGMDSIGAQETAKDFMVAGTATDSLLGICESLWRPDLGPEELFETLSQALLSGQDRDCLA 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++T ++ R LKGRMD
Sbjct: 181 GWGAVVYVITKDKVIARTLKGRMD 204
>gi|384248553|gb|EIE22037.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 205
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 167/205 (81%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A+VAM GK C AI SD R GVQ QT+ATD++++ KIHD+LFIGL+GL TD+
Sbjct: 1 MSIFEYNGAAIVAMAGKECVAIGSDLRFGVQFQTLATDYKKVYKIHDKLFIGLAGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT++Q+L FRH LY+LREER++KP TF LVS++LYEKRFGPYF PVIAGL D+ + P+
Sbjct: 61 QTMHQKLKFRHNLYKLREERNIKPSTFGELVSSMLYEKRFGPYFVSPVIAGLEDKTNVPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD+IGA E A DF+VAGTA +SLYG CE+MF+PDMEP+ELFETV+Q L+S DRD L
Sbjct: 121 ICGMDTIGAIETANDFMVAGTAPDSLYGMCESMFRPDMEPEELFETVTQCLMSGADRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY++T + R LKGRMD
Sbjct: 181 SGWGAIVYVITKDAVVARTLKGRMD 205
>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
Length = 204
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/204 (63%), Positives = 163/204 (79%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C AIASD RLG+ QT+A DF+++ K++DRL +GL+GLATD
Sbjct: 1 MSILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR LY+LREER+M PE F +L+S +LYEKRFGPYFC+PVIAGL + KPF+
Sbjct: 61 QTLDQLLRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCEPVIAGLDPKGKPFL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
TMD IGA+ +AKDF VAGT ++YG CE ++KPDME +ELFET++QALL+SVDRD LS
Sbjct: 121 GTMDLIGAQAMAKDFCVAGTCDGNMYGMCETLWKPDMEKEELFETLAQALLASVDRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V+I+T I R LKGR D
Sbjct: 181 GWGGVVHIITKEGITSRELKGRQD 204
>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
Length = 204
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 158/204 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A+VAM GK C AI SD R GVQLQT+ D ++ KIHD+L++GLSGL TD+
Sbjct: 1 MSIFSYNGAAIVAMAGKECVAIGSDLRFGVQLQTMTCDTPKVYKIHDKLYLGLSGLQTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL+Q+L FRH LY+LREERDMKP TF ++S LYE+RFGPYF PV+AGL + P++
Sbjct: 61 TTLHQKLQFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD+IGA E AKDF++ GT+ ESLYG CE+M++PDMEPDELFETV+Q L+S DRD L+
Sbjct: 121 CGMDTIGAIESAKDFMITGTSPESLYGMCESMWRPDMEPDELFETVAQCLMSGCDRDALA 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+++T ++ R LK RMD
Sbjct: 181 GWGAVVHVITKDKVVSRTLKTRMD 204
>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
Length = 204
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 159/204 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM GK C AI SD R GVQ QTI+ D ++ KIHD+L++GLSGL TD+
Sbjct: 1 MSIFSYNGSAIVAMAGKECVAIGSDLRFGVQYQTISCDTPKVFKIHDKLYLGLSGLLTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL+Q+L+FRH LY+LREERDMKP TF ++S LYE+RFGPYF PV+AGL + P++
Sbjct: 61 QTLHQKLLFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD+IGA E AKDF++ GT+ ESLYG CE+M++PDMEP+ELFETV+Q L+S DRD L+
Sbjct: 121 SGMDTIGAIETAKDFMIGGTSPESLYGMCESMWRPDMEPEELFETVAQCLMSGFDRDALA 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG ++++T ++ R LK RMD
Sbjct: 181 GWGAVIHVITKDKVITRTLKTRMD 204
>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+ +VAM GKNC AIA+D R G++ QT+ TD Q+I KIHD+LFIGL+GLATD
Sbjct: 1 MSILEYNGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFIGLNGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPF 119
QT+ ++L FR +Y L+EERD+KP +FA+L+S +LYEKRFGP+F +PVIAGL E+KPF
Sbjct: 61 QTVNEKLKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC D IGA +FVV+GT E+LYG CE+++KPDMEP++LFE +SQ LL++VDRDC+
Sbjct: 121 ICAQDLIGAPCFTDNFVVSGTCSEALYGMCESLYKPDMEPEDLFEVISQCLLAAVDRDCI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++TP I + LK R D
Sbjct: 181 SGWGAVVHVITPDSITTKRLKVRQD 205
>gi|328770084|gb|EGF80126.1| hypothetical protein BATDEDRAFT_88542 [Batrachochytrium
dendrobatidis JAM81]
Length = 204
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 159/204 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA++AM GKNC AIA+DRR GVQ T+ TDFQ+I I D+ ++GL+GLATD
Sbjct: 1 MSIMEYNGSAIIAMAGKNCVAIAADRRFGVQALTLGTDFQKIFPITDKTYLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL R ++ +Y L EER++ P+TF+ +VS+ YEKRFGPYF +P++AGL ++ PFI
Sbjct: 61 TTLKDRFRYKVNMYHLEEEREISPKTFSHMVSSTQYEKRFGPYFVEPIVAGLEKDNTPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C+MD+IG AKDFVV GTA + + G CE++++PD+EP+ELFE +SQALL+++DRD +S
Sbjct: 121 CSMDTIGCINFAKDFVVCGTASDQMNGMCESLWEPDLEPEELFEVISQALLNAIDRDAIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V+I+TPT + R LKGRMD
Sbjct: 181 GWGGIVHIITPTSVITRTLKGRMD 204
>gi|156389516|ref|XP_001635037.1| predicted protein [Nematostella vectensis]
gi|156222126|gb|EDO42974.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 163/205 (79%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AMVGKNC AIA+DRRLG+Q QT++ DFQ+I ++ ++LF+GL GLATD
Sbjct: 1 MSIMEYNGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT+ RL FR LY+LRE R +KP+TF S+VS LLYE+RFGPYF +PVIAGL + ++PF
Sbjct: 61 QTISSRLKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I +MD IG KDFVV+GT E +YG CE+++ PD+EPD+LFET+SQALL++VDRD +
Sbjct: 121 ISSMDLIGCPMETKDFVVSGTCSEQMYGMCESLWVPDLEPDDLFETISQALLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++ P ++ R LK RMD
Sbjct: 181 SGWGAVVHVIEPDKVTTRTLKARMD 205
>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 204
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 160/204 (78%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C IASD R+G+ QT++ DF++I +++++LF+GL+GLA+D
Sbjct: 1 MSILEYNGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQMNEKLFVGLAGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR LY+LREER+M P+ F +L+S +LYEKRFGPYF +PV+AGL + DKP++
Sbjct: 61 QTLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLDENDKPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
TMD IGA +DFVVAGT +LYG CE ++K DME +ELFET++QALL+SVDRD LS
Sbjct: 121 ATMDLIGATSSTEDFVVAGTCAGNLYGMCETLYKKDMEQEELFETLAQALLASVDRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V+I+T I R LKGR D
Sbjct: 181 GWGGVVHIITKEGIISRELKGRQD 204
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 158/204 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNGSA+VAMVGK+C AIASD R G+Q QTIA D +++ ++ D+LFIGLSGL TD
Sbjct: 1 MSILQYNGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFIGLSGLLTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q+ F+ K+Y LRE R M+P+ F+SLVS+ LYEKRFGPYF +PV+AGL ++ PFI
Sbjct: 61 QTLKQKFDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEGPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD IGA AKDFVV+GT + LYG CEA +KP+M PDELFET+SQ+LL++VDRDCL+
Sbjct: 121 AAMDLIGAPVFAKDFVVSGTTSDELYGVCEAFWKPNMGPDELFETISQSLLAAVDRDCLA 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+++T + + LK R D
Sbjct: 181 GWGAIVHVITKDGVTTKQLKSRKD 204
>gi|326426453|gb|EGD72023.1| proteasome subunit beta type-3 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 158/204 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAM GK C AIA+DRRLG Q QT++TDFQ++ ++ +LF+GL GL TD+
Sbjct: 1 MSIMEYNGSAVVAMTGKECVAIAADRRLGAQAQTVSTDFQKVFQMGPKLFVGLPGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T+ QRL FR +Y LREERD++P+T +LVS+ LYE+RFGPYF +PV+AGL +++P++
Sbjct: 61 ITVSQRLKFRLNMYTLREERDIEPKTMINLVSSFLYERRFGPYFVEPVVAGLDSKNQPYV 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
+ D IG DFVV GT+ E LYG CE+++KPDM PD+LFET+SQAL+++VDRDCL+
Sbjct: 121 ASTDLIGCPMETSDFVVGGTSSEQLYGMCESLYKPDMAPDDLFETISQALMNAVDRDCLA 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+I+ +I R LK RMD
Sbjct: 181 GWGAIVHIIEKDKITTRELKARMD 204
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 159/204 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG ++VAMVGK+C AIA+D+RLG Q T++T+FQ+I K ++ IGL GLATD
Sbjct: 1 MSIMQYNGGSVVAMVGKDCVAIAADKRLGAQFMTVSTEFQKIFKATEKTLIGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL R F+ +Y++REER+++P+ A +VS+ LYE+RFGPYF +PVIAGL +KPFI
Sbjct: 61 ITLADRFRFKTNMYKMREEREIEPKALAHMVSSTLYERRFGPYFVEPVIAGLDKHNKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C+MD IG AKDFVV+GTAG +LYG CE++++PD+EP++LFET+SQALL++ DRD LS
Sbjct: 121 CSMDLIGCINFAKDFVVSGTAGPNLYGMCESLWEPDLEPEDLFETISQALLNAQDRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VYI+T TE+ R LK R D
Sbjct: 181 GWGAVVYIITSTEVTVRSLKSRQD 204
>gi|167522269|ref|XP_001745472.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775821|gb|EDQ89443.1| predicted protein [Monosiga brevicollis MX1]
Length = 211
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 157/203 (77%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI EYNGSA+VAM GK C AIA+DRRLG Q QT+ATDFQ++ ++ LF+GL GLATD Q
Sbjct: 9 SIMEYNGSAMVAMTGKGCIAIAADRRLGAQAQTVATDFQKLFQMGPTLFVGLPGLATDVQ 68
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T QRL F+ KLY+LREERD++P+ +L+S++LYEKRFGPYF +P+IAGL + +P++
Sbjct: 69 TFSQRLTFKLKLYKLREERDIEPKALTNLISSMLYEKRFGPYFIEPLIAGLDKDGQPYVA 128
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+ D IG DFVV GT+ + L+G CE+++KP+MEPDELFE VSQALL++ DRD L+G
Sbjct: 129 STDVIGCPMETTDFVVGGTSSDQLFGMCESLYKPNMEPDELFEVVSQALLNAQDRDALAG 188
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WGG V+IV ++ R L+GRMD
Sbjct: 189 WGGVVHIVEKDKVTTRTLRGRMD 211
>gi|255083731|ref|XP_002508440.1| predicted protein [Micromonas sp. RCC299]
gi|226523717|gb|ACO69698.1| predicted protein [Micromonas sp. RCC299]
Length = 207
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 156/207 (75%), Gaps = 3/207 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATD 59
MSI YNG+A++AM GK C AIASD R G+ Q QT A D ++I KIHD L++GLSGLATD
Sbjct: 1 MSIMSYNGAAIIAMCGKECVAIASDLRFGINQQQTTAVDMKKIYKIHDHLYVGLSGLATD 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED--K 117
TL QR FRH +Y+LRE R M+PETFA+LVS +LYEKRFGPY+ +P++AGL + K
Sbjct: 61 QATLAQRFKFRHNMYELRESRKMRPETFANLVSTMLYEKRFGPYYAEPIVAGLDATNGYK 120
Query: 118 PFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
PFI MD IGA +FVV G ESL+G CE+M+KPD+EP+ELFE ++Q +L+ V+RD
Sbjct: 121 PFITGMDLIGAMAPTDNFVVCGNNEESLFGVCESMYKPDLEPEELFEVIAQCILAGVNRD 180
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
CLSGWGG V++++ ++ R LKGRMD
Sbjct: 181 CLSGWGGVVHVISKDKVITRTLKGRMD 207
>gi|298711226|emb|CBJ32446.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 204
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 157/204 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GKNC I SD RLG Q QT+ATDF++I K+ D+L +GL GLATD
Sbjct: 1 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T+ + L FR LY+LREER++KPETF++L+S +LY+KRFGPYF +P++AGL +++ PFI
Sbjct: 61 ITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGA + DFVV GT +LYG CE+ ++PDM+ DELFET++Q LL+SVDRD LS
Sbjct: 121 SAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDMDKDELFETMAQCLLTSVDRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V+I+TP I + LKGR D
Sbjct: 181 GWGGVVHIITPEGIMSKTLKGRQD 204
>gi|325179973|emb|CCA14375.1| proteasome subunit beta type3 putative [Albugo laibachii Nc14]
Length = 204
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 161/204 (78%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA++AM GK+C IA D RLG+Q QTI+T+FQ++ ++ D++F+GL+GLATD
Sbjct: 1 MSILSYNGSAIIAMAGKDCVGIACDTRLGLQAQTISTNFQKVFRVSDKIFLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT+ Q L F+ +Y++ EERD+KPET +S +SA++Y+KRFGP+F +PVIAGL+ +++PF+
Sbjct: 61 QTVSQLLKFKVNMYKMNEERDLKPETLSSYLSAMMYKKRFGPWFIEPVIAGLTADNQPFL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
+MD +G + KDFVVAGT E+LYG CE+M++PDME ++LFET+SQ LLS+ +RD LS
Sbjct: 121 SSMDCLGCEMKTKDFVVAGTMEEALYGMCESMYRPDMESEDLFETLSQCLLSACNRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+I+TP I R LK R D
Sbjct: 181 GWGAVVHIITPKGIMSRTLKSRQD 204
>gi|428162279|gb|EKX31444.1| proteasome subunit beta type 3 [Guillardia theta CCMP2712]
Length = 208
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSITEYNG ++ M GKNC AIA D+R G Q QT+ATD ++ K+HD+LFIGL+GLATD
Sbjct: 1 MSITEYNGGCVIGMAGKNCVAIACDKRYGAQYQTLATDKTKVYKMHDQLFIGLAGLATDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT Y+RL FR +Y LREER +KP +F +VS LLYEKRFGPYF +PVIAGL E+KP++
Sbjct: 61 QTFYERLKFRLAMYSLREERLIKPASFGKMVSTLLYEKRFGPYFIEPVIAGLDKENKPYL 120
Query: 121 CTMDSIGAKEL----AKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
+ D IGA L FVVAGT E L G CE+M++ D+EP+ELFETVSQ LL+ DR
Sbjct: 121 FSSDFIGAPLLPDMDTNGFVVAGTCTEQLMGMCESMWRKDLEPEELFETVSQCLLAGQDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
DCLSGWG V+I+ P + R L+GRMD
Sbjct: 181 DCLSGWGAVVHIICPDRVITRTLRGRMD 208
>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380272|sp|Q9Y7T8.1|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe]
Length = 204
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 161/204 (78%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG + VAM GKNC AIASD RLGVQ ++ +F ++ + D+ ++GL+GLATD
Sbjct: 1 MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLY+ ++ LY+ REER ++P+TFA+LVS+ LYEKRFGPYF PV+AG+S+++ PFI
Sbjct: 61 QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C DSIG + A+DF+V+GTA E LYG CE++++P++EPD+LFET+SQALL++ DRDC+S
Sbjct: 121 CGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++T + +R++KGR D
Sbjct: 181 GWGCVVYVITADKCIKRLVKGRQD 204
>gi|291225400|ref|XP_002732675.1| PREDICTED: proteasome beta 3 subunit-like [Saccoglossus
kowalevskii]
Length = 205
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM GK+C AIA+DRR G+Q QT++ DFQ+I ++ RL++GL GLATD
Sbjct: 1 MSIMSYNGSAVVAMKGKDCVAIAADRRFGIQAQTVSMDFQKIFEMGPRLYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT+ RL FR LY LRE R +KP+TF S+VS LLYE+RFGPYF +P+IAGL D +PF
Sbjct: 61 QTVSNRLKFRLNLYTLRENRKIKPKTFMSMVSNLLYERRFGPYFVEPIIAGLEPDTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVVAGT+ E LYG CE+++ PDM +ELFETVSQALL++VDRD L
Sbjct: 121 ICSLDLIGCPMVPEDFVVAGTSSEQLYGMCESLWLPDMNSEELFETVSQALLNAVDRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+GWG V+I+ +I R LK RMD
Sbjct: 181 AGWGAVVHIIEKDKITTRTLKARMD 205
>gi|260809319|ref|XP_002599453.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
gi|229284732|gb|EEN55465.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
Length = 205
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A++AMVGK+C AIA+DRR GVQ QT++ DFQ+I ++ DRLF+GL GLATD
Sbjct: 1 MSIMSYNGAAIIAMVGKDCVAIAADRRFGVQAQTVSMDFQKIFQMGDRLFLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ R+ FR LY+LRE R +KP+TF S+VS LLYE+RFGPYF +PV+AGL + +PF
Sbjct: 61 QTVSNRMKFRLNLYELREARQVKPKTFLSMVSNLLYERRFGPYFVEPVVAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I + D IG + +DFVV+GT E +YG CE++++P++EPD+LFET+SQALL++ DRD +
Sbjct: 121 IASCDLIGCPMIPEDFVVSGTCSEQMYGMCESLWEPNLEPDDLFETISQALLNAADRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++ ++ R LKGRMD
Sbjct: 181 SGWGAVVHVIEKDKVTTRTLKGRMD 205
>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
gi|74858609|sp|Q55D66.1|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
Length = 205
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 152/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A + MVGKNC AIASD R G+Q QTI+ DF ++ +I+D+ F+G+SGL TD+
Sbjct: 1 MSIMAYNGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
QTLYQ+LVFRH LY+LREERDM P ++L++ +LYEKRFGPYF +P+I GL D PF
Sbjct: 61 QTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEGPDNTPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I MD IGA DF+V GT ++YG CE ++K DM D+LFET+SQ +L+S+DRD L
Sbjct: 121 ISGMDLIGASVATDDFLVVGTMTPAMYGVCETLYKKDMNEDDLFETISQCMLASLDRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++TPT++ + L GR D
Sbjct: 181 SGWGAIVHVITPTQVITKKLLGRQD 205
>gi|307175918|gb|EFN65731.1| Proteasome subunit beta type-3 [Camponotus floridanus]
Length = 286
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 156/204 (76%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ LFI L GLATD+Q
Sbjct: 83 SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIFEMEPHLFISLPGLATDTQ 142
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ +RL FR LY+L+E R + P+TF ++VS LLYEKRFGPYF +P+IAGL +PFI
Sbjct: 143 TVMERLRFRLNLYELKENRKIHPKTFTAMVSNLLYEKRFGPYFVEPIIAGLDPVTFEPFI 202
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD IG++ +A+DFVV GT E LYG CE++++PD+EP+ELFET+SQAL+++ DRD +S
Sbjct: 203 CNMDLIGSRNMAEDFVVGGTCTEQLYGMCESLYEPDLEPNELFETISQALVNAFDRDAIS 262
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VYI+ ++ +R +K RMD
Sbjct: 263 GWGAVVYIIEKDKVTKRTIKTRMD 286
>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
Length = 204
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 161/204 (78%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A++AM GK+C IA D RLG+Q QT+A DFQ++ ++ D+ F+GL+GLATD
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q++ Q L F+ +Y++ EERD+KP+T ++L+S ++YEKRFGP+F +PVIAGL++++KPF+
Sbjct: 61 QSVSQLLKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGLTEDNKPFL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
+MD +G + + KDFVVAGT E+LYG CE+M+KPDME ++LFET+SQ LLS+ +RD LS
Sbjct: 121 SSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCLLSACNRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+I+TP I + L+ R D
Sbjct: 181 GWGAVVHIITPKGITSKKLQSRQD 204
>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
Length = 205
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+YQRL+FR LY++RE R M PE FA+++S LYEKRFGPYF +PVIAGL + +PF
Sbjct: 61 LTVYQRLIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG L DFVVAGT E LYG CE ++KP++EPD LFE +SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCPNLPNDFVVAGTCAEQLYGMCETLWKPELEPDNLFEVISQALVNAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ I + LK RMD
Sbjct: 181 SGWGATVYIIEKERITVKKLKTRMD 205
>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
Length = 204
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 162/204 (79%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A++AM GK+C IA D RLG+Q QT+A DFQ++ ++ D+ F+GL+GLATD
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q++ Q L F+ +Y++ EER++KP+T ++L+S+++YEKRFGP+F +PVIAGL++++KPF+
Sbjct: 61 QSVSQLLKFKLNMYKMNEEREIKPKTLSALLSSMMYEKRFGPWFVEPVIAGLTEDNKPFL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
+MD +G + + KDFVVAGT E+LYG CE+M+KPDME ++LFET+SQ LLS+ +RD LS
Sbjct: 121 SSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCLLSACNRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+I+TP I + L+ R D
Sbjct: 181 GWGAVVHIITPKGITSKKLQSRQD 204
>gi|196002749|ref|XP_002111242.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
gi|190587193|gb|EDV27246.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
Length = 191
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 149/191 (78%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA+DRR G+Q QTI +FQRI + D L+IG SGLATD T+ +L FR +
Sbjct: 1 MTGKNCVAIAADRRFGIQAQTIGHEFQRIYGMSDHLYIGFSGLATDVTTVSNKLKFRLNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAK 133
Y LRE R+MKPETF SLVS+LLYEKRFGPYF +PVIAGL KPF+ ++D IG + +
Sbjct: 61 YMLRENREMKPETFMSLVSSLLYEKRFGPYFVEPVIAGLDKNAKPFVGSLDLIGCPMITE 120
Query: 134 DFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 193
DFVV+GTA E LYG CE++++PD+E D+LFE++SQALL++VDRDC+SGWGG VY++ +
Sbjct: 121 DFVVSGTASEQLYGMCESLWEPDLEADDLFESISQALLNAVDRDCVSGWGGIVYVIEKDK 180
Query: 194 IKERILKGRMD 204
+ E+ILK RMD
Sbjct: 181 VTEKILKARMD 191
>gi|326934090|ref|XP_003213128.1| PREDICTED: proteasome subunit beta type-3-like [Meleagris
gallopavo]
Length = 205
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q I TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMITTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEPD LFET+SQA+L++VDRD L
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVVVHIIEKDKITTRTLKARMD 205
>gi|328864212|gb|AEB53189.1| proteasome subunit beta type 3 [Holothuria glaberrima]
Length = 202
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 156/200 (78%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNGSA+VAM GK+C AIASDRR G+Q QT++ + Q+I ++ RL+IGLSGLATD QT+
Sbjct: 3 YNGSAIVAMRGKDCVAIASDRRFGIQAQTVSMECQKIFEMAPRLYIGLSGLATDVQTVSN 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY LRE RD+KP+TF S+V+ LLYE+RFGPYF +PVIAGL + +PFIC +D
Sbjct: 63 RLKFRLNLYTLRENRDIKPKTFMSMVANLLYERRFGPYFTEPVIAGLDPKTFEPFICNLD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + +DFVVAGT E LYG CE+++KPD+EPD+LFET+SQALL++VDRD +SGWG
Sbjct: 123 LIGCPMITEDFVVAGTCTEQLYGMCESLWKPDLEPDDLFETISQALLNAVDRDAVSGWGV 182
Query: 185 HVYIVTPTEIKERILKGRMD 204
V+++ +I R +K RMD
Sbjct: 183 IVHVIEKDKITTRTVKARMD 202
>gi|118102948|ref|XP_418119.2| PREDICTED: proteasome subunit beta type-3 [Gallus gallus]
Length = 205
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEPD LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVVVHIIEKDKITTRTLKARMD 205
>gi|157112534|ref|XP_001651824.1| proteasome subunit beta type [Aedes aegypti]
gi|108878045|gb|EAT42270.1| AAEL006174-PA [Aedes aegypti]
Length = 205
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T++QRL+FR LY++RE R+M PE FA+++S LYEKRFGPYF +PVIAGL+ + +PF
Sbjct: 61 LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + DFVVAGT E LYG CE ++KPD+EP++LFE +SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCPNMPNDFVVAGTCAEQLYGMCETLWKPDLEPEKLFEVISQALVNAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYIV ++ + LK RMD
Sbjct: 181 SGWGATVYIVEKEKLTVKKLKTRMD 205
>gi|393233198|gb|EJD40772.1| 20S proteasome subunit beta 3 [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 155/207 (74%), Gaps = 3/207 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGKNC AIASD RLG Q T+AT+F+++ + DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKNCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE---DK 117
TL +R +R +Y ++EER+++PETFA LVS+ LYE+RFGPYF +PVIAGL+ K
Sbjct: 61 ATLRERFRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLTSPARGSK 120
Query: 118 PFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
PFI D IG AKDFVV GTA L+G E +++PD+EP+ELFET+SQ LL++VDRD
Sbjct: 121 PFIAATDLIGCLNFAKDFVVCGTASSKLFGVAEGLWEPDLEPEELFETISQTLLNAVDRD 180
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++TP ++ R LKGRMD
Sbjct: 181 AFSGWGAIVHVITPEKVVTRTLKGRMD 207
>gi|94468582|gb|ABF18140.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Aedes
aegypti]
Length = 205
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T++QRL+FR LY++RE R+M PE FA+++S LYEKRFGPYF +PVIAGL+ + +PF
Sbjct: 61 LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + DFVVAGT E LYG CE ++KPD+EP++LFE +SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCPNMPNDFVVAGTCAEQLYGMCETLWKPDLEPEKLFEVISQALVNAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYIV ++ + LK RMD
Sbjct: 181 SGWGATVYIVEKDKLTVKKLKTRMD 205
>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|347966404|ref|XP_003435908.1| AGAP001697-PB [Anopheles gambiae str. PEST]
gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|333470074|gb|EGK97505.1| AGAP001697-PB [Anopheles gambiae str. PEST]
Length = 205
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+YQRL+FR LY++RE R M PE FA+++S LYEKRFGPYF +PVIAGL + +PF
Sbjct: 61 LTVYQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG L DFVVAGT E LYG CE ++KPD+E D LFE +SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCPNLPNDFVVAGTCAEQLYGMCETLWKPDLESDSLFEVISQALVNAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I + LK RMD
Sbjct: 181 SGWGATVYIIEKEKITVKKLKTRMD 205
>gi|340724396|ref|XP_003400568.1| PREDICTED: proteasome subunit beta type-3-like [Bombus terrestris]
Length = 205
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+TFAS+VS LLYE+RFGPYF +PVIAGLS +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC +D IG + DFVV GT E LYG CE++F+PDMEPD+LFET+SQAL+++ DRD +
Sbjct: 121 ICNVDLIGCISPSNDFVVGGTCSEQLYGMCESLFEPDMEPDDLFETISQALVNACDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ ++ R +K RMD
Sbjct: 181 SGWGAIVYIIEKDKVTTRTIKTRMD 205
>gi|219126883|ref|XP_002183677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404914|gb|EEC44859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 204
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 161/204 (78%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C IA+DRRLGVQLQT+ATDF ++ + + ++GL+GLATD
Sbjct: 1 MSILEYNGAAMIAMAGKDCVGIAADRRLGVQLQTVATDFNKVFAMGPKSYVGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL L FR LY+L+EER+M P T + L+S LLYEKRFGPYF +P++AGL++++KPF+
Sbjct: 61 QTLKNILEFRKNLYELKEEREMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLNEKNKPFL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD IGA A DFVV+GT +LYG CE++++PD+EP+ELFET++QALLSSVDRD +S
Sbjct: 121 SAMDLIGAPVQADDFVVSGTCTGNLYGMCESLYRPDLEPEELFETIAQALLSSVDRDAIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG V+I+T + + LKGR D
Sbjct: 181 GWGGVVHIITKDGVTTKELKGRQD 204
>gi|322800746|gb|EFZ21650.1| hypothetical protein SINV_15015 [Solenopsis invicta]
Length = 218
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 14 MSILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGPHLYVSLPGLATDT 73
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ +RL FR LY+L+E R + P+TF +++S LLYEKRFGPYF +P++AGL +PF
Sbjct: 74 QTVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYEKRFGPYFVEPIVAGLDPVTFEPF 133
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG++ +A+DFVV GT E LYG CE++++P++EP ELFETVSQAL+++ DRD +
Sbjct: 134 ICNMDLIGSRNMAEDFVVGGTCTEQLYGMCESLYEPNLEPTELFETVSQALVNAFDRDAI 193
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ ++ +R +K RMD
Sbjct: 194 SGWGAVVYIIEKDKVTKRTIKTRMD 218
>gi|225706352|gb|ACO09022.1| Proteasome subunit beta type 3 [Osmerus mordax]
Length = 205
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C A+A+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKQCVAVAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYEKRFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYEKRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEPD+LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|380022329|ref|XP_003695002.1| PREDICTED: proteasome subunit beta type-3-like [Apis florea]
Length = 205
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+ FAS+VS LLYE+RFGPYF +P+IAGL+ +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + DFVV GT E LYG CE++++PDMEPD+LFET+SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCISPSNDFVVGGTCSEQLYGMCESLYEPDMEPDDLFETISQALVNACDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I + LK RMD
Sbjct: 181 SGWGAIVYIIEKDKITVKTLKTRMD 205
>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
Length = 205
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 154/198 (77%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q +A +F++I I+D++ +GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCVAIACDLRLGSQSLGLANNFEKIFTINDKVMLGLTGLATDVTTLNEV 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
F++ LY+LREER ++P+TFA+LVS+ LYEKRFGPYFC PV+AGL+ E+KPFIC D I
Sbjct: 68 FRFKNNLYELREERKIEPQTFANLVSSTLYEKRFGPYFCGPVVAGLNKENKPFICGFDLI 127
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + AKDF+V+GTA E LYG CE++++P++E D+LFET+SQALL++ DRD +SGWG V
Sbjct: 128 GCIDFAKDFIVSGTASEQLYGMCESLYEPNLEADDLFETISQALLNAADRDTMSGWGAVV 187
Query: 187 YIVTPTEIKERILKGRMD 204
Y+VT + +R+LK R D
Sbjct: 188 YVVTKDSVTKRVLKTRQD 205
>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
Length = 201
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 148/199 (74%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++ M GKNC AIA+D R G+Q QT++ + ++ +I+D+ FIG+SGL TD+QTLYQ
Sbjct: 3 YNGGAVIVMTGKNCVAIATDLRFGIQHQTVSNNHPKVYRINDKCFIGISGLVTDAQTLYQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+LVFRH LY+LREERDM P+ ++LV +LYEKRFGPYF +PVI GL +DKPFI MD
Sbjct: 63 KLVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTEPVICGLDTQDKPFISGMDL 122
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IGA +DF++ GT ++YG CE ++K DM DELFETVSQ +LSS++RD +SGWG
Sbjct: 123 IGASVYTEDFLLVGTMTPAMYGLCETLYKKDMNEDELFETVSQCMLSSIERDAMSGWGAE 182
Query: 186 VYIVTPTEIKERILKGRMD 204
V I+TP + ++ L R D
Sbjct: 183 VTIITPAKTYKKKLLARQD 201
>gi|443717932|gb|ELU08769.1| hypothetical protein CAPTEDRAFT_228896 [Capitella teleta]
Length = 205
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 152/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM GK+C AIA+DRR G+Q QT+A DFQ+I + L++GL GLATD
Sbjct: 1 MSILSYNGSAIVAMAGKDCVAIAADRRFGIQGQTVALDFQKIYEYGPNLYMGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT+ QRL FR +Y+LRE R MKP+T S+VS LLYE+RFGPYF +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRVNMYELRENRKMKPQTMLSVVSNLLYERRFGPYFVEPVIAGLDPKTSKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I ++D IG + +DFV+ GT E LYG CEA+++PDM PD LFE VSQA++SS DRD +
Sbjct: 121 IASLDLIGCPMITEDFVINGTCAEQLYGMCEALWEPDMSPDVLFEKVSQAMMSSCDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+I+ ++ R LK RMD
Sbjct: 181 SGWGVVVHIIEKDKVTTRTLKARMD 205
>gi|350397681|ref|XP_003484954.1| PREDICTED: proteasome subunit beta type-3-like [Bombus impatiens]
Length = 205
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+TFAS+VS LLYE+RFGPYF +PVIAGLS +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C +D IG + DFVV GT E LYG CE++++PDMEPD+LFET+SQAL+++ DRD +
Sbjct: 121 VCNVDLIGCISPSDDFVVGGTCSEQLYGMCESLYEPDMEPDDLFETISQALVNACDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ ++ R +K RMD
Sbjct: 181 SGWGAIVYIIEKDKVTTRTIKTRMD 205
>gi|114052162|ref|NP_001040460.1| proteasome beta 3 subunit [Bombyx mori]
gi|95102980|gb|ABF51431.1| proteasome beta 3 subunit [Bombyx mori]
Length = 205
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+VAM G++C AIA+D+R G+Q QT++T+F ++ ++ L++GL GLATD+
Sbjct: 1 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT++QRL FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL D +P+
Sbjct: 61 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IG +DFVV+GT E LYG CEA+++P+++PDELFET+SQAL+++ DRD +
Sbjct: 121 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I E+ +K RMD
Sbjct: 181 SGWGAVVYIIEKDKITEKHVKTRMD 205
>gi|387017850|gb|AFJ51043.1| Proteasome subunit beta type-3-like [Crotalus adamanteus]
Length = 205
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q +ATDFQ+I + DRLFIGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVATDFQKIFPMGDRLFIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+T S+VS LLYE+RFGPY+ +PVIAGL+ +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLNPVTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++PDMEPD LFET+ Q++L++VDRD +
Sbjct: 121 ICSLDLIGCPMITDDFVVSGTCTEQMYGMCESLWEPDMEPDHLFETIGQSMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|328785087|ref|XP_624958.3| PREDICTED: proteasome subunit beta type-3-like [Apis mellifera]
Length = 205
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+ FAS+VS LLYE+RFGPYF +P+IAGL+ +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + DFVV GT E LYG CE++++PDMEPD+LFET+SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCISPSNDFVVGGTCTEQLYGMCESLYEPDMEPDDLFETISQALVNACDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I + LK RMD
Sbjct: 181 SGWGAIVYIIEKDKITVKTLKTRMD 205
>gi|390346277|ref|XP_780413.3| PREDICTED: proteasome subunit beta type-3-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 152/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM+GK+C IASDRR GVQ QT++ + Q+I + RL++GLSGLATD
Sbjct: 1 MSIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL FR LY LRE RD+KPETF S+VS LLYE+RFGPYF +PVIAGL + KPF
Sbjct: 61 TTVSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYERRFGPYFIEPVIAGLDPKTYKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC +D IG DFVVAGT E LYG CE+++ PD+ PD+LFET+SQ LL++VDRD L
Sbjct: 121 ICNLDLIGCPMFTDDFVVAGTCTEQLYGMCESVWVPDLAPDDLFETLSQGLLNAVDRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+GWG V+I+ ++ R +K RMD
Sbjct: 181 AGWGVVVHIIEKDKVTTREVKARMD 205
>gi|344285957|ref|XP_003414726.1| PREDICTED: proteasome subunit beta type-3-like [Loxodonta africana]
Length = 205
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIASDRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++PDM+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPDMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|321456221|gb|EFX67334.1| hypothetical protein DAPPUDRAFT_231791 [Daphnia pulex]
Length = 205
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK C AIASDRR GVQ T+A DFQRI ++ L+IGL GLATD+
Sbjct: 1 MSILSYNGGCVLAMKGKGCVAIASDRRFGVQTSTLAMDFQRIFEMGPHLYIGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+++RL FR LY+LRE R +KP+TF+++VS LLYE+RFGPYF +PVIAGL +PF
Sbjct: 61 LTVHERLRFRLNLYELRESRKIKPQTFSAMVSNLLYERRFGPYFVEPVIAGLDPVTWEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I MD IG + +DFVVAGT E L+G CEA+++P++EPD+LFET+SQAL+++ DRD +
Sbjct: 121 ISAMDLIGCPNMPEDFVVAGTCAEQLFGMCEALWEPNLEPDDLFETISQALMNAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWGG V+I+ ++ R+LK RMD
Sbjct: 181 SGWGGVVHIIEKDKVTTRMLKTRMD 205
>gi|395532536|ref|XP_003768326.1| PREDICTED: proteasome subunit beta type-3 [Sarcophilus harrisii]
Length = 205
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPNTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++PDMEP+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|410917408|ref|XP_003972178.1| PREDICTED: proteasome subunit beta type-3-like [Takifugu rubripes]
Length = 205
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG +DFVV+GT E +YG CE+++ PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWGPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 205
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|22538465|ref|NP_002786.2| proteasome subunit beta type-3 [Homo sapiens]
gi|397477037|ref|XP_003809892.1| PREDICTED: proteasome subunit beta type-3 [Pan paniscus]
gi|20532411|sp|P49720.2|PSB3_HUMAN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|15278174|gb|AAH13008.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|119580935|gb|EAW60531.1| proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|261860656|dbj|BAI46850.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|410256642|gb|JAA16288.1| proteasome (prosome, macropain) subunit, beta type, 3 [Pan
troglodytes]
Length = 205
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+PD LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|54696308|gb|AAV38526.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|60812279|gb|AAX36205.1| proteasome subunit beta type 3 [synthetic construct]
Length = 206
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+PD LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|209733400|gb|ACI67569.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + KDFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTKDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V + +I R LK RMD
Sbjct: 181 SGMGVVVQAIEKDKITTRTLKARMD 205
>gi|432957515|ref|XP_004085833.1| PREDICTED: proteasome subunit beta type-3-like [Oryzias latipes]
Length = 205
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKSFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PD+EP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDLEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|185133100|ref|NP_001117722.1| proteasome subunit beta type-3 [Oncorhynchus mykiss]
gi|6093786|sp|O73817.1|PSB3_ONCMY RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|3063687|gb|AAC14141.1| proteasome subunit C10-11 [Oncorhynchus mykiss]
gi|225705904|gb|ACO08798.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V ++ +I R LK RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|197632283|gb|ACH70865.1| proteasome (prosome, macropain) subunit, beta type 3 [Salmo salar]
gi|209735862|gb|ACI68800.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V ++ +I R LK RMD
Sbjct: 181 SGMGVIVQVIEKDKITTRTLKARMD 205
>gi|308321183|gb|ADO27744.1| proteasome subunit beta type-3 [Ictalurus furcatus]
Length = 205
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIASDRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDM P++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDQIGCPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|440804462|gb|ELR25339.1| 20S proteasome subunit beta 3, putative [Acanthamoeba castellanii
str. Neff]
Length = 192
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 148/192 (77%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA D+R G+Q QT+A + ++ +++ + F+GLSGL +D+QTL+ R FRH L
Sbjct: 1 MTGKNCVAIACDKRFGIQHQTLAFNMPKVKQLNSKTFVGLSGLVSDAQTLFNRFQFRHNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LRE R+M PETFA+LVS +LYEKRFGPYF +PVI GLS D KPFI MD IGA LA
Sbjct: 61 YKLRENREMDPETFANLVSTMLYEKRFGPYFVEPVICGLSGPDNKPFIAAMDLIGAPLLA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KD VVAGT E+LYG E+++KPD+EPD+LFET+SQ LLS+V+RD SGWG VYI+TP
Sbjct: 121 KDSVVAGTCSEALYGMTESLWKPDLEPDDLFETISQVLLSAVNRDAFSGWGAVVYIMTPD 180
Query: 193 EIKERILKGRMD 204
E+ + +K RMD
Sbjct: 181 EVITKEIKCRMD 192
>gi|21465651|pdb|1IRU|J Chain J, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465665|pdb|1IRU|X Chain X, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565647|dbj|BAA05645.1| proteasome subunit HsC10-II [Homo sapiens]
gi|1091575|prf||2021261C proteasome:SUBUNIT=HsC10-II
Length = 205
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+PD LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|198423327|ref|XP_002125759.1| PREDICTED: similar to LOC496005 protein [Ciona intestinalis]
Length = 205
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 152/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+VAM GKNC AIASD R G+Q QT+ DF++I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVVAMKGKNCVAIASDLRFGIQAQTVGMDFEKIFPMSERLYIGLTGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
QT+ QRL F+ KLY+LRE R + P+TF S+VS LLYEKRFGPYF +PVIAGL + K PF
Sbjct: 61 QTVSQRLQFQLKLYELRENRQISPKTFLSVVSNLLYEKRFGPYFIEPVIAGLDPKTKEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I + D IG +DFVV GT +YG CEA+++PDMEPD+LFE VSQALL+SVDRD
Sbjct: 121 IASCDLIGCPMEPEDFVVTGTCAIQMYGMCEALWRPDMEPDDLFECVSQALLNSVDRDAG 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+I+ ++ R LK RMD
Sbjct: 181 SGWGAVVHIIEADKVTTRRLKARMD 205
>gi|156539935|ref|XP_001599218.1| PREDICTED: proteasome subunit beta type-3-like isoform 1 [Nasonia
vitripennis]
Length = 205
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI+ +FQ+I ++ L++GL GLATDS
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ +RL FR LY+L+E R + P+TF S++S LLYE+RFGPYF +P++AGL E +PF
Sbjct: 61 QTVMERLRFRLNLYELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPETFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG L +DFVV GT E LYG CEA+++P+++ D+LFET+SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCLNLPEDFVVGGTCSEQLYGMCEALYEPNLDADDLFETISQALVNACDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+I+ +I R +K RMD
Sbjct: 181 SGWGAIVHIIEKDKITTRTIKTRMD 205
>gi|426348535|ref|XP_004041889.1| PREDICTED: proteasome subunit beta type-3 [Gorilla gorilla gorilla]
Length = 205
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPHTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|338710899|ref|XP_001501618.2| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 205
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
Length = 205
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF++I +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKIFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T++QRL+FR LY++RE R M PE FA+++S LYEKRFGPYF +PVIAGL + +PF
Sbjct: 61 LTVHQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKSYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE ++KPD+EP LFE +SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCPNKPNDFVVAGTCAEQLYGMCETLWKPDLEPTALFEVISQALVNAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ ++ + LK RMD
Sbjct: 181 SGWGATVYIIEKEKLTVKKLKTRMD 205
>gi|348521013|ref|XP_003448021.1| PREDICTED: proteasome subunit beta type-3-like [Oreochromis
niloticus]
Length = 202
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 155/200 (77%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + DFVV+GT E +YG CE++++PDMEPD+LFET+SQA+L++VDRD +SG G
Sbjct: 123 LIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAMLNAVDRDAVSGMGV 182
Query: 185 HVYIVTPTEIKERILKGRMD 204
V++V +I R LK RMD
Sbjct: 183 VVHVVEKDKITTRTLKARMD 202
>gi|318102146|ref|NP_001188163.1| proteasome subunit beta type-3 [Ictalurus punctatus]
gi|308323613|gb|ADO28942.1| proteasome subunit beta type-3 [Ictalurus punctatus]
Length = 205
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIASDRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDM P++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
Length = 204
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 158/204 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG + +AMVGK C AIASD RLG Q ++ +F +I + ++ ++GL+GLATD
Sbjct: 1 MSIMEYNGGSCIAMVGKECVAIASDLRLGAQSVSLTNNFPKIFSMTEKTYLGLTGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL++ ++ +Y+LREER ++P+TFA+LVS+ LYEKRF PYF P++AGLS ++PFI
Sbjct: 61 QTLHELFRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFTFPIVAGLSKTNEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C DSIG + AKDF V+GTA + LYG CE +++PD+EP++LFET+SQALL+++DRDC+S
Sbjct: 121 CGFDSIGCIDFAKDFAVSGTASDHLYGICEDLYEPDLEPEDLFETISQALLNAIDRDCIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY+++ + +R++KGR D
Sbjct: 181 GWGCVVYVISKDKCMKRLVKGRQD 204
>gi|383854573|ref|XP_003702795.1| PREDICTED: proteasome subunit beta type-3-like [Megachile
rotundata]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M I +YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MGILDYNGGAIIAMRGKNCVAIAADRRFGIQAQTITCDFQKIFEMGPHLYMSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ +RL FR LY+L+E R + P+TFAS+VS LLYE+RFGPYF QP+IAGLS +P+
Sbjct: 61 QTVMERLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVQPIIAGLSPVTFEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + DFVV GT E LYG CE++F+PD+E D+LFET+SQAL+++ DRD +
Sbjct: 121 ICNMDVIGCINPSDDFVVGGTCSEQLYGMCESVFEPDLEADDLFETISQALVNACDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ ++ R +K RMD
Sbjct: 181 SGWGAVVYIIEKDKVTTRSIKTRMD 205
>gi|225705836|gb|ACO08764.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM G+ C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGQQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V ++ +I R LK RMD
Sbjct: 181 SGMGVVVQVIEKDKITARTLKARMD 205
>gi|332017819|gb|EGI58480.1| Proteasome subunit beta type-3 [Acromyrmex echinatior]
Length = 238
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 155/204 (75%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+Q
Sbjct: 35 SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTITCDFQKIYEMGPHLYVSLPGLATDTQ 94
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ +RL FR LY+L+E R + P+TF +++S LLYE+RFGPYF +P++AGL +PFI
Sbjct: 95 TVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTFEPFI 154
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD IG++ +A+DFVV GT E LYG CE++++P++ P+ELFETVSQAL+++ DRD +S
Sbjct: 155 CNMDLIGSRNIAEDFVVGGTCTEQLYGMCESLYEPNLGPEELFETVSQALVNAFDRDAIS 214
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VYI+ ++ +R +K RMD
Sbjct: 215 GWGAVVYIIEKDKVTKRTVKTRMD 238
>gi|291405921|ref|XP_002719377.1| PREDICTED: proteasome beta 3 subunit [Oryctolagus cuniculus]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTYKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|383873358|ref|NP_001244746.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|332258335|ref|XP_003278254.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Nomascus
leucogenys]
gi|402899980|ref|XP_003912961.1| PREDICTED: proteasome subunit beta type-3 [Papio anubis]
gi|403279415|ref|XP_003931246.1| PREDICTED: proteasome subunit beta type-3 [Saimiri boliviensis
boliviensis]
gi|355754088|gb|EHH58053.1| Proteasome subunit beta type-3 [Macaca fascicularis]
gi|380788351|gb|AFE66051.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|383414525|gb|AFH30476.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|384948330|gb|AFI37770.1| proteasome subunit beta type-3 [Macaca mulatta]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|327275596|ref|XP_003222559.1| PREDICTED: proteasome subunit beta type-3-like [Anolis
carolinensis]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRLFIGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLFIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+L+E R +KP+T S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLDPITYEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C++D IG DFVV+GT E +YG CE++++PDMEPD LFET+ QA+L++VDRD +
Sbjct: 121 VCSLDLIGCPMTTDDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETIGQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
Length = 205
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ ++ R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKVTTRTLKARMD 205
>gi|417397057|gb|JAA45562.1| Putative proteasome subunit beta type-3 [Desmodus rotundus]
Length = 205
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKDCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRPIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++PDM+PD LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPDMDPDHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
Length = 205
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A + M GKNC AIASD R G+Q QTI+ D+ ++ +++D+ FIG+SGL TD+
Sbjct: 1 MSIMAYNGGACIVMTGKNCVAIASDLRFGIQQQTISNDYPKVYRVNDKCFIGISGLVTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
QTL+Q++VFRH LY+LREERDM P+ +L++ +LYEKRFGPYF +P+I GL D P+
Sbjct: 61 QTLHQKIVFRHNLYKLREERDMSPKVVTNLIANMLYEKRFGPYFTEPLICGLEGPDNTPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I MD IGA+ DF+V GT ++YG CE ++K DM DELFET+SQ +L+S++RD L
Sbjct: 121 ISGMDLIGAQVQTDDFLVVGTMTPAMYGVCETLYKKDMNEDELFETISQCMLASLERDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V I+TPT++ + L GR D
Sbjct: 181 SGWGAVVNIITPTKLITKKLIGRQD 205
>gi|356461018|ref|NP_001239086.1| proteasome subunit beta type-3 [Canis lupus familiaris]
gi|354474809|ref|XP_003499622.1| PREDICTED: proteasome subunit beta type-3-like [Cricetulus griseus]
Length = 205
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|209737458|gb|ACI69598.1| Proteasome subunit beta type-3 [Salmo salar]
gi|303661230|gb|ADM16027.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E ++G CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMHGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V ++ +I R LK RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|353239440|emb|CCA71352.1| probable PUP3-20S proteasome subunit beta3 [Piriformospora indica
DSM 11827]
Length = 205
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 156/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM GK+C AIASD RLG Q TIAT+F+++ + +R+ +G++GLATD
Sbjct: 1 MSIMEYNGGSVVAMAGKDCVAIASDLRLGNQALTIATNFEKVFPVTERIMLGMAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
TL R FR +Y ++EER+++PETFA LVS+ LYE+RFGPYF +PVIAGL +KPF
Sbjct: 61 LTLRDRFRFRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLGKGTNKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I + D IG AKDFVVAGTA + L+G E++++PD+EP++LFET+SQ L+++VDRD
Sbjct: 121 IASTDVIGCINFAKDFVVAGTATDKLFGVAESLWEPDLEPEDLFETISQTLMNAVDRDAF 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+I+TP ++ R LK RMD
Sbjct: 181 SGWGAVVHIITPEKVITRHLKARMD 205
>gi|452824977|gb|EME31976.1| proteasome beta subunit [Galdieria sulphuraria]
Length = 206
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 151/203 (74%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG ++AM G NC AIA+DRR GVQ TI TD RI KI+DRL +GL+GL TD
Sbjct: 4 SILTYNGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVT 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TLY R V R LY+LREER++KP +FA++V++ LY +RF PYF +PV+AGL+++ +P++C
Sbjct: 64 TLYNRFVQRLNLYRLREEREIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLC 123
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
D +GA A+DFVV+GT ESLYG E +KP++ P ELFE SQ+LL++VDRDCLSG
Sbjct: 124 AQDLLGAPLFAEDFVVSGTCAESLYGTSETFWKPNLSPAELFEVTSQSLLAAVDRDCLSG 183
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WG V+++T I+ ++LK RMD
Sbjct: 184 WGAIVHMITLNGIETKVLKARMD 206
>gi|77736139|ref|NP_001029768.1| proteasome subunit beta type-3 [Bos taurus]
gi|426237857|ref|XP_004012874.1| PREDICTED: proteasome subunit beta type-3 [Ovis aries]
gi|108935878|sp|P33672.3|PSB3_BOVIN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|74354224|gb|AAI02555.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|154426162|gb|AAI51436.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|296476492|tpg|DAA18607.1| TPA: proteasome subunit beta type-3 [Bos taurus]
Length = 205
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|8394082|ref|NP_058981.1| proteasome subunit beta type-3 [Rattus norvegicus]
gi|730380|sp|P40112.1|PSB3_RAT RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|458731|dbj|BAA04824.1| proteasome subunit RC10-II [Rattus sp.]
gi|54261675|gb|AAH84723.1| Proteasome (prosome, macropain) subunit, beta type 3 [Rattus
norvegicus]
gi|149054057|gb|EDM05874.1| rCG33987, isoform CRA_a [Rattus norvegicus]
Length = 205
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+I+ +I R LK RMD
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARMD 205
>gi|6755202|ref|NP_036101.1| proteasome subunit beta type-3 [Mus musculus]
gi|9910831|sp|Q9R1P1.1|PSB3_MOUSE RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|378792311|pdb|3UNB|I Chain I, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792325|pdb|3UNB|W Chain W, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792339|pdb|3UNB|KK Chain k, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792353|pdb|3UNB|YY Chain y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792367|pdb|3UNE|I Chain I, Mouse Constitutive 20s Proteasome
gi|378792381|pdb|3UNE|W Chain W, Mouse Constitutive 20s Proteasome
gi|378792395|pdb|3UNE|KK Chain k, Mouse Constitutive 20s Proteasome
gi|378792409|pdb|3UNE|YY Chain y, Mouse Constitutive 20s Proteasome
gi|378792423|pdb|3UNF|I Chain I, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792437|pdb|3UNF|W Chain W, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792451|pdb|3UNH|I Chain I, Mouse 20s Immunoproteasome
gi|378792465|pdb|3UNH|W Chain W, Mouse 20s Immunoproteasome
gi|5757661|gb|AAD50537.1|AF060092_1 proteasome subunit C10-II [Mus musculus]
gi|12832232|dbj|BAB22017.1| unnamed protein product [Mus musculus]
gi|12845973|dbj|BAB26979.1| unnamed protein product [Mus musculus]
gi|15928628|gb|AAH14783.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|68085773|gb|AAH98233.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|74139857|dbj|BAE31772.1| unnamed protein product [Mus musculus]
gi|148684145|gb|EDL16092.1| mCG13231, isoform CRA_b [Mus musculus]
gi|444713978|gb|ELW54866.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 205
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
laevis]
gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
Length = 205
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|193788711|ref|NP_001123295.1| proteasome subunit beta type-3 [Danio rerio]
gi|29124577|gb|AAH49010.1| Psmb3 protein [Danio rerio]
Length = 205
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDM+P++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|222136592|ref|NP_001138374.1| proteasome subunit beta type-3 [Sus scrofa]
Length = 205
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++PDM+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPDMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|410980899|ref|XP_003996811.1| PREDICTED: proteasome subunit beta type-3 [Felis catus]
Length = 205
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDRITTRTLKARMD 205
>gi|332375660|gb|AEE62971.1| unknown [Dendroctonus ponderosae]
Length = 205
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 152/205 (74%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM G+NC AIA+DRR GVQ QT+AT+F++I ++ L++GL GLATD+
Sbjct: 1 MSILTYNGGAMLAMKGENCVAIAADRRFGVQAQTLATNFEKIFEMGSHLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR +Y+L+E R M P F+++VS LLYE RFGPYF +PV+AGL + +PF
Sbjct: 61 QTVMEKLRFRKNIYELKENRAMSPRVFSAMVSHLLYENRFGPYFVEPVVAGLEPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG KDFVV GTA LYG CEA+++P++ PDELFET SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCINQPKDFVVGGTASAQLYGMCEALWEPNLTPDELFETTSQALINAFDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ ++ + LK RMD
Sbjct: 181 SGWGATVYIIEKDKVTIKNLKTRMD 205
>gi|355568453|gb|EHH24734.1| Proteasome subunit beta type-3, partial [Macaca mulatta]
Length = 204
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 1 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 60
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFI
Sbjct: 61 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +S
Sbjct: 121 CSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
G G V+I+ +I R LK RMD
Sbjct: 181 GMGVIVHIIEKDKITTRTLKARMD 204
>gi|431890707|gb|ELK01586.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 234
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 31 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 90
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFI
Sbjct: 91 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 150
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +S
Sbjct: 151 CSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 210
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
G G V+I+ +I R LK RMD
Sbjct: 211 GMGVIVHIIEKDKITTRTLKARMD 234
>gi|225703360|gb|ACO07526.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQVVTTDFQKIFPMGDRLHIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++V RD +
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVGRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V ++ +I R LK RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|440904222|gb|ELR54761.1| Proteasome subunit beta type-3, partial [Bos grunniens mutus]
Length = 205
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 2 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFI
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +S
Sbjct: 122 CSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 181
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
G G V+I+ +I R LK RMD
Sbjct: 182 GMGVIVHIIEKDKITTRTLKARMD 205
>gi|297701417|ref|XP_002827712.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Pongo abelii]
Length = 218
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T SLV+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSLVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRM 203
SG G V+I+ +I R LK R+
Sbjct: 181 SGMGVIVHIIEKDKITTRTLKARI 204
>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
NRRL Y-27907]
Length = 206
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 153/199 (76%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIASD RLG Q ++ +F++I D+ F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCIAIASDLRLGNQSLGVSNNFEKIFGFGDKCFLGLTGLATDVLTLKET 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER ++PET A+LVS+ LYE+RFGPYF P++AGL +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERSIEPETLANLVSSTLYERRFGPYFVSPIVAGLGHKDNKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + LYG CE++++PD+EP++LFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDFAKDFIVSGTASDQLYGMCESLYEPDLEPEQLFETISQALLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYIVT ++ +R+LK R D
Sbjct: 188 VYIVTKDKVVKRVLKTRQD 206
>gi|126308249|ref|XP_001371633.1| PREDICTED: proteasome subunit beta type-3-like [Monodelphis
domestica]
Length = 202
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 152/200 (76%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + +PFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPFICSLD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + DFVV+GT E +YG CE++++PDMEP+ LFET+SQA+L++VDRD +SG G
Sbjct: 123 LIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAVSGMGV 182
Query: 185 HVYIVTPTEIKERILKGRMD 204
V+I+ +I R LK RMD
Sbjct: 183 IVHIIEKDKITTRTLKARMD 202
>gi|269972971|emb|CBE67030.1| CG11981-PA [Drosophila atripex]
gi|269973424|emb|CBE66639.1| CG11981-PA [Drosophila ananassae]
gi|269973426|emb|CBE66640.1| CG11981-PA [Drosophila ananassae]
gi|269973428|emb|CBE66641.1| CG11981-PA [Drosophila ananassae]
gi|269973430|emb|CBE66642.1| CG11981-PA [Drosophila ananassae]
gi|269973432|emb|CBE66643.1| CG11981-PA [Drosophila ananassae]
gi|269973434|emb|CBE66644.1| CG11981-PA [Drosophila ananassae]
gi|269973436|emb|CBE66645.1| CG11981-PA [Drosophila ananassae]
gi|269973438|emb|CBE66646.1| CG11981-PA [Drosophila ananassae]
gi|269973440|emb|CBE66647.1| CG11981-PA [Drosophila ananassae]
gi|269973442|emb|CBE66648.1| CG11981-PA [Drosophila ananassae]
gi|269973444|emb|CBE66649.1| CG11981-PA [Drosophila ananassae]
gi|269973446|emb|CBE66650.1| CG11981-PA [Drosophila ananassae]
Length = 205
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL KPF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE +++PD+EPD+LFE ++Q+++++ DRD +
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMMNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I ER LK RMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|323454510|gb|EGB10380.1| hypothetical protein AURANDRAFT_71184 [Aureococcus anophagefferens]
Length = 535
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 145/190 (76%), Gaps = 4/190 (2%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG+A+V M GKNC AIASD R G+ QT++ DFQ++ K DRLF+GL+GLATD QTL
Sbjct: 194 HNGAAIVCMAGKNCVAIASDTRFGLSQQTVSCDFQKVFKQSDRLFVGLAGLATDVQTLRN 253
Query: 66 RLVFRHK----LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L F+ + LY+LREER MKPE FA+L+S +LYEKRFGPYF +PV+AGL D+ PF+C
Sbjct: 254 TLKFKREPALALYELREERVMKPEAFAALLSHMLYEKRFGPYFVEPVVAGLKDDGSPFLC 313
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
MD IGA D+VV+GT +L G CE+M++PDM PDELFET+SQ LL+SVDRD LSG
Sbjct: 314 GMDLIGAPVYTDDYVVSGTCTPNLNGMCESMWRPDMGPDELFETISQCLLASVDRDALSG 373
Query: 182 WGGHVYIVTP 191
WG V+++TP
Sbjct: 374 WGATVHVLTP 383
>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
Length = 205
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTLKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IG DFVVAGT E LYG CE ++KPD++PD+LFE ++Q+++++ DRD +
Sbjct: 121 VCNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWKPDLQPDQLFEVIAQSMMNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I ER LK RMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
Length = 205
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL KPF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE +++PD+EPD+LFE ++Q+++++ DRD +
Sbjct: 121 ICNMDLIGCPNEPVDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMMNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I ER LK RMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|351723049|ref|NP_001237521.1| uncharacterized protein LOC100527027 [Glycine max]
gi|255631394|gb|ACU16064.1| unknown [Glycine max]
Length = 123
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 114/123 (92%), Positives = 119/123 (96%)
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
MKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFICTMD IGAKELAKDFVV+GTA
Sbjct: 1 MKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKELAKDFVVSGTA 60
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKG 201
ESLYGACEAMFKPDMEP+ELFET+SQALLSSVDRDCLSGWGGHVY+VTP E+KERILKG
Sbjct: 61 SESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPNEVKERILKG 120
Query: 202 RMD 204
RMD
Sbjct: 121 RMD 123
>gi|392883970|gb|AFM90817.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG+A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG DFVV+GT E +YG CE++++PD+E ++LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFETISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|351706755|gb|EHB09674.1| Proteasome subunit beta type-3 [Heterocephalus glaber]
Length = 217
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 154/204 (75%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+D+R G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 14 SIMSYNGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 73
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPFI
Sbjct: 74 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFI 133
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +S
Sbjct: 134 CSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 193
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
G G V+++ +I R LK RMD
Sbjct: 194 GMGVVVHVIEKDKITTRTLKARMD 217
>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
Length = 205
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR +Y+ +E R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE +++PD+EPD+LFE +SQ+++++ DRD +
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVISQSMVNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I ER LK RMD
Sbjct: 181 SGWGATVYIIEKDKITERSLKTRMD 205
>gi|149054060|gb|EDM05877.1| rCG33987, isoform CRA_d [Rattus norvegicus]
Length = 202
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 152/200 (76%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G
Sbjct: 123 LIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGV 182
Query: 185 HVYIVTPTEIKERILKGRMD 204
V+I+ +I R LK RMD
Sbjct: 183 IVHIIEKDKITTRTLKARMD 202
>gi|21355629|ref|NP_649858.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|194903499|ref|XP_001980880.1| GG17403 [Drosophila erecta]
gi|195330532|ref|XP_002031957.1| GM26292 [Drosophila sechellia]
gi|195499293|ref|XP_002096887.1| GE24806 [Drosophila yakuba]
gi|195572401|ref|XP_002104184.1| GD20828 [Drosophila simulans]
gi|17380236|sp|Q9XYN7.1|PSB3_DROME RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|4559288|gb|AAD22968.1|AF116898_1 20S proteasome beta3 subunit [Drosophila melanogaster]
gi|7299121|gb|AAF54320.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|20151995|gb|AAM11357.1| LD16402p [Drosophila melanogaster]
gi|116806244|emb|CAL26545.1| CG11981 [Drosophila melanogaster]
gi|116806246|emb|CAL26546.1| CG11981 [Drosophila melanogaster]
gi|116806248|emb|CAL26547.1| CG11981 [Drosophila melanogaster]
gi|116806250|emb|CAL26548.1| CG11981 [Drosophila melanogaster]
gi|116806252|emb|CAL26549.1| CG11981 [Drosophila melanogaster]
gi|116806254|emb|CAL26550.1| CG11981 [Drosophila melanogaster]
gi|116806256|emb|CAL26551.1| CG11981 [Drosophila melanogaster]
gi|116806258|emb|CAL26552.1| CG11981 [Drosophila melanogaster]
gi|116806260|emb|CAL26553.1| CG11981 [Drosophila simulans]
gi|190652583|gb|EDV49838.1| GG17403 [Drosophila erecta]
gi|194120900|gb|EDW42943.1| GM26292 [Drosophila sechellia]
gi|194182988|gb|EDW96599.1| GE24806 [Drosophila yakuba]
gi|194200111|gb|EDX13687.1| GD20828 [Drosophila simulans]
gi|220942808|gb|ACL83947.1| Prosbeta3-PA [synthetic construct]
gi|223967619|emb|CAR93540.1| CG11981-PA [Drosophila melanogaster]
gi|223967621|emb|CAR93541.1| CG11981-PA [Drosophila melanogaster]
gi|223967623|emb|CAR93542.1| CG11981-PA [Drosophila melanogaster]
gi|223967625|emb|CAR93543.1| CG11981-PA [Drosophila melanogaster]
gi|223967627|emb|CAR93544.1| CG11981-PA [Drosophila melanogaster]
gi|223967629|emb|CAR93545.1| CG11981-PA [Drosophila melanogaster]
gi|223967631|emb|CAR93546.1| CG11981-PA [Drosophila melanogaster]
gi|223967633|emb|CAR93547.1| CG11981-PA [Drosophila melanogaster]
gi|223967635|emb|CAR93548.1| CG11981-PA [Drosophila melanogaster]
gi|223967637|emb|CAR93549.1| CG11981-PA [Drosophila melanogaster]
gi|223967639|emb|CAR93550.1| CG11981-PA [Drosophila melanogaster]
Length = 205
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R G+Q QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE ++KPD+EPD+LFE ++Q+++++ DRD +
Sbjct: 121 ICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I ER LK RMD
Sbjct: 181 SGWGATVYIIEKDKITERTLKTRMD 205
>gi|388852079|emb|CCF54255.1| probable PUP3-20S proteasome subunit beta3 [Ustilago hordei]
Length = 204
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 153/204 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ +IGL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL ++ +R +Y+++EERD++PE FA LVS+ LYE+RFGPYF +PVIAG++ +++PFI
Sbjct: 61 TTLREKFRYRVNMYKMKEERDIEPEVFAQLVSSTLYERRFGPYFIEPVIAGINSKNEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D +G AKDFVV+GTAG+ L+G E +++PD+ P+ELFETVSQ LL +++RD LS
Sbjct: 121 AASDVVGCLNFAKDFVVSGTAGDKLFGMAEGLWEPDLGPEELFETVSQILLGALERDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V I+TP ++ ER LK RMD
Sbjct: 181 GWGAIVRIITPEKVIERTLKARMD 204
>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
Length = 205
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR +Y+ +E R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE +++PD+EPD+LFE ++Q+++++ DRD +
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMVNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I ER LK RMD
Sbjct: 181 SGWGATVYIIEKDKITERTLKTRMD 205
>gi|170085607|ref|XP_001874027.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
gi|164651579|gb|EDR15819.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
Length = 208
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 152/208 (73%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAMVGK+C AIASD RLG Q I+++FQ+I I DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVVAMVGKDCVAIASDLRLGNQALGISSNFQKIFPITDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R FR +Y ++EER+++PETFA LVS+ LYE RFGPYF +PV+AGLS
Sbjct: 61 TTLRERFRFRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFVEPVMAGLSKTPSGGV 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KPFI D IG AKDFVVAGTA LYG E +++PD+E ++LFET+SQ LL++VDR
Sbjct: 121 KPFIAATDLIGCLNFAKDFVVAGTASSKLYGVAEGLWEPDLEAEDLFETISQTLLNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T ++ R LKGRMD
Sbjct: 181 DAYSGWGCIVHVITKDKVVTRTLKGRMD 208
>gi|387914628|gb|AFK10923.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG+A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG DFVV+GT E +YG CE++++PD+E + LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEALFETISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|336376544|gb|EGO04879.1| hypothetical protein SERLA73DRAFT_173986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389555|gb|EGO30698.1| hypothetical protein SERLADRAFT_454981 [Serpula lacrymans var.
lacrymans S7.9]
Length = 208
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 150/208 (72%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q +I+++FQ++ + DR+++GL GL TD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALSISSNFQKVFPVTDRIYVGLPGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R +R +Y ++EER+++PETFA LVS+ LYE RFGPYF +PVIAGLS
Sbjct: 61 TTLRERFRYRINMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVIAGLSKTPSGGV 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KP I D IG AKDFVVAGTA L G E +++PD+EP++LFET+SQ LL+SVDR
Sbjct: 121 KPLIAAADLIGCLNFAKDFVVAGTASTKLLGVAEGLWEPDLEPEDLFETISQTLLNSVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T I R LKGRMD
Sbjct: 181 DAFSGWGAVVHVITKDSIISRTLKGRMD 208
>gi|225705338|gb|ACO08515.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I ++ IG + +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +
Sbjct: 121 IRSLGLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V ++ +I R LK RMD
Sbjct: 181 SGMGVVVQVIEKDKITTRTLKARMD 205
>gi|303287020|ref|XP_003062799.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455435|gb|EEH52738.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 150/206 (72%), Gaps = 2/206 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATD 59
+SI YNG+A++AM GKNC AIASD R G+ Q QT A D ++I +IH L++GLSG +
Sbjct: 1 VSIMSYNGAAIIAMCGKNCVAIASDLRFGINQQQTTAVDMKKIYEIHPHLYVGLSGASES 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KP 118
+ Y R FRH LY+LRE RDM+PETFA++VSA+LYEKRFGPY+ +PV+AGL +P
Sbjct: 61 HWSPYDRFAFRHNLYKLREGRDMRPETFANVVSAMLYEKRFGPYYAEPVVAGLDPVTFEP 120
Query: 119 FICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
FI MD IGA +FVV G ESL+G CE+M+KPD+EP+ELFE ++Q LL+ RDC
Sbjct: 121 FITGMDLIGAAAPTDNFVVCGNNEESLFGVCESMYKPDLEPEELFEVIAQCLLAGSGRDC 180
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
L+GWGG V++++ + R LKGRMD
Sbjct: 181 LAGWGGVVHVISKDKRITRTLKGRMD 206
>gi|301762874|ref|XP_002916854.1| PREDICTED: proteasome subunit beta type-3-like [Ailuropoda
melanoleuca]
Length = 202
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 152/200 (76%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G
Sbjct: 123 LIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGV 182
Query: 185 HVYIVTPTEIKERILKGRMD 204
V+I+ +I R LK RMD
Sbjct: 183 IVHIIEKDKITTRTLKARMD 202
>gi|340923906|gb|EGS18809.1| hypothetical protein CTHT_0054190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 206
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 152/199 (76%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGKNC AIA D RLG+Q T++ +F +I + D +F+GL+GLATD QT+
Sbjct: 8 NGGACVAMVGKNCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVQTVADI 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ LY+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DS
Sbjct: 68 FRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGEPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE++++PD+ P+ELFET+SQALL++VDRD LSGWG H
Sbjct: 128 IGCIDFAKDFIVSGTATEQLFGMCESLWEPDLGPEELFETISQALLNAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|390595223|gb|EIN04629.1| 20S proteasome subunit beta 3 [Punctularia strigosozonata HHB-11173
SS5]
Length = 224
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 154/224 (68%), Gaps = 20/224 (8%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI E NG ++VAMVGK+C AIASD RLG Q Q +A +FQ++ I DR+++GL GLATD
Sbjct: 1 MSIMETNGGSVVAMVGKDCVAIASDLRLGNQAQGLAANFQKVFSITDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------- 113
TLY+R FR +Y ++EER++ PETFA LVS+ LYE RFGPYF +PVIAG+S
Sbjct: 61 TTLYERFRFRTNMYTIKEEREISPETFAHLVSSTLYEHRFGPYFIEPVIAGISAAPTASP 120
Query: 114 -------------DEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPD 160
+ +PFI D IG AKDFVVAGTA +L+G E +++PD+EP+
Sbjct: 121 SAVSSGTLAPPPGKKWQPFIAATDVIGCINFAKDFVVAGTASSTLFGVAEGLWEPDLEPE 180
Query: 161 ELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+LFET+SQ +L+++DRD SGWG V+++TP ++ R LK RMD
Sbjct: 181 DLFETISQTMLNALDRDAYSGWGVVVHVITPDKVITRTLKARMD 224
>gi|323508047|emb|CBQ67918.1| probable PUP3-20S proteasome subunit beta3 [Sporisorium reilianum
SRZ2]
Length = 204
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 152/204 (74%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ ++GL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL +R +R +Y+++EERD++PE FA LVS+ LYE+RFGPYF +PVIAG++ +++PFI
Sbjct: 61 ATLKERFRYRVNMYKMKEERDIEPEIFAHLVSSTLYERRFGPYFIEPVIAGINSKNEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D +G AKDFVV+GTA + L+G E +++PD+ P+ELFETVSQ LL +++RD LS
Sbjct: 121 AASDVVGCLNFAKDFVVSGTAADKLFGMAEGLWEPDLGPEELFETVSQILLGALERDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V ++TP ++ ER LK RMD
Sbjct: 181 GWGAIVRVITPNKVIERTLKARMD 204
>gi|392877590|gb|AFM87627.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG+A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG DFVV+GT E +YG CE++++PD+E ++LFE +SQA+L++VDRD +
Sbjct: 121 ICSLDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFEPISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|241957591|ref|XP_002421515.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative
[Candida dubliniensis CD36]
gi|223644859|emb|CAX40854.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 206
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F++I + D+ F+GL+GLATD TL +
Sbjct: 8 NGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVITLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER+++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + + DF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYIVT ++ +R+LK R D
Sbjct: 188 VYIVTKDKVIKRVLKTRQD 206
>gi|296425517|ref|XP_002842287.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638550|emb|CAZ86478.1| unnamed protein product [Tuber melanosporum]
Length = 593
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 154/199 (77%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A+VAMVGK+C AIA D RLG+Q T++ DF +I D +++GL+GLATD ++ +
Sbjct: 396 NGGAVVAMVGKDCVAIACDLRLGMQALTVSNDFPKIFNYGD-VYLGLTGLATDVTSVSEL 454
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREERD++P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DS
Sbjct: 455 FRYKVNMYRLREERDIEPQTMANLVSSSLYEKRFGPYFVSPVIAGINQHSGKPFICGFDS 514
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG A+DF+V+GTA + L+G CE +++PD+EP++LFET+SQALL+SVDRD LSGWG H
Sbjct: 515 IGCINFAEDFIVSGTASDQLFGTCEGLWEPDLEPEDLFETISQALLNSVDRDALSGWGAH 574
Query: 186 VYIVTPTEIKERILKGRMD 204
VY+VT ++ +R+LKGR D
Sbjct: 575 VYLVTKDKVVKRLLKGRQD 593
>gi|392597640|gb|EIW86962.1| 20S proteasome subunit beta 3 [Coniophora puteana RWD-64-598 SS2]
Length = 208
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q I+++FQ++ + DR+++GL+GL TD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKVFPVTDRIYVGLAGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R +R +Y ++EER+++PETFA LVS+ LYE RFGPYF +PV+AGLS
Sbjct: 61 ITLRERFRYRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVVAGLSKTPSGGL 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KPFI D IG AKDFVV+GTA L+G E +++PD+EP++LFET+SQ LL++VDR
Sbjct: 121 KPFIAATDLIGCINFAKDFVVSGTASSKLFGLAEGLWEPDLEPEDLFETISQTLLNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T +I R LKGRMD
Sbjct: 181 DAYSGWGAVVHVLTKDKIISRTLKGRMD 208
>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
Length = 205
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR +Y+ +E R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE +++PD+EPD+LFE ++Q+++++ DRD +
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMVNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+I+ +I ER LK RMD
Sbjct: 181 SGWGATVFIIEKDKITERSLKTRMD 205
>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
Length = 208
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 150/208 (72%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG+++VAM GKNC AIA+D RL QL T+ T FQR+ K+ D+ +G+SGL TD
Sbjct: 1 MSIFDYNGNSMVAMSGKNCVAIATDTRLSTQLMTVDTSFQRVFKVTDQCLMGVSGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL---SD-ED 116
QT + F+ +Y+L+E R+MK ETF+ LV+ LYEKRFGPYF PV+AGL SD E
Sbjct: 61 QTFNSLMKFKLNMYRLKEGREMKSETFSKLVATSLYEKRFGPYFVSPVVAGLDKISDTEY 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KP ICT DSIG + +F VAGT E LYG CE ++P++EP+ELF+ +S +LLS++DR
Sbjct: 121 KPVICTYDSIGYRSNNGEFEVAGTGAELLYGVCETFYRPNLEPEELFQVISNSLLSALDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D LSGWG VYI+TPTE+ R LK R D
Sbjct: 181 DSLSGWGSKVYILTPTELIVRSLKTRQD 208
>gi|289742193|gb|ADD19844.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Glossina
morsitans morsitans]
Length = 205
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AI +DRR GVQ QTI+TDF ++ +++ R+F+GL GL TD
Sbjct: 1 MSILTYNGGCVVAMRGKDCVAIGTDRRFGVQAQTISTDFDKVFQMNPRMFLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL FR LY+ RE R+M+PE FA+++S+ LYE RFGP+F +PVIAGL E +PF
Sbjct: 61 LTVKDRLHFRKSLYETRENREMQPERFAAMLSSFLYEHRFGPFFIEPVIAGLDPETMEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + DFVVAGT E LYG CE ++KPDM+ ELFET+SQA++++ DRD +
Sbjct: 121 ICNMDLIGCPNIPDDFVVAGTCYEQLYGMCETLWKPDMKAPELFETISQAMINAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY++ +I + LK RMD
Sbjct: 181 SGWGATVYVIEQDKITIKTLKTRMD 205
>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
Length = 206
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIASD RLG Q ++ +F++I + D+ F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCVAIASDLRLGNQSLGLSNNFEKIFQFGDKTFLGLTGLATDVITLSEV 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PFICTMDS 125
F+H LY+LREERD++P+T A+LVS+ LYEKRFGPYF P++AGL + PFIC DS
Sbjct: 68 FRFKHNLYKLREERDIEPKTLANLVSSTLYEKRFGPYFVSPLVAGLDPKSNVPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V GTA + LYG CE++++P +EP++LFET+SQ LL++VDRD LSGWG
Sbjct: 128 IGCIDFAKDFIVGGTASDQLYGLCESLYEPSLEPEDLFETISQVLLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYIVT +I R+LK R D
Sbjct: 188 VYIVTKDKIIRRVLKTRQD 206
>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
Length = 205
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 142/202 (70%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I YNG+A++AM GKNC AIASD RLG Q QT+ +FQ+I K+ D++FIG +GL +D+QT
Sbjct: 4 IMSYNGAAVIAMKGKNCVAIASDLRLGAQFQTVDCNFQKIYKMTDQIFIGFNGLQSDAQT 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
Q L + Y+LRE RD+ PE F SLV Y+ R+GPYF +PVIAGL +P++
Sbjct: 64 FAQLLTYEVNSYKLRENRDISPEAFGSLVRTKQYQHRWGPYFVEPVIAGLDKNGEPYVNA 123
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MD+IGA F ++ T ESLYG CEA +K +MEP+ELFE +SQ LL+SVDRD SGW
Sbjct: 124 MDTIGAGIYTPKFAISATCAESLYGTCEAFYKDNMEPEELFEVISQCLLASVDRDAYSGW 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
GG VYI+TP I ER LK RMD
Sbjct: 184 GGIVYIITPDRIIERRLKTRMD 205
>gi|392562504|gb|EIW55684.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 208
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 152/208 (73%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK C AIASD RLG Q I+++FQ+I + DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKECVAIASDLRLGNQALGISSNFQKIFPMSDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL + +R +Y ++EER+++PETFA LVS+ LYEKRFGPYF +PV+AGL S
Sbjct: 61 TTLKEVFRYRVNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVMAGLEKTPSGAY 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KPFI D IG AKDFVVAGTA LYG E +++PD+EP++LFET +Q LL++VDR
Sbjct: 121 KPFIAATDLIGCLNFAKDFVVAGTASTKLYGVAEGLWEPDLEPEDLFETCAQTLLNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T ++ +R LKGRMD
Sbjct: 181 DAYSGWGAEVHLITKDKVIKRTLKGRMD 208
>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
Length = 206
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F++I + D+ F+GL+GLATD +L +
Sbjct: 8 NGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVISLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER+++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + + DF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYIVT ++ +R+LK R D
Sbjct: 188 VYIVTKDKVIKRVLKTRQD 206
>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
Length = 206
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 153/199 (76%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q ++ +F++I ++ D+ F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCIAIACDLRLGNQSLGLSNNFEKIFQLGDKTFLGLTGLATDVITLSET 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F++ LY+LREER+++P T A+LVS+ LYEKRFGPYF P++AGL S +KPFIC D
Sbjct: 68 FRFKNNLYKLREEREIEPTTLANLVSSTLYEKRFGPYFVGPIVAGLDSKTNKPFICGFDL 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + LYG CE++++P++EP++LFET+SQ+LL++VDRD LSGWG
Sbjct: 128 IGCIDFAKDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQSLLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYIVT + +R+LK R D
Sbjct: 188 VYIVTKDNVTKRVLKTRQD 206
>gi|242217207|ref|XP_002474405.1| predicted protein [Postia placenta Mad-698-R]
gi|220726447|gb|EED80396.1| predicted protein [Postia placenta Mad-698-R]
Length = 208
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 155/208 (74%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q IA+DF++I + DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGIASDFEKIFPMTDRVYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL ++ +R +Y ++EER+++PETFA LVS+ LYE+RFGPYF +PV+AGL +
Sbjct: 61 TTLREQFRYRLNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVMAGLQRLPNGGY 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KPFI D IG AKDFVVAGTA L+G E +++PD+EP++LFET++Q LL++VDR
Sbjct: 121 KPFIAATDLIGCINFAKDFVVAGTASSKLFGVAEGLWEPDLEPEDLFETIAQTLLNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T + +R+LKGRMD
Sbjct: 181 DAYSGWGAVVHVITKDKAIKRVLKGRMD 208
>gi|348562309|ref|XP_003466953.1| PREDICTED: proteasome subunit beta type-3-like [Cavia porcellus]
Length = 202
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 152/200 (76%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+D+R G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + +PFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFQPFICSLD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G
Sbjct: 123 LIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGV 182
Query: 185 HVYIVTPTEIKERILKGRMD 204
V+++ +I R LK RMD
Sbjct: 183 IVHVIEKDKITTRTLKARMD 202
>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 206
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 149/199 (74%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ +
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFPFGSSTYLGLTGLATDVSTVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+LREERD+ P TFA+LVS+ LYEKRFGP+F PV+AGL S KPFIC DS
Sbjct: 68 FRYKVNMYRLREERDISPRTFANLVSSSLYEKRFGPWFISPVVAGLDSKTGKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+VAGTA + L+G CE +++PD+ P++LFET+SQALLS+VDRD LSGWG H
Sbjct: 128 IGCIDFAKDFIVAGTASDQLFGTCEGLWEPDLGPEDLFETMSQALLSAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|412992168|emb|CCO19881.1| predicted protein [Bathycoccus prasinos]
Length = 209
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 142/193 (73%), Gaps = 1/193 (0%)
Query: 13 AMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
AM G C AIASD RLG+ Q QT A DFQ+I +IH RLF+ +SGLA+D TL F+H
Sbjct: 17 AMCGHECVAIASDNRLGINQQQTTAIDFQKIFQIHPRLFLAMSGLASDMHTLKATFEFKH 76
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKEL 131
KLY+LRE R M+P+TFAS+VS LYEKRFGPY+ +PVIAGL KP+I MD IGA
Sbjct: 77 KLYELRENRVMEPKTFASVVSTTLYEKRFGPYYVEPVIAGLDKASKPYITGMDLIGAAAP 136
Query: 132 AKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTP 191
++FVVAG ESL+G CE+M+K ++EP+ELFE +SQ LLS RDCLSGWGG VY++T
Sbjct: 137 TENFVVAGNNSESLFGVCESMYKENLEPEELFEVISQCLLSGSGRDCLSGWGGTVYVITK 196
Query: 192 TEIKERILKGRMD 204
++ + +KGRMD
Sbjct: 197 DGVEVKSVKGRMD 209
>gi|195444118|ref|XP_002069722.1| GK11424 [Drosophila willistoni]
gi|194165807|gb|EDW80708.1| GK11424 [Drosophila willistoni]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILSYNGGCVVAMRGKECVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFVEPVVAGLHPKTLEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVVAGT E LYG CE +++P+++PD+LFE +SQ+++++ DRD +
Sbjct: 121 ICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLWRPNLDPDQLFEVISQSMVNAFDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY++ +I ER L+ RMD
Sbjct: 181 SGWGATVYVIEKDKITERSLQTRMD 205
>gi|449545308|gb|EMD36279.1| 20S proteasome subunit beta 3 [Ceriporiopsis subvermispora B]
Length = 208
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 156/208 (75%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI + NG +++AMVGK+C AIASD RLG Q I++ F++I + DR+++GL GLATD
Sbjct: 1 MSIMQMNGGSVIAMVGKDCVAIASDLRLGNQSLGISSKFEKIFPMTDRVYVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL+Q+ +R +Y ++EER+++PETFA LVS+ LYEKRFGPYF +PVIAGL S +
Sbjct: 61 TTLHQQFRYRLNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVIAGLQKTPSGDL 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KP+I D IG AKDFVVAGTA + L+G E +++PD+EP++LFET++Q LL++VDR
Sbjct: 121 KPYIAATDLIGCLNFAKDFVVAGTASDKLFGVAEGLWEPDLEPEDLFETIAQTLLNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG VY++T ++ +R LKGRMD
Sbjct: 181 DAYSGWGAVVYVLTKDKVIKRELKGRMD 208
>gi|402225130|gb|EJU05191.1| 20S proteasome subunit beta 3 [Dacryopinax sp. DJM-731 SS1]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM GKNC AIASD RLG Q T+AT+F+++ + D L+ GL+GLATD
Sbjct: 1 MSIMEYNGGSVVAMKGKNCVAIASDLRLGNQAMTVATNFEKVFPVTDSLYCGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
TL +R +R +Y ++EER ++P TFA LVS+ LYE+RFGPYF +PVIAG+S + +PF
Sbjct: 61 ITLRERFRYRVNMYTIKEERQIEPATFAQLVSSTLYERRFGPYFVEPVIAGISKKTGEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I D IG AKDFVV GTA + L+G E +++PDM ++LFET+SQ L+++VDRD
Sbjct: 121 IAAADLIGCLNFAKDFVVCGTASDKLFGVAEGLWEPDMAAEDLFETISQTLMNAVDRDAF 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++TP ++ R LK RMD
Sbjct: 181 SGWGAIVHVITPEKVISRTLKARMD 205
>gi|302925511|ref|XP_003054110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735051|gb|EEU48397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 150/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVNTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKTNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE +++PDMEPD LFET+SQ+LL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASEQLFGMCEGLWEPDMEPDALFETISQSLLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|358391261|gb|EHK40665.1| beta subunit Pup3 of the 20S proteasome [Trichoderma atroviride IMI
206040]
Length = 205
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 150/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE +++PD+EPD LFET+SQALL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQALLTAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
Length = 206
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 149/201 (74%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK C AIA D RLG+Q T++ +F +I + ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKGCVAIACDLRLGLQSLTVSNNFPKIFQYAPSCYLGLTGLATDVSTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
+R +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PV+AG++ KPFIC
Sbjct: 66 DLFRYRVNMYRLREERNISPQTLANLVSSSLYERRFGPYFVSPVLAGINHTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V GTA + L+G CE +++PD+EPDELFETVSQALL++VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVGGTASDQLFGTCEGLWEPDLEPDELFETVSQALLNAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
HVYI+ ++ +R+LKGR D
Sbjct: 186 AHVYIIEKDKVTKRLLKGRQD 206
>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 147/206 (71%), Gaps = 2/206 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATD 59
MSI YNG+A++AM GK+C AIASD RLG+ Q QT A D+ ++ KIHDRL++GL+GL D
Sbjct: 1 MSIMSYNGAAVIAMTGKDCVAIASDLRLGINQNQTAAVDYSKLHKIHDRLYLGLTGLIAD 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
TL Q+L F+H +Y+LRE R M P+ F ++VSA LYEKRF PY+ +PV+AGL + KP+
Sbjct: 61 QLTLAQKLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTEPVVAGLDADGKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I +MD IGA DFVVAG ESL+G CE+ +K D++P+ LFE +S L S V+RDCL
Sbjct: 121 ITSMDLIGADASTDDFVVAGDNVESLFGVCESFYKRDLDPEALFEVISHCLTSGVNRDCL 180
Query: 180 SGWGGHVYIVTPTE-IKERILKGRMD 204
SGWGG V +VT R LK RMD
Sbjct: 181 SGWGGVVTVVTKGNGTFTRTLKSRMD 206
>gi|395331331|gb|EJF63712.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 208
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q I+++FQ+I + +R+F+GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKIFPMTNRIFLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL + +R ++ ++EER+++PETFA LVS+ LYE+RFGP+F +PV+AGL
Sbjct: 61 TTLKETFRYRVNMFTIKEEREIEPETFAHLVSSTLYERRFGPWFIEPVMAGLQKTHDGSY 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KP+I D IG AKDFVVAGTA L+G E +++PD+EP++LFET+SQ LL++VDR
Sbjct: 121 KPYIAATDLIGCLNFAKDFVVAGTASTKLFGVAEGLWEPDLEPEDLFETISQTLLNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG VY++T ++ +R LKGRMD
Sbjct: 181 DAYSGWGAEVYVLTKDKVIKRTLKGRMD 208
>gi|358378900|gb|EHK16581.1| hypothetical protein TRIVIDRAFT_183933 [Trichoderma virens Gv29-8]
Length = 205
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 150/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE +++PD+EPD LFET+SQALL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQALLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|402077481|gb|EJT72830.1| proteasome component PUP3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 153/199 (76%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGAAVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + +PFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSQPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE++++P++EP++LFET+SQALLS+VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASEQLFGMCESLWEPNLEPEDLFETISQALLSAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|68489003|ref|XP_711658.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
gi|46432977|gb|EAK92436.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
Length = 206
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 152/199 (76%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK C AI SD RLG Q ++ +F++I + D+ F+GL+GLATD +L +
Sbjct: 8 NGGAAVAMIGKGCIAIGSDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVISLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER+++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + + DF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYIVT ++ +R+LK R D
Sbjct: 188 VYIVTKDKVIKRVLKTRQD 206
>gi|299756258|ref|XP_002912180.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
gi|298411595|gb|EFI28686.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
Length = 205
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 151/204 (74%), Gaps = 4/204 (1%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG +++AM+GK+C AIASD RLG Q IA+DFQR+ + DR+++GL GLATD TL+
Sbjct: 2 DHNGGSVIAMLGKDCVAIASDLRLGNQALGIASDFQRVFPMTDRIYLGLPGLATDVATLH 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED----KPFI 120
+R FR +Y ++E R+++PE FA LVS+ LYE+RFGPYFC+PV+AG+S KPFI
Sbjct: 62 ERFRFRVNMYTIKEGREIEPEVFAHLVSSTLYERRFGPYFCEPVMAGISKTPTGKIKPFI 121
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IG AKDFVVAGTA LYG E +++PD+EP++LFET+SQ +L++VDRD S
Sbjct: 122 AATDLIGCLNYAKDFVVAGTASAKLYGVAEGLWEPDLEPEDLFETISQTMLNAVDRDAFS 181
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+++T ++ R LKGRMD
Sbjct: 182 GWGAVVHVLTKDKVITRTLKGRMD 205
>gi|340369178|ref|XP_003383125.1| PREDICTED: proteasome subunit beta type-3-like [Amphimedon
queenslandica]
Length = 206
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 146/201 (72%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
EYNGSA+V M+G C AIA+DRRLG+Q QTIAT F +I +++ L+IG GLATD+ T+
Sbjct: 6 EYNGSAVVGMIGSGCVAIAADRRLGIQGQTIATTFDKIYPMNESLYIGFYGLATDALTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PFICTM 123
RL ++ LYQLRE R +KP+ F + S LLY KRFG YF +PVIAGL K P+I TM
Sbjct: 66 SRLKYQLNLYQLRENRQIKPKAFMHMTSNLLYSKRFGYYFVEPVIAGLDPVTKDPYIATM 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D IG KDFVV GT E LYG CE+++KPD+EP++LFET+SQAL+++VDRD LSGWG
Sbjct: 126 DLIGCPMETKDFVVVGTCSEQLYGMCESLWKPDLEPEDLFETISQALMNAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
V+++ ++ R LK RMD
Sbjct: 186 AIVHVIEKDKVTTRTLKARMD 206
>gi|346469345|gb|AEO34517.1| hypothetical protein [Amblyomma maculatum]
Length = 205
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK+C AIA+DRRLG + TIA DFQRI ++ +L+ GL GLATD+
Sbjct: 1 MSIMSYNGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+LRE R + P+T S++S LLYE+RFGPYF QPV+AGL ++P+
Sbjct: 61 QTVAQRLKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDPVTNEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + +DFVVAGT E YG CE +++PDM PDELFE +QAL+++ DRD
Sbjct: 121 ICVMDLIGCIDSPEDFVVAGTCEEQCYGMCETLWEPDMGPDELFEATAQALMNAFDRDSS 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWGG V+++ ++ + LK RMD
Sbjct: 181 SGWGGVVHVIEKDKVTTKYLKTRMD 205
>gi|389626557|ref|XP_003710932.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
gi|351650461|gb|EHA58320.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
Length = 206
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 149/199 (74%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVATVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + PFIC DS
Sbjct: 68 FRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE++++PD+ P++LFET+SQALLS+VDRD LSGWG H
Sbjct: 128 IGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPEDLFETISQALLSAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ + NG A VAM+GK+C AIA D RLG+Q T++ +F +I ++GL+GLATD
Sbjct: 3 SVFDINGGACVAMIGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVS 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ L F+ +Y+LREER + P+T A+LVS+ LYEKRFGPYF PV+AG+++ +PFI
Sbjct: 63 TVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFI 122
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C DSIG + AKDF+V+GTA E L+G CE +++PD+ P++LFET+SQALL++VDRD LS
Sbjct: 123 CGFDSIGCIDFAKDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALS 182
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG HVYI+ ++ +R+LKGR D
Sbjct: 183 GWGAHVYIIEKDKVTKRLLKGRQD 206
>gi|380481881|emb|CCF41580.1| proteasome component PUP3 [Colletotrichum higginsianum]
Length = 205
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 152/199 (76%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE++++PD+ PDELFET+SQ+LL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPDELFETISQSLLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|320590790|gb|EFX03233.1| proteasome component [Grosmannia clavigera kw1407]
Length = 206
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F ++ + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKVFQYGDNVFLGLTGLATDVNTVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ LY+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DS
Sbjct: 68 FRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLEPKTGQPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + A+DF+V+GTA E L+G CE++++PD+ PD LFET+SQALL++VDRD LSGWG H
Sbjct: 128 IGCIDFARDFIVSGTASEQLFGMCESLWEPDLGPDALFETISQALLNAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|389742559|gb|EIM83745.1| 20S proteasome subunit beta 3 [Stereum hirsutum FP-91666 SS1]
Length = 213
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 154/213 (72%), Gaps = 9/213 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG ++VAMVGK+C AIASD RLG Q T+AT+F+++ + DR+++GL GLATD
Sbjct: 1 MSIMQYNGGSVVAMVGKDCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL------SD 114
TL +R FR +Y ++E R+++P TFA LVS+ LYE RFGPYF +PVIAGL +D
Sbjct: 61 TTLRERFRFRVNMYTIKESREIQPSTFAHLVSSTLYEHRFGPYFIEPVIAGLERLPTSTD 120
Query: 115 ED---KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALL 171
E+ +PFI D IG AKDFVVAGTA + L+G E +++ DM P+ELFE +SQ LL
Sbjct: 121 EEPKFEPFIAATDLIGCLNFAKDFVVAGTASDKLFGCAEGLWEEDMNPEELFECISQTLL 180
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
++VDRD SGWG V+++T ++ R+LKGRMD
Sbjct: 181 NAVDRDAYSGWGAVVHVITKDKVVTRMLKGRMD 213
>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 149/198 (75%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG Q +A +F+++ ++ F+GL+GLATD TL +
Sbjct: 8 NGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVITLRED 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
++ LY+LREER+M+P+T A+LVS LYE+RFGPYF P++AGL +PFIC DSI
Sbjct: 68 FRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQPFICGFDSI 127
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + AKDF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG V
Sbjct: 128 GCIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAVV 187
Query: 187 YIVTPTEIKERILKGRMD 204
Y+VT ++ R+L+ R D
Sbjct: 188 YVVTKEKVVRRVLRTRQD 205
>gi|392577300|gb|EIW70429.1| hypothetical protein TREMEDRAFT_68051 [Tremella mesenterica DSM
1558]
Length = 210
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 152/210 (72%), Gaps = 6/210 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM+GK+C AIASD RLG Q +A +F ++ ++D+L+ GL GLATD
Sbjct: 1 MSIMEYNGGSVVAMIGKDCVAIASDLRLGQQSVGVAMNFDKVFPVNDKLYYGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD------ 114
TL ++L FR +Y+++EER++ P+TF LVS+ LYEKRFGPYF +PV+AGL
Sbjct: 61 YTLREQLRFRVNMYRMKEEREITPKTFTHLVSSTLYEKRFGPYFIEPVVAGLPSPTELDP 120
Query: 115 EDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
KPFI TMD+IG KDF VAGTA L+G E +++PD+EP++LFET+SQ LL++V
Sbjct: 121 HPKPFISTMDTIGCITTPKDFAVAGTASNKLFGVAEGLWEPDLEPEDLFETISQTLLNAV 180
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
DRD LSGWG V+++T ++ R L+ RMD
Sbjct: 181 DRDALSGWGAIVHVITHDKVITRQLRARMD 210
>gi|409043787|gb|EKM53269.1| hypothetical protein PHACADRAFT_259498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI ++NG +++AMVGK+C AIASD RLGVQ +I +DF++I + DRLF+GL GLATD
Sbjct: 1 MSIMQHNGGSVIAMVGKDCVAIASDLRLGVQSLSITSDFEKIFPVTDRLFVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL ++ +R +Y ++EER+++P+TFA LVS+ LYE+RFGPYF +PV+AG+
Sbjct: 61 TTLREQFRYRVNMYTIKEEREIEPQTFAQLVSSTLYERRFGPYFIEPVMAGMQKTPAGGY 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
PFI D IG AKDFVVAGTA E L+G E +++PD+E ++LFET+SQ LL+++DR
Sbjct: 121 APFIAATDLIGCLNFAKDFVVAGTASEKLFGVAEGLWEPDLEAEDLFETISQTLLNALDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T ++ R LKGRMD
Sbjct: 181 DAFSGWGAVVHVITKDKVITRKLKGRMD 208
>gi|406701627|gb|EKD04743.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
8904]
Length = 210
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAMVGK+C AIA D RLG Q +A +F+++ ++D L+ GL GLATD
Sbjct: 1 MSIMEYNGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL------SD 114
TL +++ FR +Y+++EER++ P TF +L+S+ LYEKRFGPYF +PV+AG+ +
Sbjct: 61 FTLKEQMRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAPATEANP 120
Query: 115 EDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
+PFI TMD+IG KDF VAGTA E LYG E +++P++EP++LFET+SQ LL++V
Sbjct: 121 NPQPFISTMDTIGCITTPKDFAVAGTATEKLYGTAEGLWEPNLEPEDLFETISQVLLNAV 180
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
DRD LSGWG V+I+T ++ R+L+ RMD
Sbjct: 181 DRDALSGWGAVVHIITKDKVVTRMLRSRMD 210
>gi|302683915|ref|XP_003031638.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
gi|300105331|gb|EFI96735.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
Length = 208
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 153/208 (73%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q Q I+T F++I + DR ++GL+GLA+D
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQAQGISTHFEKIFPVTDRTYVGLAGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL ++ FR +Y ++EER+++PETFA L S+ LYE RFGPYF +PVIAG+ S
Sbjct: 61 LTLREKFRFRVNMYTIKEEREIQPETFAHLASSTLYEHRFGPYFIEPVIAGMQKTPSGGY 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KPFI D IG AKDFV+AGTA E L+G E++++PD+EP++LFET+SQ ++++VDR
Sbjct: 121 KPFIAAADLIGCLNFAKDFVLAGTASEKLFGVAESLWEPDLEPEDLFETISQTIMNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T ++ R LK RMD
Sbjct: 181 DAYSGWGCIVHVITQDKVITRTLKARMD 208
>gi|237830643|ref|XP_002364619.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|211962283|gb|EEA97478.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|221487700|gb|EEE25932.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221507494|gb|EEE33098.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 205
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 150/202 (74%), Gaps = 3/202 (1%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
YNGSA+VAM GK+C IASD RLGV Q T++ DFQ++ K+++ F+GL+GLATD QT++
Sbjct: 4 YNGSAVVAMAGKDCVGIASDTRLGVNQFGTVSADFQKVFKMNNHTFVGLAGLATDVQTVH 63
Query: 65 QRLVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICT 122
+ LVFR LYQLREE +M PE +++VS++LY +RF PYF PV+AGL E +PF+
Sbjct: 64 KELVFRSNLYQLREEVTEMPPEIMSNVVSSMLYGRRFAPYFVSPVVAGLHPETHQPFLSA 123
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
D IGA AKDFV GT+ E L G CE+++KPDM DEL ET+SQ+LL++VDRDC++GW
Sbjct: 124 FDYIGAACYAKDFVCNGTSAEQLVGVCESLWKPDMNEDELMETLSQSLLAAVDRDCVAGW 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G V+++TP I R LK RMD
Sbjct: 184 GAVVHVLTPNTITTRRLKCRMD 205
>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 204
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 155/206 (75%), Gaps = 4/206 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI E NG ++VAMVGK C AIA D RLG Q T+A +F+++ ++ D++FIGL GLATD+
Sbjct: 1 MSIMELNGGSVVAMVGKGCVAIACDLRLGNQALTVACNFEKVFQVTDKMFIGLPGLATDT 60
Query: 61 QTLYQRLVFRHK--LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
TL + VFRH+ +Y+++EER ++P+T A L+S+ LY+KRFGPYF +PV+AGL +++P
Sbjct: 61 FTL--KNVFRHRVNMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVEPVVAGLDSKNEP 118
Query: 119 FICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
FI D IG AKDFVV+GTA L+G EA+++PD+ P++LFET+SQ LL++VDRD
Sbjct: 119 FIAATDLIGCINFAKDFVVSGTASSKLFGMAEALWEPDLAPEDLFETISQTLLNAVDRDA 178
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+I+ ++ +R+LK RMD
Sbjct: 179 YSGWGAVVWIIEADQVTKRVLKSRMD 204
>gi|327304369|ref|XP_003236876.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459874|gb|EGD85327.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 214
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 152/201 (75%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+
Sbjct: 14 DINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVS 73
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
Q L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC
Sbjct: 74 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGF 133
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AK+F+V+GTA + LYG CE++++PD+EP++LFET+SQALL++VDRD LSGWG
Sbjct: 134 DSIGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWG 193
Query: 184 GHVYIVTPTEIKERILKGRMD 204
+VYI+ ++ +R LKGR D
Sbjct: 194 AYVYIIEKDKVTKRKLKGRQD 214
>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
6054]
gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 206
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 152/199 (76%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q +A +F++I + D+ F+GL+GLA+D TL +
Sbjct: 8 NGGSAVAMVGKDCIAIACDLRLGNQSLGLANNFEKIFQFGDKTFLGLTGLASDVTTLSEV 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F++ LY+LREER ++P+T A+LVS+ LYEKRFGPYF P++AGL S KPFIC D
Sbjct: 68 FRFKNNLYKLREERQIEPKTLANLVSSTLYEKRFGPYFIGPIVAGLDSKTSKPFICGFDL 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDFAKDFIVSGTATDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAI 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VY+VT ++ +R+L+ R D
Sbjct: 188 VYVVTKDKVVKRVLRTRQD 206
>gi|326472712|gb|EGD96721.1| proteasome subunit beta type-3 [Trichophyton tonsurans CBS 112818]
gi|326482041|gb|EGE06051.1| proteasome component PUP3 [Trichophyton equinum CBS 127.97]
Length = 206
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 152/201 (75%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
Q L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC
Sbjct: 66 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AK+F+V+GTA + LYG CE++++PD+EP++LFET+SQALL++VDRD LSGWG
Sbjct: 126 DSIGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
+VYI+ ++ +R LKGR D
Sbjct: 186 AYVYIIEKDKVTKRKLKGRQD 206
>gi|145256886|ref|XP_001401548.1| proteasome component PUP3 [Aspergillus niger CBS 513.88]
gi|134058458|emb|CAL00667.1| unnamed protein product [Aspergillus niger]
gi|358366039|dbj|GAA82660.1| proteasome component Pup3 [Aspergillus kawachii IFO 4308]
Length = 206
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVSTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTM 123
++ +Y+LREER++ P+T A+LVS+ LYEKRFGP+F PVIAG+ S KPFIC
Sbjct: 66 DLFRYKVNMYRLREERNIAPQTLANLVSSSLYEKRFGPFFVSPVIAGINSTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA E L+G CE +++PD+ P++LFET+SQALLS+VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 186 AQVYIIEKDKVTKRLLKGRQD 206
>gi|148677981|gb|EDL09928.1| mCG1283 [Mus musculus]
Length = 205
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMPYNGGAVMAMKGKNCVAIAADRCFGIQAQMVTTDFQKIFALGDRLYIGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + K F
Sbjct: 61 QTVAQRLKFRLNLYMLKEGRHIKPFTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKLF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E ++G CE++++P M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMHGMCESLWEPHMDPEHLFETISQAMLNAVDRDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKARMD 205
>gi|409083718|gb|EKM84075.1| hypothetical protein AGABI1DRAFT_110664 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201222|gb|EKV51145.1| 20S proteasome subunit beta 3 [Agaricus bisporus var. bisporus H97]
Length = 208
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AM GK+C AIASD RLG Q+ +I+++FQR+ + DR++IGL GLATD
Sbjct: 1 MSIMEYNGGSVIAMAGKDCVAIASDLRLGNQMLSISSNFQRVFPVTDRIYIGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R R +Y ++EER+++PE F LVS+ LYE RFGPYF PV+AG+S
Sbjct: 61 TTLRERFRLRVNMYTIKEEREIEPEAFTHLVSSTLYEHRFGPYFISPVVAGISKTPTGGI 120
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDR 176
KPFI D IG AKDFVV+GTA L+G E +++PD+ P++LFET+SQ LL++VDR
Sbjct: 121 KPFIAATDLIGCINFAKDFVVSGTASSKLFGVAEGLWEPDLGPEDLFETISQTLLNAVDR 180
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D SGWG V+++T ++ R LK RMD
Sbjct: 181 DAFSGWGAVVHVITKDQVITRKLKARMD 208
>gi|310793894|gb|EFQ29355.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 205
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 152/199 (76%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE++++PD+ P+ELFET+SQ+LL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPEELFETISQSLLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|270008657|gb|EFA05105.1| hypothetical protein TcasGA2_TC015205 [Tribolium castaneum]
Length = 205
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+VAM G C +IASD+R G+Q QTIAT+FQ+I ++ L++GL GLATD+
Sbjct: 1 MSILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R M P+ F++++S +LYE RFGP+F +P++AGL +P+
Sbjct: 61 QTVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG DFVV GTA L+G CE++++P++ PD+LFET SQAL+++ DRD +
Sbjct: 121 ICNMDLIGCPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQALINAFDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ ++ R LK RMD
Sbjct: 181 SGWGAVVYIIEKDKVTVRDLKTRMD 205
>gi|452837699|gb|EME39641.1| hypothetical protein DOTSEDRAFT_75329 [Dothistroma septosporum
NZE10]
Length = 206
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F ++ L++GL+GLATD ++ +
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKVFNYGPSLYLGLTGLATDVSSVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREERD+ P+TFA+LVS+ LYE+RFGP+F PV+AG++ KPFIC DS
Sbjct: 68 FRYKVNMYRLREERDIAPQTFANLVSSSLYERRFGPWFISPVVAGINHTTGKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG H
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|89272044|emb|CAJ83196.1| proteasome (prosome macropain) subunit beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 194
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 150/194 (77%), Gaps = 1/194 (0%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
+AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR
Sbjct: 1 MAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRL 60
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKE 130
LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + KPFIC++D IG
Sbjct: 61 NLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPM 120
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
+DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +SG G V+++
Sbjct: 121 ETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHVIE 180
Query: 191 PTEIKERILKGRMD 204
+I R LK RMD
Sbjct: 181 KDKITTRTLKARMD 194
>gi|255950036|ref|XP_002565785.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592802|emb|CAP99170.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 206
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q TI+ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQSLTISNNFPKIFNYAPSTYLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
++ +Y+LREERD+ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVIAGINPTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALLS+VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQALLSAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 186 AQVYIIEKDKVTQRLLKGRQD 206
>gi|354548652|emb|CCE45389.1| hypothetical protein CPAR2_704030 [Candida parapsilosis]
Length = 206
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 152/199 (76%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F++I + D+ ++ L+GLATD TL++
Sbjct: 8 NGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKIFEFGDKTYMALTGLATDVITLHEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER ++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + + DF+V+GTA + LYG CE +++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDFSHDFIVSGTATDQLYGMCEGLYEPNLEPEDLFETISQALLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+T ++ +R+LK R D
Sbjct: 188 VYIITKDKVVKRVLKTRQD 206
>gi|189205423|ref|XP_001939046.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975139|gb|EDU41765.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 205
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 151/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
Length = 206
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q TI+ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTISNNFPKIFNYAPSTYLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
++ +Y+LREERD+ P+T A+LVS+ LYEKRFGPYF PV+AG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVLAGINPTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALLS+VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQALLSAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 186 AQVYIIEKDKVTQRLLKGRQD 206
>gi|449295365|gb|EMC91387.1| hypothetical protein BAUCODRAFT_39558 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 148/199 (74%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM GKNC AIA D RLG+Q T++ +F +I + F+GL+GLATD T+ +
Sbjct: 8 NGGACVAMRGKNCVAIACDLRLGLQSLTVSNNFPKIFQYSPTAFLGLTGLATDVSTVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREERD+ P+TFA LVS+ LYE+RFGP+F PV+AG+ + PFIC DS
Sbjct: 68 FRYKVNMYRLREERDIAPKTFAQLVSSSLYERRFGPWFVSPVVAGIDGKSGAPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + A DF+V+GTA + L+G CE +++PD+EPD+LFET+SQALL++VDRD LSGWG H
Sbjct: 128 IGCIDYAADFIVSGTASDQLFGTCEGLWEPDLEPDDLFETISQALLNAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|83769195|dbj|BAE59332.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 203
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 151/203 (74%), Gaps = 1/203 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
++ +NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T
Sbjct: 1 MSAHNGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVST 60
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFIC 121
+ ++ +Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG+ S KPFIC
Sbjct: 61 VSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFIC 120
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
DSIG + AKDF+V+GTA + L+G CE++++PD+ P++LFET+SQALLS+VDRD LSG
Sbjct: 121 GFDSIGCIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQALLSAVDRDALSG 180
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WG VYI+ ++ +R+LKGR D
Sbjct: 181 WGAQVYIIEKDKVTKRLLKGRQD 203
>gi|121706806|ref|XP_001271634.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
gi|119399782|gb|EAW10208.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 109/201 (54%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTM 123
F+ +Y+LREER++ P+T A+LVS+ LYE+RFGP+F PVIAG+ S KPFIC
Sbjct: 66 DLFRFKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALLS+VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 186 AQVYIIEKDKVTKRLLKGRQD 206
>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 148/198 (74%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG Q +A +F+++ ++ F+GL+GLATD TL +
Sbjct: 8 NGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVITLRED 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
++ LY+LREER+M+P+T A+LVS LYE+RFGPYF P++AGL +PFIC D I
Sbjct: 68 FRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQPFICGFDLI 127
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + AKDF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG V
Sbjct: 128 GCIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAVV 187
Query: 187 YIVTPTEIKERILKGRMD 204
Y+VT ++ R+L+ R D
Sbjct: 188 YVVTKEKVVRRVLRTRQD 205
>gi|242018983|ref|XP_002429948.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212514994|gb|EEB17210.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 190
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M +NG A+VA+ GKNC AIASDRR GV QTI+ +FQ+I ++ L++GL GLATD+
Sbjct: 1 MFCLSHNGGAVVAVTGKNCVAIASDRRFGVGAQTISCNFQKIFEMGPHLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPF 119
QT+YQRL FR LY+L+E R + P+TF+ ++S LLYE+RFGPYF +PV+AGL KPF
Sbjct: 61 QTVYQRLRFRLNLYELKEGRKIAPKTFSHMMSNLLYERRFGPYFVEPVVAGLDPTTGKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IG + +DFVVAGT E LYG CE +++P++EPDELFE VSQAL+++ DRD +
Sbjct: 121 VCNMDLIGCPNMPEDFVVAGTCSEQLYGMCETLWEPNLEPDELFEVVSQALVNACDRDAI 180
Query: 180 SGWGGHVYIV 189
SGWG V+++
Sbjct: 181 SGWGAIVHVM 190
>gi|225710512|gb|ACO11102.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
Length = 205
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA+VAM GK+C AIASD R G L TI TDF + ++ L++GL+GLATD
Sbjct: 1 MSVFTINGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT++Q+L FR K+++LRE R M+P+TF+ ++S+LLYE+RFGP+F P++AG E+KPF
Sbjct: 61 QTVHQKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I MD IGA + +DFV +GT+ +SL G CEA++ DM PDELFE +SQAL++S DRD L
Sbjct: 121 ISGMDLIGASTIPEDFVASGTSEDSLVGMCEALWFEDMSPDELFEAISQALMNSFDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+GWG V+I+ ++ R LK RMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRLKTRMD 205
>gi|451848501|gb|EMD61806.1| hypothetical protein COCSADRAFT_38618 [Cochliobolus sativus ND90Pr]
Length = 205
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 151/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|91084563|ref|XP_973600.1| PREDICTED: similar to proteasome beta 3 subunit [Tribolium
castaneum]
Length = 210
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 148/204 (72%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A+VAM G C +IASD+R G+Q QTIAT+FQ+I ++ L++GL GLATD+Q
Sbjct: 7 SILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDTQ 66
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ ++L FR LY+L+E R M P+ F++++S +LYE RFGP+F +P++AGL +P+I
Sbjct: 67 TVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPYI 126
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD IG DFVV GTA L+G CE++++P++ PD+LFET SQAL+++ DRD +S
Sbjct: 127 CNMDLIGCPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQALINAFDRDAIS 186
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VYI+ ++ R LK RMD
Sbjct: 187 GWGAVVYIIEKDKVTVRDLKTRMD 210
>gi|427787219|gb|JAA59061.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Rhipicephalus pulchellus]
Length = 205
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK C AIA+DRRLG + TIA DF+RI ++ +L+ GL GLATD+
Sbjct: 1 MSIMSYNGGVVVAMKGKECVAIAADRRLGARGHTIALDFERIFEMGPKLYCGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+LRE R + P+T S++S LLYE+RFGPYF QP++AGL ++P+
Sbjct: 61 QTVAQRLKFRINLYELREGRLITPKTLGSVISNLLYERRFGPYFVQPIVAGLDPVTNEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + DFVV+GT E YG CE +++PDM PDELFE +QAL+++ DRD
Sbjct: 121 ICVMDLIGCIDEPTDFVVSGTCEEQCYGMCETLWEPDMGPDELFEATAQALMNAFDRDSA 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWGG V+I+ ++ + LK RMD
Sbjct: 181 SGWGGVVHIIEKDKVTTKYLKTRMD 205
>gi|302662910|ref|XP_003023105.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
gi|291187083|gb|EFE42487.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
Length = 212
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DS
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AK+F+V+GTA + LYG CE++++PD+EP++LFET+SQALL++VDRD LSGWG +
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LKGR D
Sbjct: 194 VYIIEKDKVTKRKLKGRQD 212
>gi|393222969|gb|EJD08453.1| 20S proteasome subunit beta 3 [Fomitiporia mediterranea MF3/22]
Length = 205
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 151/204 (74%), Gaps = 4/204 (1%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG ++VAMVGK+C AIASD RLG+Q T+A + +++ + DR+++GL+GLATD TL
Sbjct: 2 QYNGGSVVAMVGKDCVAIASDLRLGMQALTVACNHEKVFPVTDRIYLGLAGLATDVATLR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDEDKPFI 120
+R +R +Y ++EERD+ PETFA LVS+ LYEKRFG YF +PVIAG+ + + +P+I
Sbjct: 62 ERFRYRVNMYTIKEERDISPETFARLVSSTLYEKRFGNYFVEPVIAGMGTAPNGKAQPYI 121
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IG AKDFVV GTA + L+G E +++PD+EP++LFET+SQ LL++VDRD S
Sbjct: 122 AAADVIGCLNFAKDFVVVGTASDKLFGVAEGLWEPDLEPEDLFETISQTLLNAVDRDAFS 181
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V+++T ++ R LKGRMD
Sbjct: 182 GWGAVVHVITQDKVITRTLKGRMD 205
>gi|315045460|ref|XP_003172105.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
gi|311342491|gb|EFR01694.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
Length = 212
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DS
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AK+F+V+GTA + LYG CE++++PD+EP++LFET+SQALL++VDRD LSGWG +
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LKGR D
Sbjct: 194 VYIIEKDKVTKRKLKGRQD 212
>gi|398394287|ref|XP_003850602.1| proteasome core particle subunit beta 3 [Zymoseptoria tritici
IPO323]
gi|339470481|gb|EGP85578.1| hypothetical protein MYCGRDRAFT_105064 [Zymoseptoria tritici
IPO323]
Length = 206
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD ++ +
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGSSVYLGLTGLATDVSSVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+LREERD+ P+TF++LVS+ LYE+RFGP+F PV+AG+ KPFIC DS
Sbjct: 68 FRYKVNMYRLREERDISPKTFSNLVSSSLYERRFGPWFVSPVVAGIDGTSGKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG H
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|440636325|gb|ELR06244.1| proteasome component PUP3 [Geomyces destructans 20631-21]
Length = 205
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 150/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F ++ D +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKVFNYGD-VYLGLTGLATDVATVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYEKRFGP+F PV+AGL + PFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPSTFANLVSSSLYEKRFGPFFVSPVVAGLDPKTGIPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+VAGTA + L+G CE +++PD+EP++LFET+SQALL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVAGTASDQLFGTCEGLWEPDLEPEDLFETISQALLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|302501602|ref|XP_003012793.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
gi|291176353|gb|EFE32153.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
Length = 212
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DS
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AK+F+V+GTA + LYG CE++++PD+EP++LFET+SQALL++VDRD LSGWG +
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LKGR D
Sbjct: 194 VYIIEKDKVTKRKLKGRQD 212
>gi|344249174|gb|EGW05278.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 194
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 147/194 (75%), Gaps = 1/194 (0%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
+AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 60
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKE 130
LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D IG
Sbjct: 61 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPM 120
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
+ DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G V+I+
Sbjct: 121 VTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIE 180
Query: 191 PTEIKERILKGRMD 204
+I R LK RMD
Sbjct: 181 KDKITTRTLKARMD 194
>gi|238491746|ref|XP_002377110.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|317146166|ref|XP_001821334.2| proteasome component PUP3 [Aspergillus oryzae RIB40]
gi|220697523|gb|EED53864.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|391869220|gb|EIT78422.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Aspergillus oryzae 3.042]
Length = 206
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 149/201 (74%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVSTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTM 123
++ +Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG+ S KPFIC
Sbjct: 66 DLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA + L+G CE++++PD+ P++LFET+SQALLS+VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQALLSAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 186 AQVYIIEKDKVTKRLLKGRQD 206
>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
Length = 223
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 25 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 84
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPF+C DS
Sbjct: 85 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFVCGFDS 144
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AK+F+V+GTA + LYG CE++++PD+EP++LFET+SQALL++VDRD LSGWG +
Sbjct: 145 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 204
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LKGR D
Sbjct: 205 VYIIEKDKVTKRKLKGRQD 223
>gi|225710324|gb|ACO11008.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
Length = 205
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 151/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA+VAM GK+C AIASD R G L TI TDF + ++ L++GL+GLATD
Sbjct: 1 MSVFTINGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT++Q+L FR K+++LRE R M+P+TF+ ++S+LLYE+RFGP+F P++AG E+KPF
Sbjct: 61 QTVHQKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I MD IGA + +DFV +GT+ ++L G CEA++ DM PDELFE +SQAL++S DRD L
Sbjct: 121 ISGMDLIGASTIPEDFVASGTSEDTLVGMCEALWFEDMSPDELFEAISQALMNSFDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+GWG V+I+ ++ R LK RMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRLKTRMD 205
>gi|171696000|ref|XP_001912924.1| hypothetical protein [Podospora anserina S mat+]
gi|170948242|emb|CAP60406.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 5 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDNVFLGLTGLATDVATVSDL 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DS
Sbjct: 65 FRYKVNMYRLREERQIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGQPFICGFDS 124
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE++++P++ PD+LFET+SQ+LL++VDRD LSGWG H
Sbjct: 125 IGCIDFAKDFIVSGTATEQLFGMCESLWEPNLGPDQLFETISQSLLNAVDRDALSGWGAH 184
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 185 VYIIEKDKVTKRLLKGRQD 203
>gi|407921624|gb|EKG14765.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 150/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I D +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYGD-VYLGLTGLATDVSTVADL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFVSPVIAGINQTTGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFETVSQALL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETVSQALLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|321249095|ref|XP_003191339.1| proteasome subunit beta type 3 [Cryptococcus gattii WM276]
gi|317457806|gb|ADV19552.1| Proteasome subunit beta type 3, putative [Cryptococcus gattii
WM276]
Length = 210
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 151/210 (71%), Gaps = 6/210 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ I+D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------D 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AGL+
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLTTPTPLEP 120
Query: 115 EDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
KP+I TMD+IG KDF VAGTA + LYG E +++PD+EP++LFET+SQ LL++V
Sbjct: 121 HPKPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLNAV 180
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
DRD LSGWG V I+T ++ R L+ RMD
Sbjct: 181 DRDALSGWGAVVNIITHDQVITRTLRARMD 210
>gi|345497131|ref|XP_003427914.1| PREDICTED: proteasome subunit beta type-3-like isoform 2 [Nasonia
vitripennis]
Length = 192
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA+DRR G+Q QTI+ +FQ+I ++ L++GL GLATDSQT+ +RL FR L
Sbjct: 1 MKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDSQTVMERLRFRLNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+L+E R + P+TF S++S LLYE+RFGPYF +P++AGL E +PFIC MD IG L
Sbjct: 61 YELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPETFEPFICNMDLIGCLNLP 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
+DFVV GT E LYG CEA+++P+++ D+LFET+SQAL+++ DRD +SGWG V+I+
Sbjct: 121 EDFVVGGTCSEQLYGMCEALYEPNLDADDLFETISQALVNACDRDAISGWGAIVHIIEKD 180
Query: 193 EIKERILKGRMD 204
+I R +K RMD
Sbjct: 181 KITTRTIKTRMD 192
>gi|307195647|gb|EFN77489.1| Proteasome subunit beta type-3 [Harpegnathos saltator]
Length = 192
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLA+D+QT+ +RL FR L
Sbjct: 1 MKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGSHLYVSLPGLASDTQTVMERLRFRLNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIGAKELA 132
Y+L+E R + P+TF +++S LLYE+RFGPYF +P++AGL +PFIC MD IG++ +A
Sbjct: 61 YELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTSEPFICNMDLIGSRNIA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
+DFVV GT E LYG CE++++PD+ P++LFET+SQAL+++ DRD +SGWG VYI+
Sbjct: 121 EDFVVGGTCTEQLYGMCESLYEPDLGPEDLFETISQALVNAFDRDAISGWGAVVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R +K RMD
Sbjct: 181 KVTKRTIKTRMD 192
>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 201
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 153/200 (76%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG +++AMVGK+C AIA D RLG Q T+A +F+++ + D+++IGL GLA+D+ TL
Sbjct: 2 ELNGGSVIAMVGKDCVAIACDLRLGNQALTVACNFEKVFPVTDKVYIGLPGLASDTVTLR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q+ R +Y+++EER ++PET A LVS+ LY+KRFGPYF +PVIAGL+ +++PFI D
Sbjct: 62 QQFRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVEPVIAGLNSKNEPFIAATD 121
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG AKDFVV+GTA + L+G EA+++P++EP++LFET+SQ+L++++DRD SGWG
Sbjct: 122 LIGCINFAKDFVVSGTASDKLFGMAEALWEPNLEPEDLFETISQSLMNAMDRDAYSGWGA 181
Query: 185 HVYIVTPTEIKERILKGRMD 204
V+I+ +I +R+LK RMD
Sbjct: 182 VVWIIQKDQIIKRVLKSRMD 201
>gi|281344355|gb|EFB19939.1| hypothetical protein PANDA_004975 [Ailuropoda melanoleuca]
Length = 190
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 146/189 (77%), Gaps = 1/189 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 2 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPFI
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +S
Sbjct: 122 CSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVS 181
Query: 181 GWGGHVYIV 189
G G V+I+
Sbjct: 182 GMGVIVHIM 190
>gi|254570058|ref|XP_002492139.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|238031936|emb|CAY69859.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|328351376|emb|CCA37775.1| 20S proteasome subunit beta 3 [Komagataella pastoris CBS 7435]
Length = 205
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 148/199 (74%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q +A +F+++ + +F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCVAIACDLRLGNQSLGVANNFEKVFQFG-HVFLGLTGLATDVITLNET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F+ LY++REERD++PETFA+LVS LYEKRFGPYF P++AG+ S ++PFIC+ DS
Sbjct: 67 FRFKTNLYKMREERDIEPETFANLVSTSLYEKRFGPYFVGPIVAGINSKTNQPFICSFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + +KDF V GTA + LYG CE +++P++ PD+LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDYSKDFAVVGTASDQLYGMCEGLYEPNLSPDDLFETISQALLNANDRDALSGWGAA 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+T +I +R LK R D
Sbjct: 187 VYIITKDKISKRYLKSRQD 205
>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 206
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 148/199 (74%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P T A+LVS+ LYE+RFGP+F PVIAGL + KPFIC DS
Sbjct: 68 FRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLDQKTGKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG H
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 188 VYIIEKDKVTKRLLKGRQD 206
>gi|405117743|gb|AFR92518.1| proteasome subunit beta type 3 [Cryptococcus neoformans var. grubii
H99]
Length = 210
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 6/210 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ ++D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPVNDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------D 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AGL
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 115 EDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
KP+I TMD+IG KDF VAGTA + LYG E +++PD+EP++LFET+SQ LLS+V
Sbjct: 121 HPKPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAV 180
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
DRD LSGWG V I+T ++ R L+ RMD
Sbjct: 181 DRDALSGWGAVVNIITHDKVITRTLRARMD 210
>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 147/204 (72%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+I EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDS
Sbjct: 241 NIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDS 300
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI
Sbjct: 301 QTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFI 360
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
+ D IG + A DF+V+GTA E L G E+ ++ M P+EL E + Q+LLS +DRDCLS
Sbjct: 361 SSFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCLS 420
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG VYI+T E+ + LKGRMD
Sbjct: 421 GWGGVVYILTDKELITKTLKGRMD 444
>gi|46108708|ref|XP_381412.1| hypothetical protein FG01236.1 [Gibberella zeae PH-1]
gi|408398859|gb|EKJ77985.1| hypothetical protein FPSE_01773 [Fusarium pseudograminearum CS3096]
Length = 191
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 146/192 (76%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ DF +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNDFPKIFQYGD-VFLGLTGLATDVNTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREERD+ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG + A
Sbjct: 60 YRLREERDIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++PD+EPD LFET+SQ+LL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|406868327|gb|EKD21364.1| proteasome subunit beta type-3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 212
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 148/199 (74%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I D +++GL+GLATD T+
Sbjct: 15 NGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKIFSYGD-VYLGLTGLATDVSTVSDL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P T A+LVS+ LYEKRFGPYF PV+AG+ + KPFIC DS
Sbjct: 74 FRYKVNMYRLREERNISPSTMANLVSSSLYEKRFGPYFVSPVVAGIDQKSGKPFICGFDS 133
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG H
Sbjct: 134 IGCIDFAKDFIVGGTASDQLFGTCEGLWEPDLAPEDLFETISQALLNAVDRDALSGWGAH 193
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 194 VYIIEKDKVTKRLLKGRQD 212
>gi|451992642|gb|EMD85122.1| hypothetical protein COCHEDRAFT_1149474 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 151/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 DGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG H
Sbjct: 127 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 187 VYIIEKDKVTKRLLKGRQD 205
>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 147/204 (72%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+I EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDS
Sbjct: 241 NIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDS 300
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI
Sbjct: 301 QTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFI 360
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
+ D IG + A DF+V+GTA E L G E+ ++ M P+EL E + Q+LLS +DRDCLS
Sbjct: 361 SSFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCLS 420
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWGG VYI+T E+ + LKGRMD
Sbjct: 421 GWGGVVYILTDKELITKTLKGRMD 444
>gi|448536903|ref|XP_003871223.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380355579|emb|CCG25098.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 245
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F+++ + D+ ++ L+GLATD TL +
Sbjct: 47 NGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKVFEFGDKTYMALTGLATDVITLREL 106
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER ++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 107 FKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPFICGFDS 166
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + + DF+V+GTA + LYG CE +++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 167 IGCIDYSHDFIVSGTATDQLYGMCEGLYEPNLEPEDLFETISQALLNAVDRDALSGWGAV 226
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+T ++ +R+LK R D
Sbjct: 227 VYIITKDKVVKRVLKTRQD 245
>gi|401881470|gb|EJT45770.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
2479]
Length = 207
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 151/206 (73%), Gaps = 6/206 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
EYNG ++VAMVGK+C AIA D RLG Q +A +F+++ ++D L+ GL GLATD TL
Sbjct: 2 EYNGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDVFTLK 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL------SDEDKP 118
+++ FR +Y+++EER++ P TF +L+S+ LYEKRFGPYF +PV+AG+ + +P
Sbjct: 62 EQMRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAPATEANPNPQP 121
Query: 119 FICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
FI TMD+IG KDF VAGTA E LYG E +++P++EP++LFET+SQ LL++VDRD
Sbjct: 122 FISTMDTIGCITTPKDFAVAGTATEKLYGTAEGLWEPNLEPEDLFETISQVLLNAVDRDA 181
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
LSGWG V+I+T ++ R+L+ RMD
Sbjct: 182 LSGWGAVVHIITKDKVVTRMLRSRMD 207
>gi|260946487|ref|XP_002617541.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
gi|238849395|gb|EEQ38859.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
Length = 192
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK C AIA D RLG Q +A +F++I + D+ F+GL+GLATD TL + +H L
Sbjct: 1 MVGKECIAIACDLRLGNQSLGVANNFEKIFQFGDKTFLGLTGLATDVLTLKEDFRLKHNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+LREER+++P T A+LVS+ LYEKRFGPYF P++AGL S +KPFIC D IG + A
Sbjct: 61 YKLREEREIEPRTLANLVSSSLYEKRFGPYFVGPIVAGLESKTNKPFICGFDLIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + LYG CE++++P++EP++LFET+SQALL++VDRD LSGWG VYIVT
Sbjct: 121 KDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAVVYIVTKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LK R D
Sbjct: 181 KVVKRVLKTRQD 192
>gi|58258585|ref|XP_566705.1| proteasome subunit beta type 3 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222842|gb|AAW40886.1| proteasome subunit beta type 3, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 210
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 6/210 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ I+D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------D 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AGL
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 115 EDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
+P+I TMD+IG KDF VAGTA + LYG E +++PD+EP++LFET+SQ LLS+V
Sbjct: 121 HPRPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAV 180
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
DRD LSGWG V I+T ++ R L+ RMD
Sbjct: 181 DRDALSGWGAVVNIITHDKVITRTLRARMD 210
>gi|47223967|emb|CAG06144.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 156/229 (68%), Gaps = 26/229 (11%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + +RL+IGL+GLATD Q
Sbjct: 2 SIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQ 61
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PFI
Sbjct: 62 TVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFI 121
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM----------------------- 157
C++D IG +DFVV+GT E +YG CE++++PDM
Sbjct: 122 CSLDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMVSWTFLRRSDTTMMANGFRPAAS 181
Query: 158 --EPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
E ++LFET+SQA+L++VDRD +SG G V+++ +I R LK RMD
Sbjct: 182 RQEAEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKDKITTRTLKARMD 230
>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
Length = 206
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 149/201 (74%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD ++
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVASVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
L ++ LY+LREER + P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC
Sbjct: 66 DLLRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGMCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
HVYI+ ++ +R+LKGR D
Sbjct: 186 AHVYIIEKDKVTKRLLKGRQD 206
>gi|346320946|gb|EGX90546.1| proteasome component PUP3 [Cordyceps militaris CM01]
gi|400595217|gb|EJP63024.1| proteasome component PUP3 [Beauveria bassiana ARSEF 2860]
Length = 191
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 145/192 (75%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREERD+ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG + A
Sbjct: 60 YRLREERDIAPRTFANLVSSSLYERRFGPYFISPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+VAGTA + L+G CE +++PD+EPD LFET+SQALL +VDRD LSGWG HVYI+
Sbjct: 120 KDFIVAGTASDQLFGMCEGLYEPDLEPDALFETISQALLCAVDRDALSGWGAHVYIIEKG 179
Query: 193 EIKERILKGRMD 204
+I +R+LKGR D
Sbjct: 180 KITKRLLKGRQD 191
>gi|164660346|ref|XP_001731296.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
gi|159105196|gb|EDP44082.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
Length = 201
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 149/200 (74%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
EYNG +++AM GKNC AIASD RLG Q ++T F ++ ++ DR ++GL GLATD TL
Sbjct: 2 EYNGGSVIAMTGKNCVAIASDLRLGNQALLLSTQFDKVFRMTDRTYVGLPGLATDVATLR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ +R +Y+++E+RD++PETFA L+S+ LYE+RFGPYF +PV+AG++ ++PFI D
Sbjct: 62 EKFRYRLNMYRMKEDRDIEPETFAKLMSSTLYERRFGPYFIEPVVAGMNSNNEPFIAASD 121
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG AKDFVV+GTA + L+G E +++PD+EP++LFET+SQ +L ++RD LSG G
Sbjct: 122 LIGCLNFAKDFVVSGTASDRLFGMAEGLWEPDLEPEDLFETISQTMLGGIERDALSGMGV 181
Query: 185 HVYIVTPTEIKERILKGRMD 204
V I+TP ++ ER LK RMD
Sbjct: 182 IVRIITPDKVIERTLKCRMD 201
>gi|320164183|gb|EFW41082.1| proteasome subunit beta type-3 [Capsaspora owczarzaki ATCC 30864]
Length = 192
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK C AIA+DRR G+Q QT++TDFQ+ K+ DRLFIGL+GLATD QT+ +L FR +
Sbjct: 1 MKGKGCVAIAADRRFGIQAQTVSTDFQKTFKMGDRLFIGLAGLATDVQTVASKLQFRVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIGAKELA 132
Y LREER + PETF ++V+ +LYEKRFGP+F +PVIAGL +PF+ D IG ++A
Sbjct: 61 YHLREERSVAPETFMNIVANVLYEKRFGPFFIEPVIAGLDPVSGEPFVAATDLIGCPDVA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
DF V GTA E LYG CE+M++P++EP++LFE VSQ L++ DRD +SGWG V+I+
Sbjct: 121 DDFAVVGTASEQLYGMCESMYEPNLEPEDLFEVVSQCLMNGCDRDAISGWGAVVHIIEKD 180
Query: 193 EIKERILKGRMD 204
++ R LK RMD
Sbjct: 181 KVTTRTLKARMD 192
>gi|212537585|ref|XP_002148948.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068690|gb|EEA22781.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 206
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++G++GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
++ +Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA + L+G CE +++PD+ PD+LFET+SQALL++VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
+VYI+ ++ +R+LKGR D
Sbjct: 186 ANVYIIEKDKVTKRLLKGRQD 206
>gi|452980318|gb|EME80079.1| hypothetical protein MYCFIDRAFT_189753 [Pseudocercospora fijiensis
CIRAD86]
Length = 192
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+ + ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYSQSTFLGLTGLATDVSTVSELFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P+TFA+LVS+ LYE+RFGP+F PV+AG++ KPFIC DSIG + A
Sbjct: 61 YRLREEREISPQTFANLVSSSLYERRFGPWFVSPVVAGINQTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PD+EP++LFET+SQALLS+VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLEPEDLFETMSQALLSAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|442750507|gb|JAA67413.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Ixodes ricinus]
Length = 205
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK C AIA+DRRLG + TIA DFQRI ++ +L+ GLSGLATD
Sbjct: 1 MSIMSYNGGVVIAMKGKECIAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR +Y+LRE R +KP+TF+S+VS +LYE+RFGPYF + +IAGL ++P+
Sbjct: 61 QTVAQRLKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYFTEALIAGLDPITNEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I + D IG +DFVV+GT E +G CEA+++PD+ PDELFE +SQAL+++ DRD
Sbjct: 121 IASTDLIGCISEPEDFVVSGTCEEQCFGMCEALWEPDLGPDELFEVISQALVNAFDRDAS 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWGG V+IV ++ + LK RMD
Sbjct: 181 SGWGGVVHIVEKDKVTTKYLKTRMD 205
>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
Length = 206
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 150/199 (75%), Gaps = 1/199 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK C AIASD RLG Q ++ +F++I +I + ++GL+GLA+D TL +
Sbjct: 8 NGGAAVAMIGKECIAIASDLRLGQQSLGVSNNFEKIFEISPKTYLGLTGLASDVLTLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F+ LY+LRE+ ++P T A+L+S+ LYE+RFGP+F P++AGL S +KPFIC DS
Sbjct: 68 FRFKTNLYKLREDHSIEPSTLANLISSSLYERRFGPWFVSPIVAGLDSKTNKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + + DF+V+GTA + LYG CE++++P++EP+ELFET+SQALL++VDRD LSGWG
Sbjct: 128 IGCIDYSHDFIVSGTASDQLYGMCESLYEPNLEPEELFETISQALLNAVDRDALSGWGAV 187
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+T ++ +R+LK R D
Sbjct: 188 VYIITKDKVTKRVLKTRQD 206
>gi|367018856|ref|XP_003658713.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
gi|347005980|gb|AEO53468.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
Length = 192
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVSTVADLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P TFA+LVS LYE+RFGPYF PV+AGL + PFIC DSIG + A
Sbjct: 61 YRLREERHIAPRTFANLVSTTLYERRFGPYFVNPVVAGLEPKTGAPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E LYG CE ++P++ PDELFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTATEQLYGMCENFWEPNLGPDELFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|345567463|gb|EGX50395.1| hypothetical protein AOL_s00076g159 [Arthrobotrys oligospora ATCC
24927]
Length = 205
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 150/199 (75%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A +AM GK+C AIA D RLG Q T++ +F +I D +F+GL+GLATD QT++
Sbjct: 8 NGGACLAMAGKDCVAIACDLRLGQQALTLSNNFPKIFNYGD-VFLGLTGLATDVQTMHSL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ LY+LREER+++PET A+LVS+ LYE+RFGPYF PV+AG++ KPFIC DS
Sbjct: 67 FRYKVNLYRLREEREIEPETMANLVSSSLYERRFGPYFVSPVVAGINQRTGKPFICGFDS 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G E +++PD+EP++LFETVSQ LL+S+DRD L+GWG H
Sbjct: 127 IGCIDFAKDFIVSGTASDQLFGVAEGLWEPDLEPEDLFETVSQTLLNSLDRDALAGWGAH 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+T ++ +R+L+ R D
Sbjct: 187 VYIITKDKVTKRLLRTRQD 205
>gi|406603265|emb|CCH45193.1| Proteasome component [Wickerhamomyces ciferrii]
Length = 210
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 151/198 (76%), Gaps = 2/198 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G ++VAMVGK+C AIASD RLG Q ++ F+++ + +++GL+GLATD+ TL +
Sbjct: 14 GGSVVAMVGKDCVAIASDLRLGNQSLGLSNKFEKVYN-YGHVYLGLTGLATDAITLSEVF 72
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSI 126
++ LY+LREER ++PE+FA+LVS+ LYEKRFGPYF PV+AG+ S KPFIC D I
Sbjct: 73 RYKTNLYKLREERQIEPESFANLVSSTLYEKRFGPYFIGPVVAGINSITSKPFICGFDLI 132
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + AKDF+V+GTA + LYG CE++++PD+EP++LFET+SQALL++ DRD LSGWGG V
Sbjct: 133 GCIDFAKDFIVSGTATDQLYGMCESLYEPDLEPEDLFETISQALLNAADRDALSGWGGVV 192
Query: 187 YIVTPTEIKERILKGRMD 204
YI+T ++ +R LK R D
Sbjct: 193 YIITKDKVVKRYLKSRQD 210
>gi|242808757|ref|XP_002485230.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
gi|218715855|gb|EED15277.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
Length = 206
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 148/201 (73%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVTTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
++ +Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
DSIG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWG 185
Query: 184 GHVYIVTPTEIKERILKGRMD 204
+VYI+ ++ +R+LKGR D
Sbjct: 186 ANVYIIEKDKVTKRLLKGRQD 206
>gi|225719470|gb|ACO15581.1| Proteasome subunit beta type-3 [Caligus clemensi]
Length = 205
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA+VAM GK+C IASD R G TI TDF + ++ L++GL+GLATD
Sbjct: 1 MSVFSINGSAVVAMKGKDCVGIASDLRFGSDRHTIMTDFPKTFEMGAGLYVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT++Q+L FR K+++LRE R M+P+TF+ ++S+LLYE+RFGP+F PV+AG E+KPF
Sbjct: 61 QTVHQKLNFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPVVAGWDFVENKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I +MD IGA + KDFV GT+ SL G CEA++ DM DELFE +SQAL++S DRD L
Sbjct: 121 ISSMDLIGAMTVPKDFVAVGTSENSLMGMCEALWFEDMNKDELFEAISQALMNSFDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+GWG V+I+ ++ R LK RMD
Sbjct: 181 AGWGAEVHIIEKNQVTTRRLKTRMD 205
>gi|302411392|ref|XP_003003529.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
gi|261357434|gb|EEY19862.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
Length = 191
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 147/192 (76%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDLFRYKSNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG + A
Sbjct: 60 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE++++PD+ PDELFET+SQ+LL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASEQLFGMCESLWEPDLGPDELFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 202
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/201 (53%), Positives = 145/201 (72%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDSQTL
Sbjct: 2 EYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQTL 61
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI +
Sbjct: 62 SQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFISSF 121
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D IG + A DF+V+GTA E L G E+ ++ M P+EL E + Q+LLS +DRDCLSGWG
Sbjct: 122 DLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCLSGWG 181
Query: 184 GHVYIVTPTEIKERILKGRMD 204
G VYI+T E+ + LKGRMD
Sbjct: 182 GMVYILTDKELITKTLKGRMD 202
>gi|342890397|gb|EGU89215.1| hypothetical protein FOXB_00168 [Fusarium oxysporum Fo5176]
Length = 191
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 145/192 (75%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVNTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG + A
Sbjct: 60 YRLREERSIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++PD+EPD LFET+SQ+LL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|440463429|gb|ELQ33009.1| proteasome component PUP3 [Magnaporthe oryzae Y34]
gi|440481325|gb|ELQ61924.1| proteasome component PUP3 [Magnaporthe oryzae P131]
Length = 192
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVATVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + PFIC DSIG + A
Sbjct: 61 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE++++PD+ P++LFET+SQALLS+VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTASEQLFGMCESLWEPDLGPEDLFETISQALLSAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|449690724|ref|XP_002160822.2| PREDICTED: proteasome subunit beta type-3-like, partial [Hydra
magnipapillata]
Length = 196
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 146/195 (74%), Gaps = 1/195 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSALVAM GKNC AIA+DRR GVQ QTIA DF++ ++ D+LF+GLSGLATD
Sbjct: 1 MSVMSINGSALVAMKGKNCVAIAADRRYGVQFQTIACDFEKTFQMGDKLFLGLSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT+ F+ LY+LRE R + P+ F +++S +LY +RFGPYF +P+IAGL + ++P+
Sbjct: 61 QTVNCFFFFKTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I + D IG +DFVV+GT G+ LYG CE++++PD+EP+ LFE +SQALL++ DRDCL
Sbjct: 121 IASCDLIGCPCEPEDFVVSGTCGDQLYGMCESLWEPDLEPEALFEVISQALLNAQDRDCL 180
Query: 180 SGWGGHVYIVTPTEI 194
SGWG V+I+ P +
Sbjct: 181 SGWGAVVHIIDPIRL 195
>gi|240849169|ref|NP_001155482.1| proteasome beta 3 subunit-like [Acyrthosiphon pisum]
gi|239792821|dbj|BAH72708.1| ACYPI002587 [Acyrthosiphon pisum]
Length = 205
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG AL+ M GK+C AIA+D+R G+Q QT++ DF ++ +I+ F+G GLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTFMGFPGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+Y++++FR +LY+L+E R + P+ ASLVS LLYE RF P+F +P+I L + +P+
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IG + +FVV GT+ LYG CEA+++PDME D+LFET+SQAL+S+ +RD +
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I R +K RMD
Sbjct: 181 SGWGAKVYIIKKDKIIVRDIKTRMD 205
>gi|367052597|ref|XP_003656677.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
gi|347003942|gb|AEO70341.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
Length = 192
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ L
Sbjct: 1 MAGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVATVADLFRYKVNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DSIG + A
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLDPKTGQPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE++++PD+ PDELFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTASDQLFGMCESLWEPDLGPDELFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|340520586|gb|EGR50822.1| 20S proteasome, beta subunit [Trichoderma reesei QM6a]
Length = 191
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 144/192 (75%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + PFIC DSIG + A
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGAPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++PD+EPD LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
occidentalis]
Length = 205
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM G C AIA+DRRLGV+ +T++ DF+R+ ++ RLF+GL GLATD+
Sbjct: 1 MSILAYNGGIVIAMKGDGCVAIATDRRLGVEGRTVSIDFERVFEMGPRLFVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
T+ Q+L F LY+L+E R M P+TFA+L+S LYEKRFGPYF +PV+AG+ + ++P+
Sbjct: 61 ITVSQKLRFDMNLYELQENRQMTPKTFATLLSGTLYEKRFGPYFIEPVVAGMDPKTNEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG+ DFVV+GTA E YG CE +++P M+PDELFE +SQ +L+++DRD +
Sbjct: 121 VACMDLIGSTTETVDFVVSGTAEEEAYGMCETLWRPGMKPDELFECISQCVLNAMDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++ ++ R LK RMD
Sbjct: 181 SGWGVKVHVMEKDKVTTRYLKTRMD 205
>gi|148679117|gb|EDL11064.1| mCG13639 [Mus musculus]
Length = 205
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM KNC AIA+DRR G+Q Q + TDFQ+I + DRL++GL+GLA D
Sbjct: 1 MSIMSYNGGAVMAMKEKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYVGLAGLAIDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL F LY+L+E +KP T S+V+ LLYEK FGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFLLNLYELKEGWQIKPYTLMSMVANLLYEKWFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +Y CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEPMYRMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK MD
Sbjct: 181 SGMGVIVHVIEKDKITTRTLKALMD 205
>gi|355714019|gb|AES04862.1| proteasome subunit beta type 3 [Mustela putorius furo]
Length = 180
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180
>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
Length = 192
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 144/192 (75%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ L F+ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P+T A+LVS+ LYEKRFGPYF PV+AG+++ +PFIC DSIG + A
Sbjct: 61 YRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
Length = 203
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Query: 12 VAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
VAMVGK+C AIASD RLG+ Q QT A D+ ++ KIHD+L++GL+GL D TL Q+L F+
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 130
H +Y+LRE R M P+ FAS+VS LYEKRF PY+ +PV+AGL + KP+I +MD IGA
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLIGADA 129
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
A DFVVAG ESL+G CE+ ++ D+EPDELF + L + V+RDCLSGWGG V ++T
Sbjct: 130 SADDFVVAGDNVESLFGVCESFYRKDLEPDELFNVIGNCLNAGVNRDCLSGWGGIVTLIT 189
Query: 191 PTEIKERILKGRMD 204
R LK RMD
Sbjct: 190 KDGPITRTLKNRMD 203
>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 139/200 (69%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG ++V M G NC IASD R G QL TI+TDF +I KI D++FIGLSGLATD QT+
Sbjct: 4 QYNGGSIVGMSGDNCVCIASDNRYGQQLHTISTDFPKIFKITDKIFIGLSGLATDIQTVL 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ ++ +Y+LRE R M P+ F ++VS LLYE+RFGP+F +PVI L+D+ +C MD
Sbjct: 64 NKIKYKVNMYELRENRKMSPKCFKTMVSNLLYERRFGPFFAEPVIVALNDDGTTMLCGMD 123
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
+GA E KD+VVAGTA ++G EA ++PDM +ELFE VSQ +LS DR+ SGWG
Sbjct: 124 CLGAAESPKDYVVAGTAANEMHGLAEAYWRPDMPAEELFECVSQTMLSGCDRNAASGWGA 183
Query: 185 HVYIVTPTEIKERILKGRMD 204
V IV +I R LK RMD
Sbjct: 184 TVTIVQKDKIITRKLKARMD 203
>gi|328715258|ref|XP_001950836.2| PREDICTED: proteasome subunit beta type-3-like [Acyrthosiphon
pisum]
Length = 205
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG AL+ M GK+C AIA+D+R G+Q QT++ DF ++ +I+ ++G GLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+Y++++FR +LY+L+E R + P+ ASLVS LLYE RF P+F +P+I L + +P+
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IG + +FVV GT+ LYG CEA+++PDME D+LFET+SQAL+S+ +RD +
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VYI+ +I R +K RMD
Sbjct: 181 SGWGAKVYIIKKDKIIVRDIKTRMD 205
>gi|378725424|gb|EHY51883.1| proteasome component PUP3 [Exophiala dermatitidis NIH/UT8656]
Length = 192
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD QT+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFTYGPSVYLGLTGLATDVQTVSDTFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG++ KPFIC DSIG + A
Sbjct: 61 YRLREERNISPQTLANLVSSSLYERRFGPWFVSPVLAGINHTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+VAGTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVAGTASDQLFGTCEGLWEPDLSPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|429858056|gb|ELA32890.1| proteasome component pup3 [Colletotrichum gloeosporioides Nara gc5]
Length = 191
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 147/192 (76%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG + A
Sbjct: 60 YRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE++++PD+ P+ELFET+SQ+LL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASEQLFGMCESLWEPDLGPEELFETISQSLLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|116181896|ref|XP_001220797.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185873|gb|EAQ93341.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 192
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F ++ + + +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKVFQYGENVFLGLTGLATDVSTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDSIGAKELA 132
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL PFIC DSIG + A
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPTTGAPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE++++PDM PD LFET+SQ+LL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTATEQLFGMCESLWEPDMGPDALFETISQSLLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|350536231|ref|NP_001232468.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128389|gb|ACH44887.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128390|gb|ACH44888.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM G+ C AIA+DRR G+Q QT++TD QRI + RL +GL+GLATD
Sbjct: 1 MSILAYNGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q++ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QSVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFV++GT E +YG CE++++PDMEP+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTQDFVLSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|330925823|ref|XP_003301210.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
gi|311324271|gb|EFQ90697.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
Length = 191
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 146/192 (76%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DSIG + A
Sbjct: 60 YRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|154279074|ref|XP_001540350.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|150412293|gb|EDN07680.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|225562334|gb|EEH10613.1| proteasome component PUP3 [Ajellomyces capsulatus G186AR]
Length = 192
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD ++ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+LREER + P+T A+L+S+ LYEKRFGPYF PV+AG+ S KPFIC DSIG + A
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PD+ PD+LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|123449540|ref|XP_001313488.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121895373|gb|EAY00559.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 206
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I+ YNGS ++AM G +C AIASDRRLGV + T++ DF+RI +I+DR+++GL+GLATD T
Sbjct: 4 ISTYNGSCVLAMAGDHCVAIASDRRLGVNMLTVSKDFKRIFQINDRIYLGLAGLATDVLT 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFIC 121
+ ++L F L +LREER + P+ F +LV + LYEKRF P+F PVIAGL E ++P++
Sbjct: 64 VREQLRFDVNLLELREERPIDPKKFMNLVKSTLYEKRFSPFFVTPVIAGLLPETNEPYLA 123
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
DSIGA KDF VAGT ESLYG CE+ ++P+M PDELFE ++ L+++V+RD +SG
Sbjct: 124 ASDSIGAFAFPKDFAVAGTCEESLYGICESAWRPNMNPDELFECTAKCLIAAVERDSISG 183
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WGG VYI+T ++ + +K RMD
Sbjct: 184 WGGIVYIITQDKVIIKEIKTRMD 206
>gi|146323725|ref|XP_752084.2| proteasome component Pup3 [Aspergillus fumigatus Af293]
gi|129557567|gb|EAL90046.2| proteasome component Pup3, putative [Aspergillus fumigatus Af293]
gi|159125002|gb|EDP50119.1| proteasome component Pup3, putative [Aspergillus fumigatus A1163]
Length = 192
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PVIAG+ S KPFIC DSIG + A
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++PD+ P++LFET+SQALLS+VDRD LSGWG VYI+
Sbjct: 121 KDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
Length = 206
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 145/203 (71%), Gaps = 1/203 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
IT YNG A+VAM+G+ C AIA D+RLG+ Q T++++F + K+ + F SGLATD Q
Sbjct: 4 ITSYNGGAVVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TL + ++F+ +Y+LR +++M +T +++V A+LY +RFGP+F VIAGL ++ P+I
Sbjct: 64 TLKEEIMFKVNMYKLRGDKEMSVKTLSNMVGAMLYSRRFGPWFVDSVIAGLDNDSSPYIT 123
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
D +GA DFVVAGT E LYG CEA+FKP M+P++LFETVSQ L++ +DRDCLSG
Sbjct: 124 CFDLVGAPCTPSDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLSG 183
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WG V+++TP + R LK RMD
Sbjct: 184 WGAEVHVITPDRVISRSLKTRMD 206
>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 192
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ L F+ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P+T A+L S+ LYEKRFGPYF PV+AG+ + KPFIC DSIG + A
Sbjct: 61 YRLREERHISPKTLANLTSSTLYEKRFGPYFVSPVLAGIDNTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
+DF+V+GTA + L+G CE +++PD+ PD+LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 121 QDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
Length = 212
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P T A+LVS+ LYE+RFGP+F PV+AGL + KPFIC DS
Sbjct: 68 FRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDS 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDM------EPDELFETVSQALLSSVDRDCL 179
IG + AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD L
Sbjct: 128 IGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGPEDLFETISQALLNAVDRDAL 187
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG HVYI+ ++ +R+LKGR D
Sbjct: 188 SGWGAHVYIIEKDKVTKRLLKGRQD 212
>gi|325092329|gb|EGC45639.1| proteasome component [Ajellomyces capsulatus H88]
Length = 192
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ F +I ++GL+GLATD ++ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+LREER + P+T A+L+S+ LYEKRFGPYF PV+AG+ S KPFIC DSIG + A
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PD+ PD+LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|385301682|gb|EIF45855.1| proteasome component pup3 [Dekkera bruxellensis AWRI1499]
Length = 206
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 154/202 (76%), Gaps = 2/202 (0%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
+ YNG + VAMVGK+C AIASD RLG Q ++ DF++I + +F+GL+GLATD ++
Sbjct: 6 STYNGGSAVAMVGKDCVAIASDLRLGQQSLGLSNDFEKIFH-YGHVFLGLTGLATDVMSV 64
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICT 122
++ L + LY+++E+R+++P +FA+L+S+ LY++RFGP+F P++AGL S KPFIC
Sbjct: 65 HEDLRKKTNLYKMKEQREIEPXSFANLISSSLYKRRFGPWFVGPIVAGLNSHSGKPFICG 124
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
D IG + AKDF+VAGTA E L+G CE++++P++EP++LFET+SQALL++VDRD LSGW
Sbjct: 125 FDYIGCIDFAKDFIVAGTASEQLFGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGW 184
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G VY++T ++ +R LK R D
Sbjct: 185 GAVVYVITKDKVVKRFLKTRQD 206
>gi|322701542|gb|EFY93291.1| proteasome component PUP3 [Metarhizium acridum CQMa 102]
Length = 191
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 143/192 (74%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVADLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG + A
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++ DM PD LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEEDMGPDALFETISQALLNAVDRDALSGWGAHVYIIEKN 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|336261120|ref|XP_003345351.1| hypothetical protein SMAC_04582 [Sordaria macrospora k-hell]
gi|380090602|emb|CCC11597.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 191
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 148/192 (77%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIGAKELA 132
Y+LREER++ P+TFA+LVS+ LYE+RFGPYF PV+AGL + +PFIC DSIG + A
Sbjct: 60 YRLREERNIAPKTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSEPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE++++P++ P++LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTATEQLFGMCESLWEPNLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|340506918|gb|EGR32962.1| hypothetical protein IMG5_065490 [Ichthyophthirius multifiliis]
Length = 220
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 145/213 (68%), Gaps = 15/213 (7%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL- 63
EYNG A++ M G C AI+ DRRLG Q QT+A +FQ++ KI D + +GL+GLATD QTL
Sbjct: 6 EYNGGAMIGMKGNGCVAISCDRRLGAQFQTVACNFQKVFKIQDNILLGLTGLATDVQTLQ 65
Query: 64 --------------YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVI 109
++++ F+ LY+LRE RDMK ETF +L+SA LYEKR+GPYF QP++
Sbjct: 66 IKKNIQILNQFLKSHRQMEFKVNLYRLRENRDMKVETFINLISAALYEKRWGPYFVQPIV 125
Query: 110 AGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQA 169
GL D P + + DSIG ++F V GTAG+ L G+CE+M++ D+ P++L + V+QA
Sbjct: 126 IGLEDGKTPMVASYDSIGCTSTNENFQVGGTAGDGLIGSCESMWRDDLTPEQLEDVVAQA 185
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGR 202
LL+ DRD LSGWGG VY++T +I ++LK +
Sbjct: 186 LLAGADRDILSGWGGIVYVITKDKITVKVLKSK 218
>gi|239788580|dbj|BAH70963.1| ACYPI007526 [Acyrthosiphon pisum]
Length = 205
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 147/204 (72%), Gaps = 1/204 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG AL+ M GK+C AIA+D+R G+Q QT++ DF ++ +I+ ++G GLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+Y++++FR +LY+L+E R + P+ ASLVS LLYE RF P+F +P+I L + +P+
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IG + +FVV GT+ LYG CEA+++PDME D+LFET+SQAL+S+ +RD +
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRM 203
SGWG VYI+ +I R +K RM
Sbjct: 181 SGWGAKVYIIKKDKIIVRDIKTRM 204
>gi|256070135|ref|XP_002571401.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646867|emb|CCD58588.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 205
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++AM GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE + +KP+T +++S LLYE+RFGPYF +PVIAG+ +KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG A DFVV+GT E +YG CE +++ +M ELFE +SQ +L++++RD +
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAV 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY++ + LK RMD
Sbjct: 181 SGWGARVYLLEKDAVTISDLKMRMD 205
>gi|226478588|emb|CAX72789.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|226478710|emb|CAX72850.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|257206170|emb|CAX82736.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG A DFVV+GT E +YG CE +++ +M+ ELFE +SQ +L++++RD +
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY++ + LK RMD
Sbjct: 181 SGWGARVYLIEKDAVTISDLKMRMD 205
>gi|71003984|ref|XP_756658.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
gi|46095730|gb|EAK80963.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
Length = 189
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 142/189 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ ++GL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL +R +R +Y+++EERD++PE FA+LVS+ LYE+RFGPYF +PVIAG++ +D+PFI
Sbjct: 61 ATLKERFRYRVNMYKMKEERDIEPEIFANLVSSTLYERRFGPYFIEPVIAGINSKDEPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D +G AKDFVV+GTA + L+G E +++PD+ P+ELFETVSQ LL +++RD LS
Sbjct: 121 AASDVVGCLNFAKDFVVSGTASDKLFGMAEGLWEPDLGPEELFETVSQILLGALERDALS 180
Query: 181 GWGGHVYIV 189
GWG V I+
Sbjct: 181 GWGAVVRIM 189
>gi|388583046|gb|EIM23349.1| N-terminal nucleophile aminohydrolase [Wallemia sebi CBS 633.66]
Length = 205
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM GK C AIA D RLG + ++A +F+++ I +LF+GL GLA+D
Sbjct: 1 MSIMEYNGGSVVAMRGKKCVAIAGDLRLGNRNMSLAANFEKVFPITQKLFVGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
TL FR +Y+L+E R+++P TFA LVS+ LYE+R+ PYF +PV+AGL + +PF
Sbjct: 61 LTLRDTFRFRTNMYKLKEGREIEPNTFAHLVSSTLYERRWSPYFVEPVVAGLDPNNGEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I D IG AKDFVV+GTA + ++G E++++PD+E ++LFET+SQ LL+ VDRD L
Sbjct: 121 IAATDLIGCLNFAKDFVVSGTASDKMFGMAESLWEPDLEAEDLFETISQTLLNGVDRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++TP ++ R LK RMD
Sbjct: 181 SGWGAVVHVITPEKMITRSLKSRMD 205
>gi|322705678|gb|EFY97262.1| proteasome component PUP3 [Metarhizium anisopliae ARSEF 23]
Length = 191
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 143/192 (74%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVGTVADLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIGAKELA 132
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG + A
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++ DM PD LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTASEQLFGMCEGLWEEDMGPDALFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|225713992|gb|ACO12842.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
gi|290463059|gb|ADD24577.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
Length = 205
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA++AM G +C +IASD R G+ T+ TDF + ++ LF+GL+GLATD
Sbjct: 1 MSVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTFEMGPGLFVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT+ Q+L FR K+++LRE R M+P TF++++S LLYE+RFGP+F P++AG E+KPF
Sbjct: 61 QTVQQKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I +MD IGA + +DFV AGT+ +SL G CEA++ +M P+ELFE SQA+++S DRD L
Sbjct: 121 ISSMDLIGAITIPEDFVAAGTSEDSLMGMCEALWFENMNPEELFEATSQAIMNSFDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+GWG V+I+ ++ R +K RMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRIKTRMD 205
>gi|258566702|ref|XP_002584095.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
gi|237905541|gb|EEP79942.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
Length = 192
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD ++ + ++ L
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLMRYKVNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DSIG + A
Sbjct: 61 YRLREERQISPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PD+ P+ELFETVSQALL++VDRD LSGWG HVYI+
Sbjct: 121 KDFIVSGTASDQLFGMCEGLWEPDLGPEELFETVSQALLNAVDRDALSGWGAHVYIIEKD 180
Query: 193 EIKERILKGRMD 204
+ +R+LKGR D
Sbjct: 181 RVTKRLLKGRQD 192
>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
Length = 220
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 143/203 (70%), Gaps = 1/203 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
IT YNG ALVAM+G+ C AIA D+RLG+ Q T++++F + K+ + F SGLATD Q
Sbjct: 18 ITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQ 77
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TL ++F+ +Y+LR +++M +T +++V ++LY +RFGP+F VIAGL + P+I
Sbjct: 78 TLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYIT 137
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
D +GA DFVVAGT E LYG CEA+FKP M+P++LFETVSQ L++ +DRDCLSG
Sbjct: 138 CFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLSG 197
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WG V+++TP + R LK RMD
Sbjct: 198 WGAEVHVITPDRVISRSLKTRMD 220
>gi|164427141|ref|XP_964481.2| proteasome component PUP3 [Neurospora crassa OR74A]
gi|157071624|gb|EAA35245.2| proteasome component PUP3 [Neurospora crassa OR74A]
Length = 191
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 146/192 (76%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + +PFIC DSIG + A
Sbjct: 60 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGEPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE +++P++ P++LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 120 KDFIVSGTATEQLFGMCENLWEPNLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 180 KVTKRLLKGRQD 191
>gi|197128391|gb|ACH44889.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI NG A++AM G+ C AIA+DRR G+Q QT++TD QRI + RL +GL+GLATD
Sbjct: 1 MSILACNGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q++ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QSVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + +DFV++GT E +YG CE++++PDMEP+ LFET+SQA+L++VDRD +
Sbjct: 121 ICSLDLIGCPMVTQDFVLSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G V+++ +I R LK RMD
Sbjct: 181 SGMGVVVHVIEKDKITTRTLKARMD 205
>gi|119501054|ref|XP_001267284.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
gi|119415449|gb|EAW25387.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
Length = 192
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PVIAG+ S KPFIC DSIG + A
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PD+ P++LFET+SQALLS+VDRD LSGWG VYI+
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I EYNG ++V M GKNC A+A DRR G Q+ TI T++Q++ KI D + + LSGL +D T
Sbjct: 4 IFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHT 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
Y + LY L+E R MKP TFA+LV++ LYE+RFGP+F P++AGL + KP + T
Sbjct: 64 FYALMEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVTPIVAGL-ENGKPILAT 122
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
DSIG K DF V GT G +YGACEA FKPD+ P+EL E + Q+L+S DRD LSGW
Sbjct: 123 YDSIGCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSLVSGCDRDSLSGW 182
Query: 183 GGHVYIVTPTEIKERILKGR 202
GG VY++T ++ +ILK +
Sbjct: 183 GGVVYVLTEQKLTVKILKTK 202
>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I EYNG ++V M GKNC A+A DRR G Q+ TI T++Q++ KI D + + LSGL +D T
Sbjct: 4 IFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHT 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
Y + LY L+E R MKP TFA+LV++ LYE+RFGP+F P++AGL + KP + T
Sbjct: 64 FYALMEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVTPIVAGL-ENGKPILAT 122
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
DSIG K DF V GT G +YGACEA FKPD+ P+EL E + Q+L+S DRD LSGW
Sbjct: 123 YDSIGCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSLVSGCDRDSLSGW 182
Query: 183 GGHVYIVTPTEIKERILKGR 202
GG VY++T ++ +ILK +
Sbjct: 183 GGVVYVLTEQKLTVKILKTK 202
>gi|226478644|emb|CAX72817.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
Q ++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QIVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG A DFVV+GT E +YG CE +++ +M+ ELFE +SQ +L++++RD +
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY++ + LK RMD
Sbjct: 181 SGWGARVYLIEKDAVTISDLKMRMD 205
>gi|115398103|ref|XP_001214643.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
gi|114192834|gb|EAU34534.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
Length = 192
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVSTVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDSIGAKELA 132
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG++ KPFIC DSIG + A
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINYTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE++++ D+ P++LFET+SQA+LS+VDRD LSGWG VYI+
Sbjct: 121 KDFIVSGTASEQLFGTCESLYEQDLSPEDLFETISQAMLSAVDRDALSGWGAQVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|403223804|dbj|BAM41934.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 206
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
IT YNG A+VAM+G+ C AIA D+RLG Q T+ ++F + K+ D F SGLATD Q
Sbjct: 4 ITYYNGGAVVAMMGEGCVAIACDKRLGFNQQITVGSNFPKAFKVTDNCFFAASGLATDIQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TL ++F+ +YQ+R E+ M +T +++V +LY KRFGP+F VIAGL +++P+I
Sbjct: 64 TLKDEIMFKVNMYQMRGEKQMNVKTLSNMVGTMLYSKRFGPWFVDSVIAGLDSKNEPYIT 123
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
D +GA DFVV GT E LYG CEA+F+P + DELFET+SQ L++ +DRDCLSG
Sbjct: 124 CFDLVGAPCTPTDFVVVGTCSEQLYGVCEALFRPGLNADELFETISQCLMAGIDRDCLSG 183
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WG V+++TP ++ R LK RMD
Sbjct: 184 WGAEVHVITPDKVVSRSLKTRMD 206
>gi|212537587|ref|XP_002148949.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068691|gb|EEA22782.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 192
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++G++GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DSIG + A
Sbjct: 61 YRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PD+ PD+LFET+SQALL++VDRD LSGWG +VYI+
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGANVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTKRLLKGRQD 192
>gi|67528502|ref|XP_662053.1| hypothetical protein AN4449.2 [Aspergillus nidulans FGSC A4]
gi|40741024|gb|EAA60214.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259482734|tpe|CBF77496.1| TPA: proteasome component Pup3, putative (AFU_orthologue;
AFUA_4G07420) [Aspergillus nidulans FGSC A4]
Length = 192
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ + +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPGTYLGLTGLATDVSTVSDLFRLKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER + P+T A+LVS+ LYE+RFG YF PVIAG+++ KPFIC DSIG + A
Sbjct: 61 YRLREERHIAPQTLANLVSSTLYERRFGAYFVSPVIAGINNTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE +++PDM P++LFET+SQALLS+VDRD LSGWG VYI+
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDMSPEDLFETISQALLSAVDRDALSGWGAQVYIIEKD 180
Query: 193 EIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 181 KVTQRLLKGRQD 192
>gi|169602118|ref|XP_001794481.1| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
gi|160706087|gb|EAT89142.2| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
Length = 195
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 146/196 (74%), Gaps = 6/196 (3%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTISNNFPKIFQYGD-VFLGLTGLATDVATVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DSIG + A
Sbjct: 60 YRLREERNISPQTMANLVSSSLYEKRFGPYFVSPVIAGINQTTGKPFICGFDSIGCIDFA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDM----EPDELFETVSQALLSSVDRDCLSGWGGHVYI 188
KDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG HVYI
Sbjct: 120 KDFIVSGTASDQLFGTCEGLWEPDLVSSQGPEDLFETISQALLNAVDRDALSGWGAHVYI 179
Query: 189 VTPTEIKERILKGRMD 204
+ ++ +R+LKGR D
Sbjct: 180 IEKDKVTKRLLKGRQD 195
>gi|358057136|dbj|GAA97043.1| hypothetical protein E5Q_03718 [Mixia osmundae IAM 14324]
Length = 204
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 143/204 (70%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS E NG +++AM+GK+C AIA D RLG Q T+A + ++I I ++GL GLA+D+
Sbjct: 1 MSAMEINGGSVIAMLGKDCVAIACDLRLGNQALTVACNQEKIFSITPTTYLGLPGLASDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T+Y++L R +Y +RE+R + P TF LVS+ LYE+RFGPYF +P+IAGL + PF+
Sbjct: 61 LTVYEKLRHRTNMYAMREDRLITPTTFTHLVSSTLYERRFGPYFIEPIIAGLEADGTPFV 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
T D IG AKDFVVAGTA E LYG EA+++P ++ + LFET+ QALL++VDRD S
Sbjct: 121 ATTDLIGCINAAKDFVVAGTASEKLYGMSEALWEPGLDAEALFETIGQALLNAVDRDAYS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++ ++ +R LK RMD
Sbjct: 181 GWGAVVYVIEKDKVTKRTLKARMD 204
>gi|134106685|ref|XP_777884.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260584|gb|EAL23237.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 216
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 141/196 (71%), Gaps = 6/196 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ I+D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------D 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AGL
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 115 EDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
+P+I TMD+IG KDF VAGTA + LYG E +++PD+EP++LFET+SQ LLS+V
Sbjct: 121 HPRPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAV 180
Query: 175 DRDCLSGWGGHVYIVT 190
DRD LSGWG V I+
Sbjct: 181 DRDALSGWGAVVNIIN 196
>gi|429329532|gb|AFZ81291.1| proteasome subunit beta type 3, putative [Babesia equi]
Length = 217
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 138/214 (64%), Gaps = 12/214 (5%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
I+ YNG A+VAMVG C AIA D+RLG+ Q TI T+F + ++ D+ F SGLATD Q
Sbjct: 4 ISSYNGGAVVAMVGDQCVAIACDKRLGMNQQITIGTNFPKAFRVTDKSFFAASGLATDVQ 63
Query: 62 TLY-----------QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIA 110
T+Y + + FR +Y+ E M +++VS +LY +RF P+F + V+A
Sbjct: 64 TMYVNHPCTPCCRKEEIEFRVNMYEASSESKMSINKLSNMVSTMLYSRRFSPWFVEAVVA 123
Query: 111 GLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQAL 170
GL ++KPFI D IGA DFVVAGT E LYG CEA+FKP+ PDELFE VSQ L
Sbjct: 124 GLDAQNKPFISCFDLIGAPCNPDDFVVAGTCAEQLYGICEALFKPNAGPDELFEIVSQCL 183
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
++ +DRDCLSGWG VYI+TPT I R LK RMD
Sbjct: 184 MAGIDRDCLSGWGAQVYIITPTSISLRTLKTRMD 217
>gi|17535357|ref|NP_494913.1| Protein PBS-3 [Caenorhabditis elegans]
gi|17380195|sp|Q23237.1|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|351050990|emb|CCD73694.1| Protein PBS-3 [Caenorhabditis elegans]
Length = 204
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 141/204 (69%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD S
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY +T ++ +K RMD
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204
>gi|320580955|gb|EFW95177.1| Beta 3 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 191
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 146/192 (76%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG Q +A +F++I ++ +F+GL+GLATD T+Y+ + L
Sbjct: 1 MVGKDCVAIACDLRLGNQSLGVANNFEKIFQLG-HVFLGLTGLATDVTTVYENFRMKTNL 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y++REER+++PE+FA+LVS+ LYE+RFGP+F P++AG+ S KPFIC D IG + A
Sbjct: 60 YKMREEREIEPESFANLVSSSLYERRFGPWFVGPLVAGINSKTGKPFICGFDFIGCIDYA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDFVV+GTA + LYG CE++++PD+EP++LFET+SQALL++ DRD LSGWG VY++T
Sbjct: 120 KDFVVSGTATDQLYGMCESLYEPDLEPEDLFETISQALLNAADRDALSGWGAVVYVITKD 179
Query: 193 EIKERILKGRMD 204
++ +R LK R D
Sbjct: 180 KVIKRYLKSRQD 191
>gi|256070137|ref|XP_002571402.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646868|emb|CCD58589.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 194
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 139/189 (73%), Gaps = 1/189 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++AM GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE + +KP+T +++S LLYE+RFGPYF +PVIAG+ +KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG A DFVV+GT E +YG CE +++ +M ELFE +SQ +L++++RD +
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAV 180
Query: 180 SGWGGHVYI 188
SGWG VY+
Sbjct: 181 SGWGARVYL 189
>gi|449016282|dbj|BAM79684.1| 20S core proteasome subunit beta 3 [Cyanidioschyzon merolae strain
10D]
Length = 207
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 138/200 (69%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
YNG A+ A G C AIA+DRR G T+A D R+ ++HDRL +GL+GLATD TL
Sbjct: 8 HYNGGAVFAATGNQCVAIAADRRFGQAQLTLACDANRLFRVHDRLVLGLTGLATDCLTLA 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+R+ R LY+L E+R+ KP T ++LVSALLYE+RF PYF +PVI GLS ++KP+ C+MD
Sbjct: 68 ERVRMRTNLYRLGEKREPKPATISALVSALLYERRFAPYFVEPVIVGLSGDNKPYCCSMD 127
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
+G +FV AGT ESLYG E ++P ++P++LFE +Q +L+++DRDCLSGWG
Sbjct: 128 LLGTPMETDEFVAAGTCAESLYGTGETFWRPGLDPEDLFEVTAQCMLAALDRDCLSGWGA 187
Query: 185 HVYIVTPTEIKERILKGRMD 204
VY++ + R LK RMD
Sbjct: 188 VVYVLHSEGVTVRELKARMD 207
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 140/204 (68%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDSNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD S
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY +T ++ +K RMD
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204
>gi|56755285|gb|AAW25822.1| unknown [Schistosoma japonicum]
Length = 190
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG A DFVV+GT E +YG CE +++ +M+ ELFE +SQ +L++++RD +
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 180 SGWGGHVYIV 189
SGWG VY++
Sbjct: 181 SGWGARVYLM 190
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
Length = 204
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 140/204 (68%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD S
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY +T ++ +K RMD
Sbjct: 181 GWGAVVYTITKDKVNISTIKARMD 204
>gi|34859236|ref|XP_215842.2| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
gi|109470850|ref|XP_001081206.1| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
Length = 205
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+ A GKNC AIA+DR +Q Q + TDFQ+I + RL+I L+GL TD
Sbjct: 1 MSIMSYNGGAITATKGKNCVAIAADRHFRIQAQMVTTDFQKIFPMGYRLYIDLAGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E + +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQHLKFRLNLYELKEGQQIKPYTLLSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC++D IG + DFVV+GT E +YG CE++++P+++ + LFET+SQA+L++VD+D +
Sbjct: 121 ICSLDLIGCSMVTNDFVVSGTCSEQMYGMCESLWEPNVDLEHLFETISQAMLNAVDQDAM 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
S G V+I+ +I R LK +MD
Sbjct: 181 SSMGVIVHIIEKDKITTRKLKAQMD 205
>gi|156088863|ref|XP_001611838.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154799092|gb|EDO08270.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 205
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 140/203 (68%), Gaps = 2/203 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
I YNG A+VAMVG C AIA D+RLG+ Q TI+++F + K+ D + GLATD Q
Sbjct: 4 IESYNGGAVVAMVGNGCVAIACDKRLGMNGQHTISSNFPKAFKVTDTAYFAACGLATDIQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+ + F+ +Y LR E++M +T A +V +LLY +RFGP+F V+AGL D+D P I
Sbjct: 64 TMKSEIEFKTNMYALRCEKNMGVKTLAHMVGSLLYSRRFGPWFVSSVVAGL-DKDTPHIY 122
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
D IGA AKDFVV GT E LYG CE++++P+MEP ELFET+SQ L++++DRDCLSG
Sbjct: 123 CFDLIGAPCNAKDFVVVGTCSEQLYGICESLYRPNMEPSELFETISQCLMAAIDRDCLSG 182
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WG V+++TP +I LK RMD
Sbjct: 183 WGAEVHMITPEKITVSTLKTRMD 205
>gi|50556674|ref|XP_505745.1| YALI0F22341p [Yarrowia lipolytica]
gi|49651615|emb|CAG78556.1| YALI0F22341p [Yarrowia lipolytica CLIB122]
Length = 206
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 143/189 (75%), Gaps = 5/189 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG + VAMVGK+C AIA D R+G Q ++ DF+++ D +++GL+GLATD QTL+
Sbjct: 6 EINGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYLGLTGLATDVQTLH 65
Query: 65 QRLVFRHK--LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFIC 121
+ VFR K LY++ EER ++PETFA+LVS+ LYEKRFGPYF P++AG+ S +KPFIC
Sbjct: 66 E--VFREKTNLYKMAEERQIEPETFANLVSSTLYEKRFGPYFVGPIVAGINSKTEKPFIC 123
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
D IG + AKDF+V+GTA + LYG CE++++PD+EP++LF T SQAL+ ++DRD L G
Sbjct: 124 GFDLIGCIDFAKDFIVSGTASDMLYGMCESLWQPDLEPEDLFNTCSQALMCAMDRDPLGG 183
Query: 182 WGGHVYIVT 190
WG V+I+T
Sbjct: 184 WGAIVWIIT 192
>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
Length = 204
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 140/204 (68%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C MD+IG +DFV GT E L G CE ++ +M+P+ELFE +Q++LS ++RD S
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPEELFEATAQSILSCLERDAAS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY +T ++ +K RMD
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204
>gi|443927308|gb|ELU45815.1| 20S proteasome subunit beta 3 [Rhizoctonia solani AG-1 IA]
Length = 415
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 144/201 (71%), Gaps = 12/201 (5%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI + NG +++AM GKNC AIASD RLG Q T+A +F++I + DRL++GL GLATD
Sbjct: 1 MSIMQLNGGSVIAMAGKNCVAIASDLRLGNQALTVACNFEKIFPVTDRLYVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS--DEDKP 118
TL +RL FR +Y ++EER+++P+ FA LVS+ LYE+RFGP+F +PVIAGL+ + KP
Sbjct: 61 LTLRERLRFRVNMYTMKEEREIQPKAFAHLVSSTLYERRFGPFFIEPVIAGLTPGPDPKP 120
Query: 119 FICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM----------EPDELFETVSQ 168
FI D IG L DFVV+GTA + L+G E++++PD+ EP++LFET+SQ
Sbjct: 121 FIAATDLIGCLTLPDDFVVSGTASDKLFGVAESLWEPDLVRRHDAPVLTEPEDLFETISQ 180
Query: 169 ALLSSVDRDCLSGWGGHVYIV 189
LL++VDRD SGWG V+++
Sbjct: 181 TLLNAVDRDAYSGWGAIVHVM 201
>gi|225712652|gb|ACO12172.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
Length = 205
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA++AM G +C +IASD R G+ T+ TDF + ++ LF+GL+GLATD
Sbjct: 1 MSVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTLEMGPGLFVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT+ Q+L FR K+++LRE R M+P TF++++S LLYE+RFGP+F ++AG E+KPF
Sbjct: 61 QTVQQKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNSIVAGYDYVENKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I +MD IGA + +DFV AGT+ +SL G CEA++ +M P+EL E SQA+++S DRD L
Sbjct: 121 ISSMDLIGAITIPEDFVAAGTSEDSLMGMCEALWFENMNPEELSEATSQAIMNSFDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+GWG V+I+ ++ R +K RMD
Sbjct: 181 AGWGAEVHIIEKHQVTTRRIKTRMD 205
>gi|196476700|gb|ACG76215.1| proteasome beta 3 subunit [Amblyomma americanum]
Length = 182
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK+C AIA+DRRLG + TIA DFQRI ++ +L+ GL GLATD+
Sbjct: 1 MSIMSYNGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+LRE R + P+T S++S LLYE+RFGPYF QPV+AGL ++P+
Sbjct: 61 QTVAQRLKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDPVSNEPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD IG + KDFVVAGT E YG CE +++PDM PDELFE +QAL+++ DRD
Sbjct: 121 ICGMDLIGCIDSPKDFVVAGTCEEQCYGMCETLWEPDMGPDELFEATAQALMNAFDRDSS 180
Query: 180 SG 181
SG
Sbjct: 181 SG 182
>gi|402589044|gb|EJW82976.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 205
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 139/205 (67%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G ++AM G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D+
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFNSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
+T+ ++ FR LY+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVTAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD+IG DFV GT E L G CE +K DM PDELFE +Q++LS+++RD
Sbjct: 121 ICAMDTIGCISAPNDFVAVGTGTEYLLGVCEGFWKEDMNPDELFEATAQSMLSAMERDAA 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY +T ++ + +K RMD
Sbjct: 181 SGWGAIVYTITKDKVNIKTIKTRMD 205
>gi|154308476|ref|XP_001553574.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 198
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 143/198 (72%), Gaps = 7/198 (3%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELA 132
Y+LREER++ P T A+LVS+ LYE+RFGP+F PV+AGL + KPFIC DSIG + A
Sbjct: 61 YRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDM------EPDELFETVSQALLSSVDRDCLSGWGGHV 186
KDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG HV
Sbjct: 121 KDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGPEDLFETISQALLNAVDRDALSGWGAHV 180
Query: 187 YIVTPTEIKERILKGRMD 204
YI+ ++ +R+LKGR D
Sbjct: 181 YIIEKDKVTKRLLKGRQD 198
>gi|149235806|ref|XP_001523781.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452760|gb|EDK47016.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 212
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 143/205 (69%), Gaps = 7/205 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q + F++ + F+ L+GLATD T+ +
Sbjct: 8 NGGAAVAMIGKDCIAIASDLRLGSQSLGVLNHFEKTFQFLPHTFMALTGLATDVTTVLEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-------SDEDKPF 119
F+ LY+LREE ++P T A+LVS+LLYE+RFGP+F P++AGL + E KPF
Sbjct: 68 FKFKTNLYKLREEHYIEPLTLANLVSSLLYERRFGPWFVSPIVAGLEKVKGSKNGEVKPF 127
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC DSIG + + DF+V+GTA + LYG CE +++P++EP+ELFET+SQ LL++VDRD L
Sbjct: 128 ICGFDSIGCIDYSHDFIVSGTATDQLYGMCEGLYEPNLEPEELFETISQCLLNAVDRDAL 187
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+I+T ++ +R LK R D
Sbjct: 188 SGWGCVVHIITKDKVIKRTLKTRQD 212
>gi|255712483|ref|XP_002552524.1| KLTH0C06886p [Lachancea thermotolerans]
gi|238933903|emb|CAR22086.1| KLTH0C06886p [Lachancea thermotolerans CBS 6340]
Length = 205
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q +A +F++I + +F+GL+GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVANNFEKIFH-YGHVFLGLTGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+L+E+R ++PETF LVS+ LYEKRFGPYF PV+AG+ S KP+I D
Sbjct: 67 FRYKTNMYKLKEDRFIEPETFTQLVSSTLYEKRFGPYFTGPVVAGINSRTGKPYISGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDFVV+GTA E L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFVVSGTASEQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAA 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVIKRYLKTRQD 205
>gi|27450761|gb|AAO14683.1|AF508264_1 beta 3 subunit of 20S proteasome [Pyrocystis lunula]
Length = 214
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
+ +YNGSA+VAM G C IASD R GV QLQT+ Q+ ++ D+ F+G++GLATD Q
Sbjct: 4 LMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+ Q L FR KL+ LREER M+P+T +L+S++LYEKRFGPYF +PV+AGL + PF+C
Sbjct: 64 TMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFLC 123
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGA A+DFVV+GT+ E L+G CE+ ++P M DELFET++Q LLS+VDRDCL+
Sbjct: 124 AFDFIGAMSKAQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRDCLA 182
>gi|392299798|gb|EIW10890.1| Pup3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 205
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERTIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ E+ +R LK R D
Sbjct: 187 VYIIKKDEVVKRYLKMRQD 205
>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
Length = 205
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 138/205 (67%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G ++AM G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D+
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
+T+ ++ FR LY+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD+IG DFV GT E L G CE +K M PDELFE +Q++LS+++RD
Sbjct: 121 ICAMDTIGCISAPNDFVAVGTGTEYLLGVCEGFWKEGMNPDELFEATAQSMLSAMERDAA 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY +T ++ + +K RMD
Sbjct: 181 SGWGAIVYTITKDKVNIKTIKTRMD 205
>gi|398364611|ref|NP_011020.3| proteasome core particle subunit beta 3 [Saccharomyces cerevisiae
S288c]
gi|141337|sp|P25451.1|PSB3_YEAST RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Macropain subunit PUP3; AltName:
Full=Multicatalytic endopeptidase complex subunit PUP3;
AltName: Full=Proteasome component PUP3
gi|11514000|pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
gi|11514014|pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
gi|14488814|pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488828|pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765708|pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765722|pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847468|pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
gi|178847482|pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
gi|178847510|pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847524|pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462944|pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462958|pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462972|pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462986|pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463000|pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463014|pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361180|pdb|3MG6|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361194|pdb|3MG6|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361208|pdb|3MG7|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361222|pdb|3MG7|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361236|pdb|3MG8|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361250|pdb|3MG8|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|378792249|pdb|3UN4|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792263|pdb|3UN4|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792283|pdb|3UN8|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792297|pdb|3UN8|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|403071956|pdb|4B4T|3 Chain 3, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072200|pdb|4G4S|J Chain J, Structure Of Proteasome-Pba1-Pba2 Complex
gi|444302347|pdb|4INR|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302361|pdb|4INR|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302375|pdb|4INT|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302389|pdb|4INT|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302403|pdb|4INU|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302417|pdb|4INU|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|172337|gb|AAA34946.1| ORF1 [Saccharomyces cerevisiae]
gi|603332|gb|AAB64649.1| Pup3p [Saccharomyces cerevisiae]
gi|151944812|gb|EDN63071.1| 20S proteasome subunit beta3_sc [Saccharomyces cerevisiae YJM789]
gi|190405659|gb|EDV08926.1| proteasome component PUP3 [Saccharomyces cerevisiae RM11-1a]
gi|256271461|gb|EEU06515.1| Pup3p [Saccharomyces cerevisiae JAY291]
gi|259146019|emb|CAY79279.1| Pup3p [Saccharomyces cerevisiae EC1118]
gi|285811728|tpg|DAA07756.1| TPA: proteasome core particle subunit beta 3 [Saccharomyces
cerevisiae S288c]
gi|323305263|gb|EGA59010.1| Pup3p [Saccharomyces cerevisiae FostersB]
gi|323333773|gb|EGA75164.1| Pup3p [Saccharomyces cerevisiae AWRI796]
gi|323337981|gb|EGA79220.1| Pup3p [Saccharomyces cerevisiae Vin13]
gi|323355291|gb|EGA87116.1| Pup3p [Saccharomyces cerevisiae VL3]
gi|349577761|dbj|GAA22929.1| K7_Pup3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766114|gb|EHN07615.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 205
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ E+ +R LK R D
Sbjct: 187 VYIIKKDEVVKRYLKMRQD 205
>gi|82802844|gb|ABB92466.1| rcPSMB3 [Gorilla gorilla]
Length = 204
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 142/204 (69%), Gaps = 1/204 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DR G+Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNCVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E + +KP TF S+V+ LYEK FGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANPLYEKHFGPYYTEPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
C++D IG + DFVV G+ E +YG CE++++P+M+P+ LFET+SQA+L++VD
Sbjct: 121 SCSLDLIGCPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDWGAG 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRM 203
SG G ++I +I R LK +M
Sbjct: 181 SGMGVIIHITEKDKITTRTLKAQM 204
>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513421|pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513435|pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150385|pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150392|pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279376|pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279390|pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032210|pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032224|pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490851|pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490865|pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016375|pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
gi|190016389|pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
gi|197725329|pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725343|pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939220|pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939234|pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939248|pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939262|pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828245|pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828259|pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588329|pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588343|pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588357|pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588371|pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588551|pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588565|pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508231|pdb|1VSY|J Chain J, Proteasome Activator Complex
gi|298508245|pdb|1VSY|X Chain X, Proteasome Activator Complex
gi|298508447|pdb|3L5Q|N Chain N, Proteasome Activator Complex
gi|298508461|pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
gi|330689389|pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689403|pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361152|pdb|3MG0|I Chain I, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361166|pdb|3MG0|W Chain W, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892349|pdb|3OKJ|I Chain I, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892363|pdb|3OKJ|W Chain W, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780427|pdb|3OEU|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780441|pdb|3OEU|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780455|pdb|3OEV|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780469|pdb|3OEV|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610680|pdb|3TDD|I Chain I, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610694|pdb|3TDD|W Chain W, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545854|pdb|3SHJ|I Chain I, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545868|pdb|3SHJ|W Chain W, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|390980824|pdb|3SDI|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980838|pdb|3SDI|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980852|pdb|3SDK|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980866|pdb|3SDK|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550740|pdb|4GK7|I Chain I, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550754|pdb|4GK7|W Chain W, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973868|pdb|4FZC|I Chain I, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973882|pdb|4FZC|W Chain W, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973896|pdb|4FZG|I Chain I, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973910|pdb|4FZG|W Chain W, 20s Yeast Proteasome In Complex With Glidobactin
Length = 204
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 7 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 66 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 125
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG
Sbjct: 126 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 185
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ E+ +R LK R D
Sbjct: 186 VYIIKKDEVVKRYLKMRQD 204
>gi|367011527|ref|XP_003680264.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
gi|359747923|emb|CCE91053.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
Length = 205
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIASD RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIASDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S +KPFI D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTEKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVVKRYLKTRQD 205
>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
Length = 1404
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 130/197 (65%), Gaps = 18/197 (9%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG A++ M GK+C AIA+D R G+Q T++T+ ++ +I D+ FIG+SGL TD+
Sbjct: 1 MSIMEYNGGAVIVMTGKDCVAIATDLRFGIQHTTVSTNNPKVYRISDKCFIGISGLVTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQ+LVFRH LY+L+EERDM P+ +LVS +LYEKRFGPYF +PVI GL +KPFI
Sbjct: 61 QTLYQKLVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFTEPVICGLDSNNKPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD IGA DF++ GT ++YG CE ++K DM RD +S
Sbjct: 121 SGMDLIGAPVQTDDFLLVGTMTPAMYGLCETLYKKDM------------------RDAMS 162
Query: 181 GWGGHVYIVTPTEIKER 197
GWG V ++ P ++ R
Sbjct: 163 GWGAEVTVICPDKVFRR 179
>gi|82802842|gb|ABB92465.1| rcPSMB3 [Pan troglodytes]
Length = 204
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 142/204 (69%), Gaps = 1/204 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DR +Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNCVAIAADRHFRIQAQMVTTDFQEIFPMGGWLYIGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E + +KP TF S+V+ LLYEK FGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANLLYEKHFGPYYTEPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
C++D IG + DFVV G+ E +YG CE++++P+M+P+ LFET+SQA+L+++D
Sbjct: 121 RCSLDLIGCPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHLFETISQAMLNAMDWGAG 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRM 203
SG G ++I +I R LK +M
Sbjct: 181 SGMGVIIHITEKNKITTRTLKAQM 204
>gi|401626020|gb|EJS43988.1| pup3p [Saccharomyces arboricola H-6]
Length = 205
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F G++GLA+D TL +
Sbjct: 8 NGGVVVAMAGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFFGVTGLASDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++VDRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVVKRYLKMRQD 205
>gi|254578212|ref|XP_002495092.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
gi|238937982|emb|CAR26159.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
Length = 205
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VAM GK+C AIA D RLG+Q ++ +F++I K + +F+GL+GLATD TL +
Sbjct: 8 NGGVCVAMTGKDCVAIACDLRLGMQSLGVSNNFEKIFK-YGHVFLGLTGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY L+E+R ++PETF LVS+ LYE+RFGP+F P++AG+ S KPFI D
Sbjct: 67 FRYKTNLYNLKEDRPIEPETFTQLVSSSLYERRFGPFFVGPIVAGINSKTGKPFIAGFDM 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++PD+EP++LFET+SQ+LL++VDRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPDLEPEDLFETISQSLLNAVDRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ + ++ L+ R D
Sbjct: 187 VYIIQKDKAVKKYLRTRQD 205
>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
Length = 218
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 141/216 (65%), Gaps = 13/216 (6%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDS 60
SI YNG ++ M G C AIA D RLG T++T+F +I K++D +++GLSGLATD
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSD 114
QTLY+ L +R LY++R+E M + FA+++S++LY RF PYF P++ G L D
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 115 EDK------PFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQ 168
E K P++ D IGAK KDFVV G E LYG CE+++ D + D LFET+SQ
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQ 182
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
LLS++DRDCLSGWG VY++TP I ++ LK RMD
Sbjct: 183 CLLSALDRDCLSGWGAEVYVLTPDTIMKKKLKARMD 218
>gi|365761090|gb|EHN02766.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841875|gb|EJT44194.1| PUP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 205
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 142/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LREER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWGAA 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVVKRYLKMRQD 205
>gi|367001775|ref|XP_003685622.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
gi|357523921|emb|CCE63188.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
Length = 205
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 142/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFN-YGHVFFGITGLATDVTTLNEV 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYEKRFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERPIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALLS+ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLSAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R L+ R D
Sbjct: 187 VYIIKKDKVIKRHLRTRQD 205
>gi|393911865|gb|EFO27070.2| proteasome subunit beta type-3 [Loa loa]
Length = 205
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 137/205 (66%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G ++AM G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D+
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
+T+ ++ FR LY+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD+IG DFV GT E L G CE +K M DELFE +Q++LS+++RD
Sbjct: 121 ICAMDTIGCISAPNDFVAVGTGTEYLLGVCEGFWKEGMNSDELFEATAQSMLSAMERDAA 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY +T ++ + +K RMD
Sbjct: 181 SGWGVIVYTITKDKVNVKTIKARMD 205
>gi|401424718|ref|XP_003876844.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493088|emb|CBZ28372.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 205
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+T+ ++ ++D + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT ++ FR +Y+LREER++ + F+S+++++LYE RFGP+F +PVI + K +
Sbjct: 61 QTFVNKVQFRTDMYKLREERNITGKAFSSMITSMLYEARFGPWFVEPVIGSIDKSTGKVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGTA ESL+G CEA+++P M P+E+FE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT +I R++KGR D
Sbjct: 181 SGYGAVAMIVTKDKITTRLIKGRKD 205
>gi|146091504|ref|XP_001470046.1| putative proteasome beta 3 subunit [Leishmania infantum JPCM5]
gi|398017851|ref|XP_003862112.1| proteasome beta 3 subunit, putative [Leishmania donovani]
gi|134084840|emb|CAM69238.1| putative proteasome beta 3 subunit [Leishmania infantum JPCM5]
gi|322500341|emb|CBZ35418.1| proteasome beta 3 subunit, putative [Leishmania donovani]
Length = 205
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+T+ ++ ++D + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT ++ FR +Y+LREERD+ + FA++++++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGTA ESL+G CEA+++P M P+E+FE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPQDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT +I R++KGR D
Sbjct: 181 SGYGAVAMIVTKDKITTRLIKGRKD 205
>gi|365981473|ref|XP_003667570.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
gi|343766336|emb|CCD22327.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
Length = 205
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFLGITGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+E+R ++PETF LVS+ LYEKRFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKSNLYELKEDRAIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVIKRHLKMRQD 205
>gi|444323175|ref|XP_004182228.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
gi|387515275|emb|CCH62709.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
Length = 205
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 142/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F G++GLATD TL +
Sbjct: 8 NGGVVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFFGITGLATDVTTLNEL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+L+E R ++PETF +LVS+ LY KRFGPYF PV+AGL S KP+I D
Sbjct: 67 FRYKTNMYKLKENRSIEPETFTNLVSSTLYSKRFGPYFVGPVVAGLNSKTGKPYIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++VDRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAVDRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVIKRYLKTRQD 205
>gi|410084182|ref|XP_003959668.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
gi|372466260|emb|CCF60533.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
Length = 205
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I ++ +F G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFN-YEHVFFGITGLATDVTTLNEV 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+E+R ++PETFA LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEDRAIEPETFAQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R L+ R D
Sbjct: 187 VYIIKKDKVIKRNLRMRQD 205
>gi|346978239|gb|EGY21691.1| proteasome component PUP3 [Verticillium dahliae VdLs.17]
Length = 222
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 142/199 (71%), Gaps = 13/199 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 36 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDL 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 95 FRYKSNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA E L+G CE++++PD+ +LL++VDRD LSGWG H
Sbjct: 155 IGCIDFAKDFIVSGTASEQLFGMCESLWEPDL-----------SLLNAVDRDALSGWGAH 203
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R+LKGR D
Sbjct: 204 VYIIEKDKVTKRLLKGRQD 222
>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 205
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 137/205 (66%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM G C IA+D RLG Q+ TIAT+ +++ K+ DR++IGL G +D+
Sbjct: 1 MSIMSYNGGTILAMAGNECVCIATDLRLGEQMTTIATNVKKVHKLGDRVYIGLGGFYSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
+T+ +++FR LY+LRE R +KPE A+++S LLY+ RFG Y +P++AGL +K +
Sbjct: 61 KTVLDKILFRKNLYELRENRKIKPEVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC MD+IG KDFV GT E L G CE + +M DELFE +Q++LS+++RD
Sbjct: 121 ICGMDTIGCIAAPKDFVAVGTGTEYLLGVCEGFWHENMNADELFEATAQSMLSAMERDAA 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG +Y +T ++ + +K RMD
Sbjct: 181 SGWGVLIYTITKNKVNIKTIKARMD 205
>gi|366989209|ref|XP_003674372.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
gi|342300235|emb|CCC67993.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
Length = 205
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F+GL+GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFLGLTGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ LY+L+E+R ++P+TF LVS LYEKRFGPYF PV+AG++ + +KPFI D
Sbjct: 67 FRYKTNLYKLKEDRPIEPDTFIQLVSTTLYEKRFGPYFVGPVVAGINSQTEKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVVKRHLKMRQD 205
>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
Length = 205
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 142/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F+++ + +F G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGNQSLGVSNNFEKVFN-YGHVFFGITGLATDVTTLNEL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVVKRYLKMRQD 205
>gi|17380264|sp|Q9NDA1.1|PSB3_TRYBB RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|9622232|gb|AAF89685.1|AF169653_1 20S proteasome beta 3 subunit [Trypanosoma brucei]
gi|261334718|emb|CBH17712.1| proteasome beta 3 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 205
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF + SD RLG QL+TI+ + ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGT ESL+G CEA+++P +EP+ELFE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT ++ R++KGR D
Sbjct: 181 SGYGAVAAIVTKDKLVTRLIKGRKD 205
>gi|156849065|ref|XP_001647413.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
gi|156118099|gb|EDO19555.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
Length = 205
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGNQSLGVSNNFEKIFH-YGHVFLGITGLATDVLTLSEE 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRLIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ +R LK R D
Sbjct: 187 VYIIKKDKVIKRHLKTRQD 205
>gi|71755781|ref|XP_828805.1| proteasome subunit beta 3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834191|gb|EAN79693.1| proteasome beta 3 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 205
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 145/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF + SD RLG QL+TI+ + ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLYVINDGIVMGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGT ESL+G CEA+++P +EP+ELFE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT ++ R++KGR D
Sbjct: 181 SGYGAVAAIVTKDKLVTRLIKGRKD 205
>gi|157871480|ref|XP_001684289.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
gi|68127358|emb|CAJ04676.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
Length = 205
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+T+ ++ +++ + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNNSIVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT ++ FR +Y+LREERD+ + FA++++++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGTA ESL+G CEA+++P M P+E+FE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT +I R++KGR D
Sbjct: 181 SGYGAVAMIVTKDKITTRLIKGRKD 205
>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 209
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 138/199 (69%), Gaps = 4/199 (2%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG +++AM G+ C AI +DRRLG Q QT+AT+FQ++ +I D + +GL+GLATD QT ++
Sbjct: 7 YNGGSMLAMKGEQCVAIGADRRLGAQFQTVATNFQKVFRIQDNILLGLTGLATDVQTFHR 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDK---PFIC 121
+ ++ LY+LRE +DMK TF +L+SA LYEKR+GPYF P++AGL DE K P
Sbjct: 67 LIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVSPIVAGLEYDEVKGVIPITA 126
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
T DSIG + +F V GT + L G+CE+ ++ ++PDEL + V+Q+L + DRD LSG
Sbjct: 127 TYDSIGCTSIEGEFQVGGTGADGLIGSCESFWRKGLKPDELEDIVAQSLSAGCDRDILSG 186
Query: 182 WGGHVYIVTPTEIKERILK 200
WGG VY +T + ++LK
Sbjct: 187 WGGVVYTLTKDNLSVKVLK 205
>gi|29841419|gb|AAP06451.1| similar to NM_011971 proteasome (prosome, macropain) subunit, beta
type 3 in Mus musculus [Schistosoma japonicum]
Length = 209
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG A DFVV+GT E +YG CE +++ +M+ ELFE +SQ +L++++RD +
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 180
Query: 180 SGWG 183
SG G
Sbjct: 181 SGLG 184
>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
Length = 204
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 135/204 (66%), Gaps = 1/204 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDS 60
SI YNG A++AM GK C A A+D RLG +TI+TDF ++ + + +G SGLATD
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL + F+ LY LREER++ + + + +++LY KRF PYF +P++AGL + + PFI
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IG + +F ++GTA L+G CE+ ++PD+EPDEL E VSQ +LS +DRD S
Sbjct: 121 AGYDLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAFS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++TP ++ + LK RMD
Sbjct: 181 GWGCKVYLLTPEKLVTKTLKSRMD 204
>gi|195389042|ref|XP_002053187.1| GJ23747 [Drosophila virilis]
gi|194151273|gb|EDW66707.1| GJ23747 [Drosophila virilis]
Length = 208
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG ++AM GK+C IA+DRR G+Q T D Q++ + RL++GL+GL TD T+Y
Sbjct: 9 YNGGCVIAMQGKDCIGIATDRRFGLQSHTAGEDCQKVFHLSPRLYLGLTGLQTDIMTVYN 68
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL++R +Y++ E R++ P+ L+S LLYE RFGP+F +PVIAGL E +P+IC MD
Sbjct: 69 RLLYRKNVYEINEGREVSPKVLTELLSHLLYEHRFGPFFVEPVIAGLDPETLEPYICCMD 128
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + DFV GT + L G CE+++ P++ ELF+T++QA+L S +RD +SGWG
Sbjct: 129 LIGCANVTNDFVATGTCSDQLVGMCESVWSPNLNATELFKTIAQAMLGSFNRDAVSGWGS 188
Query: 185 HVYIVTPTEIKERILKGRMD 204
++I+ +I ER+++ R D
Sbjct: 189 SIFILEKDKITERLIRTRKD 208
>gi|323309416|gb|EGA62633.1| Pup3p [Saccharomyces cerevisiae FostersO]
Length = 191
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 138/192 (71%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL + ++ L
Sbjct: 1 MTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEMFRYKTNL 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D IG + A
Sbjct: 60 YKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEA 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG VYI+
Sbjct: 120 KDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKD 179
Query: 193 EIKERILKGRMD 204
E+ +R LK R D
Sbjct: 180 EVVKRYLKMRQD 191
>gi|302306791|ref|NP_983166.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|299788687|gb|AAS50990.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|374106369|gb|AEY95279.1| FABR217Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 141/199 (70%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I +F+GL+GLATD TLY+
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNRFEKIFNF-GHVFLGLTGLATDVTTLYET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+++E+R ++P TF+ LVS+ LYE+RFGPYF PV+AG+ S KP+I D
Sbjct: 67 FRYKTNMYKMQEDRPIEPNTFSQLVSSTLYERRFGPYFVGPVVAGIHSKTKKPYIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG E +KDF+V+GTA + L+G CE++++P++E ++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIEESKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VY++ + +R LK R D
Sbjct: 187 VYLIEKDRVVKRYLKTRQD 205
>gi|407424924|gb|EKF39197.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 205
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM G CF I SD RLG QL+TI+ + ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINDNIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT +++ FR +LY+LREER++ + FA+L+S++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFSEKVHFRTELYKLREEREIGGKAFAALISSMLYEARFGPWFVEPVIGSIDKRTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IGA +D+V AGT ESL+G CEA+++P + P+ELFE +QA+LS+ DRD L
Sbjct: 121 LCAMDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLGPEELFEVAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT ++ R++KGR D
Sbjct: 181 SGYGAVAAIVTKDKMTTRLIKGRKD 205
>gi|154340181|ref|XP_001566047.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063366|emb|CAM39542.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 205
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+ + ++ ++D + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISMEVPKLHIVNDSVVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT ++ FR +Y+LREERD+ + FA+++ ++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFANKVEFRINMYKLREERDITGKAFAAMIESMLYEARFGPWFVEPVIGSIDKTTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGTA ESL+G CEA+++P M P+E+FE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT +I R++KGR D
Sbjct: 181 SGYGAVALIVTKEKIITRLIKGRKD 205
>gi|407859760|gb|EKG07148.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
Length = 205
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM G CF I SD RLG QL+TI+ + ++ I++ + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT +++ FR++LY+LREER++ + FA+LVS++LYE RFGP+F +PVIA + + +
Sbjct: 61 QTFSEKVRFRNELYKLREEREIGGKAFAALVSSMLYEARFGPWFVEPVIASIDKRTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IGA +D+V AGT ESL+G CEA+++P + P+ELFE +QA+LS+ DRD L
Sbjct: 121 LCAMDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLGPEELFEVAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT ++ R++ GR D
Sbjct: 181 SGYGAVAAIVTRDKMTTRLINGRKD 205
>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
Length = 202
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 1/200 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
YNG A++AM GK C A A+D RLG +TI TDF ++ + + +G SGLATD TL
Sbjct: 3 YNGGAILAMKGKECVAFATDMRLGSNGYRTIGTDFDKVIRPSSKTLMGFSGLATDIHTLT 62
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ F+ LY LREER++ + + + +++LY KRF PYF +P++AGL + + PFI D
Sbjct: 63 NLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYD 122
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG + +F ++GTA L+G CE+ ++PD+EPDEL E VSQ +LS +DRD SGWG
Sbjct: 123 LIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGC 182
Query: 185 HVYIVTPTEIKERILKGRMD 204
VY++TP ++ + LK RMD
Sbjct: 183 KVYLLTPEKLVTKTLKSRMD 202
>gi|50309707|ref|XP_454865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644000|emb|CAG99952.1| KLLA0E20197p [Kluyveromyces lactis]
Length = 205
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 141/199 (70%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AI D RLG Q +A +F++I + +F+GL+GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIGCDLRLGSQSLGVANNFEKIFH-YGHVFLGLTGLATDVLTLSES 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS LYEKRFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSTSLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E D+LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEADDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ ++ LK R D
Sbjct: 187 VYIIKKDKVIKKYLKTRQD 205
>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
Length = 204
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 135/204 (66%), Gaps = 13/204 (6%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MTGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E DM + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKTNVYEPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGAK DFVV G + E LYG CE+M+ D + + LFETVSQ LLS++DRDCLS
Sbjct: 121 NAYDLIGAKCETSDFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++TP +I ++ LK RMD
Sbjct: 181 GWGAEVYVLTPDKIIKKKLKARMD 204
>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
Length = 204
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 135/204 (66%), Gaps = 13/204 (6%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E DM + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKINVYEPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGAK DFVV G + E LYG CE+M+ D + + LFETVSQ LLS++DRDCLS
Sbjct: 121 NAYDLIGAKCETNDFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++TP +I ++ LK RMD
Sbjct: 181 GWGAEVYVLTPDKIIKKKLKARMD 204
>gi|119590978|gb|EAW70572.1| hCG1644450 [Homo sapiens]
Length = 205
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 138/205 (67%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKN AIA+DR G+Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q + Q L F+ LY+L+E + +KP TF S+V+ LYEK FGPY+ PVIAGL + KPF
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
C++D IG + DFVV G+ E +YG CE++++P+M+P+ FET+S A+L++VD
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAG 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG G ++I +I R LK +MD
Sbjct: 181 SGMGVIIHITKKDKITTRTLKAQMD 205
>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
Length = 204
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 135/204 (66%), Gaps = 13/204 (6%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E +M + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGAK DFVV G + E LYG CE+M+ D + + LFETVSQ LLS++DRDCLS
Sbjct: 121 NAYDLIGAKCETNDFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++TP +I ++ LK RMD
Sbjct: 181 GWGAEVYVLTPDKIIKKKLKARMD 204
>gi|384483641|gb|EIE75821.1| hypothetical protein RO3G_00525 [Rhizopus delemar RA 99-880]
Length = 172
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 126/185 (68%), Gaps = 26/185 (14%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG ++VAMVGK+C AIA+D+RLG Q T++TDFQ+I K D+ FIGL GLATD TL
Sbjct: 2 QYNGGSVVAMVGKDCVAIAADKRLGAQFMTVSTDFQKIFKATDKTFIGLPGLATDVLTLA 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R F+ + FGPYF +PV+AGL ++KPFIC MD
Sbjct: 62 DRFRFKTNI--------------------------FGPYFVEPVVAGLGKDNKPFICAMD 95
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
IG AKDFVV+GTAG +LYG CE++++PD+EP++LFET+SQALL++ DRD LSGWG
Sbjct: 96 LIGCINFAKDFVVSGTAGPNLYGMCESLWEPDLEPEDLFETISQALLNAQDRDALSGWGA 155
Query: 185 HVYIV 189
VY++
Sbjct: 156 VVYVM 160
>gi|71650132|ref|XP_813770.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|71653810|ref|XP_815536.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|70878686|gb|EAN91919.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
gi|70880598|gb|EAN93685.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
Length = 205
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM G CF I SD RLG QL+TI+ + ++ I++ + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT +++ FR++LY+LREER++ + FA+L+S++LYE RFGP+F +PVIA + + + +
Sbjct: 61 QTFSEKVRFRNELYKLREEREIGGKAFAALISSMLYEARFGPWFVEPVIASIDKKTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C MD IGA +D+V AGT ESL+G CEA+++P + +ELFE +QA+LS+ DRD L
Sbjct: 121 LCAMDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLGSEELFEVAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT ++ R++ GR D
Sbjct: 181 SGYGAVAAIVTRDKMTTRLINGRKD 205
>gi|340058923|emb|CCC53294.1| putative proteasome beta 3 subunit [Trypanosoma vivax Y486]
Length = 205
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF + SD RLG QL+TI+T+ ++ I+D + +GL+GL TD
Sbjct: 1 MSIMAYSGGSCLAMAGKECFVVISDNRLGEQLKTISTEVPKLHVINDSIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT Q++ FR ++Y+L EER++ + FA+LV ++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVHFRTEMYKLCEEREINGKAFAALVMSMLYEARFGPWFVEPVIGSIDRKTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGT ESL+G CEA+++P + P+ELFE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWQPGLAPEELFEVAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT +I ++++GR D
Sbjct: 181 SGYGAVAVIVTREKIVTKLIRGRKD 205
>gi|389581871|dbj|GAB64592.1| 20S proteasome subunit beta-3 [Plasmodium cynomolgi strain B]
Length = 204
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 134/204 (65%), Gaps = 13/204 (6%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG TI+T+F +I K++D +++GLSGLATD QTLY+ L +R
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKIFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSDEDK------PFI 120
LY++R+E M + FA+++S++LY RF PYF P++ G + DE K P++
Sbjct: 61 LYEIRQESPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTIDDEGKKISTFEPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGAK DFVV G GE LYG CE+++ D + D LFET+SQ LLS++DRDCLS
Sbjct: 121 TAYDLIGAKCETNDFVVNGVTGEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++TP I ++ LK RMD
Sbjct: 181 GWGAEVYVLTPDTIMKKKLKARMD 204
>gi|363752627|ref|XP_003646530.1| hypothetical protein Ecym_4692 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890165|gb|AET39713.1| hypothetical protein Ecym_4692 [Eremothecium cymbalariae
DBVPG#7215]
Length = 191
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 136/192 (70%), Gaps = 2/192 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK+C AIA D RLG Q ++ F++I + +F+GL+GLATD TLY+ ++ L
Sbjct: 1 MTGKDCVAIACDLRLGSQSLGVSNRFEKIFN-YGHVFVGLTGLATDVTTLYETFRYKTNL 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIGAKELA 132
Y+LRE+R ++P TF+ LVS+ LYEKRFGPYF PV+AG+ KP+I D IG E +
Sbjct: 60 YKLREDRPIEPSTFSHLVSSTLYEKRFGPYFVGPVVAGIDTISQKPYIAGFDLIGCIEES 119
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
KDF+V+GTA E L+G CE++++P++ ++LFET+SQALL++ DRD LSGWG VY++
Sbjct: 120 KDFIVSGTASEQLFGMCESLYEPNLGSEDLFETISQALLNAADRDALSGWGAVVYLIEKD 179
Query: 193 EIKERILKGRMD 204
++ +R LK R D
Sbjct: 180 KVVKRYLKTRQD 191
>gi|343471879|emb|CCD15804.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343474036|emb|CCD14226.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 205
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF I SD RLG L+TI+ D ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVIISDNRLGEGLKTISMDVPKLHVINDGIVMGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT Q++ FR ++Y+LREER++ + FA+LV+++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVRFRTEMYKLREEREINGKAFAALVASMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D IGA +D+V AGT ESL+G CEA+++P +E +ELFE +QA+LS+ DRD L
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEAEELFEIAAQAMLSACDRDSL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SG+G IVT ++ R+++GR D
Sbjct: 181 SGYGAVAAIVTKDKLITRLIRGRKD 205
>gi|82802840|gb|ABB92464.1| rcPSMB3 [Homo sapiens]
Length = 204
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 137/204 (67%), Gaps = 1/204 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKN AIA+DR G+Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q + Q L F+ LY+L+E + +KP TF S+V+ LYEK FGPY+ PVIAGL + KPF
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
C++D IG + DFVV G+ E +YG CE++++P+M+P+ FET+S A+L++VD
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAG 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRM 203
SG G ++I +I R LK +M
Sbjct: 181 SGMGVIIHITKKDKITTRTLKAQM 204
>gi|221052302|ref|XP_002257727.1| beta3 proteasome subunit [Plasmodium knowlesi strain H]
gi|193807558|emb|CAQ38063.1| beta3 proteasome subunit, putative [Plasmodium knowlesi strain H]
Length = 204
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 133/204 (65%), Gaps = 13/204 (6%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG TI+T+F ++ K++D +++GLSGLATD QTLY+ L +R
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKVFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL------SDEDK------PFI 120
LY++R+E M + FA+++S++LY RF PYF P++ G DE K P++
Sbjct: 61 LYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTFDDEGKKIRTFEPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGAK KDFVV G E LYG CE+++ D + D LFET+SQ LLS++DRDCLS
Sbjct: 121 TAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG VY++TP I ++ LK RMD
Sbjct: 181 GWGAEVYVLTPDSIMKKKLKARMD 204
>gi|403214964|emb|CCK69464.1| hypothetical protein KNAG_0C03600 [Kazachstania naganishii CBS
8797]
Length = 205
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 141/199 (70%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VAM GK+C AIA D RLG Q ++ +F++I + +F+G++GLATD TL
Sbjct: 8 NGGICVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFMGMTGLATDVLTLSDV 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRMIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++E D+LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEADDLFETISQALLNAADRDALSGWGAV 186
Query: 186 VYIVTPTEIKERILKGRMD 204
VYI+ ++ ++ LK R D
Sbjct: 187 VYIIKKDKVIKKNLKMRQD 205
>gi|405971643|gb|EKC36468.1| Proteasome subunit beta type-3 [Crassostrea gigas]
Length = 161
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
Query: 48 RLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP 107
RL+IGL GLATD QT++QRL FR LY+LRE R +KP+TF S+VS LLYE+RFGPYF +P
Sbjct: 4 RLYIGLPGLATDVQTVHQRLQFRLNLYELRENRRIKPKTFLSMVSNLLYERRFGPYFVEP 63
Query: 108 VIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETV 166
VIAGL + +PFI +MD IG + DFVV+GT E +YG CE++++P+M+P ELFE++
Sbjct: 64 VIAGLDPKTFEPFIASMDLIGCPMVTDDFVVSGTCSEQMYGMCESVWEPNMDPQELFESI 123
Query: 167 SQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
SQALL++VDRD +SGWGG V+I+ ++ LKGRMD
Sbjct: 124 SQALLNAVDRDAVSGWGGIVHIIEKDQVTTTELKGRMD 161
>gi|207345904|gb|EDZ72572.1| YER094Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 187
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 132/181 (72%), Gaps = 2/181 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAV 186
Query: 186 V 186
V
Sbjct: 187 V 187
>gi|312067975|ref|XP_003136996.1| proteasome subunit beta type 3 [Loa loa]
Length = 192
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 128/192 (66%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D++T+ ++ FR L
Sbjct: 1 MAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDAKTVLDKITFRKNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDSIGAKELA 132
Y+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+IC MD+IG
Sbjct: 61 YELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTIGCISAP 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
DFV GT E L G CE +K M DELFE +Q++LS+++RD SGWG VY +T
Sbjct: 121 NDFVAVGTGTEYLLGVCEGFWKEGMNSDELFEATAQSMLSAMERDAASGWGVIVYTITKD 180
Query: 193 EIKERILKGRMD 204
++ + +K RMD
Sbjct: 181 KVNVKTIKARMD 192
>gi|399218578|emb|CCF75465.1| unnamed protein product [Babesia microti strain RI]
Length = 192
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Query: 14 MVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C +I SD RLGV + TI DF ++ KI+++ F G SGLATD Q++ + L F+ K
Sbjct: 1 MCGHECVSIGSDLRLGVNRFTTIGNDFPKVFKINNKCFFGSSGLATDIQSILKELKFKIK 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELA 132
+++L +ERD+ ++ +V+ +LY +RFGP+F P++AGL D+++PFI + D IGA +
Sbjct: 61 IFELEQERDIGIQSLGHVVANMLYSRRFGPWFISPIVAGLDDKNRPFISSYDLIGAPSDS 120
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT 192
DFVV+G+ + L+G CE++ M DELFET SQ LL+ +DRDCLSGWG V+++TP
Sbjct: 121 DDFVVSGSCSDQLFGICESLHHSGMNEDELFETTSQCLLAGLDRDCLSGWGAVVHVITPK 180
Query: 193 EIKERILKGRMD 204
+I + ++ RMD
Sbjct: 181 KIITKTIQTRMD 192
>gi|209878806|ref|XP_002140844.1| proteasome subunit beta type 3 [Cryptosporidium muris RN66]
gi|209556450|gb|EEA06495.1| proteasome subunit beta type 3, putative [Cryptosporidium muris
RN66]
Length = 194
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 128/194 (65%), Gaps = 1/194 (0%)
Query: 12 VAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
+AM GKNC AIA+D R+G Q TI+T F ++ + IG SGLATD T+ + F
Sbjct: 1 MAMKGKNCIAIATDMRMGFNQFSTISTSFNKVINPSSKTLIGFSGLATDIHTVSSTIKFH 60
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 130
LY+LREER++ + + + ++LLY KRF PY +P++AGL ++P++ D IG
Sbjct: 61 TNLYKLREEREIDAKALSHMTASLLYSKRFSPYLVEPIVAGLDKNNEPYLAGYDLIGCLS 120
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
DF ++GTA L+G CE+ +KPDM+ D+L ET+SQ +L+ +DRD LSGWG +Y++T
Sbjct: 121 KCSDFAISGTADRQLFGICESFYKPDMDTDQLMETISQCMLAGLDRDALSGWGCTIYLLT 180
Query: 191 PTEIKERILKGRMD 204
PT++ + LK RMD
Sbjct: 181 PTQLITKKLKSRMD 194
>gi|430813166|emb|CCJ29467.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 179
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M+GK+C AIASD RLG + DF +I + +++++GLSGLATD TL R + L
Sbjct: 1 MLGKDCVAIASDLRLGKGGLMVTNDFSKIIPVTEKIYMGLSGLATDIVTLLIR--YNVNL 58
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+L+EER ++P+T A+L+S +LY+KRF YF P++AGL S +PFIC +D+IG ++A
Sbjct: 59 YKLQEERVIEPKTLANLLSTVLYKKRFATYFVMPILAGLDSKTGRPFICGLDNIGCLDIA 118
Query: 133 KDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
KDFV++GTA E LYG CE +++P +EPD+LFET+SQALL++ DRD LSG G VY++T
Sbjct: 119 KDFVISGTASEQLYGICECLWEPGLEPDDLFETISQALLNAQDRDALSGMGCVVYVIT 176
>gi|124505797|ref|XP_001351012.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
gi|23510655|emb|CAD49040.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
Length = 204
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 135/204 (66%), Gaps = 13/204 (6%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G NC AIA D RLG T++T F +I K+++ +++GLSGLATD QTLY+ L +R
Sbjct: 1 MSGSNCVAIACDLRLGANTFTTVSTKFSKIFKMNNNVYVGLSGLATDIQTLYEILRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LY++R++ +M E FA+++S++LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYEVRQDAEMDVECFANMLSSILYSNRFSPYFVNPIVVGFKLKHYVDEEGEKKVNYEPYL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
D IGAK +DFVV G E L+G CE+++ D + + LFET+SQ LLS++DRDC+S
Sbjct: 121 TAYDLIGAKCETRDFVVNGVTSEQLFGMCESLYVKDQDENGLFETISQCLLSALDRDCIS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V ++TP +I ++ LK RMD
Sbjct: 181 GWGAEVLVLTPEKIIKKKLKARMD 204
>gi|413943570|gb|AFW76219.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 99
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/99 (92%), Positives = 97/99 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
>gi|413935899|gb|AFW70450.1| hypothetical protein ZEAMMB73_290009 [Zea mays]
Length = 200
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 96/99 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF+R+ K+HD+L+IGLSGLATD+
Sbjct: 102 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 161
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QTLYQRLVFRHKLYQL EERDMKPETFASLVSALLYEKR
Sbjct: 162 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKR 200
>gi|299116535|emb|CBN74723.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 220
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 130/201 (64%), Gaps = 1/201 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG + +AM GK C A+A DRR G++ Q ++T+ +R+ K++ +L G +GL TD T+
Sbjct: 20 ELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKVNGQLLCGFTGLWTDVLTVM 79
Query: 65 QRLVFRHKLYQLRE-ERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
Q L L L E +R + P A L+S LLY +R P+F +P++AGL +P++C
Sbjct: 80 QDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQ 139
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D +GA DFVVAGT+ +SLYG CEA F+P ME +ELF S+ LLS+++RDCLSG+G
Sbjct: 140 DILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYG 199
Query: 184 GHVYIVTPTEIKERILKGRMD 204
V+++T I+ R L RMD
Sbjct: 200 AVVHLITEEGIETRELTTRMD 220
>gi|401825340|ref|XP_003886765.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
gi|392997921|gb|AFM97784.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
Length = 206
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 138/202 (68%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I + G +++AM +N AI SDRRLG+ T++ +F RI KI RL++GL D+Q
Sbjct: 5 IETFYGGSVLAMASENAVAIMSDRRLGMGPITVSKEFTRIHKIGPRLYVGLPVFIPDTQV 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L +++ + L++L E+R+M+PE +S++S LLY KR PY P++AGL+ + KP++ +
Sbjct: 65 LLKKIRKNYNLFRLEEQREMEPEELSSMISFLLYSKRTSPYITSPIVAGLTSDGKPYVSS 124
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MDSIG+ KDFV AGTAG++L G CEA+++P M+ + LF T +QA L++VDRD LSGW
Sbjct: 125 MDSIGSITSPKDFVAAGTAGDNLIGICEALYRPGMDEENLFVTCTQAFLNAVDRDALSGW 184
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G YI++ + +R +KGR D
Sbjct: 185 GADCYIISQGNVTKRSIKGRCD 206
>gi|19073955|ref|NP_584561.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|19068597|emb|CAD25065.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|449329321|gb|AGE95594.1| 26S proteasome beta subunit, theta chain [Encephalitozoon cuniculi]
Length = 205
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 132/205 (64%), Gaps = 1/205 (0%)
Query: 1 MSITE-YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATD 59
MS TE + G +++AM AI D+RLG+ T++ DF RI +I RL++GL D
Sbjct: 1 MSDTETFYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPD 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
+Q L +++ + L++L +R+M+PE +S++S LLY KR PY P++AGL+ + KP+
Sbjct: 61 TQVLLRKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I MD IG+ DFV GTA ++L G CEA+++PDM+ + LF T QA L+++DRD L
Sbjct: 121 ISGMDCIGSIASPGDFVAVGTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDAL 180
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG Y++ ++ +R +KGR D
Sbjct: 181 SGWGADCYVIGKNKVTKRSIKGRCD 205
>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
Length = 204
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 128/204 (62%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EY G + +AMVGK+ I +D+R G T+ ++F R+ KI DR+ + L+G D
Sbjct: 1 MSIQEYYGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKITDRIILSLTGFVPDC 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q LY+ L +++L ++R+++P+ F+SL+S +LY KRF P+ P+IAG E+ P +
Sbjct: 61 QVLYKTLRKHVTMFKLSQQREIEPKEFSSLLSYILYSKRFSPFLISPLIAGFDRENNPHV 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
TMD IG DF GTA +SL G + +F DMEP++LF T QA L+++DR+ LS
Sbjct: 121 YTMDLIGCVSGHDDFATTGTASKSLSGIADVLFTEDMEPEDLFTTTMQAFLNAIDRNALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG I+TP++ R +K R D
Sbjct: 181 GWGSDAVILTPSKRIHREVKTRQD 204
>gi|440492147|gb|ELQ74741.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Trachipleistophora hominis]
Length = 205
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 127/202 (62%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I+ + G +++A+ GK+ I SD+RLG T++T R+ K+ D++++G++ D Q
Sbjct: 4 ISTFYGGSVLALTGKHSAIIVSDKRLGNNSITVSTQHDRVYKMSDKVYVGMTLFVPDVQM 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L ++L L+++ E R + P+ F+SL+S LY RF P F PV+AG+ DKP+IC+
Sbjct: 64 LVRKLRMEVNLFEIEENRRIDPDEFSSLLSYTLYSHRFSPRFVDPVVAGIDAHDKPYICS 123
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MD +G + + DF GTA + LYG EA++ PDM DELF T Q L++VDRD LSGW
Sbjct: 124 MDLLGCQSTSNDFCAVGTAEDKLYGLAEALYVPDMNDDELFVTAMQIFLNAVDRDALSGW 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G +I++ + +R +K RMD
Sbjct: 184 GAEAHIISRDRVVKRTVKSRMD 205
>gi|56755093|gb|AAW25726.1| SJCHGC01130 protein [Schistosoma japonicum]
Length = 184
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 114/159 (71%), Gaps = 1/159 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDME 158
+ MD IG A DFVV+GT E +YG CE +++ +M
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMH 159
>gi|349802615|gb|AEQ16780.1| putative proteasome beta 3 subunit [Pipa carvalhoi]
Length = 163
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 126/204 (61%), Gaps = 41/204 (20%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLA D
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLA-DV 59
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT+ QRL FR LY+L KPFI
Sbjct: 60 QTVSQRLKFRLNLYEL----------------------------------------KPFI 79
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C++D IG + +DFVV+GT E +YG CE++++PDMEP++LFET+SQA+L++VDRD +S
Sbjct: 80 CSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVS 139
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
G G V+++ +I R LK RMD
Sbjct: 140 GMGVVVHVIEKDKITTRTLKARMD 163
>gi|396478743|ref|XP_003840606.1| hypothetical protein LEMA_P102580.1 [Leptosphaeria maculans JN3]
gi|312217178|emb|CBX97127.1| hypothetical protein LEMA_P102580.1 [Leptosphaeria maculans JN3]
Length = 133
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKEL 131
+Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DSIG +
Sbjct: 1 MYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIGCIDF 60
Query: 132 AKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTP 191
AKDF+V+GTA + L+G CE +++PD+ P++LFET+SQALL++VDRD LSGWG HVYI+
Sbjct: 61 AKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEK 120
Query: 192 TEIKERILKGRMD 204
++ +R+LKGR D
Sbjct: 121 DKVTKRLLKGRQD 133
>gi|396080880|gb|AFN82500.1| 20S proteasome subunit [Encephalitozoon romaleae SJ-2008]
Length = 206
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 137/202 (67%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I + G +++AM +N AI SD+RLG+ T++ DF RI ++ RL++GLS D+Q
Sbjct: 5 IETFYGGSILAMASENAVAIMSDKRLGMGPITVSKDFVRIHRMGPRLYVGLSTFVPDTQV 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L +R+ + L++L E+R+M+PE ++++S LLY KR PY P++AGLS + +P+I
Sbjct: 65 LLRRIRKNYNLFKLEEQREMEPEELSNMISFLLYSKRTSPYITAPIVAGLSSDGRPYISG 124
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MD IG+ KDFV GTA ++L G CEA+++P+M+ + LF T +QA L++VDRD LSGW
Sbjct: 125 MDCIGSITSPKDFVATGTAAKNLMGICEALYRPNMDEENLFVTCAQAFLNAVDRDALSGW 184
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G Y+++ ++ +R +KGR D
Sbjct: 185 GADCYVISEGKVIKRSIKGRCD 206
>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
Length = 204
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 125/204 (61%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +Y G + +AMVGK+ I +D+R G T+ ++F R+ K+ DRL + L+G D
Sbjct: 1 MSIQQYYGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKMTDRLILSLTGFVPDC 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q LY+ L +++L E+R+++P+ FA L+S +LY KRF P+ P+I G E+ P +
Sbjct: 61 QILYKTLRKHVNMFKLNEQREIEPKEFACLLSYILYSKRFSPFLISPLIVGFDRENNPHV 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
TMD IG KDF GTA +L G + +F +E ++LF T QA L+++DR+ LS
Sbjct: 121 YTMDLIGCMSAHKDFASTGTASTNLTGIADVLFTEGLEEEDLFTTAVQAFLNAIDRNALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG V I+TP++ R +K R D
Sbjct: 181 GWGSDVIILTPSKRVHREVKTRQD 204
>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
Length = 207
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 128/205 (62%), Gaps = 2/205 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + GK+C A+A+D+RLG QT+ +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD+IG + +F +AGTA + L G CE KPDM DE+ + Q + S+ +RD S
Sbjct: 123 GAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYS 182
Query: 181 GWGGHVYIV-TPTEIKERILKGRMD 204
GWG HV I+ I + + RMD
Sbjct: 183 GWGAHVVILRRDGTISDTPISTRMD 207
>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
Length = 207
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + GK+C A+A+D+RLG QT+ + +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD+IG + +F +AGTA + L G CE KPDM DE+ + Q + S+ +RD S
Sbjct: 123 GAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYS 182
Query: 181 GWGGHVYIV 189
GWG HV ++
Sbjct: 183 GWGAHVVVL 191
>gi|56752759|gb|AAW24591.1| SJCHGC02212 protein [Schistosoma japonicum]
Length = 179
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 27/205 (13%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M + + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGM--------------------------SVYSLGPRLYVGFPGLATDN 34
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 35 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 94
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD IG A DFVV+GT E +YG CE +++ +M+ ELFE +SQ +L++++RD +
Sbjct: 95 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAI 154
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG VY++ + LK RMD
Sbjct: 155 SGWGARVYLIEKDAVTISDLKMRMD 179
>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
Length = 207
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 129/205 (62%), Gaps = 2/205 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + GK+C A+A+D+RLG QT+ +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD+IG + +F +AGTA + L G CEA KPDM +E+ + Q + S+ +RD S
Sbjct: 123 GAMDTIGCLDDCTNFQIAGTASDFLLGLCEAHIKPDMSEEEILPLMEQIIRSATNRDAYS 182
Query: 181 GWGGHVYIV-TPTEIKERILKGRMD 204
GWG HV ++ I + + RMD
Sbjct: 183 GWGAHVVVLRRDGTISDTPISTRMD 207
>gi|37779068|gb|AAP20194.1| proteasome subunit [Pagrus major]
Length = 140
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC A+A+DRR G+Q Q + TDFQ++ + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAVAADRRFGIQAQMVTTDFQKVFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKELAKDFVVAG 139
IC++D IG + +DFVV+G
Sbjct: 121 ICSLDLIGCPMVTEDFVVSG 140
>gi|160331191|ref|XP_001712303.1| prsB3 [Hemiselmis andersenii]
gi|159765750|gb|ABW97978.1| prsB3 [Hemiselmis andersenii]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 130/200 (65%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG +++ M GKNCFAIASD R G+ T +I KIH++LF+G+ GL D T+
Sbjct: 2 DYNGGSIIIMGGKNCFAIASDLRFGLDNFTKGQKTPKIFKIHEKLFLGMIGLFGDISTIR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q L ++ +Y L++ ++P F++++S LLY RF P+ + V+AGL ++++ FI + D
Sbjct: 62 QILEYKTSIYLLKKSERIQPLGFSNILSNLLYHHRFAPFLVETVLAGLDEKNRLFIESKD 121
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
+GAK DF G+ ESL G C +KP+M ++LF+T+S L+ ++R+C+SGWGG
Sbjct: 122 ILGAKSATSDFATIGSCSESLNGICGVFWKPEMNREDLFKTISSCLILGLNRNCISGWGG 181
Query: 185 HVYIVTPTEIKERILKGRMD 204
V++V+ + ++++ RMD
Sbjct: 182 IVHLVSIDGVTSKLIQTRMD 201
>gi|429964899|gb|ELA46897.1| hypothetical protein VCUG_01595 [Vavraia culicis 'floridensis']
Length = 205
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 127/202 (62%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I+++ G +++A+ GK+ I SD+RLG T++ R+ K+ DR+++G++ D Q
Sbjct: 4 ISKFYGGSVLALTGKDSAIIVSDKRLGNNSITVSMQHDRVYKMSDRVYVGMALFVPDIQM 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L ++L L+++ E R ++P+ F SL+S+ LY RF P + P++AG+ +++P+IC+
Sbjct: 64 LVRKLSKEVNLFEIGENRRIEPDEFCSLLSSTLYSNRFSPSYVDPIVAGIDVQNRPYICS 123
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MD +G + DF GTA + LYG EA++ P+M DELF Q L+++DRD LSGW
Sbjct: 124 MDLLGCQSTTNDFCAVGTAEDKLYGLAEALYTPNMNDDELFVAAMQIFLNAIDRDALSGW 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G +I++ + +R +K RMD
Sbjct: 184 GAEAHIISRNRVIKRTVKSRMD 205
>gi|198472849|ref|XP_002133126.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
gi|198139188|gb|EDY70528.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQL---QTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
G ++AM GK C AIA+D RLG Q IA DF+++ K+ R+F+GL+G D T++
Sbjct: 4 GGCVLAMQGKECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
RL +R LY+++E +M PE F +++S LLYE RFGPY Q V+A L +P+IC++
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D IGA FV G+ + L G CE ++ P+++P++LF T+SQ L + DR+ GWG
Sbjct: 124 DLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLDPEQLFLTMSQTLTHAFDRNITCGWG 183
Query: 184 GHVYIVTPTEIKERILKGRMD 204
V+++ +I ER++ R D
Sbjct: 184 ATVFVLDKDKIMERVIDVRKD 204
>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
Length = 207
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + G +C A+A+D+RLG QT+ + +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD+IG + +F +AGTA + L G CE KPDM DE+ + Q + S+ +RD S
Sbjct: 123 GAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYS 182
Query: 181 GWGGHVYIV 189
GWG HV ++
Sbjct: 183 GWGAHVVVL 191
>gi|303388305|ref|XP_003072387.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
gi|303301527|gb|ADM11027.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
Length = 206
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 132/202 (65%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I + G +++A+ AI +D+RLG+ T++ DF RI KI RL++GL D+Q
Sbjct: 5 IETFYGGSILAIASDEAVAIMNDKRLGMSSITVSKDFTRIHKIGPRLYVGLPVFVPDTQV 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + + + L++L E+R+M+PE S++S LLY KR PY P++AGL + KP+I
Sbjct: 65 LLRSIRKNYNLFKLEEQREMEPEELTSMISFLLYSKREAPYITSPIVAGLRSDGKPYISG 124
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MDSIG+ +DFV AGT+ E+L G CEA+++P M+ + LF T +QA L+S+DRD LSGW
Sbjct: 125 MDSIGSITSPRDFVAAGTSEENLMGICEALYRPGMDEENLFVTCTQAFLNSIDRDALSGW 184
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G YI++ ++ +R +KGR D
Sbjct: 185 GADCYIISRNKVTKRPIKGRCD 206
>gi|195161717|ref|XP_002021708.1| GL26359 [Drosophila persimilis]
gi|194103508|gb|EDW25551.1| GL26359 [Drosophila persimilis]
Length = 204
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQL---QTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
G ++AM G C AIA+D RLG Q IA DF+++ K+ R+F+GL+G D T++
Sbjct: 4 GGCVLAMQGNECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
RL +R LY+++E +M PE F +++S LLYE RFGPY Q V+A L +P+IC++
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D IGA FV G+ + L G CE ++ P+++P++LF T+SQ L + DR+ GWG
Sbjct: 124 DLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLDPEQLFLTMSQTLTHAFDRNITCGWG 183
Query: 184 GHVYIVTPTEIKERILKGRMD 204
V+++ +I ER++ R D
Sbjct: 184 ATVFVLDKDKIMERVIDVRKD 204
>gi|429962770|gb|ELA42314.1| hypothetical protein VICG_00714 [Vittaforma corneae ATCC 50505]
Length = 205
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 126/202 (62%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ + G +++AM G C +I SD RLG T + F+R+ KI DR+ +GL D+Q
Sbjct: 4 VGSFYGGSILAMAGDGCVSIVSDYRLGNGPITTSKSFRRVFKITDRIVLGLPFFIPDAQY 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L +++ L++L E RD++P+ A+L SA+LY R P + VIAG+ E+KP++C
Sbjct: 64 LLKKIEKHVSLFKLMEGRDIEPKECANLASAILYSHRRSPLYTTSVIAGIDSENKPYVCD 123
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MDS+G K +FV GTA +L G CEA+++ DM+ ++LF T QA L++VDR+ LSGW
Sbjct: 124 MDSLGCKTEPGNFVAEGTASTNLIGLCEALYREDMDEEDLFTTSIQAFLNAVDRNALSGW 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G I++P + R +KGR D
Sbjct: 184 GAECIILSPGKCVVRSVKGRCD 205
>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
Length = 205
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
IT Y+G A+V M GK C AIA+D R G++ Q + +F ++ +++ G +GL +D QT
Sbjct: 5 ITYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQT 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
+ +++ + LY+LRE D+ PE + + +LY+KRF PY+ P+IAG+ D ++C+
Sbjct: 65 MAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCS 124
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
D IG+ E+++ V GT L G C++ +K MEP+EL E V Q LL++ +RD SGW
Sbjct: 125 YDYIGSPEISRVGCV-GTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAFSGW 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G VY++T + +K R D
Sbjct: 184 GVEVYLLTRDNLTIYNMKPRQD 205
>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407034951|gb|EKE37462.1| proteasome subunit beta type 3, putative [Entamoeba nuttalli P19]
gi|449704564|gb|EMD44784.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 205
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I+ Y+G A+V M GK C AIA+D R G++ Q + +F ++ +++ G +GL +D QT
Sbjct: 5 ISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQT 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
+ +++ + LY+LRE D+ PE + + +LY+KRF PY+ P+IAG+ D ++C+
Sbjct: 65 MAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCS 124
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
D IG+ E+++ V GT L G C++ +K MEP+EL E V Q LL++ +RD SGW
Sbjct: 125 YDYIGSPEISQVGCV-GTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAFSGW 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G VY++T + +K R D
Sbjct: 184 GVEVYLLTRDNLTIYNMKPRQD 205
>gi|238585089|ref|XP_002390764.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
gi|215454558|gb|EEB91694.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
Length = 145
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 107/145 (73%), Gaps = 6/145 (4%)
Query: 66 RLVFRHK--LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED----KPF 119
R +FR++ +Y ++EER+++PETFA LVS+ LYE+RFGP+F +PV+AG+S KPF
Sbjct: 1 RKLFRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPFFIEPVMAGMSKTPSGGLKPF 60
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I D IG AKDFVVAGTA LYG E +++PD+EP++LFET+SQ +L++VDRD
Sbjct: 61 IAATDLIGCLNFAKDFVVAGTASSKLYGVAEGLWEPDLEPEDLFETISQTMLNAVDRDAY 120
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
SGWG V+++T ++ R LKGRMD
Sbjct: 121 SGWGVQVHVITKDKVISRTLKGRMD 145
>gi|212537589|ref|XP_002148950.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068692|gb|EEA22783.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 171
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++G++GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTM 123
++ +Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGF 125
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
DSIG + AKDF+V+GTA + L+G CE +++PD+
Sbjct: 126 DSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDL 159
>gi|402467005|gb|EJW02389.1| hypothetical protein EDEG_03183 [Edhazardia aedis USNM 41457]
Length = 204
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 128/204 (62%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI+ + G +++A+ +N A +D RLG T + +F +I KI +LF+GL D+
Sbjct: 1 MSISTHYGGSVLAVKSRNSIAFLTDLRLGQGNFTTSMNFPKIHKITSKLFVGLPQFIPDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L ++++ H L+ L E R M+PE ++VS +LY +RF P F PVIAG + +P++
Sbjct: 61 QFLLKKIIKNHNLFVLNENRPMEPEELTNMVSYILYSRRFTPLFTSPVIAGFNKFGEPYV 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD IG + +DFVV+GTA +L G CEA+++ D+E ++LF QA +++DRD LS
Sbjct: 121 SGMDQIGCLDEPEDFVVSGTAERNLAGMCEALWQKDLEGEDLFVMAVQAFANAIDRDALS 180
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
GWG +++ ++ +R ++ R+D
Sbjct: 181 GWGIEGFLIQNEKVLQRRVRMRLD 204
>gi|341885035|gb|EGT40970.1| hypothetical protein CAEBREN_25310 [Caenorhabditis brenneri]
Length = 223
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 104/150 (69%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACE 150
C MD+IG +DFV GT E L G CE
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCE 150
>gi|300707553|ref|XP_002995980.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
gi|239605230|gb|EEQ82309.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
Length = 205
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 124/202 (61%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I EY G +++AM+GK+ +I +D+RLG ++ +F ++ +++RLF G +GL +D++
Sbjct: 4 IAEYYGGSILAMIGKSSVSIVTDKRLGAGPISVGKNFTKVYTLNNRLFFGFTGLVSDAEI 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
LY+++ + L+ +RDM+P ++L+S +LY+KR PY+ ++ G++ ++KP+ +
Sbjct: 64 LYKKIRKNYNLFVQDNKRDMEPSELSNLISFILYQKRLQPYYVSTIVCGITSDNKPYASS 123
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MD IGA + +F GTA +L G EA+F DME ++LF T Q L+S DRD G
Sbjct: 124 MDCIGAMKETDEFATVGTASNNLMGLSEALFYADMEDEDLFTTSVQVFLNSSDRDTFGGM 183
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G +++ K+R GR D
Sbjct: 184 GFECFLINHEGYKKREFVGRCD 205
>gi|269859513|ref|XP_002649481.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
gi|220067032|gb|EED44500.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
Length = 206
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 122/203 (60%), Gaps = 2/203 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I+ Y G +L+ M GKN I D+RLG+ T+ T+ I +I+ + FIGLSG D Q
Sbjct: 5 ISTYYGGSLLGMCGKNSVIIVGDKRLGMGNFTVNTERTSIHQINSKCFIGLSGFLPDCQK 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRF-GPYFCQPVIAGLSDEDKPFIC 121
L + KL++L E R ++ + +LVS +LY R GP + QP+I GL DKP+
Sbjct: 65 LISIITNHIKLFELNENRIIEIDEVKNLVSYVLYSYRTTGPLYLQPIIVGLDRNDKPYAI 124
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+MD +G E +V GTA +L G CEA++ DM+ D+LF QA +++VDRD LSG
Sbjct: 125 SMDCLGC-ETIYHYVSIGTAENNLTGICEALYIKDMDEDQLFTNAMQAFINAVDRDALSG 183
Query: 182 WGGHVYIVTPTEIKERILKGRMD 204
WG +I+TP+++ +R +K R D
Sbjct: 184 WGAECFIITPSKVIQRKVKSRCD 206
>gi|195111614|ref|XP_002000373.1| GI22558 [Drosophila mojavensis]
gi|193916967|gb|EDW15834.1| GI22558 [Drosophila mojavensis]
Length = 203
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 127/199 (63%), Gaps = 2/199 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++AM GK+C AI++DRR + T +F++I + RL+IGL+GL TD T+ QR
Sbjct: 6 NG-CVIAMRGKDCVAISTDRRFCLPSYTAGEEFEKIFNLAPRLYIGLTGLQTDILTVQQR 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
LV R Y++ + P+ L+S +LYE RF P++ +P+IAG+ +P++ +MD
Sbjct: 65 LVHRRHAYEVNTGSLITPKILTELLSQMLYEHRFAPFYVEPIIAGMDPYTLEPYVSSMDL 124
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + DFVV GT + + G CE+++ P+++ D LFE +S+A ++S RD +SG+G
Sbjct: 125 LGCTIDSPDFVVVGTCTDQMLGTCESLWHPNLDSDGLFEAISRASVASGGRDIISGYGAR 184
Query: 186 VYIVTPTEIKERILKGRMD 204
VY++ ++ R+++ RMD
Sbjct: 185 VYLIEHDKVTVRLIRTRMD 203
>gi|383127955|gb|AFG44635.1| hypothetical protein CL406Contig2_01, partial [Pinus taeda]
Length = 86
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/86 (86%), Positives = 81/86 (94%)
Query: 30 VQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFAS 89
VQLQTIATDFQRI KIHD+L++GLSGLATD QTLYQR FRHKLYQLREER+M+PETFAS
Sbjct: 1 VQLQTIATDFQRIFKIHDKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFAS 60
Query: 90 LVSALLYEKRFGPYFCQPVIAGLSDE 115
LVSALLYEKRFGPYFCQPVIAGL ++
Sbjct: 61 LVSALLYEKRFGPYFCQPVIAGLGED 86
>gi|330039045|ref|XP_003239771.1| 26S proteasome SU [Cryptomonas paramecium]
gi|327206696|gb|AEA38873.1| 26S proteasome SU [Cryptomonas paramecium]
Length = 201
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 120/200 (60%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
Y G +VAM GK C A+A D R G + T RI KI+ ++ IG++GL D ++
Sbjct: 2 NYTGGCVVAMGGKKCIALACDLRFGNEYFTCGCATPRIFKINKKVIIGMTGLFGDISSVK 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q L ++ L+ + ++ +++S LLY+KRF P F + ++ GL +E +P I +MD
Sbjct: 62 QDLEYKMSLHSFEKNLSVQFFNICNILSNLLYQKRFCPLFLENIVCGLDEEFEPTITSMD 121
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
+G+ + +F + GT ++LYG CE +KP ++ ELFE + L+++ +R+CLSGWG
Sbjct: 122 ILGSSVFSSNFAIVGTCNQNLYGLCEMFWKPGLDFTELFEIIVHCLITASNRNCLSGWGC 181
Query: 185 HVYIVTPTEIKERILKGRMD 204
V I++P I +I+K ++D
Sbjct: 182 MVKIMSPNGIVTKIIKTKVD 201
>gi|449673686|ref|XP_002167313.2| PREDICTED: proteasome subunit beta type-3-like, partial [Hydra
magnipapillata]
Length = 142
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
Query: 69 FRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
FR LY+LRE R + P+ F +++S +LY +RFGPYF +P+IAGL + ++P+I + D IG
Sbjct: 6 FRTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPYIASCDLIG 65
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+DFVV+GT G+ LYG CE++++PD+EP+ LFE +SQALL++ DRDCLSGWG V+
Sbjct: 66 CPCEPEDFVVSGTCGDQLYGMCESLWEPDLEPEALFEVISQALLNAQDRDCLSGWGAVVH 125
Query: 188 IVTPTEIKERILKGRMD 204
I+ +I + LK RMD
Sbjct: 126 IIEKDKITTKTLKARMD 142
>gi|241614198|ref|XP_002406585.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215500837|gb|EEC10331.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 140
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Query: 48 RLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP 107
+L+ GLSGLATD QT+ QRL FR +Y+LRE R +KP+TF+S+VS +LYE+RFGPYF +
Sbjct: 4 KLYCGLSGLATDVQTVAQRLKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYFTEA 63
Query: 108 VIAGLSD-EDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETV 166
+IAGL ++P+I + D IG +DFVV+GT E +G CEA+++PD+ PDELFE +
Sbjct: 64 LIAGLDPITNEPYIASTDLIGCISEPEDFVVSGTCEEQCFGMCEALWEPDLGPDELFEVI 123
Query: 167 SQALLSSVDRDCLS 180
SQAL+++ DRD S
Sbjct: 124 SQALVNAFDRDASS 137
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI Y+G + M GKNC A+A+D R G++ Q +++F ++ ++++ +G G+ D Q
Sbjct: 4 SIDNYSGGIAIGMCGKNCVALAADNRYGLRYQFASSNFHKVFQLNEHCLVGGCGVYADVQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+++++ + LY+LRE R + P + + LL+ KRF PY+ P+I G D K +
Sbjct: 64 TVFEQIKYDANLYKLREGRPIGPSQLVNATAHLLFSKRFNPYYMSPIIIGFDDNGKTYCS 123
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+ D IGA + F GT G C++ +K DMEP+EL ET+ Q LL+ +RD SG
Sbjct: 124 SYDYIGAPGDYR-FAAVGTGCNEAMGVCDSFYKEDMEPEELVETIGQCLLAGENRDAFSG 182
Query: 182 WG 183
WG
Sbjct: 183 WG 184
>gi|240281173|gb|EER44676.1| proteasome component PUP3 [Ajellomyces capsulatus H143]
Length = 140
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ F +I ++GL+GLATD ++ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIGAKELA 132
Y+LREER + P+T A+L+S+ LYEKRFGPYF PV+AG+ S KPFIC DSIG + A
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFA 120
Query: 133 KDFVVAGTAGESLYGAC 149
KDF+V+GTA + L+G C
Sbjct: 121 KDFIVSGTASDQLFGTC 137
>gi|219119376|ref|XP_002180450.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407923|gb|EEC47858.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 227
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 122/226 (53%), Gaps = 28/226 (12%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +L+AM GK+C A+A DRR G + + + L +G +G+ D Q+L Q
Sbjct: 2 NGGSLLAMAGKDCVALAVDRRFGSGPALVNVGPRSVLAPSSLLLVGFTGMEGDVQSLKQE 61
Query: 67 LVFR-HKLYQ-------LREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL------ 112
L + + YQ +R + P + SL S +LY ++ PYF +P++ GL
Sbjct: 62 LAAQVARKYQRGMGISGTENQRFISPRSMTSLTSHVLYNRKRAPYFVEPLVIGLEPCVSE 121
Query: 113 -------SDED-------KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDME 158
SD +P++C++D IGA L+ +FV AG A +S+YG EA ++P++
Sbjct: 122 KKMSPISSDATVNSTTAYRPYLCSLDMIGATSLSNEFVCAGAAIKSIYGTAEAAYQPNLS 181
Query: 159 PDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
DEL E +A LS+++RDCLSG+G VY++T I L+GR D
Sbjct: 182 GDELVEACGKAFLSALERDCLSGYGAVVYLITSDGIVAYELEGRND 227
>gi|339243107|ref|XP_003377479.1| proteasome subunit beta type-3 [Trichinella spiralis]
gi|316973717|gb|EFV57276.1| proteasome subunit beta type-3 [Trichinella spiralis]
Length = 139
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDS 125
+++R +Y LRE RD+ PE F+ ++S LLYE RF PYFC+PV+AG+ +P++ MD
Sbjct: 1 MLYRTSIYNLRENRDVTPEVFSQMLSNLLYENRFSPYFCEPVVAGIDWKTSEPYVANMDL 60
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG DFV++GT +YG CE++++ +M+ D FE +QALL+ ++RD SGWG
Sbjct: 61 IGCICKPNDFVLSGTGDLQMYGMCESVWEKNMDRDAAFEATAQALLACIERDAASGWGAV 120
Query: 186 VYIVTPTEIKERILKGRMD 204
VY ++ EI + +K R+D
Sbjct: 121 VYTISNDEIDVKSIKARLD 139
>gi|294889351|ref|XP_002772769.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239877319|gb|EER04585.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 129
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDSQTL
Sbjct: 2 EYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQTL 61
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI
Sbjct: 62 SQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFI 118
>gi|390463598|ref|XP_003733064.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-3
[Callithrix jacchus]
Length = 116
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGP-YFCQPVIAGL 112
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGP Q ++ G+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPTTLSQSLLGGI 113
>gi|410051479|ref|XP_511441.4| PREDICTED: proteasome subunit beta type-3 [Pan troglodytes]
Length = 168
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 106/200 (53%), Gaps = 52/200 (26%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT+ QRL FR LY+L+E R +KP T S ++A L
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMS------------------MVANL-------- 94
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
LY +PD LFET+SQA+L++VDRD +S
Sbjct: 95 ------------------------LYEKRXXXXXXXXDPDHLFETISQAMLNAVDRDAVS 130
Query: 181 GWGGHVYIVT--PTEIKERI 198
G G V+I+T P + +E +
Sbjct: 131 GMGVIVHIMTSCPHDCQEEM 150
>gi|390369126|ref|XP_001197881.2| PREDICTED: proteasome subunit beta type-3-like
[Strongylocentrotus purpuratus]
Length = 99
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 76/99 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM+GK+C IASDRR GVQ QT++ + Q+I + RL++GLSGLATD
Sbjct: 1 MSIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
T+ RL FR LY LRE RD+KPETF S+VS LLYE+R
Sbjct: 61 TTVSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYERR 99
>gi|224006550|ref|XP_002292235.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971877|gb|EED90210.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 184
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 108/188 (57%), Gaps = 8/188 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIAT---DFQRISKIHDRLFIGLSGLATDSQT 62
+NG +++AM G+N AIA D R G+ +QTIAT D S + R+ + L +
Sbjct: 1 FNGGSILAMSGRNSVAIAIDARFGLGMQTIATMNTDNDDASDGNPRIVL----LPNSNTL 56
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFIC 121
L ++ + E M P LVS LLY +R PY+ +PV+ GL + P++
Sbjct: 57 LAWTGLYGDGISFAEEMNKMSPRAITMLVSHLLYRRRSAPYYVEPVVVGLENVRVPPYLV 116
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
T D +GA+ + FV +G A SL+G EA+++P++E +EL E +A +S+++RDCLSG
Sbjct: 117 TTDMLGAQSTSTSFVCSGVASRSLHGTAEALWRPNLEGEELVEVCGRAFVSALERDCLSG 176
Query: 182 WGGHVYIV 189
+G VY++
Sbjct: 177 YGAVVYLI 184
>gi|148684144|gb|EDL16091.1| mCG13231, isoform CRA_a [Mus musculus]
Length = 112
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 79/109 (72%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVI 109
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKR +P +
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRIQNTCLKPFL 109
>gi|149054058|gb|EDM05875.1| rCG33987, isoform CRA_b [Rattus norvegicus]
Length = 112
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 79/109 (72%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVI 109
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKR +P +
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRIQSTCLRPFL 109
>gi|444732722|gb|ELW72997.1| Glutamate decarboxylase 2 [Tupaia chinensis]
Length = 312
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 101/184 (54%), Gaps = 50/184 (27%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+ AIA+DRR G+Q+Q + TDFQ+I + DRL +GLA
Sbjct: 1 MSIMSYNGGAIMAMKGKSYVAIAADRRFGIQVQMVTTDFQKIFPMGDRL----NGLA--- 53
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Y+ + VIAGL + KPF
Sbjct: 54 ------------------------------------------YYTETVIAGLDPKTFKPF 71
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
IC +D IG + DFVV+GT E +YG CE++++P M+P+ LFET+SQA+L++VD D +
Sbjct: 72 ICCLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPIMDPEYLFETISQAMLNAVDWDAV 131
Query: 180 SGWG 183
SG G
Sbjct: 132 SGMG 135
>gi|297790070|ref|XP_002862946.1| hypothetical protein ARALYDRAFT_920955 [Arabidopsis lyrata subsp.
lyrata]
gi|297308728|gb|EFH39205.1| hypothetical protein ARALYDRAFT_920955 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 77/129 (59%), Gaps = 40/129 (31%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+ I EYN SA+ AM GKNCFAIASD+R GVQLQTI
Sbjct: 6 IQIFEYNESAVDAMEGKNCFAIASDQRHGVQLQTI------------------------- 40
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
LREERD+KPETFASLVSA+LYEKRFGPY CQ VIA L D++KPF
Sbjct: 41 ---------------LREERDIKPETFASLVSAILYEKRFGPYLCQLVIAELRDDNKPFT 85
Query: 121 CTMDSIGAK 129
CTMDSI AK
Sbjct: 86 CTMDSIAAK 94
>gi|390346295|ref|XP_003726518.1| PREDICTED: proteasome subunit beta type-3-like [Strongylocentrotus
purpuratus]
Length = 123
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 99 RFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
+FGPYF +PVIAGL + KPFIC +D IG DFVVAGT E LYG CE+++ PD+
Sbjct: 17 KFGPYFIEPVIAGLDPKTYKPFICNLDLIGCPMFTDDFVVAGTCTEQLYGMCESVWVPDL 76
Query: 158 EPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
PD+LFET+SQ LL++VDRD L+GWG V+I+ ++ R +K RMD
Sbjct: 77 APDDLFETLSQGLLNAVDRDALAGWGVVVHIIEKDKVTTREVKARMD 123
>gi|297791977|ref|XP_002863873.1| hypothetical protein ARALYDRAFT_917696 [Arabidopsis lyrata subsp.
lyrata]
gi|297309708|gb|EFH40132.1| hypothetical protein ARALYDRAFT_917696 [Arabidopsis lyrata subsp.
lyrata]
Length = 94
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 77/129 (59%), Gaps = 40/129 (31%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+ I EYN SA+ AM GKNCFAIASD+R GVQLQTI
Sbjct: 6 IQIFEYNESAVDAMEGKNCFAIASDQRHGVQLQTI------------------------- 40
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
LREERD+KPETFASLVSA+LYEKRFGPY CQ VIA L +++KPF
Sbjct: 41 ---------------LREERDIKPETFASLVSAILYEKRFGPYLCQLVIAELGEDNKPFT 85
Query: 121 CTMDSIGAK 129
CTMDSI AK
Sbjct: 86 CTMDSIAAK 94
>gi|361126076|gb|EHK98092.1| putative proteasome component PUP3 [Glarea lozoyensis 74030]
Length = 135
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 99/185 (53%), Gaps = 54/185 (29%)
Query: 20 FAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREE 79
F+I D RLG+Q T++ +F +I D +++GL+GLATD T+ ++ +Y+LREE
Sbjct: 5 FSITCDLRLGLQALTVSNNFPKIFSYGD-VYLGLTGLATDVSTVSDLFRYKVNMYRLREE 63
Query: 80 RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
R++ P T A+LVS+ LYEKRFGPYF G ++L
Sbjct: 64 RNISPSTMANLVSSSLYEKRFGPYF----------------------GPEDL-------- 93
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERIL 199
FET+SQALL++VDRD LSGWG HVY++ ++ +R+L
Sbjct: 94 -----------------------FETISQALLNAVDRDALSGWGAHVYVIEKDKVTKRLL 130
Query: 200 KGRMD 204
KGR D
Sbjct: 131 KGRQD 135
>gi|356519025|ref|XP_003528175.1| PREDICTED: uncharacterized protein LOC100798029 [Glycine max]
Length = 853
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 62/84 (73%), Gaps = 12/84 (14%)
Query: 99 RFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM- 157
RFGPYFCQPVIAGL DEDKPFI TMD +GAKELAKDFVV+GTA ESLYGACEAMFKPDM
Sbjct: 729 RFGPYFCQPVIAGLGDEDKPFIYTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDML 788
Query: 158 -----------EPDELFETVSQAL 170
+P FE V + L
Sbjct: 789 RTSGLRFHKGFDPHGQFEAVRETL 812
>gi|149731672|ref|XP_001503282.1| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 168
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 100/171 (58%), Gaps = 5/171 (2%)
Query: 35 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
+ TD Q+I + + L I L+GLAT+ QT Q L F+ L +L E +KP T S+++ L
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 95 LYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMF 153
LY+K+FGP + +PVIA L + PF+C++D I + DFVV+ T E + G CE++
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVVTDDFVVSSTCAEQMCGMCESL- 120
Query: 154 KPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
L ETVSQA+L++VD D + H ++ + RILK +MD
Sbjct: 121 --GAHHAHLLETVSQAMLNAVDGDA-ARCKSHFHLAEEDKTTTRILKAQMD 168
>gi|324537662|gb|ADY49511.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 130
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Query: 88 ASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIGAKELAKDFVVAGTAGESLY 146
A+++S LLY+ RFG Y +P++AGL +K +IC MD+IG KDFV GT E L
Sbjct: 13 ATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAYICGMDTIGCIAAPKDFVAVGTGTEYLL 72
Query: 147 GACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
G CE + +M DELFE +Q++LS+++RD SGWG +Y +T ++ + +K RMD
Sbjct: 73 GVCEGFWHENMNADELFEATAQSMLSAMERDAASGWGVLIYTITKNKVNIKTIKARMD 130
>gi|323455458|gb|EGB11326.1| hypothetical protein AURANDRAFT_52492 [Aureococcus anophagefferens]
Length = 229
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 114/203 (56%), Gaps = 8/203 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y+G +++AM GK A+ D+RLG + + R+ + R + L GL D QTL +
Sbjct: 23 YHGGSVLAMAGKKSVALVLDKRLGQGNALVGDEACRVLECGPRAVLALRGLQGDVQTLLE 82
Query: 66 RLVFRHKLYQLREERDM--KPETFASLVSALLYEKRFGP----YFCQPVIAGLSDEDKPF 119
+ + +L +L E +P+ ++LVS +LY R Y +PVI GL + P+
Sbjct: 83 DVDAKLRLRRLEEGPSAASEPKAVSALVSVMLYGGRLSGGAPGYAVEPVICGLGADGAPY 142
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+C D +GA+ ++ FVVAGTA SLYGACEA F+ D+E D L + A+ + +DRDCL
Sbjct: 143 LCAQDGLGARMVSDTFVVAGTAASSLYGACEATFEADLEGDALLDAALAAMAAGLDRDCL 202
Query: 180 SGWGGHVYIVT--PTEIKERILK 200
SG V+++T T ER L+
Sbjct: 203 SGREVVVHVITRDGTTSMERTLE 225
>gi|195037993|ref|XP_001990445.1| GH19348 [Drosophila grimshawi]
gi|193894641|gb|EDV93507.1| GH19348 [Drosophila grimshawi]
Length = 200
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 106/196 (54%), Gaps = 7/196 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+Y +++AM GK+C AIA V+ I + + K+ RL++GL+G D Y
Sbjct: 6 DYCNGSIIAMHGKDCVAIA------VKGGNINDSNKNLYKLGARLYLGLTGRLADILMAY 59
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTM 123
+ L+ R +++L + R++ P+ ++S LLY R P+ + VI G+ D +P IC++
Sbjct: 60 KHLILRKNIFELEKNRELLPKELTLILSQLLYAHRLVPFQIEAVIVGMDPDTLEPHICSL 119
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
IG + KDFVVAG L G C+++++P + P +L++T+ Q ++ G G
Sbjct: 120 GMIGYPNVTKDFVVAGHRHGPLLGLCKSLWRPSLNPSQLYDTIGQTMIQFCTSYISVGCG 179
Query: 184 GHVYIVTPTEIKERIL 199
+ ++ +I ER L
Sbjct: 180 VDICLIEKYKITERSL 195
>gi|389612013|dbj|BAM19540.1| proteasome beta3 subunit [Papilio xuthus]
Length = 96
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 73/92 (79%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG A+VAM G++C AIA+D+R G+Q QTI+T+F ++ ++ L++GL GLATD+
Sbjct: 1 MSXLAYNGGAVVAMKGQDCVAIATDKRFGIQAQTISTNFPKVYQMGPTLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVS 92
QT++QRL FR LY+L+E R M+P+TF++++S
Sbjct: 61 QTVFQRLKFRMNLYELKENRVMRPKTFSAMLS 92
>gi|443896401|dbj|GAC73745.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Pseudozyma antarctica T-34]
Length = 99
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 74/99 (74%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ +IGL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
TL +R +R +Y+++EER+++PE FA+LVS+ LYE+R
Sbjct: 61 STLRERFRYRVNMYKMKEEREIEPEIFANLVSSTLYERR 99
>gi|70937358|ref|XP_739497.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516540|emb|CAH84497.1| hypothetical protein PC301073.00.0 [Plasmodium chabaudi chabaudi]
Length = 128
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 13/128 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E +M + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYL 120
Query: 121 CTMDSIGA 128
D IGA
Sbjct: 121 NAYDLIGA 128
>gi|162605862|ref|XP_001713446.1| 26S proteasome SU [Guillardia theta]
gi|13794378|gb|AAK39755.1|AF083031_112 26S proteasome SU [Guillardia theta]
Length = 200
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G +VA++GK+ IASD G Q+I K+H+ + IG+ GL D + L
Sbjct: 5 GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEIL 64
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ + +E++ M+P SL+S LLY+KRF PY + ++AG ++ KPF+ T+D IG
Sbjct: 65 EYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTVDCIG 124
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
A ++ G E+++ + +++P M+ EL VS+++ R+C S V
Sbjct: 125 AISYISNYACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSMKVGNRRNCYSSKNSTVM 184
Query: 188 IVTPTEIKERILK 200
I IK +I K
Sbjct: 185 IYN---IKYKICK 194
>gi|344243208|gb|EGV99311.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 95
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 67/95 (70%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M I YNG A++A+ GKNC AIA DRR G+Q Q + TDFQ+I I DRL+IGL+ LAT
Sbjct: 1 MYIMSYNGGAVMALKGKNCVAIAVDRRFGIQAQMVTTDFQKIFPIGDRLYIGLAVLATYV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALL 95
QT+ QRL F LY+L+E R +KP T S+V+ LL
Sbjct: 61 QTVAQRLKFLLNLYELKEGRQIKPYTLTSMVANLL 95
>gi|431839032|gb|ELK00961.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 140
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 89 SLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYG 147
S+V+ LYEK FGPY+ +PVI GL + KPFIC++D IG + +FVV GT + Y
Sbjct: 2 SVVAKFLYEKCFGPYYTEPVICGLDPKSFKPFICSLDLIGCPMVTDNFVVRGTYTKQKYM 61
Query: 148 ACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
C+++++ M+P+ LFE +SQ + +++D+D SG G V+I +I +ILK RMD
Sbjct: 62 MCKSIWEISMDPEHLFEAISQVMPNAMDQDVESGMGVIVHISEEDKITTKILKARMD 118
>gi|198468365|ref|XP_002134014.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
gi|198146380|gb|EDY72641.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
Length = 198
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI G ++VAM G C AIA+D + + D+ + ++H +++ LSG D
Sbjct: 3 SIASILGGSVVAMAGNECVAIATDHIILHDGEKYDYDYGNLFQVHPYIYVALSGCEQDII 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
+ R++ R ++ ++ PE +A +S L E R PY + V+AGL+ E +PFI
Sbjct: 63 RVRNRMLLRQNMFG-----NVTPEIYAKNLSNYLKEPRLKPYQIESVVAGLNTETVEPFI 117
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
C ++ G ++DF +G S+ C+A++KPD++P +L +S +++ D
Sbjct: 118 CGVNGSGELLNSEDFSASGKC-PSIGTMCKALWKPDLKPTDLLAVISDSIMEGSDLKGAD 176
Query: 181 GWGGHVYIVTPT 192
WG +Y++ T
Sbjct: 177 CWGATIYVLHKT 188
>gi|195373979|ref|XP_002046043.1| GM19273 [Drosophila sechellia]
gi|194123230|gb|EDW45273.1| GM19273 [Drosophila sechellia]
Length = 82
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%)
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
MD IG DFVVA T E LYG CE ++KPD+EPD+LFE ++Q+++++ DRD +SGW
Sbjct: 1 MDLIGCPNAPDDFVVARTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGW 60
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G VYI+ +I ER LK RMD
Sbjct: 61 GATVYIIEKDKITERTLKTRMD 82
>gi|195165827|ref|XP_002023740.1| GL19755 [Drosophila persimilis]
gi|194105874|gb|EDW27917.1| GL19755 [Drosophila persimilis]
Length = 198
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ G ++VAM G C AIA+D + + D+ + ++H +++ LSG D
Sbjct: 3 SVASILGGSVVAMAGNECVAIATDHIILHDGENYDFDYGNLFQVHPYIYVALSGCEQDII 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFI 120
+ R++ R ++ ++ PE +A +S L E R PY + V+AGL +D +PFI
Sbjct: 63 RVRNRMLLRQNMFG-----NVTPEIYAKNLSNYLKEPRLKPYQVESVVAGLNTDTVEPFI 117
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGA-CEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
C ++ G ++DF +G L G C+A++KPD++P L +S +++ D
Sbjct: 118 CGVNGSGELLNSEDFSASGKC--PLIGTMCKALWKPDLKPSGLLAVISDSIMGGSDLKGA 175
Query: 180 SGWGGHVYIVTPT 192
WG +Y++ T
Sbjct: 176 DCWGATIYVLHKT 188
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M +Y G+ + ++ +A++RR + + D Q+I +I D + ++G D
Sbjct: 2 MEDKQYKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGDG 61
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + L KL++LR M + L+S +L E R+ PY+ Q +I GL D+ P I
Sbjct: 62 QRLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGL-DKAGPKI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
++D +G + + FV G+ YG E +KP M +E E ++AL S++ RD S
Sbjct: 121 YSLDPLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGMSVEEGVELAARALESAMKRDSAS 180
Query: 181 GWGGHVYIVTPT--EIKER 197
G G ++T EI ER
Sbjct: 181 GNGMQFCVITAEKFEIFER 199
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 1/184 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V +A+++R + + +++ +I DR+ + ++G D+Q L +
Sbjct: 10 TGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLARI 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ LYQ+R R++ ++L+S L + R+ PY+ Q ++ G+ D+ P + ++D++
Sbjct: 70 ITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGI-DDHGPSVYSVDAM 128
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +D V G+ YG E ++P M DE E +AL S++ RD SG G HV
Sbjct: 129 GGATKEEDIVSTGSGSPMAYGVLEDRYRPGMNEDEAVELAVRALRSAMKRDAGSGEGIHV 188
Query: 187 YIVT 190
++T
Sbjct: 189 VVIT 192
>gi|223974055|gb|ACN31215.1| unknown [Zea mays]
Length = 53
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 152 MFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
M+KPDM+PDELFET+SQAL SSVDRDCLSGWGG+V IVTPTE++E ++K RMD
Sbjct: 1 MYKPDMQPDELFETISQALNSSVDRDCLSGWGGYVLIVTPTEVREHVIKSRMD 53
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E G+ + ++ K+ +A+D+R + + ++I KI D L + ++G D+Q+L
Sbjct: 2 EMKGTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKIDDNLALTIAGSVGDAQSLV 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L KLY++R + M P +L+S +L+ R+ P+ Q ++ G DE + ++D
Sbjct: 62 RYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGF-DEKGFKLYSLD 120
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
+G KDF G+ YG EA +K DM+ + V +AL ++++RD SG G
Sbjct: 121 PLGGVNEEKDFTATGSGSPIAYGVLEAGYKKDMDYKKGVSLVLKALQAAMERDTFSGNGV 180
Query: 185 HVYIVTPTEIK 195
+ ++T +K
Sbjct: 181 SLALITKDGVK 191
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Query: 5 EYN-GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYN G+ V + K+ +A+++R+ ++++ +++ ++DR+ I +G+ D QTL
Sbjct: 4 EYNVGATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIADMQTL 63
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L K+Y+L +R A L+S +++ +R+ P+ + ++ G DE+ P + +
Sbjct: 64 AKILRVNAKMYELDAKRKPSVAAMAKLLSIIMFNRRWMPFIAEVLVGGY-DEEGPHVFVL 122
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D +G+ + D+ GT + G ++ +K D++ E + A+ ++++RD +SG G
Sbjct: 123 DPVGSL-IEDDYAALGTGAKMAIGILDSGYKKDIDVVEARKLAINAIRAALERDPVSGGG 181
Query: 184 GHVYIVTPTEIKERILK 200
+ I+TPTE +E +K
Sbjct: 182 IDLVIITPTETREEEVK 198
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 1 MSITE---YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLA 57
MS+ E Y G+ V +V K+ +A+++R + + ++I +I DR+ + +G
Sbjct: 1 MSMIEEKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSV 60
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D+Q L + + LY++R ER A+L S LL R+ PY Q +I G+ E K
Sbjct: 61 GDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK 120
Query: 118 PFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
I ++D IG KD V G+ + YG E F P++ DE E +A+ S++ RD
Sbjct: 121 S-IYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRD 179
Query: 178 CLSGWGGHVYIVTPTE 193
SG G V +T E
Sbjct: 180 SASGDGIDVVKITEDE 195
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 97/188 (51%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRAL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +LY++R +++ P A+L+S +L+ R P+ Q +I G D P + ++D +G
Sbjct: 66 IAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPLG 125
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
K F G+ YG EA + DM +E + +AL S+++RD SG G V
Sbjct: 126 GMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAMERDTYSGNGVSVA 185
Query: 188 IVTPTEIK 195
++T +K
Sbjct: 186 VITKEGVK 193
>gi|19070763|gb|AAL83984.1| proteasome subunit [Oryza sativa]
Length = 52
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 49/52 (94%)
Query: 153 FKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+KP MEP+ELFET+SQAL +SVDRDCLSGWGG+V +VTPTE++ER++KGRMD
Sbjct: 1 YKPSMEPEELFETISQALQASVDRDCLSGWGGYVLLVTPTEVQERVIKGRMD 52
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +V + N +A+++R+ + + ++ + D + +G+ D Q L +++
Sbjct: 8 GATVVGISYNNGVILAAEKRVSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLVRQV 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ +L RD+ P + A L+S +++E+R+ P Q ++ G++ KP I T+D +G
Sbjct: 68 EALAKIRKLETRRDVAPNSIAKLMSVIMFERRYFPLLTQVIVGGIN--TKPEIYTLDPLG 125
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L D+ GT E G +A FKP+M ++ E +A+ S++ RD SG G V
Sbjct: 126 SV-LPDDYAAVGTGAEMALGIMDAEFKPNMTEEKAKELAVRAIRSAIQRDAASGDGIDVL 184
Query: 188 IVTPTEIKERILKGR 202
+V+ T +E + R
Sbjct: 185 VVSRTGHREETIPIR 199
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M +Y G+ V ++ N A++RR + + D Q+I K+ D + + ++G D
Sbjct: 1 MDDKQYKGTTTVGIICNNGVVFATERRATMGTFIASRDAQKIYKLTDNIAMTIAGSVGDG 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + L KL++LR M + L+S +L E ++ P++ Q +I G+ D+ P I
Sbjct: 61 QRLARILQVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQVLIGGV-DKSGPRI 119
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
++D +G + F G+ YG E +KPD+ ++ E ++AL S++ RD S
Sbjct: 120 YSLDPLGGRIEEVKFSSTGSGSPIAYGVLEDRYKPDISVEQGVELAAKALESAMKRDSAS 179
Query: 181 GWGGHVYIVTPT--EIKER 197
G G ++T EI ER
Sbjct: 180 GNGMQFAVITHEKFEIFER 198
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K +A+++R+ T++T +++ ++DRL I +G+ D QTL + L
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L +R A L+S +++ +RF P+F + ++ G+ DE P + MD +G
Sbjct: 68 KLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEG-PHLIVMDPLG 126
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + ++ GT + +A +KPDM + + QAL ++++RD +SG G +
Sbjct: 127 SL-IEDNYAALGTGAKLAIAIIDASYKPDMSLQDAKKLAVQALKAALERDPVSGGGIDLV 185
Query: 188 IVTPTEIKERILK 200
++ +E +K
Sbjct: 186 VIDKNGAREEEVK 198
>gi|358338430|dbj|GAA56814.1| heterogeneous nuclear ribonucleoprotein L [Clonorchis sinensis]
Length = 873
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 118 PFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
P+I + D+IG +DFVVAGT+ E LYG CE +++ M P ELFE +SQ +L++VDRD
Sbjct: 160 PYIASTDNIGCISEPEDFVVAGTSTEQLYGMCETLWQKKMNPAELFECISQCILNAVDRD 219
Query: 178 CLSGWGGHVYIV 189
CL+GWG VY++
Sbjct: 220 CLAGWGARVYLI 231
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 98/188 (52%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + MV K+ +A+D+R + + +++ KI D + + ++G D+Q+L + +
Sbjct: 13 GTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLVRMI 72
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+Y++R +M P + A+L+S +L+ R P+ Q +I G + P + ++D +G
Sbjct: 73 SAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDNLHGPKLFSLDPVG 132
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
F G+ + G EA +K DM ++ E +AL+S+++RD SG G +
Sbjct: 133 GLNEETSFTSTGSGSPTALGVLEAEYKKDMTINKGKELAVKALISAMERDAYSGNGISLA 192
Query: 188 IVTPTEIK 195
++ +K
Sbjct: 193 VIDENGVK 200
>gi|294889359|ref|XP_002772773.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239877323|gb|EER04589.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 110
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + A DF+V+GTA E L G E+ ++ M P+EL E + Q+LLS +DRDCLSGWGG V
Sbjct: 33 GTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCLSGWGGMV 92
Query: 187 YIVTPTEIKERILKGRMD 204
YI+T E+ + LKGRMD
Sbjct: 93 YILTDKELITKTLKGRMD 110
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I D+L I +G+ D QTL + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L +R + A L+S +++ +RF P+F + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGI-DEEGPHLIVMDPLG 126
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + ++ GT + + ++PD+ +E + QAL ++++RD +SG G +
Sbjct: 127 SL-IEDNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGGGIDLA 185
Query: 188 IVTPTEIKE 196
IV +E
Sbjct: 186 IVDKNGARE 194
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V +A++RR + + +++ I D++ + ++G D+Q L + +
Sbjct: 11 GTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITDKIGMTIAGGVGDAQQLVRII 70
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY++R + + A+++S L + RF PY+ Q ++ G+ D P + ++D+ G
Sbjct: 71 NVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQLLVGGV-DTSGPSVYSVDAAG 129
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
L ++FV G+ + YG E FKP+M +E E +AL +++ RD SG G +V
Sbjct: 130 GATLEENFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRALRAAMLRDSASGEGYNVV 189
Query: 188 IVT 190
I+T
Sbjct: 190 IIT 192
>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
Length = 229
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G N IA+D R+ + D+ +I + D+ + SG D + L +
Sbjct: 20 NGGTCIAIAGSNYCVIAADTRMSTGYSILTRDYSKICNLADKCVMASSGFQADVKALQKN 79
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 80 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAV 139
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQALLSS 173
G+ E + GT G + + K P + P E + V S+
Sbjct: 140 GSYERV-GYGAQGTGGTLMMPVLDNQLKSPSPLLLPAQDATTPLSESEAVDLVKDVFASA 198
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G G + +V +K L+ R D
Sbjct: 199 AERDIYTGDGLEIVVVNAEGVKREFLELRRD 229
>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 195
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 5 GATAVGITFQDGIVLASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILTLQI 64
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 65 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGII--DKPILFTLDPLG 122
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L ++ GT E G + FKP+M +E + +A+ S+ RD SG G V
Sbjct: 123 S-VLPDEYAAVGTGAEMALGVLDPQFKPNMTQEEAIDLAKRAVRSAALRDSASGDGLDVL 181
Query: 188 IVTPTEIKE 196
++T IKE
Sbjct: 182 VITKDGIKE 190
>gi|397575659|gb|EJK49816.1| hypothetical protein THAOC_31273 [Thalassiosira oceanica]
Length = 362
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 78/279 (27%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT----DFQRISKIH---DRLFIGLSGL 56
T++NG +++AM G N AIA D R G+ QT+ + D IH + +GL
Sbjct: 84 TKFNGGSVLAMAGSNSVAIAVDTRFGLGFQTVHSLGDSDEGNPRIIHLPNSNTLMAWTGL 143
Query: 57 ATDSQTLYQRL-------------------------------VFRHKLYQLREER----- 80
D + + L + H LYQ R
Sbjct: 144 YGDGLSFSEELNMIMGRQFRNEQILSFPNTKRRITGPKSIAMLMSHLLYQRRNAPYYVEP 203
Query: 81 --------------------DMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE----- 115
+++ E +S + +++ R G + G S +
Sbjct: 204 VVVGLESVPIDEVRIDGAAGELRIEDSSSCLQSIIDIARRGQHLLTTTEDGASSQPARVI 263
Query: 116 -----DKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQAL 170
+PF+CT D +GA+ + FV +G A SLYG EA+++PD+ +EL E +A
Sbjct: 264 NRKRVQRPFLCTTDMLGAQSTSSSFVASGVASRSLYGTAEALWRPDLSGEELVEVCGRAF 323
Query: 171 LSSVDRDCLSGWGGHVYIVTPT-----EIKERILKGRMD 204
LS+++RDCLSG+G +Y++ T I E +L R D
Sbjct: 324 LSALERDCLSGYGVVIYLIEGTGDGDARIVEYVLDCRND 362
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ + +V + +A+++R + L + +++ ++ DR+ + +G D+Q L +
Sbjct: 10 KGTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVGDAQQLARI 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L LYQ+R R + A+L+S L + R+ PY+ Q ++ G+ DE P + ++D++
Sbjct: 70 LNVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYVQLLVGGV-DEKGPSVYSVDAM 128
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G ++ V G+ YG E +KP M + E + L S++ RD SG G HV
Sbjct: 129 GGATKEEEIVATGSGSPMAYGVLEDRYKPGMTEEMAIEIAVRGLKSAMKRDAGSGEGIHV 188
Query: 187 YIVT 190
+T
Sbjct: 189 VAIT 192
>gi|443896400|dbj|GAC73744.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 [Pseudozyma
antarctica T-34]
Length = 91
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 116 DKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
D+PFI D IG AKDFVV+GTA + L+G E +++PD+ P+ELFETVSQ LL +++
Sbjct: 18 DEPFIAATDVIGCLNFAKDFVVSGTASDKLFGMAEGLWEPDLGPEELFETVSQILLGALE 77
Query: 176 RDCLSGWGGHVYIV 189
RD LSGWG V I+
Sbjct: 78 RDALSGWGAVVRIM 91
>gi|395827082|ref|XP_003786737.1| PREDICTED: proteasome subunit beta type-3 [Otolemur garnettii]
Length = 133
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKL 73
QT+ Q R+ L
Sbjct: 61 QTVGQNKPNRNIL 73
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 158 EPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+P+ LFET+SQA+L++VDRD +SG G V+I+ +I R LK RMD
Sbjct: 87 DPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 133
>gi|340344597|ref|ZP_08667729.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519738|gb|EGP93461.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 197
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 7 GATAVGITFNGGIVLASEKRIAFGNFLVSKSSKKTFSITSKVGAACAGLVADMQILTLQI 66
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPILYTLDPLG 124
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L ++ GT E G + FKP+M +E + +A+ S+ RD SG G +
Sbjct: 125 S-VLPDEYAAVGTGAEMALGVLDPQFKPNMTQEEAIDLAKRAVRSAALRDSASGDGLDIL 183
Query: 188 IVTPTEIKE 196
+VT KE
Sbjct: 184 VVTKDGTKE 192
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ + +V K+ +A+++R + + +++ ++ DR+ + +G D+Q L +
Sbjct: 8 KGTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGGVGDAQQLARI 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ LYQ+R R + ++L+S L + R PY+ Q ++ G+ D P + ++D++
Sbjct: 68 MSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYVQLLVGGV-DATGPSVYSVDAM 126
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G D V G+ YG E +K D+ DE E +AL +++ RD SG G HV
Sbjct: 127 GGATRESDIVATGSGSPMAYGVLEDRYKKDLTEDEAIELAIRALRAAMRRDSASGEGIHV 186
Query: 187 YIVT 190
I+T
Sbjct: 187 VIIT 190
>gi|149054059|gb|EDM05876.1| rCG33987, isoform CRA_c [Rattus norvegicus]
Length = 75
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 56/74 (75%)
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
+ DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G V+I+
Sbjct: 2 VTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIE 61
Query: 191 PTEIKERILKGRMD 204
+I R LK RMD
Sbjct: 62 KDKITTRTLKARMD 75
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
V +V K+ +A+++R + + ++I +I DR+ + +G D+Q L + +
Sbjct: 4 VGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEA 63
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKEL 131
LY++R ER A+L S LL R+ PY Q +I G+ E K I ++D IG
Sbjct: 64 NLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIGGAIE 122
Query: 132 AKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTP 191
KD V G+ + YG E F P++ DE E +A+ S++ RD SG G V +T
Sbjct: 123 EKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITE 182
Query: 192 TE 193
E
Sbjct: 183 DE 184
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 5/199 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M +Y G+ V ++ N +A++RR + + D Q+I ++ D + + ++G D
Sbjct: 1 MDDKQYKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDG 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + L KL++LR M + L+S LL+E R ++ Q ++ G+ D+ P +
Sbjct: 61 QRLARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRI--FYIQVLVGGV-DKSGPKL 117
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
++D G + F G+ YG E +K DM ++ E ++AL S++ RD S
Sbjct: 118 FSLDPAGGRITEVKFSSTGSGSPLAYGVLEDRYKQDMSVEQGVELAAKALESAMKRDSAS 177
Query: 181 GWGGHVYIVTP--TEIKER 197
G G ++TP EI ER
Sbjct: 178 GNGMQFCVITPGKVEIFER 196
>gi|148684146|gb|EDL16093.1| mCG13231, isoform CRA_c [Mus musculus]
Length = 75
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 56/74 (75%)
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
+ DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G V+++
Sbjct: 2 VTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHVIE 61
Query: 191 PTEIKERILKGRMD 204
+I R LK RMD
Sbjct: 62 KDKITTRTLKARMD 75
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 95/188 (50%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ KLY++R R++ P A+L+S +L+ R P+ Q +I G + + ++D +G
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLG 125
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
K F G+ YG EA + DM +E + AL S+++RD SG G +
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLA 185
Query: 188 IVTPTEIK 195
++T +K
Sbjct: 186 VITKDGVK 193
>gi|357616094|gb|EHJ70006.1| hypothetical protein KGM_20821 [Danaus plexippus]
Length = 437
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ YNG A+VAM G++C AIA+D+R G+Q QT++T+F ++ ++ LF+GL GLATD+Q
Sbjct: 357 SVETYNGGAVVAMKGQDCVAIATDKRYGIQAQTVSTNFPKVYQMGPTLFVGLPGLATDTQ 416
Query: 62 TLYQRLVFRH 71
T++QRL FR+
Sbjct: 417 TVFQRLKFRY 426
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 93/174 (53%), Gaps = 1/174 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + IA+D R + +T+ +++ KI + L + ++GL D+Q L + L
Sbjct: 12 GTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLGMTIAGLVGDAQELIRIL 71
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
++++Y++ E + M P + A+L+S +L E + P++ Q ++ G+ D K ++ +D+ G
Sbjct: 72 KIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGVED-GKGYVYNLDAAG 130
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
F G+ + G E +KP + + + ++ALL ++ RD +G
Sbjct: 131 GYTQESRFTATGSGSLTALGYLEDSYKPGLTTKDAIKIAAKALLIAMQRDSATG 184
>gi|397607048|gb|EJK59530.1| hypothetical protein THAOC_20230, partial [Thalassiosira
oceanica]
Length = 61
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C AIASD RLG+ QT+A DF+++ K++DRL +GL+GLATD
Sbjct: 1 MSILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDV 60
Query: 61 Q 61
Q
Sbjct: 61 Q 61
>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITSQVGATCAGLVADMQILTLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 120
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L ++ GT E G + +KP+M DE + +A+ S+ RD SG G +
Sbjct: 121 S-VLPDEYAAVGTGAEMALGVLDPQYKPNMSKDEAIDLAKRAVRSAALRDSASGDGIDIL 179
Query: 188 IVTPTEIKE 196
++T I+E
Sbjct: 180 VITKDGIEE 188
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ +A+DRR + ++I +IHD + + +G D+Q + +
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYE--KRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+LY+LR R + A+++S +L+ K F PY Q ++ G +D+D P + +D
Sbjct: 70 RAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDD-PALYNLDP 128
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G+ + +D+ G+ + YG EA ++ M D+ E +A+ S+++RD +G G
Sbjct: 129 SGSI-IEEDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEGVT 187
Query: 186 VYIVTPTE 193
V +T E
Sbjct: 188 VVTITREE 195
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 96/188 (51%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R +++ P A+L+S +L+ R+ P+ Q +I G + + ++D +G
Sbjct: 66 TAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLDPLG 125
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
K F G+ YG EA + DM +E + +AL S+++RD SG G +
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDTYSGNGISLA 185
Query: 188 IVTPTEIK 195
++T +K
Sbjct: 186 VITKEGVK 193
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V ++ +AS+ R + + ++I +I DR+ + +G D+Q + +
Sbjct: 10 TGTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIARL 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ LYQ+R R + A+L+S +L R+ P++ Q ++ G+ DE P + +D++
Sbjct: 70 MTVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYVQLLVGGV-DEGGPKLYAVDAL 128
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G ++ V G+ +G E + D+ DE +A+ S++ RD SG G HV
Sbjct: 129 GGASREEEMVATGSGSPMAFGVLEDRYSKDLSEDEAVALAVRAIRSAMKRDAGSGEGIHV 188
Query: 187 YIVTPTEIKE 196
++T +E
Sbjct: 189 VVITKEAYRE 198
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ V +V K+ +A+++R + + ++I +I DR+ + +G D+Q L +
Sbjct: 10 YKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFLAR 69
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ KLY++R+E + A+L+S +L R+ PYF Q ++ G+ D+ P I ++D
Sbjct: 70 LISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGV-DKRGPSIYSIDL 128
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G D V G+ + YG E + P++ D+ E +A+ S++ RD SG G
Sbjct: 129 LGGAIEEIDIVATGSGSPTAYGVLEDRYTPEITVDDGVELAVRAIYSAMRRDSASGDGID 188
Query: 186 VYIVT 190
V +T
Sbjct: 189 VVKIT 193
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T++T +++ ++D+L I +G+ D Q L + L
Sbjct: 8 GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ Y+L ++ + A L+S +++ +RF P++ + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGV-DEEGPHLIVMDPLG 126
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + ++ GT + +A ++PDM +E + QA+ ++++RD +SG G +
Sbjct: 127 SL-IEDNYAALGTGAKLAVSLLDASYRPDMTVEEAKKLAVQAVKAAIERDPVSGGGIDLV 185
Query: 188 IV 189
+V
Sbjct: 186 VV 187
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ E +D AG G+ AM +P ++ ++ + V
Sbjct: 152 VGSYE--RDNFKAG-------GSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKD 202
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE+ ++ R D
Sbjct: 203 VFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ E +D AG G+ AM +P ++ ++ + V
Sbjct: 152 VGSYE--RDNFKAG-------GSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKD 202
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE+ ++ R D
Sbjct: 203 VFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ E +D AG G+ AM +P ++ ++ + V
Sbjct: 152 VGSYE--RDNFKAG-------GSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKD 202
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE+ ++ R D
Sbjct: 203 VFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238
>gi|407464585|ref|YP_006775467.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407047773|gb|AFS82525.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 194
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 3/183 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I +++ +GL D Q L ++
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITNKVGATCAGLVADMQILTLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 120
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L ++ GT E G + FKP+M DE + +A+ ++ RD SG G +
Sbjct: 121 S-VLPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAVDLAKRAVRAAALRDSASGDGLDIL 179
Query: 188 IVT 190
++T
Sbjct: 180 VIT 182
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ V +V K+ +A+++R + + ++I KI DR+ + +G D+Q L +
Sbjct: 7 FKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLAR 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY +R+E + + A+LVS LL R+ PY Q +I G+ D+ I ++D
Sbjct: 67 LIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGV-DKTGAKIYSIDP 125
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG D V G+ YG E ++ D+ DE E +A+ S++ RD SG G
Sbjct: 126 IGGAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDSASGDGID 185
Query: 186 VYIVTPTEIKE 196
V +T E E
Sbjct: 186 VVKITEKEYVE 196
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L+
Sbjct: 5 VGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEA 64
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKEL 131
KLY++R R++ P A+L+S +L+ R P+ Q +I G + + ++D +G
Sbjct: 65 KLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNE 124
Query: 132 AKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTP 191
K F G+ YG EA + DM +E + AL S+++RD SG G + ++T
Sbjct: 125 EKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITK 184
Query: 192 TEIK 195
+K
Sbjct: 185 DGVK 188
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 7/201 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R R++ P A+L+S +L+ R P+ Q +I G + + ++D +G
Sbjct: 66 TAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLDPLG 125
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
K F G+ YG EA + +M +E + AL S+++RD SG G +
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDTFSGNGISLA 185
Query: 188 IVTPTEIK-------ERILKG 201
++T +K E+IL G
Sbjct: 186 VITKEGVKIFEDEEIEKILDG 206
>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
rotundata]
Length = 236
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G + IA+D RL V + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSVGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRF 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY +RF PY+ +I GL D+ + + D I
Sbjct: 91 LSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYISNIIGGLDDKGHGCVYSYDPI 150
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E AK + G+AG L Y E + + ++ + +S+ +RD
Sbjct: 151 GHCEAAK-YRAGGSAGALLQPLLDNQIGYKNQEGVEPVPLTQEKAIAVIKDVFISAAERD 209
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G + I+T IK+ + R D
Sbjct: 210 IYTGDSISIKIITKDGIKDESFELRKD 236
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ DR IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALKICIVTKDGIREETIPLRKD 241
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q+L
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQSLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++
Sbjct: 108 LKAETSLYETRRGKDMTMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDAL 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +++ V G+ + G E + D+ DE E ++A+ S+V+RD SG G +V
Sbjct: 165 GGT-TEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGINV 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDME-----------------PDELFETVSQ 168
+G+ + +D AG G+ AM +P ++ ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMDGVQQVPLTQEKAIQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G H+ I+T I+E+ ++ R D
Sbjct: 202 VFISAAERDVYTGDALHICIITKEGIQEQTVQLRKD 237
>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
Length = 240
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + + + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLALAGEDFALVASDTRLSEDYSIHSRNTPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ ++ + V
Sbjct: 154 VGSYQ--RDAYKAG-------GSASAMLQPLLDNQIGYKNMQNVEHLPLTLEKALQLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 205 VFISAAERDVYTGDALKISIVTKDGIKEESIPLRKD 240
>gi|115444637|ref|NP_001046098.1| Os02g0182500 [Oryza sativa Japonica Group]
gi|113535629|dbj|BAF08012.1| Os02g0182500, partial [Oryza sativa Japonica Group]
Length = 47
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 45/47 (95%)
Query: 158 EPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
EP+ELFET+SQAL +SVDRDCLSGWGG+V +VTPTE++ER++KGRMD
Sbjct: 1 EPEELFETISQALQASVDRDCLSGWGGYVLLVTPTEVQERVIKGRMD 47
>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ + D+ +I +I ++ + SG D ++L +
Sbjct: 20 NGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHQITEKCVLASSGFQADVRSLQKN 79
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH++YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 80 LDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVYTYDAV 139
Query: 127 GAKEL-------AKDFVVAGTAGESLYGACEAMFKP-----DMEPDELFETVSQALLSSV 174
G+ E + ++ L A + P + +E + + S+
Sbjct: 140 GSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTENEAVDLIKDTFASAA 199
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G G + I+ I+ + + D
Sbjct: 200 ERDIYTGDGVEIVIINKDGIRRETMPLKRD 229
>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
Length = 241
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ DR IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHIPLTLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ + + GK+ IA+++R ++ +++ KI + + +G+ D Q + +
Sbjct: 7 YPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY+L + + +T A ++S L+ R+ PYF + ++ G+ D P + +D
Sbjct: 67 EVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGI-DSQGPHVIVLDP 125
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+G+ + D+ V GT E G E +++ DM E+ + ++A+ +S+ RD SG G
Sbjct: 126 LGSM-IEDDYAVVGTGAEVAVGVIENLYRKDMSATEIRDLATKAIKASIARDAGSGNG 182
>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
Length = 241
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E L R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETLPLRKD 241
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ V ++ K+ +A+++R + + ++I ++ DR+ + +G D+Q L +
Sbjct: 9 FKGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVADRVAMTTAGSVGDAQFLAR 68
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY+ R+E + A+++S LL R+ PYF Q +I G+ D+ P + ++D
Sbjct: 69 LVKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGV-DKRGPSMFSIDP 127
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG D V G+ + YG E + P++ E E +A+ S++ RD SG G
Sbjct: 128 IGGAIEETDIVATGSGSPTAYGVLEDRYYPEITTQEGVELAIRAITSAMKRDSASGDGID 187
Query: 186 VYIVTPTE 193
V +T E
Sbjct: 188 VVKITKDE 195
>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 198
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 124
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L ++ GT E G + FKP+M DE + +A+ ++ RD SG G V
Sbjct: 125 S-VLPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGVDVL 183
Query: 188 IVT 190
++T
Sbjct: 184 VIT 186
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + + + K+ D+ IG +G D TL +
Sbjct: 33 FNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCTGFHADCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 IIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP----------DELFETVSQAL----- 170
+G+ + +D AG G+ AM +P ++ ++L T+ +AL
Sbjct: 153 VGSYQ--RDAYKAG-------GSASAMLQPLLDNQIGYKNMQNVEQLPLTLEKALKLIKD 203
Query: 171 --LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G H+ IVT ++E + R D
Sbjct: 204 VFISAAERDVYTGDALHISIVTKDGVREESISLRKD 239
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 97/184 (52%), Gaps = 6/184 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+D R + + D Q++ +IH + ++G + +Q+L + L
Sbjct: 47 GTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKVEQIHPTAALTIAGSVSAAQSLIRSL 106
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
LY+ R +DM + A+L++ L R G +F QP++ G+ DE+ P + +MD++
Sbjct: 107 KAETSLYETRRGQDMSMQALATLLANFL---RSGAFFVVQPILGGV-DEEGPHVYSMDAL 162
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +++ V G+ + G E ++ D+ +E ++A+ S+V+RD SG G +V
Sbjct: 163 GGMS-EENYTVTGSGSQYALGVLEQHYEEDLSIEEAKTVAAKAIQSAVERDLASGNGINV 221
Query: 187 YIVT 190
+VT
Sbjct: 222 AVVT 225
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 10/208 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ +R IG SG D TL +
Sbjct: 31 FNGGTVLAIAGEDFSLVASDTRLSEGYAIHCRDSPKCYKLTERTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FKPDMEPDELFETVSQAL-------LSSVDR 176
+G+ + F AG+A L + FK + L T+ +AL +S+ +R
Sbjct: 151 VGSYQ-RDSFKAAGSASAMLQPLLDNQIGFKNMQNVEHLPLTLEKALQLVKDVFISAAER 209
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + IVT IKE ++ R D
Sbjct: 210 DVYTGDALKICIVTKDGIKEETVQLRKD 237
>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
Length = 241
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 213
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 7 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 67 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 127 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 177
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 178 VFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 213
>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
troglodytes]
gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
Length = 241
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
Length = 241
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHIPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALKVCIVTKEGIREETIPLRKD 241
>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
occidentalis]
Length = 233
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
N LV + G++ I SD RL + + D ++ K+ DR +G SG D +L +
Sbjct: 28 NAGTLVGIAGEDFAVIGSDLRLSLGFSIFSRDQSKLFKLTDRAVLGSSGCWADCVSLNKF 87
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y + M + A S +LY +RF PYF ++AG+ ++ K I + D +
Sbjct: 88 LEIRLKTYGFEHNQPMSTKAIAQCCSTMLYSRRFFPYFAWNILAGIDEDGKGAIYSYDPV 147
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMF------KPDMEP---DELFETVSQALLSSVDRD 177
G E + AG +G + +++ PD P + + +S+ +RD
Sbjct: 148 GNFERVP-YQAAGNSGPQVLPFLDSIVGKKNQSNPDKAPITKERAINLIKDIFISAAERD 206
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
G G H+ ++T ++E L R D
Sbjct: 207 ITVGDGTHIIVITKDGLEEIRLDLRKD 233
>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
Length = 241
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRVCIVTKEGIREETVPLRKD 241
>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
Length = 242
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 249
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + +AS RL ++ D + K+ D+L I G D++TL++
Sbjct: 40 NGGTCVAVAGNDYCIVASSTRLSTGFSILSRDVSMVLKLSDKLMILSPGFQADAKTLHKV 99
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R+ YQ R M A L+ LY KRF PY+ + AGL +E K + + D+I
Sbjct: 100 LQQRYIRYQFDHGRPMSVAACAQLLGNTLYYKRFFPYYTFNICAGLDEEGKGAVYSYDAI 159
Query: 127 GAKELAKDFVVAGTAGE--------SLYGACEAMFKPD-----MEPDELFETVSQALLSS 173
G+ E + + V G+ + L A + P+ + D+ + V A +S+
Sbjct: 160 GSHERS-GYAVQGSGKDLIQPVLDNQLKAASPLVLPPENWMSSLPLDQAVDLVRDAFVSA 218
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G +YI+T K +L+ + D
Sbjct: 219 GERDIYTGDAVEIYIMTMEGTKREVLELKKD 249
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + + + K+ D IG +G D TL +
Sbjct: 33 FNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVIGCTGFHADCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 IIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP----------DELFETVSQAL----- 170
+G+ + +D AG G+ AM +P ++ ++L T+ +AL
Sbjct: 153 VGSYQ--RDAYKAG-------GSASAMLQPLLDNQIGYKNMQNVEQLPLTLEKALKLIKD 203
Query: 171 --LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G H+ IVT I+E + R D
Sbjct: 204 VFISAAERDVYTGDALHISIVTKDGIREESVSLRKD 239
>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
Length = 241
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241
>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
Length = 241
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
Length = 241
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETIPLRKD 241
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 38 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 97
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 98 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 157
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFET-----------------VSQ 168
+G+ + +D AG G+ AM +P ++ F+ V
Sbjct: 158 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLERAMQLVKD 208
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 209 VFISAAERDVYTGDSLKICIVTKDGIKEETIPLRKD 244
>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
Length = 213
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 7 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 67 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 127 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKD 177
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 178 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 213
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q L
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQHLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDAL 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +++ V G+ + G E + D+ DE E ++A+ S+V+RD SG G +V
Sbjct: 165 GGT-TEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGINV 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|407462234|ref|YP_006773551.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045856|gb|AFS80609.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 194
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 120
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L ++ GT E G + FKP+M DE + +A+ ++ RD SG G +
Sbjct: 121 S-VLPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGLDIL 179
Query: 188 IVT 190
++T
Sbjct: 180 VIT 182
>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
Length = 241
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
Length = 241
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
Length = 240
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 205 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
Length = 241
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241
>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
boliviensis]
Length = 241
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMASSGFQADVRALQKH 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAV 133
Query: 127 GAKE------------LAKDFVVAGTAGES--LYGACEAMFKPDMEPDELFETVSQALLS 172
G+ E L F+ S L A +A+ P EP E + V S
Sbjct: 134 GSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPALDAV-TPLSEP-EAVDLVKTVFAS 191
Query: 173 SVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ +RD +G + I+ + I+ + R D
Sbjct: 192 ATERDIYTGDKLEIVILNASGIRREYMDLRKD 223
>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
Length = 240
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 205 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
Length = 241
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
Length = 240
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 205 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
Length = 241
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 38 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 97
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 98 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 157
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFET-----------------VSQ 168
+G+ + +D AG G+ AM +P ++ F+ V
Sbjct: 158 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHIPLSLERAMQLVKD 208
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 209 VFISAAERDVYTGDSLKICIVTKDGIKEETVPLRKD 244
>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
norvegicus]
gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
[Rattus norvegicus]
Length = 240
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 205 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
Length = 225
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 19 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 78
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 79 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 138
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 139 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKD 189
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 190 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 225
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + ++ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTILAIAGEDFSIVASDTRLSEGFSIHSRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 205 VFISAAERDVYTGDTLKICIVTKDGIREETVPLRRD 240
>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ + D+ +I I ++ + SG D ++L +
Sbjct: 28 NGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHHITEKCVLASSGFQADVRSLQKN 87
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH++YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 88 LDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 147
Query: 127 GAKEL-------AKDFVVAGTAGESLYGACEAMFKPDMEPDELFET-----VSQALLSSV 174
G+ E + ++ L A + P L E+ + S+
Sbjct: 148 GSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTESEAVDLIKDTFASAA 207
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G G + I+ I+ + + D
Sbjct: 208 ERDIYTGDGVEIVIINKEGIRRETMALKRD 237
>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
Length = 232
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL + +++ K+ DR +G +G D+ TL +
Sbjct: 27 NGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSDRTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL E K + + D I
Sbjct: 87 LQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYISNVLAGLDAEGKGCVYSYDPI 146
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + ++ G+AG L + + + + ++ + +S+ +RD
Sbjct: 147 GHCERS-NYRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPLSREKALALLKDVFISAAERD 205
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G ++ I+T I+E + R D
Sbjct: 206 IYTGDSIYILIITANGIQEEKFELRKD 232
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%), Gaps = 2/180 (1%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
+ +A+++R+ L ++ +++ +I D++ + +GL D QTL + + +LY+L
Sbjct: 15 DGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELD 74
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVV 137
K T A L+S +LYE+R PY+ + V+ GL DE+ + ++D IGA + D+V
Sbjct: 75 SNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGL-DEEGSHLYSLDPIGAI-IEDDYVA 132
Query: 138 AGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKER 197
G+ + E+ +K DM DE +++ +++ RD SG G V ++ + E+
Sbjct: 133 LGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVDVLVIGKSGTLEK 192
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+D R + + D Q++ +IH R + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTDEGVVLATDMRASLGHMVSSKDVQKVEEIHPRGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE I ++D G
Sbjct: 109 RAEVRLYESRRGEDMSMQALSTLVGNFLRSGGF--YIVQPILGGVDDE-GAHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E F D+ DE E ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFSEDLSIDEAREVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
Length = 243
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH R + ++G + +Q L L
Sbjct: 49 GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDALG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+++ V G+ + G E + D+ DE ++A+ S+V+RD SG G +V
Sbjct: 166 GT-TEEEYTVTGSGSQYALGVLEQEYDDDVTIDEAKNIAAKAIQSAVERDLASGNGINVA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
Length = 241
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT ++E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGVREETVPLRKD 241
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q L
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDAL 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +++ V G+ + G E + ++ DE E ++A+ S+V+RD SG G +V
Sbjct: 165 GGT-TEEEYTVTGSGSQYALGVLEQEYHDEVTVDEATEIAAKAIQSAVERDLASGNGINV 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
carolinensis]
Length = 239
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 33 FNGGTILAIAGEDFSIVASDTRLSEDYAVHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 IIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ ++ + V
Sbjct: 153 VGSYQ--RDTFKAG-------GSASAMLQPLLDNQVGLKNMQNVQQVSLTLEKALQLVKD 203
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + I+T IKE + R D
Sbjct: 204 VFISAAERDVYTGDALKICIITKDGIKEETVPLRRD 239
>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
Length = 240
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 205 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
Length = 241
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFET-----------------VSQ 168
+G+ + +D AG G+ AM +P ++ F+ V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMGLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 3/170 (1%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A+DRR+ ++ +++ I++R+ + +GL D Q L L + +Y+L E+
Sbjct: 17 LAADRRVSYNGFILSKSARKVFLINERVGVSTAGLPGDFQELVDVLKYNITMYELENEKA 76
Query: 82 MKPETFASLVSALLYEKRF-GPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGT 140
P A L+S LLY+ RF G Y+ + V+ G+ D P I +D G + ++F G+
Sbjct: 77 ATPTNVAKLLSILLYQGRFSGIYYAELVVGGI-DNSGPKIFVLDPAGGL-MEENFSAVGS 134
Query: 141 AGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
+ G E FK M E E +A+ ++ RD LSG G + I+T
Sbjct: 135 GAQIATGILERFFKEGMSEKEAVELAERAMREAISRDALSGDGIDLLIIT 184
>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 32 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 92 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 151
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 152 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKD 202
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + I+T I+E I+ R D
Sbjct: 203 VFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + I+T I+E I+ R D
Sbjct: 202 VFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237
>gi|345318445|ref|XP_001517317.2| PREDICTED: proteasome subunit beta type-3-like [Ornithorhynchus
anatinus]
Length = 106
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQT 59
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 126 IGAKELAKDFVVAGTAGESLY-GACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
I A+ + DF G+ LY G EP+ LFET+SQA+L++VDRD +SG G
Sbjct: 27 IQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTEPEHLFETISQAMLNAVDRDAVSGMGV 86
Query: 185 HVYIVTPTEIKERILKGRMD 204
V+++ +I R LK RMD
Sbjct: 87 VVHVIEKNKITTRTLKARMD 106
>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ I +D RL ++ ++ D+ + +G D+ L
Sbjct: 24 ESNGGSVVAIAGEDFAVIGADTRLSSGYSIHTRTQNKLFRLSDKTVLASTGCWCDTLALT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + +++M A ++S L+Y +RF PY+ V+AGL + K + + D
Sbjct: 84 SLVKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDQDGKGVVYSYD 143
Query: 125 SIGAKELAKDFVVAGTAGESLYGACE------AMFKPDMEPDELFETVS---QALLSSVD 175
IG E+ + G+AG L + M D EP ++ + +S +S+ +
Sbjct: 144 PIGHCEMTT-YRAGGSAGPLLQPVLDNQIGQKNMLNADPEPVKMEKAISIIKDTFISATE 202
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + I+T IKE L R D
Sbjct: 203 RDIYTGDSVIINIITKDGIKEETLHLRKD 231
>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
Length = 240
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRNSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 205 VFISAAERDVYTGDALRICIVTKEGIREETIPLRKD 240
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DMEP--------DELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMENVEHVPLTQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V IV+ IKE I+ R D
Sbjct: 202 VFISAAERDVYTGDALKVCIVSKEGIKEEIVPLRKD 237
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
+ G+ V +V K+ AS++R LG + A D +I KI + L ++G D+Q
Sbjct: 5 NNFKGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVD--KIFKIDEHLATTVAGSVGDAQ 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + L +LY+LR + AS+ S +L+ R P+ Q +I G+ DE P I
Sbjct: 63 KLVEYLKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGI-DETGPKIY 121
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
++D G K + +V G+ YG E +K DM ++ +A+ SS RD SG
Sbjct: 122 SVDPAGGK-IEDKYVSTGSGSPIAYGVLEDRYKKDMSVEDAINIALRAIKSSTKRDTFSG 180
Query: 182 WGGHVYIVTPTE 193
G + +VT E
Sbjct: 181 DGISLAVVTEKE 192
>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
Length = 223
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + ++ +I K+ D+ + SG D + L ++
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKICKLADKCVMASSGFQADVRALQKQ 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVLTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
Length = 241
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + ++ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 206 VFISAAERDVYTGDALKICIVTKEGIREETVPLRKD 241
>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 223
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D RL + D+ +I K+ D+ + SG D + L +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVLASSGFQADVKALQKA 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL E K + T D++
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
vitripennis]
gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
vitripennis]
Length = 236
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL Q++ + + +G SG D TL +
Sbjct: 31 NGGSVVALAGDDFSLIAADSRLSAGFSIYTRKQQKLFTLSETSVLGCSGCWCDILTLTRV 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R ++Y+ + M A ++S +LY KRF PY+ ++AGL +E K I D +
Sbjct: 91 MAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYINNILAGLDEEGKGVIYRYDPV 150
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E +V G+AG L Y E + K + ++ V +S+ +RD
Sbjct: 151 GHCE-KNTYVAGGSAGALLQPLLDNQVGYLNQENVEKIPLTKEKALSIVKDVFISAAERD 209
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G G ++ I+T I + R D
Sbjct: 210 IYTGDGINIKIITKDGIVDETFDLRRD 236
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V ++ K+ +A++ R + + ++I KI R+ + +G D+Q L +
Sbjct: 10 KGTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLVRI 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ LY++R R M ++L+S L + R+ PY+ Q ++ G DE P + ++D++
Sbjct: 70 IQVECSLYEMRRGRTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGF-DEGGPSVYSVDAM 128
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G ++ V G+ YG E ++PDM +E + +A+ S++ RD SG V
Sbjct: 129 GGATREEEIVATGSGSPFAYGVLEDQYRPDMTEEEAKDLAIRAVRSAMRRDAGSGENIMV 188
Query: 187 YIVTPTEIKERILKG 201
++ + +E I+ G
Sbjct: 189 VVIMKDKYEESIVSG 203
>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
Length = 235
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL + D ++ K+ +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKLSPHTVLGSTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S ++Y +RF PY+ ++AGL + K + + D
Sbjct: 86 GLMKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK-----------PDMEPDELFETVSQALLSS 173
IG E A + GTAG L + P + D S +S+
Sbjct: 146 PIGHCERAT-YRAGGTAGSLLQPVLDNQIGYKNQNLAADQLPPLTKDRAVSVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+++ L+ R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEQKTLQLRKD 235
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ + IG SG D TL +
Sbjct: 31 FNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYKLTEHTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ ++ + V
Sbjct: 151 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + +VT IKE ++ R D
Sbjct: 202 VFISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237
>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL + K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME D+ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V I+T I E+ + R D
Sbjct: 202 VFISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237
>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL + K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME D+ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V I+T I E+ + R D
Sbjct: 202 VFISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA V NC IA+D RL + + ++ K+ IG SG+ D L+
Sbjct: 13 NGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTSGMQADMHALHSA 72
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +LY+ + R+ A L+S +LY +RF PY+ ++ G+ + + C D+I
Sbjct: 73 LERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDENGRGITCGFDAI 132
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEP--------DELFETVSQALLSSVDRDC 178
G ++ GT+ + + + +EL + A+ S+V+RD
Sbjct: 133 GNYGF-DAYMAKGTSSSLIMSILDNHLTSRNQQKHNEIQSLEELINVIKGAMTSAVERDI 191
Query: 179 LSGWGGHVYIV 189
+G V ++
Sbjct: 192 FTGDAAEVIVI 202
>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
Length = 230
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L +
Sbjct: 21 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 80
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 81 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 140
Query: 127 GAKE 130
G+ E
Sbjct: 141 GSYE 144
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE R D
Sbjct: 202 VFISAAERDVYTGDALRICIVTKDGIKEETFPLRKD 237
>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
rubripes]
Length = 237
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DMEP--------DELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMENVQQVPLSQEKAIQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + I+T IKE+ + R D
Sbjct: 202 VFISAAERDVYTGDALRICIITKEGIKEQTIPLRKD 237
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTE 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 202 VFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
niloticus]
Length = 237
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME D+ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVEHVPLTKDKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + ++T I E + R D
Sbjct: 202 VFISAAERDVYTGDALRICVITKEGINEETIPLRKD 237
>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
Length = 236
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G + IA+D RL + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRL 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++ GL ++ K + + D I
Sbjct: 91 LSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSYDPI 150
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E+ K + G+AG L Y E + + ++ + +S+ +RD
Sbjct: 151 GHCEVTK-YRAGGSAGALLQPLLDNQIGYKNQEGVEPVPLTQEKAVAIIKDVFISAAERD 209
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G + I+T I++ + R D
Sbjct: 210 IYTGDSISIKIITKDGIQDSTFELRKD 236
>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L +
Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome beta subunit F-1; AltName: Full=Proteasome
component 5; AltName: Full=Proteasome subunit beta
type-6; AltName: Full=TAS-F22/FAFP98; AltName:
Full=TAS-G39.20
gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L +
Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 202 VFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 202 VFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q L
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GSHIYSIDAL 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +++ V G+ + G E + D+ DE ++A+ S+V+RD SG G +V
Sbjct: 165 GGT-TEEEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLASGNGINV 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V +A++RR + + +++ +I DR+ + +G D+Q L + +
Sbjct: 14 GTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIADRIGMTTAGGVGDAQQLARWV 73
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY +R R+M ASL+S +L R PY+ Q ++ G+ D P I ++D++G
Sbjct: 74 QVECSLYNIRRGREMSVGASASLLSNILNNNRMMPYYVQLLVGGV-DSGGPSIYSVDALG 132
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
D V G+ YG E F+ M + + +AL S++ RD SG V
Sbjct: 133 GASPEDDIVATGSGSPFAYGVLEDRFEKGMPEKDCVDLAIRALRSAMRRDSASGEDISVV 192
Query: 188 IVTPTEIKERILKG 201
++T + +E + KG
Sbjct: 193 VITKDKYEEFMEKG 206
>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
Length = 237
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKALQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 202 VFISAAERDVYTGDALRICIVTKDGIKEENVPLRKD 237
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E F+ + DE + ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E F+ + DE + ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ + IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHLPLNQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 202 VFISAAERDVYTGDALRICIVTKEGIKEETVPLRKD 237
>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
Length = 236
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G + IA+D RL + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRL 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++ GL ++ K + + D I
Sbjct: 91 LSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSYDPI 150
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E+ K + G+AG L Y E + + ++ + +S+ +RD
Sbjct: 151 GHCEVTK-YRAGGSAGALLQPLLDNQIGYKNQEGVEPIPLTQEKAVAIIKDVFISAAERD 209
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G + I+T I++ + R D
Sbjct: 210 IYTGDSISIKIITKDGIQDSTFELRKD 236
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I+D+L I +G+ D QTL + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
Y+L + A L+S +++ +R P++ + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGV-DEEGPHLIVMDPLG 126
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + ++ GT + +A ++PD+ E + QA+ ++++RD +SG G +
Sbjct: 127 SL-IEDNYAALGTGAKLAVSLLDATYRPDISLQEAKKLAVQAIKAAIERDPVSGGGIDLA 185
Query: 188 IVTPTEIKERILKGRM 203
+V +E +K +M
Sbjct: 186 VVDNNGAREEEVKIQM 201
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q L + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R +++ P + A+L+S +L+ R P+ Q +I G P + ++D IG
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQLIIGGYDLLYGPRLFSLDPIG 129
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
F G+ + YG E + DM + +AL+S+++RD SG G
Sbjct: 130 GLNEESSFTATGSGSPTAYGILELEYSKDMTLKDGLNLAIKALISAMERDAFSGNG 185
>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
Length = 237
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL ++ K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEQGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME D+ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVEHVPLTKDKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E+ + R D
Sbjct: 202 VFVSAAERDVYTGDALRICIVTKEGIEEQNIPLRKD 237
>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
Length = 237
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DMEP--------DELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMENVEEVPLTLEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + I+T I+E I+ R D
Sbjct: 202 VFISAAERDVYTGDALEICIITKEGIREEIVPLRKD 237
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + ++ ++ IG SG D TL +
Sbjct: 31 FNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ ++ + V
Sbjct: 151 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + +VT IKE ++ R D
Sbjct: 202 VFISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237
>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
Length = 241
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 205
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G V IVT I+ + R D
Sbjct: 206 VFISAAERDVYTGDALKVCIVTKEGIRGETVPLRKD 241
>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
Length = 243
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + + +A+D R + + D Q++ +IH R + ++G + +Q L
Sbjct: 48 TGTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDS 125
L LY+ R +DM E ++L LL R G +F QP++ G+ DE I ++D+
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLL---RSGAFFVVQPILGGVDDE-GAHIYSIDA 163
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G +++ V G+ + G E + D+ DE ++A+ S+V+RD SG G +
Sbjct: 164 LGGT-TEEEYTVTGSGSQYALGVLEQEYDDDVTIDEAKTIAAKAIQSAVERDLASGNGIN 222
Query: 186 VYIVT 190
V +VT
Sbjct: 223 VAVVT 227
>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
Length = 239
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + + + K+ D IG SG D TL +
Sbjct: 33 FNGGTILAIAGEDFVVVASDTRLSEDYAIHSRNSPKCYKLTDTTVIGCSGFHGDCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 ILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ ++ + V
Sbjct: 153 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGLKNMQGVKQLPLSLEKALQLVKD 203
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + ++T IKE R D
Sbjct: 204 VFISAAERDVYTGDALKICVITKDGIKEESFPLRRD 239
>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
Length = 235
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + D ++ K+ D+ +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFVVIAADTRLSSGYNIHSRDQSKLFKLSDQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R + Y+ R M + A ++S +Y +RF PY+ ++AG+ + K + + D
Sbjct: 86 GLLKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYVSNILAGIDKDGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK-----------PDMEPDELFETVSQALLSS 173
IG E A + GTAG L + P + + S +S+
Sbjct: 146 PIGHCERAF-YRAGGTAGTLLQPVLDNQIGHKNINLSSSELPKLTIERAVAIASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+E+ L+ R+D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEEKKLQLRLD 235
>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
gi|255627685|gb|ACU14187.1| unknown [Glycine max]
Length = 223
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +IS++ ++ + SG D + L +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISRLAEKCVMASSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
Length = 232
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL + +++ K+ D+ +G +G D+ TL +
Sbjct: 27 NGGSIVAIAGDDFAVIGADTRLSTGFSIYTREQKKLFKLSDKTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL + K + + D I
Sbjct: 87 LSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDADGKGCVYSYDPI 146
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + ++ G+AG L + + + + ++ + +S+ +RD
Sbjct: 147 GHCERS-NYRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPIPKEKALALLKDVFISAAERD 205
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G ++ I+T + I+E + R D
Sbjct: 206 IYTGDCIYILIITASGIQEEKFELRKD 232
>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
Length = 207
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +IS++ ++ + SG D + L +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS E V + K+ +A+D+R+ ++ + +++ I++R I +SGL D
Sbjct: 1 MSAYEIEQGTAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIAMSGLYADV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+ + L K Y+L EER M + L+S +LY + P+ + ++ G+ + +P I
Sbjct: 61 GAILRYLTAESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRDGQPKI 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
T+DS+G+ K ++ G+ + G E + + D+ + AL S++RD +
Sbjct: 121 YTLDSLGSVSEDK-YMAVGSGATTALGFLEDQYNDALSLDQAEQVAVGALRISMERDAST 179
Query: 181 GWGGHVY-IVTPTEIKERILKGRM 203
G G V I T +KE+ L+ R+
Sbjct: 180 GDGIDVISISTSGAVKEKSLRLRV 203
>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
Length = 229
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 10/208 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG +++A+ G + +ASD RL + + + K+ D+ + +G D T +
Sbjct: 23 FNGGSIMAIAGDDFAVVASDTRLSEGFSIHSRNAPKTYKLTDKTVLASAGFHGDVLTEIK 82
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R K+Y+ + M + A++++ +LY KRF PY+ +I GL +E K + + D
Sbjct: 83 VLEARLKMYEHEHGKKMSSQAIAAMLATILYHKRFFPYYVYNIIGGLDEEGKGCVYSYDP 142
Query: 126 IGAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDR 176
+G+ E + + G+AG L + + + K + D+ + + +S+ +R
Sbjct: 143 VGSYE-REVYRAGGSAGPLLQPLLDNQIGFKNQQGVEKVSLSKDKAIKLIKDIFISAAER 201
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G H+ +VT + E R D
Sbjct: 202 DIYTGDSLHLKVVTKEGVSEETFPLRRD 229
>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
gi|74579825|sp|Q74MP5.1|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
Length = 196
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 9 SALVAMVGKNCFAIASDRRLGVQLQTIATD--FQRISKIHDRLFIGLSGLATDSQTLYQR 66
+ ++ + ++ +ASD++ + I D Q+I I D + + SG D Q + +
Sbjct: 2 TTIIGIKARDGVVLASDKQ--ASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKI 59
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPV---IAGLSDEDKPFICTM 123
L KL +L R M A+L+S LLY+ RF + P+ IAG + + I ++
Sbjct: 60 LKTELKLRELYSRRTMNVIEAANLLSHLLYQNRF---YLNPLGLLIAGPINSKEFGIYSL 116
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D IGA KD+ G+ G G EA + PD+ + + +AL SS+ RD SG+G
Sbjct: 117 DGIGAISEIKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYG 176
Query: 184 GHVYIVTPTEIKERILKGR 202
+Y +T +++ L+ +
Sbjct: 177 IEIYTITKKGVEKLFLEAQ 195
>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
Length = 243
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDS 125
L LY+ R +DM E ++L LL R G +F QP++ G+ DE I ++D+
Sbjct: 108 LRAETSLYEARRSKDMSMEALSTLTGNLL---RSGAFFVVQPILGGVDDE-GAHIYSIDA 163
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G +++ V G+ + G E + ++ DE ++A+ S+V+RD SG G +
Sbjct: 164 LGGT-TEEEYTVTGSGSQYALGVLEQEYDDEVSIDEAKTIAAKAIQSAVERDLASGNGIN 222
Query: 186 VYIVT 190
V +VT
Sbjct: 223 VAVVT 227
>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
Length = 221
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQA 169
D++G+ E + GT + + K P + P E + V
Sbjct: 128 YDAVGSYERTG-YSAQGTGSTLMMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDV 186
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + ++ K ++ R D
Sbjct: 187 FASATERDIYTGDKLEIVVINKAGTKREYIELRKD 221
>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
Length = 223
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +IS++ ++ + SG D + L +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E FK + +E + ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFKDGLSIEEAKQVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 6/184 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
+LY+ R DM + ++LV L R G +F QP++ G+ DED I ++D
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFL---RSGAFFVVQPILGGV-DEDGGHIYSIDPA 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G+ L +++ V G+ + G E + D+ DE + + A+ ++V+RD SG G ++
Sbjct: 165 GSI-LEEEYTVTGSGSQYALGVLEREYSDDLSVDEAKQVATNAIRAAVERDLASGNGINI 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
Length = 235
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL + D ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKMSPKTVLGSTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S ++Y +RF PY+ ++AGL + K + + D
Sbjct: 86 GLVKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK-----------PDMEPDELFETVSQALLSS 173
IG E A + GTAG L + P + + S +S+
Sbjct: 146 PIGHCERAT-YRAGGTAGALLQPVLDNQIGYKNQNLPADQLPPLTKERAVAVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T ++ER L+ R D
Sbjct: 205 AERDIYTGDSVLINIITKDGVEERKLQLRKD 235
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 89/176 (50%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ ++ +A+D+R + + +++ KI D + + ++G D+Q+L + L
Sbjct: 14 GTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLL 73
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+Y++R +M P + +L S +L+ R P Q +I G + P + ++D +G
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYDLINGPKLFSLDPVG 133
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
F G+ + YG EA +K ++ ++ +AL+S++ RD SG G
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEYKSEINIEKGLLIAVKALISAMQRDAYSGNG 189
>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
Length = 221
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKECVFT 127
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQA 169
D++G+ E + GT + + K P + P E + V
Sbjct: 128 YDAVGSYERTG-YSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDV 186
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + ++ K + R D
Sbjct: 187 FASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 221
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 137 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 196
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 197 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 256
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ + +D AG G+ AM +P ++ D V
Sbjct: 257 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 307
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT +E + R D
Sbjct: 308 VFISAAERDVYTGDALKICIVTRDGTREETIPLRKD 343
>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
Length = 205
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G ++A+ G++ +ASD RL + + + K+ D+ IG SG D TL + +
Sbjct: 1 GGTVLALAGEDFAIVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCSGFHADCLTLTKII 60
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G
Sbjct: 61 EARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 120
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQAL 170
+ + +D AG G+ AM +P ++ ++ + V
Sbjct: 121 SYQ--RDAYKAG-------GSASAMLQPLLDNQIGYKNMPNAEQVPLTLEKAIKLVKDVF 171
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E L R D
Sbjct: 172 ISATERDVYTGDSLKISIVTKEGIREESLSLRKD 205
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDAL 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +++ V G+ + G E + + DE ++A+ S+V+RD SG G +V
Sbjct: 165 GGT-TEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGINV 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDAL 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G +++ V G+ + G E + + DE ++A+ S+V+RD SG G +V
Sbjct: 165 GGT-TEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGINV 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G + IA D RL ++ + +++ + D++ SG+ D Q L +
Sbjct: 20 NGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLIKH 79
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ Y L+ +R+M E F L+SA++Y +R P++ ++AG+ E K + + D I
Sbjct: 80 MKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAVYSYDVI 139
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP----DMEPDELFETVSQALLSSVDRDCLSGW 182
G+ L + AGT + + P ++ + FE + A S +RD +G
Sbjct: 140 GST-LRTRYGSAGTGNAMICPILDEAILPKSDAEITREFAFELIQSAFKSCAERDIYTGD 198
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
++ I+ER + R D
Sbjct: 199 SVVAMCISADGIQERTFELRKD 220
>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I ++ D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
D++G+ E G S G A+ P + D ++ S LL + D
Sbjct: 128 YDAVGSYE---------RTGYSAQGTGSALIMPVL--DNQLKSPSPLLLPARD 169
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 6/184 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
+LY+ R DM + ++LV L R G +F QP++ G+ DED I ++D
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFL---RSGAFFVVQPILGGV-DEDGGHIYSIDPA 164
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G+ L +++ V G+ + G E + D+ DE + + A+ ++V+RD SG G ++
Sbjct: 165 GSI-LEEEYTVTGSGSQYALGVLEREYSDDLTVDEAKQVATNAIRAAVERDLASGNGINI 223
Query: 187 YIVT 190
+VT
Sbjct: 224 AVVT 227
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L
Sbjct: 48 TGTTTVGIRTEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDS 125
L LY+ R +DM E ++L LL R G +F QP++ G+ D+D I ++D+
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLL---RTGAFFIVQPILGGV-DDDGAHIYSIDA 163
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G +++ V G+ + G E + D+ +E ++A+ S+V+RD SG G +
Sbjct: 164 LGGT-TEEEYTVTGSGSQYALGVLEQEYHDDVTIEEAETIAAKAIQSAVERDLASGNGIN 222
Query: 186 VYIVT 190
V +VT
Sbjct: 223 VAVVT 227
>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
Length = 237
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCPTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL ++ + + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEQGRGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DMEP--------DELFETVSQ 168
+G+ + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMENVQHLPLSQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + I+T IKE + R D
Sbjct: 202 VFISAAERDVYTGDALRICIITKEGIKEETVPLRKD 237
>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
Length = 225
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 19 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 78
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 79 IIDARLKMYKHSNNKTMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 138
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G+ + +D AG G+ AM +P +ME D+ + V
Sbjct: 139 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKD 189
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + I+ I E+ + R D
Sbjct: 190 VFISAAERDVYTGDALRICIINKEGISEQTIPLRKD 225
>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQA 169
D++G+ E + GT + + K P + P E + V
Sbjct: 128 YDAVGSYERTG-YSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDV 186
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + ++ K + R D
Sbjct: 187 FASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 221
>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
Length = 218
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA KN IA+D RL + + ++ K+ D +G SG+ D L+
Sbjct: 14 NGGTVVAATWKNYAVIAADTRLSIGYAIHTRNVSKMIKLTDTCILGTSGMQADMLALHSA 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + +LY+ + A L+S +LY +RF PY+ ++ G+ + +C+ D+I
Sbjct: 74 MERQVELYRFTHHKTPSFGAIAQLLSTILYSRRFFPYYTFNILCGIDENGNGVVCSYDAI 133
Query: 127 GAKELAKDFVVAGTAGE---SLY----GACEAMFKPDMEP-DELFETVSQALLSSVDRDC 178
G K + GT+ S++ + KP+++ ++L + AL S+V+RD
Sbjct: 134 GNYNYEK-YAAQGTSSSLITSIFDCQINGNNCLVKPEIKSLEDLVNIIKNALASAVERDI 192
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
+G V I + I+ R+D
Sbjct: 193 YTGDSAQVVICDGIVHEPVIMDLRID 218
>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
Length = 236
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G N IA+D RL + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRI 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++ GL + K + + D I
Sbjct: 91 LSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYSYDPI 150
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E+ K + G+AG L Y E + + + + S+ +RD
Sbjct: 151 GHCEITK-YRAGGSAGALLQPLLDNQIGYKNQEGVESVPLTQERAVAIIKDVFTSAAERD 209
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G + I+T I+ R D
Sbjct: 210 IYTGDSIFIKIITSDGIQNFNFALRKD 236
>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
Length = 223
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG VA+ G + +A+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M A L+S LY KRF PY+ V+ G +E K + T D
Sbjct: 72 KVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYD 131
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQALL 171
++G+ E + G+ + + + K P + P E + V
Sbjct: 132 AVGSYEKV-GYSAQGSGAKLIMPVLDNQLKSPSPLLLPALDAVTPLTEAEAIDVVKDVFA 190
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + IV I+ + R D
Sbjct: 191 SATERDIYTGDKLEIVIVNADGIRREYAELRKD 223
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+++R+ T+++ +++ + D+L I +G+ D Q L + L
Sbjct: 8 GATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L ++ A L+S +++ +RF P+F + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNAKSYELEMKKKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGV-DEEGPHLIVMDPLG 126
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + ++ GT + + ++ DM +E + QAL ++++RD +SG G +
Sbjct: 127 SL-IEDNYAALGTGAKLAAAVLDGNYRNDMSIEEAKKLAVQALKAAIERDPVSGGGIDLV 185
Query: 188 IVTPTEIKE 196
+V +E
Sbjct: 186 VVDEKGARE 194
>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG VA+ G + +A+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M A L+S LY KRF PY+ V+ G +E K + T D
Sbjct: 72 KVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYD 131
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQALL 171
++G+ E + G+ + + + K P + P E + V
Sbjct: 132 AVGSYEKV-GYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDAVTPLTEAEAIDVVKDVFA 190
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + IV I+ + R D
Sbjct: 191 SATERDIYTGDKLEIVIVNADGIRREYAELRKD 223
>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
Length = 237
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL + ++ + + +G SG D+ TL +
Sbjct: 32 NGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFSLSNTTILGCSGCWCDTLTLTRL 91
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 92 LSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPI 151
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + G+AG L Y E + + ++ + S+ +RD
Sbjct: 152 GHCE-KTTYRAGGSAGALLQPLLDNQIGYKNQEGVTPTPVTQEKAVAILKDVFTSAAERD 210
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G G + I+T IK+ R D
Sbjct: 211 IYTGDGITIKIITKDGIKDSSFALRKD 237
>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
queenslandica]
Length = 223
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ IASD RL Q + DF + ++ D + +G G D TL +
Sbjct: 17 WNGGTVLAVSGEDFSVIASDTRLSEGFQIYSRDFPKTYQLGDNVVLGSCGFQGDVTTLNK 76
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + K+Y ++ M E+ A L+S +LY +RF PY+ ++AGL + K + + D
Sbjct: 77 VIEAQLKIYDHIYQKKMSCESLAQLLSTILYTRRFFPYYTYNILAGLDSKGKGCVFSFDP 136
Query: 126 IGAKELAKDFVVAGTAGESLYGAC----------EAMFKPDMEPDELFETVSQALLSSVD 175
IG+ E ++ AG + S+ + K + ++ + V+ S+ +
Sbjct: 137 IGSYE--REVYRAGGSASSMLQPLLDNQIGLLNQTGVEKKPLSVEKAVQLVTDVFTSAAE 194
Query: 176 RDCLSGWGGHVYIVTP--TEIKERILK 200
RD +G G + I++ +IKE L+
Sbjct: 195 RDIYTGDGIRINIISADGVDIKEVPLR 221
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGSHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKP---------DME--------PDELFETVSQ 168
+G + +D AG G+ AM +P +ME ++ + V
Sbjct: 151 VGPYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKD 201
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE + R D
Sbjct: 202 VFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237
>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 234
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGAKE 130
D++G+ E
Sbjct: 128 YDAVGSYE 135
>gi|2511568|emb|CAA73616.1| multicatalytic endopeptidase [Arabidopsis thaliana]
gi|3421107|gb|AAC32068.1| 20S proteasome beta subunit PBC1 [Arabidopsis thaliana]
Length = 70
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 40/42 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI 42
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQ +
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQNL 42
>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
Length = 236
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL + ++ + + +G SG D+ TL +
Sbjct: 31 NGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFPLSNTTILGCSGCWCDTLTLTRL 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 91 LSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPI 150
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + G+AG L Y E + + ++ + S+ +RD
Sbjct: 151 GHCE-KTTYRAGGSAGALLQPLLDNQIGYKNQEGVTPAVLTQEKAVAILKDVFTSAAERD 209
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G G + I+T IK+ R D
Sbjct: 210 IYTGDGISIKIITKDGIKDSSFALRKD 236
>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQ 168
+G+ E +D AG G+ AM +P ++ ++ + V
Sbjct: 152 VGSYE--RDNFKAG-------GSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKD 202
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT IKE+ ++ R D
Sbjct: 203 VFISAAERDVYTGDALKICIVTKDGIKEQSIQLRKD 238
>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
hirsutus]
Length = 229
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IASD RL +I K+ + +G +D T +
Sbjct: 24 NGGSIVAVGGDDFVIIASDTRLSTGYSIYTRHQSKIFKLSKISALACAGCWSDVLTFTRL 83
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R ++Y ++M A ++S ++Y KRF PY+ ++ GL + +I + D I
Sbjct: 84 INARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILGGLEKDGSGWIYSYDPI 143
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E +K F G++G L + E + + ++ V +S+ +RD
Sbjct: 144 GNMERSK-FRAGGSSGALLQPLLDNQLGFANMENVESRSISLEKALAVVRDVFISAAERD 202
Query: 178 CLSGWGGHVYIVTPTEIKERILK 200
+G HV ++T EIKE L+
Sbjct: 203 IYTGDKIHVTVITKDEIKEDTLQ 225
>gi|257205830|emb|CAX82566.1| 20S proteasome subunit beta 3 [Schistosoma japonicum]
Length = 98
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLY 64
QT+Y
Sbjct: 61 QTVY 64
>gi|168010847|ref|XP_001758115.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690571|gb|EDQ76937.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 51
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 41/51 (80%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGL 53
IT YNGSAL+AMV KNC AIASDRRLGV QTIA DF RI KI+D L+I L
Sbjct: 1 ITSYNGSALIAMVEKNCLAIASDRRLGVNFQTIACDFLRIFKIYDNLYISL 51
>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
Length = 221
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D R+ V + D+ +I ++ D+ + SG D + L
Sbjct: 10 ENNGGTCVAIAGLDYCVVAADTRMSVGYSILTRDYSKICQLADKSILASSGFQGDIKALQ 69
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M L+S LY KR PY+ V+AGL +E K + T D
Sbjct: 70 KNLAAKHLIYQHQHNKQMSCPAMGQLLSNTLYYKRXXPYYAFNVLAGLDNEGKGCVFTYD 129
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQALL 171
++G+ E + G+ + + K P + P E + V
Sbjct: 130 AVGSYERVG-YSAQGSGSTLIMPVLDNQLKSPSPLLLPAKDAVTPLSESEAVDMVKDVFA 188
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + ++ + I+ ++ R D
Sbjct: 189 SATERDIYTGDRLEIVVIDASGIRREFIELRKD 221
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL + ++ + D +G SG D+ TL +
Sbjct: 32 NGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTILGCSGCWCDTTTLTRL 91
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 92 LSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPI 151
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + G+AG L Y E + + ++ + S+ +RD
Sbjct: 152 GHCE-KTTYRAGGSAGALLQPLLDNQIGYKNQEGVTPAPLTQEKAIAILKDVFTSAAERD 210
Query: 178 CLSGWGGHVYIVTPTEIK 195
+G G + I+T I+
Sbjct: 211 IYTGDGITIKIITKDGIE 228
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+D R + + D Q++ ++H + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTDEGVVLATDMRASLGPMVSSKDVQKVEEVHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ D+D I ++D G
Sbjct: 109 RAEVRLYESRRGEDMSMQALSTLVGNFLRTGGF--YIVQPILGGV-DDDGAHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E F D+ DE + ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFSDDLSIDEAKQVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 10/208 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ + IG SG D TL +
Sbjct: 30 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDCLTLTK 89
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+ +S +LY +RF PY+ +I GL +E K + + D
Sbjct: 90 IIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 149
Query: 126 IGAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDR 176
+G+ + + G+A L + E + + ++ + V +S+ +R
Sbjct: 150 VGSYQRGT-YKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLNQEKAVQLVKDVFISAAER 208
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + IVT IKE + R D
Sbjct: 209 DVYTGDALRICIVTKEGIKEETVPLRKD 236
>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
Length = 221
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 14/215 (6%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LQKNLAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQA 169
D++G+ E + GT + + K P + P E + V
Sbjct: 128 YDAVGSYERT-GYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKGV 186
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + ++ K + R D
Sbjct: 187 FASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V +A+++R + + +++ +I DR+ + +G D+Q+L + +
Sbjct: 11 GTTTVGLVFDEGIVLATEKRATMGTLIASKTAKKVYQIADRIGMTTAGGVGDAQSLARLM 70
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY++R + + A+L+S L + R+ PY+ Q ++ G+ D + P + ++D++G
Sbjct: 71 QVECSLYKVRHGKPISVGAAATLLSNYLQQNRYYPYYVQLLVGGV-DRNGPSVYSVDAMG 129
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
D V G+ YG E + DM E + +++L +++ RD SG +
Sbjct: 130 GASKETDIVSTGSGSPMAYGVLEDRYHADMNEPEAVDLATRSLKAAMRRDSASGENISIV 189
Query: 188 IVTPTEIKERILK 200
++T + +E+ ++
Sbjct: 190 VITRDKYEEKAVQ 202
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G+N ASD R+ + +++++ ++ + + +G D+QTL +
Sbjct: 18 NGGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMASAGFMADAQTLKKT 77
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y+ + ++ + +FA ++S LY +RF PY+ ++AGL E K + T D++
Sbjct: 78 LKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAV 137
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
G+ E S G+ +A+ P + D +TVS +L +V
Sbjct: 138 GSYE---------RTNYSCQGSGQALIMPVL--DNQLKTVSPLVLPAV 174
>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
Length = 235
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL D ++ ++ D +G SG D+ TL +
Sbjct: 30 NGGSVVAIAGDDFVVIGADTRLSAGFSIYTRDQNKLFRLSDTTVLGCSGCWCDTLTLTRI 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++YQ + M A ++S +LY KRF PY+ ++ GL +E K I + D I
Sbjct: 90 LSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYISNILVGLDNEGKGCIYSYDPI 149
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMF---------KPDMEPDELFETVSQALLSSVDRD 177
G E + G+AG L + + + + +S+ +RD
Sbjct: 150 GHCE-KTTYRAGGSAGALLQPLLDNQIGLKNMQNVKDSKLTLERAAAIIKDVFISAAERD 208
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G + I+T IKE + R D
Sbjct: 209 IFTGDNILINIITKDGIKEDSFQLRKD 235
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++ G+ V +V ++ +A+DRR + A + +I +I +RL I +G D +L
Sbjct: 4 KFKGTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLV 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +LY+ R R M + A+L++ +L R+ PY ++ G +D P + ++D
Sbjct: 64 RLLRAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVWFLVGGY--DDAPRLYSVD 121
Query: 125 SIGAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G + +D +V AG+ E + ++ +KP+M +E + +A+ S++ RD +G G
Sbjct: 122 MAGG--ITEDKYVAAGSGMEFAFSILDSQYKPEMSVEEGVKLAVRAINSAIKRDVFTGEG 179
Query: 184 GHVYIVTPTE 193
+ +VT TE
Sbjct: 180 --ITVVTITE 187
>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
Length = 223
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L +
Sbjct: 14 NGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M L+S LY KRF PY+ V+ GL E K + T D++
Sbjct: 74 LASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
Length = 235
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSS 173
IG E A + GTAG L + K + D S +S+
Sbjct: 146 PIGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKDRAVSVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+ R L R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEVRTLSLRKD 235
>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
Length = 231
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L +
Sbjct: 22 NGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKV 81
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH YQ + + M A L+S LY KRF PY+ V+ GL E K + T D++
Sbjct: 82 LSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 141
Query: 127 GAKE 130
G+ E
Sbjct: 142 GSYE 145
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D+R + ++I KI D + + +GL D+Q L L
Sbjct: 13 GTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQVLADVL 72
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L ++ M + A+ +S +L+ RF PY Q ++ G + P + ++D G
Sbjct: 73 RMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIVQLLVGGF--DTAPRLYSLDWFG 130
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
++F+V G+ G EA + P+M+ +EL +A+ ++ RD SG G V
Sbjct: 131 TVA-EEEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAVFAATRRDTASGEGIDVA 189
Query: 188 IVTPTEIKER 197
++ I R
Sbjct: 190 VIDRNGITMR 199
>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_a [Homo sapiens]
Length = 219
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R
Sbjct: 18 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 77
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 130
K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+ +
Sbjct: 78 LKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQ 137
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQALLSS 173
+D AG G+ AM +P ++ D V +S+
Sbjct: 138 --RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISA 188
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + IVT I+E + R D
Sbjct: 189 AERDVYTGDALRICIVTKEGIREETVSLRKD 219
>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
Length = 237
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L +
Sbjct: 14 NGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH YQ + + M A L+S LY KRF PY+ V+ GL E K + T D++
Sbjct: 74 LSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
Length = 232
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ I +D RL + +++ K+ +R +G +G D+ TL +
Sbjct: 27 NGGSVVAIAGEDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 87 LQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGKGCIYSYDPI 146
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + + G+AG L + + + + ++ + +S+ +RD
Sbjct: 147 GHCERST-YRAGGSAGAQLQPLLDNQIGLKNMQNVSEAPVPKEKALALLKDVFISAAERD 205
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G ++ I+T I+E + R D
Sbjct: 206 IYTGDCIYIIIITANGIQEEKFELRKD 232
>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Apis florea]
Length = 237
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G +++A+ G N IA+D RL + Q++ + + +G SG D+ TL + L
Sbjct: 33 GKSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLXPLSSKTVLGCSGCWCDTLTLTRIL 92
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
R ++Y+ +++M A ++S +LY KRF PY+ ++ GL + K + + D IG
Sbjct: 93 SARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYSYDPIG 152
Query: 128 AKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
E+ K + G+AG L Y E + + + + S+ +RD
Sbjct: 153 HCEITK-YRAGGSAGALLQPLLDNQIGYKNQEGVEPVPLTQERAVAIIKDVFTSAAERDI 211
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
+G + I+T I+ R D
Sbjct: 212 YTGDSIFIKIITSDGIQNFSFALRKD 237
>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
Length = 223
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L +
Sbjct: 14 NGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH YQ + + M A L+S LY KRF PY+ V+ GL E K + T D++
Sbjct: 74 LSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
Length = 230
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA+ G++ IASD RL ++ + ++ K+ ++ +G+SG D T +
Sbjct: 25 NGGTIVAVAGEDFAIIASDTRLIQGYSILSREQTKLFKLSEQTVLGVSGCWCDVLTFTRT 84
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y + M A LVS +LY KRF PY+ ++AGL + K + + D +
Sbjct: 85 LEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYVSNIVAGLDQDGKGTLYSYDPV 144
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + + G AG L + P++ ++ + + +S+ +RD
Sbjct: 145 GHCEKNR-YRAGGAAGAMLQPLLDNQVGLKNMKGELLPNITKEKALMVIKDSFISAAERD 203
Query: 178 CLSGWGGHVYIVTPTEIK 195
+G G + I+T I+
Sbjct: 204 TSTGDGVIINIITKAGIE 221
>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
gi|194701432|gb|ACF84800.1| unknown [Zea mays]
gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
gi|223974469|gb|ACN31422.1| unknown [Zea mays]
gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGAKE 130
D++G+ E
Sbjct: 128 YDAVGSYE 135
>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
Length = 199
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++A N IA+D RL Q I T F ++ K+ D+ +G SG+ D L
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + +LY+ R+ A L+S +LY +RF PY+ ++ G+ ++ K +C D+
Sbjct: 73 VLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDA 132
Query: 126 IGAKELAKDFVVAGTAG-------ESLYGACEAMFKPDMEP-DELFETVSQALLSSVDRD 177
+G K + GT+ ++L KP++ ++L V A++S+V+RD
Sbjct: 133 VGNYNYEK-YTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVERD 191
Query: 178 CLSG 181
+G
Sbjct: 192 ICTG 195
>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
Length = 231
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + I +D RL ++ ++ DR + +G D+ L
Sbjct: 24 ESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRMSDRTVLASTGCWCDTLALT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + +++M A ++S L+Y +RF PY+ V+AGL + K I + D
Sbjct: 84 SLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDADGKGVIYSYD 143
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF---------KPDMEPDELFETVSQALLSSVD 175
IG E + G+AG L + ++ D+ + +S+ +
Sbjct: 144 PIGHCE-KTTYRAGGSAGPLLQPVLDNQIGLKNMVNVAPTPVQLDKAISIIKDTFISATE 202
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + I+T IKE I++ R D
Sbjct: 203 RDIYTGDSVIINIITKDGIKEEIVQLRKD 231
>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG VA+ G + +A+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIYKLADKCLMASSGFQADVRALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M A L+S LY KRF PY+ V+ G +E K + T D
Sbjct: 72 KVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYD 131
Query: 125 SIGAKE 130
++G+ E
Sbjct: 132 AVGSYE 137
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +V + G N +A D RL + D +I K+ ++ F+G G D TL +
Sbjct: 30 NGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTEKTFLGTCGFQGDVLTLTRL 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R +Y+ + M + ++S +LY +RF PY+ ++AG+ + K I + D++
Sbjct: 90 LNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYTFNILAGIDTDGKGCIYSYDAV 149
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + +GTA L Y E + + + D+ + +S+ +RD
Sbjct: 150 GNYE-KHTYHASGTASSMLQPLLDNQVGYLNQEGVRRVPLTIDKARTLIKDVFISATERD 208
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G H+ +T + E R D
Sbjct: 209 MYTGDSLHIVTITSDGVTEDHFPLRRD 235
>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
Length = 192
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L +
Sbjct: 6 NGGTCVAVAGADYCVIAADTRMSSGYNILTRDYSKIIKLADKCVLASSGFQADVKALQKV 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M L+S LY KRF PY+ V+ GL +E K + T D++
Sbjct: 66 LAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAV 125
Query: 127 GA 128
G+
Sbjct: 126 GS 127
>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
Length = 232
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL + +++ K+ +R +G +G D+ TL +
Sbjct: 27 NGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 87 LQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGKGCIYSYDPI 146
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + + G+AG L + + + + ++ + +S+ +RD
Sbjct: 147 GHCERST-YRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPVPKEKALALLKDVFISAAERD 205
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G ++ I+T I+E + R D
Sbjct: 206 IYTGDCIYIIIITANGIQEEKFELRKD 232
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E F+ + +E ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E F+ + +E ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGINIA 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q L + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R +++ P + A+L+S +L+ R P+ Q +I G P + ++D +G
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLMSNILHGSRMFPFLTQLIIGGYDFLYGPRLFSLDPVG 129
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
F G+ + YG E + DM + +AL+S+++RD SG G +
Sbjct: 130 GLNEESYFTATGSGSPTAYGVLELEYSRDMLLKDGLNLSVKALMSAMERDAFSGNGISLA 189
Query: 188 IVTPTEIK 195
V +K
Sbjct: 190 YVNKEGVK 197
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ A++RR + +I KI D + ++G +D+Q L +
Sbjct: 9 GTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYI 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+LR M E A++ S +L+ RF PY+ Q ++ G+ DE P + ++D G
Sbjct: 69 SAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGV-DEKGPALFSLDPSG 127
Query: 128 AKELAKDFVVAGTAGESL-YGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
+ KD +++ +G + YG E + +M+ +E V +A+ ++++RD SG G V
Sbjct: 128 G--VIKDLMISTGSGSPVAYGVLEDRYNQEMDIEEGTSVVIRAIKAAMERDTYSGNGIKV 185
Query: 187 YIVTPTE 193
+T E
Sbjct: 186 ATITKEE 192
>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
Length = 231
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + I +D RL ++ ++ + + +G D+ L
Sbjct: 24 ESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRLSEGTVLASTGCWCDTLALT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + +++M A ++S L+Y +RF PY+ V+AGL +E + + + D
Sbjct: 84 SLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDEEGRGVVYSYD 143
Query: 125 SIGAKELAKDFVVAGTAGESLYGACE------AMFKPDMEPDELFETVS---QALLSSVD 175
IG E + G+AG L + M EP +L + VS +S+ +
Sbjct: 144 PIGHCE-KTTYRAGGSAGPLLQPVLDNQIGLKNMVGASTEPVQLAKAVSIIKDTFISATE 202
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + I+T IKE +++ R D
Sbjct: 203 RDIYTGDSVIINIITKDGIKEEVVQLRKD 231
>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
Length = 223
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + ++ +IS++ ++ + SG D + L +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKISQLAEKSVMASSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH +YQ + + M A L+S LY KRF PY+ V+ GL E K + T D++
Sbjct: 74 LSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 1 MSITEYN-----GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSG 55
+S +EY+ G+ V ++ K+ +A+D+R + + +++ KI D + + ++G
Sbjct: 2 ISNSEYHKEYMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAG 61
Query: 56 LATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
D+Q+L + + K+Y++R +M P + +L+S +L+ R P Q ++ G
Sbjct: 62 SVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLI 121
Query: 116 DKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
+ + ++D +G F G+ + YG EA ++ D+ D+ +AL S++
Sbjct: 122 NGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQ 181
Query: 176 RDCLSGWG 183
RD SG G
Sbjct: 182 RDAYSGNG 189
>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
Length = 218
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++A N IA+D RL Q I T F ++ K+ D+ +G SG+ D L
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + +LY+ R+ A L+S +LY +RF PY+ ++ G+ ++ K +C D+
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDA 132
Query: 126 IGAKELAKDFVVAGTAG-------ESLYGACEAMFKPDMEP-DELFETVSQALLSSVDRD 177
+G K + GT+ ++L KP++ ++L V A++S+V+RD
Sbjct: 133 VGNYNYEK-YTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVERD 191
Query: 178 CLSG 181
+G
Sbjct: 192 ICTG 195
>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
Length = 236
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++VA+ G + +A+D RL +T F ++ D+LF +G SG D
Sbjct: 31 NGGSVVALAGDDFCVVAADTRL-------STGFSIYTRQQDKLFPLSKTTILGCSGCWCD 83
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
+ TL + L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K
Sbjct: 84 TLTLTRLLSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNILAGLDENGKGC 143
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQAL 170
I + D IG E + G+AG L Y E + ++ ++ +
Sbjct: 144 IYSYDPIGHCE-KTTYRAGGSAGALLQPLLDNQIGYKNQEGITPVNLTQEKAVAILKDVF 202
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G G + I+T I++ R D
Sbjct: 203 TSAAERDIYTGDGITIKIITKDGIQDISFALRKD 236
>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
Length = 232
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 26/215 (12%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ IASD RL + ++ K+ ++ +G +G D T +
Sbjct: 27 NGGSIVAIAGEDFAVIASDSRLSTGYSIYTREQSKLFKLSNQCVLGSTGCWCDILTFTRF 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y R M A LV +LY KRF PY+ ++AGL ++ K I D +
Sbjct: 87 LEARMKMYLHEHHRLMSTPAVAQLVVTMLYNKRFFPYYISNILAGLDEDGKGCIYCYDPV 146
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP---------DMEPDEL--------FETVSQA 169
G E V AG G+ A+ +P +ME EL +
Sbjct: 147 GHCER-----VQYRAG----GSSSALLQPLLDNQIGFKNMENVELVPPTRERAVNIIKDV 197
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+SS +RD +G + I+ IKE +L R D
Sbjct: 198 FISSAERDIYTGDSVVINIIDKNGIKEEMLALRRD 232
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 5 EYN-GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EY G+ V + K+ +A+++R+ ++++ +++ ++DR+ + +G+ D QT+
Sbjct: 4 EYGIGATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALASAGVIADMQTI 63
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L K+Y+L R A L+S +++ +R P+ + ++ G DE+ P I +
Sbjct: 64 AKILRVNAKMYELESRRKPSIAAMAKLLSVIMFNRRIMPFIAEVLVGGY-DEEGPHIFVL 122
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
D +G+ + D+ GT + +A + D++ + A+ ++++RD +SG G
Sbjct: 123 DPVGSL-IEDDYAALGTGAKMAISILDANYSKDVDVSGARKLAINAIRAALERDPVSGGG 181
Query: 184 GHVYIVTPTEIKERILK 200
+ VT + E +K
Sbjct: 182 IDLVTVTADGVSEEEIK 198
>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
Length = 283
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E+NG +A+ G + +A+D RL + ++ + ++ + R +G +G TD L
Sbjct: 77 EFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLR 136
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L + K+Y + M + A ++ LY KRF PY+ V+AG+ E K + + D
Sbjct: 137 SVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYD 196
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDELFETVSQALLSSVDR 176
+IG+ E F +G+ L + + + D+ +E+ E V A L++ +R
Sbjct: 197 AIGSFERTP-FSASGSGQSFLIPLMDNVISHKNRLDERRDLPAEEVVEIVKDAFLTAGER 255
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + ++T I ++ + + D
Sbjct: 256 DIYTGDAVDIMVITKDGIDKQTFQLKAD 283
>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
Length = 241
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ +A+D RL + +ISK+ D+ IG SG+ +D +TL+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L+ L A L+ +LY +RF PY+ ++AG+S+E+K + D+I
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNENKGVLYNYDAI 156
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDM-----EPDELFET-----------VSQAL 170
G+ A S G+ A+ P + + ++L + V A+
Sbjct: 157 GS---------YCEATHSCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDIDFVKDAI 207
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G +YI+ + L+ + D
Sbjct: 208 TSATERDIYTGDKTEIYIIDHMGVNTTTLELKQD 241
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L +
Sbjct: 49 GTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSI 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM E ++L+ L F + QP++ G+ D+D P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMEALSTLLGNFLRSGGF--FIVQPILGGV-DDDGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + +++ V G+ + G E + D+ +E ++++ S+V+RD SG G +V
Sbjct: 166 SI-IEEEYTVTGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVERDLASGNGINVC 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
Length = 232
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL D +++ K+ + +G +G D+ TL +
Sbjct: 27 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL + K + + D I
Sbjct: 87 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 146
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G +F G+A L + + + + ++ + +S+ +RD
Sbjct: 147 G-HCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDVFISAAERD 205
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G ++ I+T + I+E + R D
Sbjct: 206 IYTGDSIYILIITASGIQEEKFELRKD 232
>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 280
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 9/208 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E+NG +A+ G + +A+D RL + ++ + ++ + ++ +G +G TD L
Sbjct: 74 EFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLR 133
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L + K+Y + M + A ++ LY KRF PY+ V+AG+ E K + + D
Sbjct: 134 SVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYD 193
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDELFETVSQALLSSVDR 176
+IG+ E F +G+ L + + K ++ +E+ E V A L++ +R
Sbjct: 194 AIGSFERTP-FSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFLTAGER 252
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G + ++T I+ K + D
Sbjct: 253 DIYTGDAVEIMVITAKGIESETFKLKAD 280
>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
Length = 235
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSS 173
IG E A + GTAG L + K + + S +S+
Sbjct: 146 PIGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLADADKIKLTKERAVSVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+ R L R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
morsitans morsitans]
Length = 236
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ ++ +G +G D+ L
Sbjct: 26 ESNGGSIVAIAGNDFAVIAADSRLSSGYTIHTRNENKLFQLSSNAVLGSTGCWCDTLALT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S L+Y +RF PY+ V+AGL+ E K + + D
Sbjct: 86 ALVKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYVSNVLAGLNSEGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAM------------FKPDMEPDELFETVSQALLS 172
IG E + G+AG L + F ++ + S A +S
Sbjct: 146 PIGHFEKSNS-RAGGSAGALLQPVLDNQIGLKNIKMEHIGFPAELTKERAVAIASDAFIS 204
Query: 173 SVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ +RD +G + I+T + I+ + L+ R D
Sbjct: 205 ATERDIYTGDSVQINIITKSGIEVKELQLRKD 236
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 21 AIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
+AS++RL ++ + ++I I + + +G +GL D L + L K Y+L+ R
Sbjct: 20 VLASEKRLTYDGFVLSRNARKIHMITNHIGVGFAGLMGDVNFLVKVLRLEAKNYELQHGR 79
Query: 81 DMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGT 140
++K + A L+S +LY + P + V+ G DE+ P + +D +G+ + + +V G+
Sbjct: 80 EIKTRSLAKLLSVILYSYKLAPMLTEVVVGGY-DEEGPSLYILDPVGSV-IEEKYVAVGS 137
Query: 141 AGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ G E + P + E E A+ + ++RD LSG G
Sbjct: 138 GAQLALGYIEPRYNPGLGLKEAEELAVNAVKTVIERDVLSGDG 180
>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome 26 kDa subunit; Flags: Precursor
gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
Length = 235
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSS 173
IG E A + GTAG L + K + + S +S+
Sbjct: 146 PIGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+ R L R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 223
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +I ++ ++ + SG D Q L +
Sbjct: 14 NGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQLAEKSVMASSGFQADVQALQKH 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L +H +YQ + + M L+S LY KRF PY+ V+ GL E K + T D++
Sbjct: 74 LKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGLDSEGKGCVYTYDAV 133
Query: 127 GAKE 130
G+ E
Sbjct: 134 GSYE 137
>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 196
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 40 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 99
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 100 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 159
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDEL 162
+G+ + +D AG G+ AM +P ++ +L
Sbjct: 160 VGSYQ--RDSFKAG-------GSASAMLQPLLDNLDL 187
>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
Length = 225
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG VA+ G +A D R V I T FQ R+ ++ D L IG SG D+ L +
Sbjct: 12 NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVK 70
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R LY ER M ++ A +V LLY KRF PY+ +AG+ E K I + D
Sbjct: 71 RIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDP 130
Query: 126 IGAKE 130
+G+ E
Sbjct: 131 VGSYE 135
>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
Group]
gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
Length = 219
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V ++ D +I+ + D+ + SG D +
Sbjct: 6 VYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKA 65
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L + LY+ + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 66 LQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 125
Query: 123 MDSIGAKE 130
D++G+ E
Sbjct: 126 YDAVGSYE 133
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+I+ G+AL + K+ +A+D+R+ ++ + +++ ++DR+ I L+GL D
Sbjct: 1 MAISYEQGTAL-GIKAKDGVVLATDKRMSYGSFIMSRNAKKVYLLNDRVGIALTGLYADV 59
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
L + + Y+ E M + L S +LY + P+ + +I GL + KP I
Sbjct: 60 SGLVRIMNAEISYYETTNETTMSLYAISKLFSNILYSYKMLPFLIESIIGGLDRDGKPKI 119
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
T+D++G+ K ++ G+ G + G E + ++ DE + AL ++++RD S
Sbjct: 120 YTLDALGSVTEDK-YMAVGSGGTTALGVLEYSYNDNLTIDEAEKIAITALKTTMERDSSS 178
Query: 181 GWGGHVYIV 189
G G + I+
Sbjct: 179 GDGIDLLII 187
>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
Length = 233
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL ++ K+ + +G +G +D+ +L
Sbjct: 24 ESNGGSIVAIAGEDFAVIAADTRLSSGYNIHTRTQNKLFKLSENSVLGSTGCWSDTLSLT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R ++Y+ + M + A ++S +Y +RF PY+ ++AG+ + K + + D
Sbjct: 84 GLLKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYVSNILAGVDKDGKGVVYSYD 143
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK-----------PDMEPDELFETVSQALLSS 173
IG E A + GTAG L + P + D +S+
Sbjct: 144 PIGHCERAT-YRAGGTAGPLLQPVLDNQIGYKNQNLSQDELPKLSIDRAVAVAFDTFISA 202
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T EIK + L R D
Sbjct: 203 AERDIYTGDSVIINIITKDEIKSQELPLRKD 233
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Query: 36 ATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALL 95
+T Q+I +I DR+ + +G+ D+Q+L + + KLY ++ M SL+S +L
Sbjct: 7 STTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTSLLSNVL 66
Query: 96 YEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKP 155
+R+ P+ Q ++ G+ D+ P + ++D++G + V G+ + YG EA++ P
Sbjct: 67 ASRRYFPFMVQLLLGGV-DKKGPQLFSLDALGGSIQEQKVVATGSGSPTAYGVLEALYDP 125
Query: 156 DMEPDELFETVSQALLSSVDRDCLSG 181
+M +E + +A+ +++ RD SG
Sbjct: 126 EMTVEEGMKLGVRAIHNAMKRDSASG 151
>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY + F PY+ +I GL + K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVYNIIGGLDEHGKGAVYSFDP 150
Query: 126 IGAKELAKDFVVAGTAGESL----------YGACEAMFKPDMEPDELFETVSQALLSSVD 175
+G+ + +D AG + ++ + E + + D+ + V +S+ +
Sbjct: 151 VGSYQ--RDTYKAGGSASAVLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDVFISAAE 208
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD G V I+T I E+ + R D
Sbjct: 209 RDVYIGDALRVCIITKEGISEQTVPLRKD 237
>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
Length = 214
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G + IA D RL ++ + +++ + D++ SG+ D Q L +
Sbjct: 14 NGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLIKH 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ Y L+ ++++ E F L+SA++Y +R P++ ++AG+ E K + + D I
Sbjct: 74 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAVYSYDVI 133
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDE-------LFETVSQALLSSVDRDCL 179
G+ L + AGT + C + + + +E FE + A S +RD
Sbjct: 134 GST-LRTRYGSAGTGNAMI---CPILDEAILSKNEAEITREFAFELIQSAFRSCAERDIY 189
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+G ++ I+ER + R D
Sbjct: 190 TGDSVVAMCISADGIQERTFELRKD 214
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A++RR + + ++I +I DR+ + +G D+Q + + +
Sbjct: 10 GTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQIVRII 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KL+++R + + +L+S LL +R+ P Q ++ G+ D+ P + ++D +G
Sbjct: 70 SVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGV-DKTGPNMYSLDPLG 128
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + V G+ YG E + DM DE E +AL +++ RD SG G V
Sbjct: 129 GRIEETNIVATGSGSPITYGLLEDRYHKDMTSDEGAELAIRALHNAMKRDSASGDGIDVV 188
Query: 188 IVTPTEIKE 196
++T K+
Sbjct: 189 VITKDGYKQ 197
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L + +
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLIRSI 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R +M ++L+ L F Y QP++ G+ DED P I ++D G
Sbjct: 109 RAEVRLYESRRGENMSMTALSTLLGNFLRSGAF--YVVQPILGGV-DEDGPHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E + + DE ++A+ S+V+RD SG G ++
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEYNDALSIDEAKTVAARAVKSAVERDLASGNGINIC 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA+ G + +A+ R+ + + +I +++ + I +G+ D +TL++
Sbjct: 30 NGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIASAGMQADQETLHKV 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH YQ + M A L+S LY KRF PY+ + AGL DE + + T D+I
Sbjct: 90 LHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNLCAGLDDEGRGAVYTYDAI 149
Query: 127 GA------------KELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
G+ KEL + + S + + ++ + V A +S+
Sbjct: 150 GSYERVGYGCQGNGKELVQPVLDNQLKAASPLALPPQQWLSSLPLEQAVDLVKGAFVSAG 209
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T IK L+ + D
Sbjct: 210 ERDIYTGDDVEILIITKDCIKTDRLELKRD 239
>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Brachypodium distachyon]
Length = 221
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I ++ + I SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICELXRKCVIASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + +
Sbjct: 68 LQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 127
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQA 169
D++G+ E + GT + + K P + P E + V
Sbjct: 128 YDAVGSYERT-GYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAVDLVKDV 186
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + ++ + ++ R D
Sbjct: 187 FASATERDIYTGDKVEIVVINKAGTRREYIELRKD 221
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 1 MSITEYN-GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATD 59
MS EY G+ V + K+ +AS++R+ ++ +++ K+ DR+ I +GL D
Sbjct: 1 MSYAEYGIGATTVGIRVKDGVVLASEKRVSYGGFIVSKAGKKVFKVTDRIGIAFAGLYAD 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
Q L + L + Y++ + + A L+S +LY + P+ + ++ G+ DE
Sbjct: 61 MQALARILSAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITEVLVGGV-DETGSH 119
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
+ MD +G+ + D+ G+ G EA ++ DM DE E +A+ +++RD +
Sbjct: 120 LYVMDPVGSV-IEDDYAALGSGAAIAIGILEANYRKDMSIDEAKELAEKAVRIAIERDAI 178
Query: 180 SGWGGHVYIV 189
SG G + ++
Sbjct: 179 SGDGIDILVI 188
>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
Length = 235
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSS 173
IG E A + GTAG L + K + + S +S+
Sbjct: 146 PIGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKEWAVSVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+ R L R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ V ++ + +A+D+R + ++I + + + + +SGL D+Q L
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L +LY++ + ASL+S +L+ +F PY Q ++ G + +P + T+D
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGY--DTQPRLYTLDLF 141
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G+ K + G+ YG E ++ D+ +E + + A+ S+V RD SG G V
Sbjct: 142 GSITEDK-YTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGADV 200
Query: 187 YIVTPTEIKERIL 199
++ P +E+ +
Sbjct: 201 VVIGPQGYEEKFI 213
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS+RR+ ++ ++ I ++ +GL D Q L ++
Sbjct: 8 GATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVADMQILSLQI 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +R++ P T A ++S ++YE+RF P Q ++ GL DKP I T+D +G
Sbjct: 68 SALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGGLV--DKPVIYTLDPLG 125
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L D+ GT E G + +K ++ E + +++ +++ RD SG V
Sbjct: 126 SV-LPDDYAAVGTGAEMALGILDQQYKKELNETEATDLAVKSIRAAILRDSASGDNIDVL 184
Query: 188 IVTPTEIKE 196
++ KE
Sbjct: 185 VINKYGAKE 193
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G++ A+D R+ + D+++I ++ D+ + +G D+ TL +
Sbjct: 20 NGGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLASAGFMADAVTLKKT 79
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y+ + ++ M +FA ++S LY +RF PY+ ++AGL E K + T D++
Sbjct: 80 LKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAEGKGAVFTYDAV 139
Query: 127 GAKE 130
G+ E
Sbjct: 140 GSYE 143
>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
Length = 235
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + D ++ ++ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFVVIAADTRLSSGYSIHSRDQSKLFEMSPKTVLGSTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S ++Y +RF PY+ ++AGL + K + + D
Sbjct: 86 GLVKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK-----------PDMEPDELFETVSQALLSS 173
IG E A + G+AG L + P + + S +S+
Sbjct: 146 PIGHCERAT-YRAGGSAGALLQPVLDNQIGYKNQNLSLDQLPPLTKERAVAVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I++R L+ R D
Sbjct: 205 AERDIYTGDSVLINIITADGIEKRELQLRKD 235
>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
Length = 219
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL V ++ D +I+ + D+ + SG D + L
Sbjct: 8 ENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + LY+ + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 68 RNLAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYD 127
Query: 125 SIGAKE 130
++G+ E
Sbjct: 128 AVGSYE 133
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
N IA ++RL ++ + +++ I + IG +GL D+Q + + L + Y+L+
Sbjct: 27 NGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRMEAENYELQ 86
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKD-FV 136
R+++ A ++S +LY + P + V+ G DE P I +D +G+ L +D +V
Sbjct: 87 LGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGF-DEKGPQIYVLDPVGS--LIEDKYV 143
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
G+ G G E ++ D++ DE + A+ +++RD +SG G V +T
Sbjct: 144 ALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVDVLRIT 197
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V K+ +A+DRR + ++ + ++ I D L + +G D +L +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ + ++M + A+L S +L+ RF PYF +IAG + E P + ++D
Sbjct: 66 LRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGWFLIAGHTGE--PGLYSVDMA 123
Query: 127 GAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + +D F AG+ E + EA FK +M +E + +A+ ++ RD + GG
Sbjct: 124 GG--VTEDRFTAAGSGMEFAFSILEAEFKENMTLEEGVKLALRAIKAATRRDVFT--GGG 179
Query: 186 VYIVTPT-----EIKERILKGRMD 204
V +VT T E E +KG ++
Sbjct: 180 VTLVTVTDEGYKEWSEEEIKGLLE 203
>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 229
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G++ + SD RL D + K+ +G G D TL +
Sbjct: 24 NGGTCLAIAGEDFVVVGSDTRLSQGFSIFTRDLPKTYKLTTSTVLGACGFHGDVLTLTKV 83
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+++ + M A+++S +LY +RF PY+ +IAGL +E K + + D +
Sbjct: 84 LNARLKMFEHEHHKKMTTSEIAAMLSTMLYHRRFFPYYVYNLIAGLDEEGKGVVYSFDPV 143
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP-----------------DMEPDELFETVSQA 169
G+ G+ G G+ AM +P + +++ V
Sbjct: 144 GS---------YGSDGYRARGSAAAMLQPLLDNQIGLKNQQNVQRVSLSKEKVVNLVKDV 194
Query: 170 LLSSVDRDCLSGWGGHVYIVT 190
+S+ +RD +G V+++T
Sbjct: 195 FISAAERDIYTGDAVVVHVIT 215
>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
Length = 232
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ GK+ +A+D R + + K+ + I ++G D TL +
Sbjct: 26 NGGTSVAIAGKDFCIVAADTRQSTGYNINSRFAPKAYKLSETSVIAMNGFHADGLTLKKV 85
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y+ ++DM A ++S LY+KRF PY+ V+ G+ +E K + D+I
Sbjct: 86 LDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCYDAI 145
Query: 127 GAKELAKDFVVAGTAGESLY---------GACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G+ E K +G+A + + + D+E DE + V A S+ +RD
Sbjct: 146 GSYEREK-CRASGSAAALIQPFLDNQVSKKNMQNVSTEDIELDEAIKIVKDAFTSATERD 204
Query: 178 CLSGWGGHVYIV---TPTEIKERILK 200
+G ++I+ P EI+ LK
Sbjct: 205 IYTGDNLQIFIIRKDQPVEIQVHPLK 230
>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
Length = 219
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL V ++ D +I+++ D+ + SG D + L
Sbjct: 8 ENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKIAQLADKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+AGL + K + T D
Sbjct: 68 KALTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYD 127
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
++G+ E G S G A+ P + D ++ S LL + D
Sbjct: 128 AVGSYE---------RTGYSAQGTGSALMMPVL--DNQLKSPSPLLLPARD 167
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G++ A D R+ + F++I K+ + + +G A D+ TL +
Sbjct: 24 NGGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKMSGKTLMASAGFAADAVTLKKT 83
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y+ + +R++ FA ++S LY +RF PY+ ++AGL E K + T D++
Sbjct: 84 LKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAV 143
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALL 171
G+ E S G+ +A+ P + D +TVS +L
Sbjct: 144 GSYE---------RTNYSCQGSGQALIMPVL--DNQLKTVSPLVL 177
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ ++G+ V + KN +A+D+R + ++I KI D + ++GL D+Q
Sbjct: 9 SLKAFHGTTTVGFITKNAVILAADKRATAGTLIASRTVKKIVKITDYAAMTIAGLVADAQ 68
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + +LY+ +R + + A+L++ +L+ ++ PY Q ++ G E P +
Sbjct: 69 MLADAIREEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQLIVGGYDTE--PRLY 126
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+D G+ K G+ G E ++PD+ +E ++A+ ++ RD +G
Sbjct: 127 NLDYFGSITEEK-MTSTGSGSPVALGVLEKDYRPDLSLEEAMNLAAKAIKVAIMRDSATG 185
Query: 182 WGGHVYIVTPTEIKERIL 199
G V ++ I+E +
Sbjct: 186 DGVDVIAISSGGIRESFI 203
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIH---DRLFIGLSGLATDSQTL 63
NG +A+ G + IA D R Q + + + + K+H + + G+ DSQTL
Sbjct: 26 NGGTTLAIAGDDFCVIAGDTR---QSEGYSINTRYAPKVHEMRNGTVLATGGMFADSQTL 82
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+R+ R + YQ + +++M A ++S +LY KRF PYF + GL + K + T
Sbjct: 83 MKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSVGGLDEHGKGCVYTY 142
Query: 124 DSIG------------AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALL 171
D +G A +L + F+ + GA +++ P +E + V A
Sbjct: 143 DPVGNYERVSWDCGGSAGKLIQPFLDNQIGKHHMSGASKSL--PSLE--TVKRIVKDAFT 198
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G ++++T I + +L ++D
Sbjct: 199 SATERDIYTGDFLEIFVITKDGITKEMLPLKLD 231
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 1 MSITEYN-----GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSG 55
+S +EY+ G+ V ++ K+ +A+D+R + + +++ KI D + + ++G
Sbjct: 2 ISNSEYHKEYMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAG 61
Query: 56 LATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
D+Q+L + + K++++R +M P + +L+S +L+ R P Q ++ G
Sbjct: 62 SVGDAQSLIRIISAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLI 121
Query: 116 DKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
+ + ++D +G F G+ + YG EA ++ D+ D+ +AL S++
Sbjct: 122 NGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQ 181
Query: 176 RDCLSGWG 183
RD SG G
Sbjct: 182 RDAYSGNG 189
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V ++ +A+DRR ++I KI D + + +GL D+Q L +
Sbjct: 14 KGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEW 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L Y++ +R M A +S +L+ +F PY Q ++ G + +P + +D
Sbjct: 74 LANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGY--DTQPRLYNIDWF 131
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G+ K +V G+ + G E + P++ +E E +A+ SS+ RD +G G V
Sbjct: 132 GSVTEEK-YVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGVDV 190
Query: 187 YIV 189
++
Sbjct: 191 VVI 193
>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
Length = 235
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSHQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSS 173
IG E A + GTAG L + K + + S +S+
Sbjct: 146 PIGHCEKAT-YRAGGTAGTLLQPVLDNQIGHKNMNLADADKIKLTKERAVSVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+ + L R D
Sbjct: 205 AERDIYTGDSVLINIITNDGIEVQTLPLRQD 235
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +AS++R + ++I +I R+ + +G D+Q L + +
Sbjct: 10 GTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLARLM 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY++R + + + ++L+S +L+ R P++ Q +I G+ DE P + ++D++G
Sbjct: 70 TVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGV-DETGPVLFSVDAVG 128
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
V G+ YG E + M+ E +AL S++ RD SG G V
Sbjct: 129 GTGKEDGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRALRSAIKRDAGSGEGVAVV 188
Query: 188 IVT 190
++T
Sbjct: 189 VIT 191
>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
Length = 226
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 14/213 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL + + ++ K+ D + SG D +TL
Sbjct: 15 ENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQ 74
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 75 KNLEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYD 134
Query: 125 SIGAKELAKDFVVAGTAGE--------SLYGACEAMFKP-----DMEPDELFETVSQALL 171
++G+ E + G+ E L A ++ P + E E V
Sbjct: 135 AVGSYERT-GYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFA 193
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +R +G G + ++ I + L + D
Sbjct: 194 SATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
Length = 291
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++ L
Sbjct: 36 NGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYK--PKVFRLNDKATLATNGFAADAEALV 93
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R+ R ++Y+ R M + A ++S +LY KRF PY+ ++ GL +E K + + D
Sbjct: 94 SRVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAVYSFD 153
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFK-----PDM---EP-----DELFETVSQ 168
+G+ E ++F A A +SL + + MFK P+ EP E+ + V
Sbjct: 154 PVGSYE--REFCRAAGAAQSLIQPFFDNQIMFKNQTSTPEHKVPEPGQMTLPEVLKIVVD 211
Query: 169 ALLSSVDRDCLSGWGGHVYIV-TP 191
+ S+ +R G G V++V TP
Sbjct: 212 SFTSATERHIEVGDGLEVFVVRTP 235
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G++ A+D R+ + D+++I K+ ++ + +G D+ TL +
Sbjct: 11 NGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKIEKMTEKCVMASAGFMADAVTLKKT 70
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y+ + ++M +FA ++S LY +RF PY+ ++AGL E K + T D++
Sbjct: 71 LKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDKEGKGAVFTYDAV 130
Query: 127 GAKE 130
G+ E
Sbjct: 131 GSYE 134
>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
10D]
Length = 244
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G++ +A+D RL V + +F +I ++ D+ + +G+ D Q L++
Sbjct: 34 NGGTVLALAGRDYAIVAADTRLSVGFSIPSRNFTKIVQLTDQAVLASAGMGADRQYLHKI 93
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
L R ++Y+ + +++M A L+S LY +RF P + V+ G+ ++ + F+ D+
Sbjct: 94 LRSRLEIYRYQHQKEMSLGAIAQLLSNTLYSRRFFPIYAFNVLGGIDANTGEGFVFGYDA 153
Query: 126 IGAKELAKDFVVAGTAGESL--------------YGACEAMFKPDMEPDELFETVSQALL 171
IG+ E K VV +G++L Y + + E E
Sbjct: 154 IGSFEKVK--VVCSGSGQTLVQPVLDQQLAGRQKYDVPDDQRMASLSLAEAIELTRDVFN 211
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIK 195
S+ +RD L+G +Y VT + ++
Sbjct: 212 SAAERDILTGDALELYAVTASGVR 235
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 95/194 (48%), Gaps = 1/194 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ +A++ R + + ++I +I R+ + +G D+Q L + L
Sbjct: 11 GTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITPRIGLTTAGGVGDAQQLVRIL 70
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
L+++R + M ++L+S L + R+ PY+ Q ++ G DE P + ++D++G
Sbjct: 71 QVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDDEG-PSVYSVDAMG 129
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+D V G+ YG E ++ M+ D+ + +A+ S++ RD SG V
Sbjct: 130 GATKEEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRAVRSAMRRDSASGEDIMVV 189
Query: 188 IVTPTEIKERILKG 201
++T + +E I G
Sbjct: 190 VITKDKYEEHIESG 203
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 101/193 (52%), Gaps = 2/193 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I D+L I +G+ D Q+L + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L + + A L+S +++ +R+ P+F + ++ G+ DE+ + MD +G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGV-DEEGSHLIVMDPLG 126
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + ++ GT + + ++ D+ + + +AL ++++RD +SG G +
Sbjct: 127 SL-IEDNYAALGTGAKLAISVLDTGYREDITLQDAKKLAVKALKAAIERDPVSGGGIDLV 185
Query: 188 IVTPTEIKERILK 200
++ T KE +K
Sbjct: 186 LIDQTGAKEEEVK 198
>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
Length = 219
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG +A+ G + +A+D RL + ++ D +IS++ D+ + SG D + L
Sbjct: 8 ENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+AGL + K + T D
Sbjct: 68 KALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYD 127
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
++G+ E G S G A+ P + D ++ S LL + D
Sbjct: 128 AVGSYE---------RTGYSAQGTGSALMMPVL--DNQLKSPSPLLLPARD 167
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 101/193 (52%), Gaps = 2/193 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I D+L I +G+ D Q+L + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L + + A L+S +++ +R+ P+F + ++ G+ DE+ + MD +G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGV-DEEGNHLIVMDPLG 126
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + ++ GT + + ++ D+ + + +AL ++++RD +SG G +
Sbjct: 127 SL-IEDNYAALGTGAKLAISVLDTGYREDITLQDAKKLAVKALKAAIERDPVSGGGIDLV 185
Query: 188 IVTPTEIKERILK 200
++ T KE +K
Sbjct: 186 LIDQTGAKEEEVK 198
>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 219
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ I SD RL + ++ K+ D +G SG D+ L +
Sbjct: 14 NGGSIVAIAGEDFAVIGSDTRLSSNYSIFTRNQSKLFKLSDTTVLGCSGCWCDTLQLTKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + ++Y + M + ++S LLY KRF PY V+AGL D+ K + + D I
Sbjct: 74 VRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLVYNVLAGLDDQGKGCVYSYDPI 133
Query: 127 GAKELAKDFVVAGTAGESL---------YGACEAMFKPDMEPDELFETVSQALLSSVDRD 177
G E + F G++G L Y E + K + ++ + +++ +RD
Sbjct: 134 GHCERST-FRAGGSSGALLQPLLDNQLGYHNMENVKKEQLTLEKALSVLKDVFIAAAERD 192
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G +Y++ IK R D
Sbjct: 193 IYTGDSIAIYVIKKDGIKSENFDLRKD 219
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ IASD RL Q D ++ K+ +G SG D TL +
Sbjct: 23 FNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDCLTLTK 82
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R ++Y+ + M A ++S +LY +RF PY+ ++AGL E K + + D
Sbjct: 83 HISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILAGLDSEGKGCVFSFDP 142
Query: 126 IGAKELAKDFVVAGTAGESL----------YGACEAMFKPDMEPDELFETVSQALLSSVD 175
+G+ E ++ AG + +L + E + + D+ V S+ +
Sbjct: 143 VGSYE--REVYRAGGSASALLQPLLDNQIGFKNQEGVPHTPLTRDKAVALVKDVFTSAAE 200
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + +V+ + E R D
Sbjct: 201 RDIYTGDAVIINVVSSEGVSEEAFPLRRD 229
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G + IA D RL ++ + +++ + D++ SG+ D Q L +
Sbjct: 54 NGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKH 113
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ Y L+ ++++ E F L+SA++Y +R P++ ++AG+ E + + + D I
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGRGAVYSYDVI 173
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDE-------LFETVSQALLSSVDRDCL 179
G+ + G+AG C + + + +E FE + A S +RD
Sbjct: 174 GSTLRTR----YGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSAFRSCAERDIY 229
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+G ++ I+ER + R D
Sbjct: 230 TGDSVVAMCISADGIQERTFELRKD 254
>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
Length = 219
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG +A+ G + +A+D RL + ++ D +IS++ D+ + SG D + L
Sbjct: 8 ENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+AGL + K + T D
Sbjct: 68 KALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYD 127
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
++G+ E G S G A+ P + D ++ S LL + D
Sbjct: 128 AVGSYE---------RTGYSAQGTGSALMMPVL--DNQLKSPSPLLLPARD 167
>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
Length = 241
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ +A+D RL + +ISK+ D+ IG SG+ +D +TL+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L+ L A L+ +LY +RF PY+ ++AG+S++ K + D+I
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVLYNYDAI 156
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDM-----EPDELFET-----------VSQAL 170
G+ A S G+ A+ P + + ++L + V A+
Sbjct: 157 GS---------YCEATHSCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDLDFVKDAI 207
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G +YI+ + L+ + D
Sbjct: 208 TSATERDIYTGDSTEIYIIDQMGVNTTSLELKQD 241
>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
Length = 560
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 9 SALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLV 68
S ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + +
Sbjct: 357 STVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIE 416
Query: 69 FRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+
Sbjct: 417 ARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 476
Query: 129 KELAKDFVVAGTAGESLYGACEAMFKP-----------------DMEPDELFETVSQALL 171
+ +D AG G+ AM +P + D V +
Sbjct: 477 YQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRALRLVRDVFI 527
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + IVT ++E L R D
Sbjct: 528 SAAERDVYTGDALRICIVTQEGVREETLPLRRD 560
>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
Iowa II]
Length = 246
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D RL + + + ++ ++ + SG+ D L +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L+ + KLY+ + A L+S +LY KRF PY+ +++GL ++ K + D++
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQGKGVVYGYDAV 162
Query: 127 GAKELAKDFVVAGTAG--------ESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
G+ + K FV G+ G + G + F+ ++ + V ++ S+ +RD
Sbjct: 163 GSFDQHK-FVALGSGGSLITSILDNQISGNNQTSFES-IDKVGIINIVKDSITSASERDV 220
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
+G V ++ + I L+ R D
Sbjct: 221 HTGDSAEVIVIDSSGISVSSLRLRED 246
>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
Length = 226
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 14/213 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL + + ++ K+ D + SG D +TL
Sbjct: 15 ENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQ 74
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 75 KNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYD 134
Query: 125 SIGAKELAKDFVVAGTAGE--------SLYGACEAMFKP-----DMEPDELFETVSQALL 171
++G+ E + G+ E L A ++ P + E E V
Sbjct: 135 AVGSYERT-GYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFA 193
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +R +G G + ++ I + L + D
Sbjct: 194 SATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ + + ++ +A+D+R+ ++ +F++I I+DR+ I +GL D L +
Sbjct: 3 FAGATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVR 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + +L L + A +S+LLY +F P+ + ++ G+ +P + +D
Sbjct: 63 IVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDP 122
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G+ + +D+V AGT + +G E ++K M +E + +AL +S+ RD +G G
Sbjct: 123 LGSI-IEEDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTGDGID 181
Query: 186 VYIVTPTE-------IKERILKG 201
V +V P IK R+++G
Sbjct: 182 V-LVLPVSGKPSLETIKFRLVEG 203
>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Ixodes ricinus]
Length = 232
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ IASD RL D ++ K+ D+ +G G D T +
Sbjct: 27 NGGSIVAIAGEDFVVIASDSRLSAGYHIYTRDQSKLFKLSDKCILGSGGCWCDILTFTRF 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y + M A L+ +LY KRF PY+ ++AGL +E K I + D +
Sbjct: 87 LEARMKMYLHEHHKPMSTPAVAQLIVTMLYHKRFFPYYISNILAGLDEEGKGCIYSYDPV 146
Query: 127 GAKELAKDFVVAGTAGESL 145
G E + +G +G +L
Sbjct: 147 GHCERVQ--YRSGGSGSAL 163
>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
H]
Length = 241
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ +A+D RL + +ISK+ D+ IG SG+ +D +TL+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRYCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L+ L A L+ +LY +RF PY+ ++AG+S+++K + D+I
Sbjct: 97 LKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDNKGVLYNYDAI 156
Query: 127 GAK-ELAKDFVVAGTA------GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
G+ E V +G A + + + + + + V A+ S+ +RD
Sbjct: 157 GSYCEATHSCVGSGAALIFPILDNRMEQKNQLIKNLNFNLRDDIDFVKDAITSATERDIY 216
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+G +YI+ +K L + D
Sbjct: 217 TGDQTEIYIIDQMGVKTTTLDLKQD 241
>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
Length = 238
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 26/215 (12%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + + GK+ IASD RL ++ D ++ + +G SG D T +
Sbjct: 33 NGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFVRV 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
R K Y ++M A ++S LY KRF PY+ V+AGL DE + I T D +
Sbjct: 93 AESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTYDPV 152
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP-----------------DMEPDELFETVSQA 169
G E K S GA M +P D+ DE V
Sbjct: 153 GHCEKVK---------ISCGGASMEMIQPILDNVIEKKNMTNAELVDLSIDETVNIVHDC 203
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +R +G G I+T I+ + + R D
Sbjct: 204 FISAAERQIQTGDGVVFKIITKDGIETKRVGLRRD 238
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + + Q++ +IH + ++G + +Q+L + +
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIHPTGALTIAGSVSAAQSLIRSI 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++L+ L F Y QP++ G DE I ++D G
Sbjct: 109 RAEVRLYESRRGEDMSMQALSTLLGNFLRSGAF--YIVQPILGGFDDE-GAHIYSIDPAG 165
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ L +++ V G+ + G E + D+ +E T ++A+ S+V+RD SG G +V
Sbjct: 166 SI-LEEEYTVTGSGSQYALGVLEQEYSNDLSIEEAKTTAARAIKSAVERDLASGNGINVC 224
Query: 188 IVT 190
+VT
Sbjct: 225 VVT 227
>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
Length = 238
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 26/215 (12%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + + GK+ IASD RL ++ D ++ + +G SG D T +
Sbjct: 33 NGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFIRV 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
R K Y ++M A ++S LY KRF PY+ V+AGL DE + I T D +
Sbjct: 93 AESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTYDPV 152
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP-----------------DMEPDELFETVSQA 169
G E K S GA M +P D+ DE V
Sbjct: 153 GHCEKVK---------ISCGGASMEMIQPILDNVIEKKNMTNAELVDLSIDETVNIVHDC 203
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +R +G G I+T I+ + + R D
Sbjct: 204 FISAAERQIQTGDGVVFKIITKDGIETKRVGLRRD 238
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V K+ +A+DRR + ++ + ++ +I D L + +G D +L +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRL 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ + R++ + A+L S +L+ RF PYF +IAG ++KP + ++D
Sbjct: 66 LRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGY--DEKPALYSLDMA 123
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G K F AG+ E + E +K D+ +E + +A+ + RD +G G +
Sbjct: 124 GGVTEDK-FTAAGSGMELAFAVLEDGYKDDINVEEGVKLALKAIKIATRRDVFTGDG--I 180
Query: 187 YIVTPTE 193
+VT TE
Sbjct: 181 TLVTVTE 187
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V ++ +A+DRR + + + ++ ++ D L I +GL D +L +
Sbjct: 2 KGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRL 61
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ R R+M + A+LVS +L+ R+ PYF +I G + +P + ++D+
Sbjct: 62 LRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGY--DVRPRLYSIDAA 119
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + F+ AG+ E E F M+ +E + +A+ +++ RD +G G V
Sbjct: 120 GGVT-EERFIAAGSGMEFALALLEENFSDGMDLEEGVDLAVRAVKAAMRRDVYTGEGVTV 178
Query: 187 YIVTPTEIKE 196
+T +E
Sbjct: 179 VTITKEGYRE 188
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S + G+ V +V ++ +A+DRR + + + ++ +I D L I +GL D
Sbjct: 4 SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAGAGLVGDIL 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
+L + L KLY+ + R+M + A+LVS +L+ R PYF +I G + KP +
Sbjct: 64 SLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGSRHLPYFAWFLIGGY--DVKPRLY 121
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
++D+ G + F+ AG+ E E F M DE + +A+ +++ RD +G
Sbjct: 122 SIDAAGGVT-EERFIAAGSGMEFALALLEENFSDGMGLDEGIDLAVRAVKAAIRRDVYTG 180
Query: 182 WGGHVYIVTPTEIKE 196
G V +T +E
Sbjct: 181 EGVTVVAITKEGYRE 195
>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
Length = 226
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 14/213 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL + + ++ K+ D + SG D +TL
Sbjct: 15 ENNGGTCVAIAGLDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQ 74
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 75 KNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYD 134
Query: 125 SIGAKELAKDFVVAGTAGE--------SLYGACEAMFKP-----DMEPDELFETVSQALL 171
++G+ E + G+ E L A ++ P + E E V
Sbjct: 135 AVGSYERT-GYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFA 193
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +R +G G + ++ I + L + D
Sbjct: 194 SATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
+ +AS++RL +++ +++ I + +G +GL D L + L K Y+L
Sbjct: 14 REGVVLASEKRLTYDGFVLSSSVKKVYAITPHVGVGFAGLMGDVNILKRMLEMEAKYYEL 73
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFV 136
+ R+++ A ++S +LY + P + V+ G D++ P + +D +G+ + + +
Sbjct: 74 QHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGY-DDNGPQLYILDPVGSL-IEEKYA 131
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
G+ + G E + PD+ +E + V +A+ + ++RD LSG G + +T +E
Sbjct: 132 ALGSGAQLALGYIEPRYNPDISLEEAEKLVVEAVKTVIERDVLSGDGVDILKITAKGPEE 191
Query: 197 R 197
+
Sbjct: 192 K 192
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A+++RL ++ + ++I + D + +G +GL D L + L K Y+L+ R+
Sbjct: 21 LAAEKRLSYDGFVLSRNARKIHMVTDHVGVGFAGLMGDVGFLVKVLRLEAKNYELQHGRE 80
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
++ + A L+S +LY + P + V+ G DE P + +D +G+ + + +V G+
Sbjct: 81 IRARSMAKLLSLILYNYKLAPMLTEVVVGGFDDEG-PSLYILDPVGSL-IEEKYVAVGSG 138
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ G E + P + E E A+ + V+RD LSG G
Sbjct: 139 AQLALGYIEPRYSPSITLAEAEELAVNAIRTVVERDVLSGDG 180
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V K+ +A+DRR ++I I +R+ I +G D Q +Y L
Sbjct: 18 GTTTVGLVVKDAVVLAADRRASAGFFVANKMVRKILYIDERIGITTAGSVADLQFIYNYL 77
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ + R + + A+ ++ +L + ++ PY Q +I G + +P + +D +G
Sbjct: 78 KNIYHYNYISGNRPVTVKALATYLTNILSQSKYFPYLVQILIGGY--DVQPRLFNLDYLG 135
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ +V G+ G E ++P M PDE E ++A+LS++ RD +G G
Sbjct: 136 -DMTEETYVATGSGSPVAMGVLEDGYRPSMTPDEAVELATRAVLSAIKRDSFTGTG 190
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 91/188 (48%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +A+D+R + + +++ KI D + + ++G D+Q+L + +
Sbjct: 14 GTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLVRII 73
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+LR ++ P + A L+S +L+ R P+ Q +I G + ++D++G
Sbjct: 74 SAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLFSLDAVG 133
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
F G+ + +G E +K DM ++ ++L +++ RD SG G +
Sbjct: 134 GLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLAIKSLTAAMKRDAFSGNGISLA 193
Query: 188 IVTPTEIK 195
++ +K
Sbjct: 194 VIDKNGVK 201
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 1 MSITEYN-----GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSG 55
+S +EY+ G+ V ++ + +A+D+R + + +++ KI D + + ++G
Sbjct: 2 ISNSEYHKEYMKGTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAG 61
Query: 56 LATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
D+Q+L + + K+Y++R +M P + +L+S +L+ R P Q ++ G
Sbjct: 62 SVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLI 121
Query: 116 DKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVD 175
+ + ++D +G F G+ + YG E+ +K D+ ++ +AL S++
Sbjct: 122 NGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVKALSSAMQ 181
Query: 176 RDCLSGWG 183
RD SG G
Sbjct: 182 RDAYSGNG 189
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ AS+RR + ++I KI+D + ++G D+Q L + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LYQ+R M + AS+ + +L R GP + Q ++ G+ D DKP + ++D G
Sbjct: 68 EAEVSLYQMRNNDKMSVKAAASVTANIL---RSGPMYVQTLLGGM-DGDKPSLYSLDPAG 123
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ ++ G+ YG E + ++ DE E +A+ ++ +RD SG G V
Sbjct: 124 GM-IEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLVA 182
Query: 188 IVT 190
VT
Sbjct: 183 KVT 185
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V K+ +A+DRR + ++ + ++ I D L + +G D +L +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ R ++M + A+L S +L+ RF PYF +IAG ++KP + ++D
Sbjct: 66 LRAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGWFLIAG--HDEKPGLYSIDMA 123
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G K F AG+ E + E ++ DM + + +A+ ++ RD + GG V
Sbjct: 124 GGVTEDK-FTAAGSGMEFAFSILEENYREDMPLEGGVKLALRAIKAATRRDVFT--GGGV 180
Query: 187 YIVTPT 192
+VT T
Sbjct: 181 TLVTVT 186
>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
Length = 232
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ GK+ +A+D R + + K+ + I ++G D TL +
Sbjct: 26 NGGTSVAIAGKDFCIVAADTRQSTGYNINSRFSPKAYKLSETSVIAMNGFHADGLTLKKV 85
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y+ ++DM A ++S LY+KRF PY+ V+ G+ +E K + D+I
Sbjct: 86 LDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCYDAI 145
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP-----------------DMEPDELFETVSQA 169
G+ E K G+ A+ +P D+E DE + V A
Sbjct: 146 GSYEREK---------CRASGSAAALIQPFLDNQVSKKNMQNVSLEDIELDEAIKVVKDA 196
Query: 170 LLSSVDRDCLSGWGGHVYIV---TPTEIKERILK 200
S+ +RD +G ++I+ P +++ LK
Sbjct: 197 FTSATERDIYTGDNLQIFIIRKDQPVDVQIHPLK 230
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + + +A+++R+ ++ +++ +I D + I +GL D Q+L R
Sbjct: 8 TGATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAAAGLFADMQSL-SR 66
Query: 67 LVFRHKLY-QLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +Y +L M+ A L+SA+LY + P+ + + AG DE+ + +D
Sbjct: 67 IISAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGF-DEEGYHLYVLDP 125
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G+ + D+ GT G E+ +K + D+ E +++ +++ RD +SG G
Sbjct: 126 VGSI-IEDDYAAIGTGASIAIGVIESEYKNTLTIDQATELAIKSVKAAISRDAVSGDGID 184
Query: 186 VYIVTPTEIKER 197
+ +VT I ER
Sbjct: 185 IAVVTNNGINER 196
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 5 EYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
E NG +A+ G + +A+D R LG +QT + ++ K+ D+ I +G+ +D+ T
Sbjct: 16 EDNGGTTLAIPGPDYVIVAADTRMSLGYSIQTRKS--TKLCKLTDKCVIASAGMQSDAAT 73
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R Y+ + + M ++S +LY +RF PY+ ++AGL + K + +
Sbjct: 74 LHKVLKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFPYYTFNLVAGLDTDGKGIVFS 133
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGAC---EAMFK-------PDMEPDELFETVSQALLS 172
D+IG+ + + V + +G++L + FK D+ ++ V A S
Sbjct: 134 YDAIGSYQSVE--VGSQGSGQTLIQPLLDNQVAFKNHLLVPNTDLTLEQSLSIVKDAFTS 191
Query: 173 SVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ +RD +G + I+T IK IL+ + D
Sbjct: 192 AGERDIYTGDSVEILIITKEGIKTEILELKKD 223
>gi|399219027|emb|CCF75914.1| unnamed protein product [Babesia microti strain RI]
Length = 214
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A + + +D RL V + +++++ DR+ IG +G+ D+ L+++
Sbjct: 10 NGGTVIAAAKDDFAVLVADTRLSVGYSIHSRRVSKVTRLTDRIIIGTAGMNADTIALHKQ 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +YQ + + + L+S +LY KRF PY+ ++ G+ + + ++ T D+I
Sbjct: 70 LEAQVTIYQNKHHENPDIHCISQLLSVILYGKRFFPYYTFNLLVGIDMKGQAYVFTYDAI 129
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMF-----KPDMEPDELFETVS---QALLSSVDRDC 178
G E + + GT + ++ K P+ L + V+ A+ S+ +RD
Sbjct: 130 GNFE-STAYSAHGTGSNLITSILDSKIGCNNQKQGTPPNTLEDYVNLLKDAISSAAERDI 188
Query: 179 LSGWGGHVYIVTPT 192
+G ++I+ P
Sbjct: 189 YTGDSAEIFILNPN 202
>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
Length = 193
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG +V + G++ IA D R V I T F R+ ++ D+L +G +G D+ TL +
Sbjct: 12 NGGTIVGIAGEDFSIIAGDTR-NVNGYNINTRFSPRVHEVGDKLILGATGFEADALTLVK 70
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R LY +R M P + + +V +LY KRF PY+ ++AGL ++ + + D
Sbjct: 71 RIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYVYTLVAGLDEKGVGALYSFDP 130
Query: 126 IGAKE 130
+G+ E
Sbjct: 131 VGSYE 135
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + ++ +AS++R + + ++I + DR+ + +G+ D+Q L + +
Sbjct: 10 GTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVRIM 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY++R M + ++L+S ++ +R+ PY Q +I G+ D D + T+D G
Sbjct: 70 TVELQLYKIRRNEPMTVKGISTLLSNVMNGQRYYPYIVQLLIGGI-DRDGAHLYTIDPFG 128
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ G+ YG E + D+ ++ QAL S++ RD SG V
Sbjct: 129 GNTEESEIAATGSGSPIAYGVLENKYTKDISLEKGTALAIQALYSAIKRDSASGEAIEVV 188
Query: 188 IVT 190
+T
Sbjct: 189 TIT 191
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V ++ +A++RR + + +++ +I DR+ + ++G D+Q L +
Sbjct: 10 KGTTTVGLLFDGGVVLATERRATMGNMIASKKAKKVYQIADRIGMTIAGGVGDAQQLARL 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ L+ +R R + A+L+S +L + R PY+ Q ++ G+ D P I ++D++
Sbjct: 70 MQVECSLFNIRRGRPIAVGAAATLLSNVLNQNRMFPYYVQLLVGGI-DRYGPSIYSVDAL 128
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G V G+ YG E F+ M E + +AL S++ RD SG +
Sbjct: 129 GGASPEDRIVATGSGSPFAYGVLEDRFEEGMSEKECLDLAIRALRSAMKRDSASGEDISI 188
Query: 187 YIVTPTEIKERILKG 201
++T + +E + G
Sbjct: 189 VVITKDKYEELMESG 203
>gi|429965350|gb|ELA47347.1| hypothetical protein VCUG_01116 [Vavraia culicis 'floridensis']
Length = 201
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS E G+ +VAM +A+D R + + +++K+ R++ SG ++ +
Sbjct: 1 MSEYEMTGTTIVAMKFDGGVIMAADSRTSMGAYVMNRVTNKLTKLSPRIYCCRSGRSSHT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVI-AGLSDEDKPF 119
Q + + + L+ ER+ A+LV AL+Y + P +I AG +E+K
Sbjct: 61 QIIAEYTSSKTNLFAYSNEREPLVRDAANLVRALVY---YNPMLTASIIVAGYDEEEKGS 117
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
I +++ +G L +++ + G+ +YG C++M++ DM DE FE + + +++RD
Sbjct: 118 IYSVN-LGGTLLKREWAMGGSGSIFIYGYCDSMYRSDMSFDEKFELTKKLVQLAINRDNS 176
Query: 180 SG 181
SG
Sbjct: 177 SG 178
>gi|315425045|dbj|BAJ46718.1| proteasome endopeptidase complex [Candidatus Caldiarchaeum
subterraneum]
Length = 187
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
Query: 9 SALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLV 68
+ +V + + +ASDRR + Q+I K+ D L I ++GL +D+ L +
Sbjct: 2 TTIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVR 61
Query: 69 FRHKLYQLREERDMKPETFASLVSALLYE--KRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
KL LR + + L+S L Y + + PY+ + ++AG+ DE P + + D
Sbjct: 62 AERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEG-PHVFSSDMS 120
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G+ +A++FV +G+ YG E+++ P ++ +E +A+ +++ RD SG G
Sbjct: 121 GSM-VAEEFVSSGSGSPVAYGVLESLYTPGLKLEEARAIAVKAVEAAMQRDPGSGNG 176
>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
antarctica T-34]
Length = 292
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++ L
Sbjct: 35 NGGSIAAVCGSDFCVIASDTRQSTGYNIQTRYK--PKVFRLNDKATLATNGFAADAEALV 92
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R+ R ++Y+ R M + A ++S +LY KRF PY+ ++ GL ++ K + + D
Sbjct: 93 SRIRQRLEMYRHAHGRSMPLHSIARMISTMLYGKRFFPYYVYNILGGLDEQGKGAVYSFD 152
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFK-----PD--------MEPDELFETVSQ 168
+G+ E ++F A A +SL + + MF+ P+ M E+ + V
Sbjct: 153 PVGSYE--REFCRAAGAAQSLIQPFFDNQIMFRNQSDTPERKVPTPGQMTLPEVLKIVID 210
Query: 169 ALLSSVDRDCLSGWGGHVYIV-TP 191
+ S+ +R G G V++V TP
Sbjct: 211 SFTSATERHIEVGDGLEVFVVRTP 234
>gi|385303180|gb|EIF47271.1| proteasome component c5 [Dekkera bruxellensis AWRI1499]
Length = 243
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + ++ + D L + +G + D L +
Sbjct: 30 NGGTILGIAGEDFAVLAGDTRQTVGYSIDSRYEPKVHNVGDNLLLSANGFSADGVQLVKV 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ K Y +DM ++ A L+ LLY KR PY+ ++AGL E K I + D +
Sbjct: 90 FQNQLKWYHFDNNKDMSVDSAARLIQHLLYGKRMFPYYVSTILAGLDKEGKGAIYSFDPV 149
Query: 127 GAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVSQ 168
G+ E ++ AG A SL + + FK M+P DE+ + V
Sbjct: 150 GSYE--REQCRAGGAAASLIMPFLDNQVNFKNQMDPESNGTKQRPIKYLKLDEVIQLVRD 207
Query: 169 ALLSSVDRDCLSGWGGHVYIVT 190
A S+ +R G G + +VT
Sbjct: 208 AFTSATERHIEVGDGLQILVVT 229
>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 229
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
+NG ++AM G + IASD RL G + T R S + RL + + +D +L
Sbjct: 27 FNGGTIMAMAGDDYAIIASDTRLSEGFSIHT------RDSPKNYRLXVISIHICSDWPSL 80
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L R K+Y+ + M A+++S +LY +RF PY+ ++AGL +E K + +
Sbjct: 81 TKVLTARLKMYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSF 140
Query: 124 DSIGAKELAKDFVVAGTAGESLYGAC---------EAMFKPDMEPDELFETVSQALLSSV 174
D +G+ E + + AG++ L E K + D+ V +S+
Sbjct: 141 DPVGSYE-RETYRAAGSSSALLQPLLDNQIGGKNQEGWVKEPIPVDKAVALVKDVFISAA 199
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G G ++++T KE R D
Sbjct: 200 ERDIYTGDGIVLHVLTKDGCKEERFPLRRD 229
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
Length = 210
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 2/197 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +A+++R + + ++I +I D + + +G D+Q L + +
Sbjct: 9 GTTTVGIVCSDGVVLATEKRATMGNFIASKTAKKIYQIDDLVGMTTAGSVGDAQQLVRMI 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R + + + +L+S +L +R+ P Q ++ G+ D++ P I ++D++G
Sbjct: 69 SVESKLYKMRRQESITIKGLTTLLSNILGGQRYFPLMVQLLVGGV-DKNGPAIFSLDAMG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
V G+ YG E + + DE E +AL +++ RD SG G V
Sbjct: 128 GNIEETKAVATGSGSPMAYGVLEDRYHEGINVDEGMELAVRALYNAMKRDSASGNGIDVV 187
Query: 188 IVTPTEIKERILKGRMD 204
+T K RI G +D
Sbjct: 188 KITADGYK-RIETGEVD 203
>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
Length = 243
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ + D L I +G A D L +R
Sbjct: 30 NGGTVLGIAGEDFAILAGDTRHTTGYSINSRYEPKVFSVGDELLITANGFAADGDALVKR 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ K Y ++++ ++ A + LLY KRF PY+ +IAGL +E K + + D +
Sbjct: 90 FRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPV 149
Query: 127 GAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVSQ 168
G+ E ++ AG SL + + FK M+P DE+ V
Sbjct: 150 GSYE--REQCRAGGGAASLIMPFLDNQVNFKNQMDPDSNGTAKKELKYLKLDEVISLVRD 207
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIK 195
A S+ +R G G + IVT ++
Sbjct: 208 AFSSATERHINVGDGLEILIVTKDGVR 234
>gi|315426587|dbj|BAJ48216.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485345|dbj|BAJ50999.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
Query: 9 SALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLV 68
+ +V + + +ASDRR + Q+I K+ D L I ++GL +D+ L +
Sbjct: 2 TTIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVR 61
Query: 69 FRHKLYQLREERDMKPETFASLVSALLYE--KRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
KL LR + + L+S L Y + + PY+ + ++AG+ DE P + + D
Sbjct: 62 AERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEG-PHVFSSDMS 120
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G+ +A++FV +G+ YG E+++ P ++ +E +A+ +++ RD SG G
Sbjct: 121 GSM-VAEEFVSSGSGSPVAYGVLESLYTPGLKLEEARAIAVKAVEAAMQRDPGSGNG 176
>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
distachyon]
Length = 219
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 14/213 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL V ++ +I+ + D+ + SG D + L
Sbjct: 8 ENNGGTCVAVAGADYCVVAADTRLSVGYSILSRAHSKIAHLADKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 68 KNLTAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYD 127
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---PDMEP----------DELFETVSQALL 171
++G+ E + GT + + K P + P E + V
Sbjct: 128 AVGSYERT-GYSAQGTGATLMMPVLDNQLKSPSPLLLPARDAVTPLSESEAVDLVKDVFA 186
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G + ++ + ++ R D
Sbjct: 187 SATERDIYTGDSVEIVVINSSGTHRECIELRKD 219
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
Length = 195
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
K+ +A++RRL ++ +++ K+ R I +G+ D QTL + + K Y++
Sbjct: 14 KDGVVLAAERRLSYGDFVLSKSARKVFKLG-RFGIAGAGIVGDIQTLTRIMNVEIKYYEM 72
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKD-F 135
R + A L+S +LY+ + PY + + G+ DED P + +D IG+ L +D +
Sbjct: 73 YNSRKISARAAAKLLSVILYQNKVLPYISELLFGGV-DEDGPKLFILDPIGS--LIEDSY 129
Query: 136 VVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIK 195
G+ G EA + + + E +++ S+V+RD +SG G + I+ I
Sbjct: 130 AAVGSGARVAIGVLEAEYNESLTSEAAKELAIKSMKSAVERDVMSGDGIDILIINKNNIY 189
Query: 196 ERILK 200
E +K
Sbjct: 190 EDFIK 194
>gi|344235158|gb|EGV91261.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 52
Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
+AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 52
>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
Length = 243
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 20/216 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + + ++ D + I +G A D L +R
Sbjct: 30 NGGTILGIAGEDFAVLAGDTRHTTGYSINSREEPKVFDCGDNILISANGFAADGDALVKR 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
K Y+ + M ++ A + LLY KR PY+ +IAGL +E K + + D +
Sbjct: 90 FKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSYDPV 149
Query: 127 GAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVSQ 168
G+ E ++ AG A SL + + FK EP DE+ V
Sbjct: 150 GSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPDSNGTKKRALRFLSVDEVVRLVRD 207
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT ++E + D
Sbjct: 208 AFTSATERHIHVGDGLQIMIVTKDGVREEFYSLKKD 243
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A ++R+ ++ +++ I + +G +GL D LY+ L K Y+L R+
Sbjct: 23 LAGEKRMTYDGFILSKSVRKLFPITEHTAVGFAGLTGDMNFLYRVLKTEAKNYELEHGRE 82
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
+K + A L+S +LY + P + V+ G ++ P + +D++G+ L + + G+
Sbjct: 83 IKTRSLAKLLSIILYSYKLFPMLTEAVVGGF--DEAPSLFVLDAVGSL-LEERYTALGSG 139
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIK 195
+ E ++ DM +E +A+L++++RD LSG G V ++T IK
Sbjct: 140 SQLALSIIEQSYREDMPLEEAKNLAVKAVLAAIERDVLSGDGVDVLVITREGIK 193
>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 220
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 9/183 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A KN IA+D RL ++ ++ K+ D+ +G SG+ D L
Sbjct: 16 NGGTVIAATWKNYAVIAADTRLSLRYLIHTRYSTKLLKLTDKCILGTSGMQADMLALQSV 75
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + ++Y+ ++ A L+S +LY +RF PY+ ++ GL + C D++
Sbjct: 76 IERQIEMYRFTHHKEPTFGAIAQLLSTVLYGRRFFPYYTFNILCGLDENGNGVTCNYDAV 135
Query: 127 GAKELAKDFVVAGTAG-------ESLYGACEAMFKPDMEP-DELFETVSQALLSSVDRDC 178
G K + GT+ ++L KP + ++L V A++S+V+RD
Sbjct: 136 GNYNYEK-YAAQGTSSSLVVPILDNLLNGNNQQVKPQINSLEDLVNLVKNAMVSAVERDI 194
Query: 179 LSG 181
+G
Sbjct: 195 CTG 197
>gi|452821727|gb|EME28754.1| 20S proteasome subunit beta 6 [Galdieria sulphuraria]
Length = 232
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG +VA+ G++ +++ RLG+ + R S +++R+ + +G+ D+ TL+
Sbjct: 23 QNNGGTVVAIGGEDYCIVSATTRLGLGFAIPTRNVCRYSILNNRVVLATAGMFADTATLH 82
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ + R K+Y+ ++++ + A L+S LY +RF PY+ V+ GL ++ + F+ D
Sbjct: 83 KVIKARVKIYEEQQDKPFGLHSAAQLLSNTLYYRRFFPYYTFNVLGGLDEDGQGFVYGFD 142
Query: 125 SIGAKELAKDFVVAGTAGESL 145
+IG+ E K VV G++L
Sbjct: 143 AIGSGEKVK--VVCNGTGQAL 161
>gi|440494438|gb|ELQ76818.1| 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3
[Trachipleistophora hominis]
Length = 201
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 92/178 (51%), Gaps = 5/178 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E G+ +VAM + +A+D R + + +++K+ +++ SG ++ +Q +
Sbjct: 5 EMTGTTIVAMKFEGGVIMAADSRTSMGNYVVNRVSNKLTKLAPKIYCCRSGRSSHTQAVA 64
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVI-AGLSDEDKPFICTM 123
+ + R L ER+ A+L+ A++Y + P +I AG +EDK + ++
Sbjct: 65 EYVASRTNLIAYTNEREPLVRDAANLIRAVVY---YNPMLTASIIVAGYDEEDKGSVYSI 121
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+ +G L +++ + G+ LYG C++M++ DM +E FE + + ++ RD +SG
Sbjct: 122 N-LGGSLLKREWAMGGSGSAFLYGYCDSMYRSDMSFEEKFELTKKLVQLAIKRDNMSG 178
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 1/186 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +A+++R + + ++I +I D + +G D+Q + + +
Sbjct: 9 GTTTVGIVCSDGVVMATEQRATMGHLIASKTAKKIYQIDDFAAMTTAGSVGDAQQIVRII 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R + M + +++S LL +R+ P Q ++ G D+ P + ++D++G
Sbjct: 69 SVESKLYKMRRKESMTIKGLTTMLSNLLSGQRYYPLMVQLLVGGY-DKHGPELYSIDALG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
K V G+ YG E +K +M E E +AL +++ RD SG G V
Sbjct: 128 GNIDEKRVVATGSGSPIAYGVLEDRYKENMTTQEGVELAVRALHNAMKRDSASGDGIDVV 187
Query: 188 IVTPTE 193
I+T +
Sbjct: 188 IITKDQ 193
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 1 MSITE-YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATD 59
+ +TE + G+ V +V + +A+DRR + A + +I KI + L I +G D
Sbjct: 2 LQLTEKFKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGD 61
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
L + L KLY + + M + A+L++ +L R PY ++ G ++KP
Sbjct: 62 ILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGF--DEKPR 119
Query: 120 ICTMDSIGAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
+ ++D +G + +D +V AG+ E Y ++ ++ D++ E + +A+ S++ RD
Sbjct: 120 LYSVDMMGG--ITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDV 177
Query: 179 LSGWGGHVYIVTPTE 193
SG G + +VT TE
Sbjct: 178 FSGDG--IMVVTITE 190
>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
Length = 356
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++ L
Sbjct: 103 NGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKP--KVFRLNDKATLATNGFAADAEALV 160
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ R M + A ++S +LY KRF PY+ ++ GL +E K + + D
Sbjct: 161 SHVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAVYSFD 220
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFK-----PD--------MEPDELFETVSQ 168
+G+ E ++F A A +SL + + MF+ P+ M E+ + V
Sbjct: 221 PVGSYE--REFCRAAGAAQSLIQPFFDNQIMFRNQTSTPERTVPTPGQMTLGEVLKIVVD 278
Query: 169 ALLSSVDRDCLSGWGGHVYIV-TP 191
+ S+ +R G G V++V TP
Sbjct: 279 SFTSATERHIEVGDGLEVFVVRTP 302
>gi|401402253|ref|XP_003881203.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
Length = 246
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG +V + G++ D RL +I + FQ +I+K+ D++ + SG+ D TL+
Sbjct: 42 NGGTVVCVAGEDFAVAVGDTRLSTGF-SIYSRFQSKITKLTDKVVLATSGMQADKTTLHN 100
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D+
Sbjct: 101 LLQIRIEQYTHQHRHPPSLNAIAQLLSTMLYSRRFFPFYTFNVLCGIDENGKGAVYGYDA 160
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDELFETVSQALLSSVDRD 177
IG+ E A+ + AGT + + K + +++ + + A+ S+ +RD
Sbjct: 161 IGSFEAAR-YNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTREQVVDIIKSAVASAGERD 219
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G V +++ + I++ ++ R D
Sbjct: 220 IFTGDQAEVVMISQSGIEKTLMDLRAD 246
>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 210
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 8 GSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ V + K+ A++RR +G + ATD +I KI + + ++G D+Q+L +
Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATD--KIFKIDEHIAATIAGSVADAQSLMK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L LY++R + E A+L + +L+ RF P+ Q ++ G+ DE+ I ++D
Sbjct: 67 YLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGV-DENGAKIYSLDP 125
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + FV G+ YG E + ++ DE + +A+ S+++RD SG G
Sbjct: 126 SGGM-IPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGIL 184
Query: 186 VYIVTPTE 193
V VT E
Sbjct: 185 VATVTEEE 192
>gi|444720794|gb|ELW61563.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 86
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
V+GT E +YG CE++++ +M+P+ LFET+SQA+L++VDRD + G G V++ +I
Sbjct: 19 VSGTCSEQMYGMCESLWEANMDPEHLFETISQAMLNAVDRDAVPGIGVIVHVTEKDKITT 78
Query: 197 RILKGRMD 204
R K RMD
Sbjct: 79 RTPKARMD 86
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ AS+RR + ++I KI+D + ++G D+Q L + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LYQ+R + + AS+ + +L R GP + Q ++ G+ D DKP + ++D G
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGM-DGDKPSLYSLDPAG 123
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ ++ G+ YG E + ++ DE E +A+ ++ +RD SG G V
Sbjct: 124 GM-IEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLVA 182
Query: 188 IVT 190
VT
Sbjct: 183 KVT 185
>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
Length = 240
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ +A+D RL + +ISK+ D+ IG SG+ +D +TL+
Sbjct: 36 NGGTVIGLTGKDYVILAADTRLSLSYSIYTRFCPKISKLTDKCIIGSSGMQSDIKTLHSL 95
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L+ L A L+ +LY +RF PY+ ++AG+ + +K + DS+
Sbjct: 96 LQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYAFNILAGVDENNKGVLYNYDSV 155
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDM-----EPDELFET-----------VSQAL 170
G+ A S G+ + P + + ++L + V A+
Sbjct: 156 GS---------YCEATHSCVGSGSQLILPILDNRVEQKNQLIKNTNFNLGDDINFVKDAI 206
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
S+ +RD +G +Y++ I L + D
Sbjct: 207 TSATERDIYTGDKTLIYVIDKMGINVNTLDLKQD 240
>gi|59275970|dbj|BAD89556.1| proteasome subunit [Oncorhynchus mykiss]
Length = 212
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 11 GTTILAVTFNGGVIIGSDSRASIGGNYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 70
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTMD 124
F+ + ++ E + AS++ L Y + F + AG + P + T+
Sbjct: 71 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF---ITAGWDRKKGPQVYTV- 126
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
++G L++ F + G+ +YG +A +KPDM +E + + AL ++ RD +SG
Sbjct: 127 ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGGVA 186
Query: 185 HVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 187 HLVVITEEGVEHVVIPG 203
>gi|209737734|gb|ACI69736.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 212
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 10 TGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTK 69
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F+ + ++ E + AS++ L Y + F + AG + P + T+
Sbjct: 70 AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF---ITAGWDRKKGPQVYTV 126
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
++G L++ F + G+ +YG +A +KPDM +E + + AL ++ RD +SG
Sbjct: 127 -ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGV 185
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 186 AHLVVITEEGVEHVVIPG 203
>gi|190359943|sp|A7KII6.1|PB6LB_SALSA RecName: Full=Proteasome subunit beta type-6-B like protein;
AltName: Full=Low molecular mass protein 2-delta-B;
Flags: Precursor
gi|148362125|gb|ABQ59652.1| PSMB9b-like protein [Salmo salar]
gi|262189356|gb|ACY30374.1| PSMB9b-like protein [Salmo salar]
Length = 217
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 15 TGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F+ + ++ E + AS++ L Y + F + AG + P + T+
Sbjct: 75 AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF---ITAGWDRKKGPQVYTV 131
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
++G L++ F + G+ +YG +A +KPDM +E + + AL ++ RD +SG
Sbjct: 132 -ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGV 190
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 191 AHLVVITEEGVEHVVIPG 208
>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
Length = 149
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ NG + VA+ G + I S R+ + + D+ +I K+ D+ + SG D +
Sbjct: 9 SLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQADVR 68
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + L R +YQ + + M A L+S LY KRF PY+ V+ GL +E K +
Sbjct: 69 ALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGWRW 128
Query: 122 TMDSI 126
D +
Sbjct: 129 RFDIV 133
>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
Length = 235
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S +NG ++A+ G++ +A D RL ++ D + K+ D +G G D
Sbjct: 25 SPYSWNGGTVLAIAGEDYAVLACDARLSEYFSILSRDSPKRYKLTDMTVLGCCGFHGDVL 84
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TL + L R K Y+ + M ++ A+++S +LY +RF PY+ ++AGL +E K +
Sbjct: 85 TLTKMLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTYNILAGLDEEGKGCVY 144
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDME----------------PDE-LFE 164
+ D IG+ E ++ AG G+ A+ +P ++ P E
Sbjct: 145 SFDPIGSYE--REVYRAG-------GSASALLQPLLDNQIGMKNMQGVQRLPVPKEKAVA 195
Query: 165 TVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
V +S+ +RD +G + ++T I+E R D
Sbjct: 196 LVKDVFISAAERDIYTGDQIIINVITKDGIQEESFPLRRD 235
>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 152
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGK 122
>gi|343426757|emb|CBQ70285.1| probable PRE7-20S proteasome subunit(beta6) [Sporisorium reilianum
SRZ2]
Length = 291
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++ L
Sbjct: 38 NGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKP--KVFRLNDKATLATNGFAADAEALV 95
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ R M + A ++S +LY KRF PY+ ++ GL +E K + + D
Sbjct: 96 SHVQQRLEMYRHAHGRSMPLHSIARMLSTILYGKRFFPYYVYNILGGLDEEGKGAVYSFD 155
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFK-----PD--------MEPDELFETVSQ 168
+G+ E ++F A A +SL + + MF+ P+ M E+ + V
Sbjct: 156 PVGSYE--REFCRAAGAAQSLIQPFFDNQIMFRNQVSTPERTVPTPGQMTLPEVLKIVVD 213
Query: 169 ALLSSVDRDCLSGWGGHVYIV-TPTE 193
+ S+ +R G G V++V TP +
Sbjct: 214 SFTSATERHIEVGDGLEVFVVRTPAK 239
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI E V + + +A+++R+ + +++ K++D + I G+ D Q
Sbjct: 3 SIEELITGTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGIASIGILADMQ 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + LY L + + A L+S +L+ R PYF + ++ G+ DE P +
Sbjct: 63 VLTKIAKAYMSLYALDTKTRPSIRSAAKLLSYVLFANRVLPYFVEVLVGGVDDEG-PHLF 121
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
MDS+G+ + D+ GT + E+ +KP M E E +A+ S+ RD +SG
Sbjct: 122 IMDSLGSL-IEDDYAAVGTGTKLAIAILESNYKPSMTVKEARELAIKAINQSISRDPVSG 180
Query: 182 WGGHVYIVT 190
G + +T
Sbjct: 181 DGIDILTIT 189
>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ NG + VA+ G + I S R+ + + D+ +I K+ D+ + SG D +
Sbjct: 97 SLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQADVR 156
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
L + L R +YQ + + M A L+S LY KRF PY+ V+ GL +E K ++
Sbjct: 157 ALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGWV 215
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +AS++R+ ++ + ++ +I + +GL D Q L ++
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P + A ++S ++YE+RF P Q ++ G+ E P I T+DS+G
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGVVGE--PAIYTLDSLG 120
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ L ++ GT E G + FK M + + + + S+ RD SG G
Sbjct: 121 S-VLPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSGDG 175
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +AS++R + + +++ +I D + + +G D+Q L + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY++R M + A+L+S L R+ P Q +I G+ D++ P I ++D++G
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGV-DKNGPAIYSLDAMG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
G+ YG E +K D+ E + +A+ +++ RD SG V
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRAIHNAMKRDSASGENIDVV 187
Query: 188 IVT--------PTEIKER 197
++T P E+K R
Sbjct: 188 VITKEAFKRLDPEEVKSR 205
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V ++ +A+++R + + ++I +I D + + +G D+Q + + +
Sbjct: 9 GTTTVGIVCRDGVVLATEKRATMGNLIASKTAKKIYQIDDLVGLTTAGSVGDAQQIVRLI 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY++R + M + +L+S LL +R+ P Q +I G+ D+ P + ++D++G
Sbjct: 69 SVESRLYKMRRQETMTIKGITTLLSNLLSGQRYYPLMVQLLIGGV-DKKGPNLYSLDALG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ V G+ YG E + DM +E + +AL +++ RD SG G V
Sbjct: 128 GMIEETNAVATGSGSPIAYGVLEDRYHTDMSIEEGADLAIRALHNAMKRDSASGNGIDVV 187
Query: 188 IVT 190
+T
Sbjct: 188 CIT 190
>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
magnipapillata]
Length = 226
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G +L+A+ G++ IASD RL + + + ++ D +G G D TL +
Sbjct: 21 QGGSLLAIAGEDFAVIASDTRLSEGFLIHSRNIPKTYQLTDTTILGSCGFHGDVLTLTKN 80
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R +Y+ + M + A ++S LY KRF PY+ +IAGL + K I + D +
Sbjct: 81 IKTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYTYNIIAGLDSDGKGAIYSFDPV 140
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQA 169
G+ E ++ AG G+C AM + ++ + E +
Sbjct: 141 GSYE--RETYRAG-------GSCSAMLQSFLDNQIGQKNLAKKSDIPLSLERCVELIKDV 191
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G G + I+T K + R D
Sbjct: 192 FISAAERDIETGDGVLISIITKEGTKSEVFPLRRD 226
>gi|385805286|ref|YP_005841684.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
gi|383795149|gb|AFH42232.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
Length = 199
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 95/181 (52%), Gaps = 6/181 (3%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ + G+ +V + N IA + R+ + +++ +++ I++RL G +GL D+Q
Sbjct: 2 VETFQGATVVGLKFSNGAVIAGEERMTYRTFIMSSQAKKVYLINERLGAGTAGLMGDTQN 61
Query: 63 LYQRLVFRHKL--YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+ + +FR ++ Y+ + M ++ A L+S +LY R P + + ++AG+ D+ KP +
Sbjct: 62 IIR--IFREEIRYYETEIKSKMSTKSAAKLLSNILYSYRGFPLYGEFILAGI-DDKKPTL 118
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
+D G+ L +++ GT G G E +++ +++ + +A+ V RD +S
Sbjct: 119 VVLDPAGSV-LEDEYMAIGTGGPVAIGVLEELYQQNIDEKTAIDLAIRAVKQGVRRDAMS 177
Query: 181 G 181
G
Sbjct: 178 G 178
>gi|448738912|ref|ZP_21720932.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
gi|445800726|gb|EMA51074.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
Length = 228
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
+ +A+DRR + Q+I++IH R + +SG + +Q L L LY+ R
Sbjct: 44 DGVVLATDRRASAGNMVASKRAQKIAEIHPRGALTISGAVSAAQALISNLRAEADLYEAR 103
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVV 137
+M + ++L S L F Y QP++ G+ DE I ++D G+ + +++
Sbjct: 104 RGEEMSMQALSTLTSNFLRSGAF--YIVQPILGGVDDE-GAHIYSIDPAGSV-MEEEYDA 159
Query: 138 AGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G+ YG E ++ + DE ++A+ S+V+RD SG G
Sbjct: 160 TGSGSPFAYGVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNG 205
>gi|190359942|sp|A7KE01.1|PB6LA_SALSA RecName: Full=Proteasome subunit beta type-6-A like protein;
AltName: Full=Low molecular mass protein 2-delta-A;
Flags: Precursor
gi|146147390|gb|ABQ01993.1| PSMB9a-like [Salmo salar]
gi|148362164|gb|ABQ59686.1| PSMB9a-like protein [Salmo salar]
gi|209737398|gb|ACI69568.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 15 TGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F+ + ++ E + AS++ L Y + F + AG + P + T+
Sbjct: 75 AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF---ITAGWDRKKGPQVYTV 131
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
++G L++ F + G+ +YG +A +KPDM +E + AL ++ RD +SG
Sbjct: 132 -ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGV 190
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 191 AHLVVITEEGVEHVVIPG 208
>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL--- 63
NG ++ + GK+ +A D RL + + +ISKI D+ IG SG+ +D +TL
Sbjct: 38 NGGTVIGLTGKDYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 64 ----YQRLVFRHK---LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
Y + + +HK L+ L A L+ LY +RF PY+ ++AG+ +
Sbjct: 98 LQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTLYSRRFFPYYTFNILAGIDENG 157
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLY---------GACEAMFKPDMEPDELFETVS 167
K + + D+IG+ + +G SL + + D + V
Sbjct: 158 KGVLYSYDAIGSYYQSTHACTG--SGSSLILPILDNRVEQKNQLIKNMDFNLGDDINFVK 215
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A+ S+ +RD +G +YI+ I +L + D
Sbjct: 216 DAMTSATERDIYTGDQAEIYIIDNLGINTTLLDLKKD 252
>gi|185133585|ref|NP_001117731.1| low molecular mass protein 2 [Oncorhynchus mykiss]
gi|5823092|gb|AAD53037.1|AF115540_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKA 75
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTMD 124
F+ + ++ E + AS++ L Y + F + AG + P + T+
Sbjct: 76 AKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF---ITAGWDRKKGPQVYTV- 131
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
++G L++ F + G+ +YG +A +KPDM +E + + AL ++ RD +SG
Sbjct: 132 ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVA 191
Query: 185 HVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 192 HLVVITEEGVEHIVIPG 208
>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Rhipicephalus pulchellus]
Length = 232
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IASD RL + ++ K+ ++ +G +G D T +
Sbjct: 27 NGGSIVAVAGDDFAVIASDSRLSSGYHIHTREQSKLFKLSNQCVLGSTGCWCDILTFTRF 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y + M A L+ +LY KRF PY+ ++AGL +E K I D +
Sbjct: 87 LEARMKMYLHEHHKLMSTPAVAQLIVTMLYNKRFFPYYISNILAGLDEEGKGCIYCYDPV 146
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDE-LFETVSQALLSSVDRD 177
G E + + G++ L + KP+ E + +S+ +RD
Sbjct: 147 GHSERVQ-YRAGGSSSALLQPLLDNQIGFKNMENVKPEPPTRERAVNIIKDVFISAAERD 205
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G ++I+ IKE + R D
Sbjct: 206 IYTGDSVIIHIIDKDGIKEDKMPLRRD 232
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ V + K+ AS+RR + ++I KI + + ++G D+QTL +
Sbjct: 7 FEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKIDNHIAATIAGSVADAQTLMK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY+LR +D+ E A++ S +L+ P + Q +I G+ D+ I ++D+
Sbjct: 67 VISAETSLYRLRNGKDISLEAAAAVSSNILHSS---PAYVQTLIGGV-DDTGASIYSLDA 122
Query: 126 IGAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
G + KD F+ G+ YG E F D+ +E E +A+ ++ +RD SG G
Sbjct: 123 AGG--MIKDTFISTGSGSTFAYGVLEDRFYEDITVEEATEVAIRAIKAATERDTFSGNGF 180
Query: 185 HVYIVTP 191
V VT
Sbjct: 181 LVANVTK 187
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ + G+ V +V +AS+ R + + ++I +I D + + +G+ D+Q
Sbjct: 2 VEAFKGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQA 61
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + + +LY+++ + + SL+S +L +R+ P+ Q V+ G+ D+ P I +
Sbjct: 62 LVRMIQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGV-DKMGPKIFS 120
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
+D++G + D V G+ YG E+++KP + + +A+ +++ RD SG
Sbjct: 121 LDALGGQIEEHDIVSTGSGSPIAYGVLESLYKPGLSIQDGSVLCVRAVHTAMKRDSASGN 180
Query: 183 G 183
G
Sbjct: 181 G 181
>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
Length = 359
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 7 NGSALVAMVGKNCFAIA-SDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG +V + G++ FA+A D RL + +I+K+ D++ + SG+ D TL+
Sbjct: 155 NGGTVVCVAGED-FAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHN 213
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D+
Sbjct: 214 LLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDA 273
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDELFETVSQALLSSVDRD 177
IG+ E ++ + AGT + + K + + + E V A+ S+ +RD
Sbjct: 274 IGSFEPSR-YNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTRERIVEIVKSAVASAGERD 332
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G V +++ + I++ ++ R D
Sbjct: 333 IFTGDQAEVVMISQSGIEKTLMDLRAD 359
>gi|59275961|dbj|BAD89548.1| proteasome subunit [Oncorhynchus mykiss]
gi|306494798|gb|ADM95870.1| PSMB9L [Oncorhynchus mykiss]
Length = 217
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 15 TGTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F+ + ++ E + AS++ L Y + F + AG + P + T+
Sbjct: 75 AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF---ITAGWDRKKGPQVYTV 131
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
++G L++ F + G+ +YG +A +KPDM +E + + AL ++ RD +SG
Sbjct: 132 -ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGV 190
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 191 AHLVVITEEGVEHIVIPG 208
>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 359
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +V + G++ D RL + +I+K+ D++ + SG+ D TL+
Sbjct: 155 NGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHNL 214
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D+I
Sbjct: 215 LKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDAI 274
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDELFETVSQALLSSVDRDC 178
G+ E ++ + AGT + + K + + + E V A+ S+ +RD
Sbjct: 275 GSFEPSR-YNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTRERIVEIVKSAVASAGERDI 333
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
+G V +++ + I++ ++ R D
Sbjct: 334 FTGDQAEVVMISQSGIEKTLMDLRAD 359
>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 361
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +V + G++ D RL + +I+K+ D++ + SG+ D TL+
Sbjct: 157 NGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHNL 216
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D+I
Sbjct: 217 LKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDAI 276
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDELFETVSQALLSSVDRDC 178
G+ E ++ + AGT + + K + + + E V A+ S+ +RD
Sbjct: 277 GSFEPSR-YNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTRERIVEIVKSAVASAGERDI 335
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
+G V +++ + I++ ++ R D
Sbjct: 336 FTGDQAEVVMISQSGIEKTLMDLRAD 361
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 12/209 (5%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+ T G+ V + K+ +A++RR+ ++ + + +++ +I + ++GL D+
Sbjct: 1 MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + + +LY+L+ +M E A+L+S +L + ++ PY Q ++ G+ + P +
Sbjct: 61 QVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTAPHV 118
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
++D+ G + + G+ +YG E+ + M DE + V +A+ ++ RD S
Sbjct: 119 FSIDAAGG-SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSAS 177
Query: 181 GWGGHVYIVT--------PT-EIKERILK 200
G V ++T PT +I+ RI K
Sbjct: 178 GGMIDVAVITRKDGYVQLPTDQIESRIRK 206
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 12/209 (5%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+ T G+ V + K+ +A++RR+ ++ + + +++ +I + ++GL D+
Sbjct: 1 MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + + +LY+L+ +M E A+L+S +L + ++ PY Q ++ G+ + P +
Sbjct: 61 QVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTAPHV 118
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
++D+ G + + G+ +YG E+ + M DE + V +A+ ++ RD S
Sbjct: 119 FSIDAAGG-SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSAS 177
Query: 181 GWGGHVYIVT--------PT-EIKERILK 200
G V ++T PT +I+ RI K
Sbjct: 178 GGMIDVAVITRKDGYVQLPTDQIESRIRK 206
>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
Length = 235
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 12/211 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL ++ + ++ + +G D+ +L
Sbjct: 26 ESNGGSIVAIAGEDFVVIAADTRLSSGYNIHTRKQSKLFPLSNQTVLASTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ + M + A ++S ++Y +RF PY+ ++AG+ + K + + D
Sbjct: 86 GLMKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYVSNILAGIDKDGKGVVFSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSS 173
IG E A + GTAG L + P++ + S +S+
Sbjct: 146 PIGHCERAT-YRAGGTAGALLQPVLDNQIGYKNMNLHGEDAPEVTKERAVAVASDTFISA 204
Query: 174 VDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G + I+T I+ + L+ R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIETQELQLRQD 235
>gi|408405837|ref|YP_006863820.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408366433|gb|AFU60163.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 192
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 9 SALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLV 68
+ +V + K + SD+R + Q+I+KI D L + ++G +D++ L +
Sbjct: 2 TTIVGIKTKEGVVLGSDKRASKGFFIGSKITQKIAKIDDTLAVAIAGQLSDAEYLIKVAK 61
Query: 69 FRHKLYQLREERDMKPETFASLVSALLYE--KRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+L +LR + + A L+S L Y K + PYF + ++AG+ D++ I D
Sbjct: 62 AERRLIELRRGFPLTVKESARLISNLAYSGMKNYQPYFVELLVAGV-DQEGGHIYAADMS 120
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
GA ++DF +G+ YG E+M+ ++ +E + ++A+ ++++RD SG G V
Sbjct: 121 GAI-TSEDFASSGSGSPIAYGVLESMYHKEITNEEAKQVATKAVSAAMERDPGSGNGIDV 179
Query: 187 YIVTPTEIKE 196
++ ++E
Sbjct: 180 LVIPNLVVQE 189
>gi|149549948|ref|XP_001513174.1| PREDICTED: proteasome subunit beta type-1-like, partial
[Ornithorhynchus anatinus]
Length = 261
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
++A+ G++ +ASD RL + D + K+ DR IG SG D TL + + R
Sbjct: 2 VLAIAGEDFSIVASDTRLSEGYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEAR 61
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 130
K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + +++ IG+
Sbjct: 62 LKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSLNPIGS-Y 120
Query: 131 LAKDFVVAGTAGESL 145
L ++ GT L
Sbjct: 121 LKDNYKAGGTTNTML 135
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + A+ GK+ IA+D RL + ++ + R+ + +G +G TD TL +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + K Y+ ++ A+L+S LY +RF P + V+ GL + + I + D+I
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP--------DMEPDELFETVSQALLSSVDRDC 178
G+ EL K + V G+A + ++ D++ +E + + + +R+
Sbjct: 122 GSFELMK-YAVQGSAQSHIIPILDSCVAKKNRNEPYVDLDREEALNLMKEVFTAGTEREK 180
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
+G + VT I+ +++ R D
Sbjct: 181 DTGDQLEILTVTAHGIEREVMELRKD 206
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 40 QRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
Q++ KI + ++GL D+Q L + + +LY+++ + +M E A+L+S +L + +
Sbjct: 39 QKLYKIDTYAGMTIAGLVGDAQVLVRYMRAEMELYRVQRKINMPIEAAATLLSNMLNQSK 98
Query: 100 FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP 159
+ PY Q ++ G + KP I ++D+ G + ++ G+ +YG EA ++P+M+
Sbjct: 99 YYPYMVQLLVGGF--DKKPHIFSIDAAGG-SVEDEYASTGSGSPFVYGVLEAEYQPNMKL 155
Query: 160 DELFETVSQALLSSVDRDCLSGWGGHVYIVTP 191
D+ +A+ + RD SG + ++ P
Sbjct: 156 DDAINLAIKAISVAKQRDSASGNMLQIGVIDP 187
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + A+ GK+ IA+D RL + ++ + R+ + +G +G TD TL +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + K Y+ ++ A+L+S LY +RF P + V+ GL + + I + D+I
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKP--------DMEPDELFETVSQALLSSVDRDC 178
G+ EL K + V G+A + ++ D++ +E + + + +R+
Sbjct: 122 GSFELMK-YAVQGSAQSHIIPILDSCVAKKNRNEPYVDLDREEALNLMKEVFTAGTEREK 180
Query: 179 LSGWGGHVYIVTPTEIKERILKGRMD 204
+G + VT I+ +++ R D
Sbjct: 181 DTGDQLEILTVTAHGIEREVMELRKD 206
>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
DSM 11827]
Length = 250
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G++ IA D R G +QT ++ ++ D+ + ++G A D
Sbjct: 14 NGGTILAIAGQDFTVIAGDTRQSEGYNIQTRYAP--KVFRLTDKAVLAVNGFAADGNMFV 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q++ R + YQ ++M A L+ +LY KRF PY+ ++ G+ D+ + + D
Sbjct: 72 QKVQQRLEWYQHAHNKEMPLRAIARLIQTMLYAKRFFPYYVYNILGGIEDDGSGAVYSFD 131
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEPD-----------ELFETVSQAL 170
+G+ E ++ A A +SL + + FK + P E+ V +
Sbjct: 132 PVGSYE--REACRAAGAAQSLVQPFLDNQIYFKNQLPPSGGAHPKHLPLKEVLSLVIDSF 189
Query: 171 LSSVDRDCLSGWGGHVYIVTPTE 193
+ +R G G +YIVT ++
Sbjct: 190 TGATERHIEVGDGLEIYIVTASK 212
>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
Length = 230
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G + IA+D RL + ++ + +++++ + I SG D TL +
Sbjct: 25 NGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCNADMVTLQKY 84
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L F+ ++Y + ++M A +++ LY +RF PY+ ++ GL + + + D+I
Sbjct: 85 LKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLDQNGEGCVFSYDAI 144
Query: 127 GAKELAKDFVVAGTAG-------ESLYGACEAMFKPDMEP--DELFETVSQALLSSVDRD 177
G E K + V+G+ ++L KP +E DE E V S+ +RD
Sbjct: 145 GCFERLK-YTVSGSGHALIEPFLDNLVAYKNTDNKPTIERSCDETLELVKDIFSSAGERD 203
Query: 178 CLSGWGGHVYIV 189
+G +YI+
Sbjct: 204 IYTGDFVDIYII 215
>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
Length = 242
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + ++ D + + +G + D L R
Sbjct: 29 NGGTILGIAGEDFSVLAGDTRHTVGYSINSRYEPKVFDAGDNIVVSANGFSADGNALVSR 88
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
K Y + + + A + +LY KRF PY+ +IAGL DE K + + D +
Sbjct: 89 FKNHLKWYHFNNNKKISLSSAARFIQHMLYGKRFFPYYVHTIIAGLDDEGKGAVYSFDPV 148
Query: 127 GAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVSQ 168
G+ E ++ AG A SL + + FK EP +E+ + V
Sbjct: 149 GSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPGTDGKVKKELKYLSLEEVIQLVRD 206
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIK 195
A S+ +R G G + IVT ++
Sbjct: 207 AFSSATERHIHVGDGLEILIVTKDGVR 233
>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 201
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
+AM G + IASD RL D + ++ D +G +G D TL + L R
Sbjct: 1 MAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYQLTDGTVLGCAGFHGDVLTLTKVLTARL 60
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKEL 131
K+ + + M A+++S +LY +RF PY+ ++AGL +E K + + D +G+ E
Sbjct: 61 KMXEHEHHKKMFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPVGSYE- 119
Query: 132 AKDFVVAGTAGESLYGAC---------EAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
+ + AG++ L E K + D+ V +S+ +RD +G
Sbjct: 120 RETYRAAGSSSALLQPLLDNQIGGKNQEGWVKEPIPVDKAVALVKDVFISAAERDIYTGD 179
Query: 183 GGHVYIVTPTEIKERILKGRMD 204
G ++++T KE R D
Sbjct: 180 GIVLHVLTKDGCKEERFPLRRD 201
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG +A+ G + +A+D R+ ++ D ++ ++ + I +G TD TL+
Sbjct: 45 DFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLW 104
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +Y E++M A +++ LY +RF PY+ V+ GL ++ K + + D
Sbjct: 105 KELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYD 164
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMF--------KPDMEPDELFETVSQALLSSVDR 176
+IG+ E + +G+ + + + KP E E V + L+++ +R
Sbjct: 165 AIGSFERVP-YSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGER 223
Query: 177 DCLSGWGGHVYIVT 190
D +G + I++
Sbjct: 224 DIYTGDAVEITIIS 237
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V K+ +A+D R + ++ +I +I D L + +G D +L +
Sbjct: 5 KGTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVRL 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ R R+M + A+L S +L +R+ PYF ++AG ++KP + ++D
Sbjct: 65 LRAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGWFLVAGY--DEKPGLYSIDMA 122
Query: 127 GAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + +D +V AG+ E Y + + M + + +A+ +++ RD +G G
Sbjct: 123 GG--ITEDKYVSAGSGMEFAYSVLDNEYDEKMNVKKGVKLAIKAINTAIKRDVFTGDGIM 180
Query: 186 VYIVTP 191
V ++T
Sbjct: 181 VVVITK 186
>gi|440796014|gb|ELR17123.1| proteasome subunit protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 236
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ GK+ +A+D RL + + +++ K+ D+ I +G+ D L++
Sbjct: 30 NGGTTLALHGKDFCVVAADTRLSTGYSIHSREARKVLKLTDKCVIATAGMQADQLALHKL 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R + Y+ + + M A +++ +LY KRF P++ V+ G+ D + + D++
Sbjct: 90 LQTRLQWYEHQHRKPMSTPAIAQMLATILYSKRFFPFYTFNVLGGVDDNGVGCVYSYDAV 149
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMF----------KPDMEPDELFETVSQALLSSVDR 176
G+ E K + +GT + + + KP++ +E + V S+ +R
Sbjct: 150 GSFERVK-YSSSGTGNQLVQPLLDNQIGWKDQRATKTKPELNVEETVDFVRDIFTSAGER 208
Query: 177 DCLSG 181
D +G
Sbjct: 209 DIYTG 213
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +AS++R + + +++ +I D + + +G D+Q L + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRLV 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY++R M + A+L+S L R+ P Q +I G+ D++ P I ++D++G
Sbjct: 69 NVESQLYKMRRNESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGV-DKNGPGIYSLDALG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
G+ YG E ++ DM E + +A+ ++ RD SG V
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGLDLAIRAIHNATKRDSASGENIDVV 187
Query: 188 IVT--------PTEIK 195
++T P E+K
Sbjct: 188 VITKEAFRRLDPEEVK 203
>gi|392332285|ref|XP_001053961.3| PREDICTED: uncharacterized protein LOC363748 [Rattus norvegicus]
gi|392351945|ref|XP_344007.5| PREDICTED: uncharacterized protein LOC363748 [Rattus norvegicus]
Length = 275
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRD-CLS 180
++D IG + DFVV+GT E +YG CE+ M+P+ L ET+SQA+L++VD D C+
Sbjct: 199 SLDLIGCPMMTDDFVVSGTCSEQMYGMCES----SMDPERLCETISQAMLNAVDHDACM- 253
Query: 181 GWGGHVYIVTPTEIKERILKGRMD 204
G V+I+ +I R LK RMD
Sbjct: 254 --GVIVHIIKKDKITTRTLKARMD 275
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI G+ V +V K+ +A+DRR ++I I DR+ + +G D Q
Sbjct: 17 SIKILKGTTTVGLVAKDSVVLAADRRASAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQ 76
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
+Y + + + R + ++ A+ ++ +L + ++ PY Q +I G + +P +
Sbjct: 77 FIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVLSQSKYFPYLVQILIGGY--DTQPRLF 134
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+D +G + +V G+ G E ++PD+ +E + ++A+LS++ RD +G
Sbjct: 135 NLDYLG-DMTEETYVATGSGSPVAMGVLEDGYRPDLSGEEAMDLGARAVLSAIKRDSFTG 193
Query: 182 WG 183
G
Sbjct: 194 TG 195
>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
Length = 248
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G + +A D R +I + +Q ++ + D + + +G + D L +
Sbjct: 43 NGGTVLGIAGDDFALLAGDTR-NTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIE 101
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ +LY + + +K ++ A + +LY KRF PY+ +IAGL +E K + + D
Sbjct: 102 NIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGKGAVYSYDP 161
Query: 126 IGAKELAKDFVVAGTAGESLY----------GACEAMFKPDMEPDELFETVSQALLSSVD 175
+G+ E ++F AG + SL + P + +E + V A S+ +
Sbjct: 162 VGSYE--REFCRAGGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDAFSSATE 219
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
R G G + IVT +++ + D
Sbjct: 220 RHIHVGDGLEILIVTKEGVRKEFFPLKRD 248
>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 242
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + GK+ +A D R V+ +I + ++ +I + D + + +G A D + L
Sbjct: 28 NGGTVLGIAGKDFAVLAGDTR-HVEGYSINSRYEPKIFNVGDDIVMTANGFAADGKALIN 86
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ K Y+ ++ ++ A + LLY KRF PY+ +IAGL DE K + + D
Sbjct: 87 SFKTQLKWYKFDHNDKRFSIQSAARYIRHLLYGKRFFPYYVSTLIAGLDDEGKGCVYSFD 146
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETV 166
+G+ E ++ AG + SL + + FK EP DE+ E V
Sbjct: 147 PVGSYE--REQCRAGGSASSLIMPFLDNQVNFKNQYEPDSDGKVKKPLRYLELDEVLELV 204
Query: 167 SQALLSSVDRDCLSGWGGHVYIVTPTEIK 195
A S+ +R G G ++IVT ++
Sbjct: 205 KDAFSSATERHIQVGDGLEIHIVTKEGVR 233
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL D + ++ + SG DS TL +
Sbjct: 24 FNGGNILAVAGGDFAVVASDTRLSQGFMIHTRDHPKAVQLTANTVLAQSGFEGDSLTLKK 83
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R +Y+ + A+++S +LY KRF PY+ ++AGL +E K + + D
Sbjct: 84 HVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKRFFPYYVYNIVAGLDNEGKGCVYSYDP 143
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM--FK------PDMEPDELFETVSQALLSSVDRD 177
+G+ E + + AG A E L + FK P + + + +S+ +RD
Sbjct: 144 VGSYE-REQYRAAGAANELLQPLLDNQIGFKNMSEAGPPLSKERAVQLCIDCFISAAERD 202
Query: 178 CLSG 181
+G
Sbjct: 203 ITTG 206
>gi|318037293|ref|NP_001187911.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
gi|308324307|gb|ADO29288.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
Length = 214
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ +VA+ I SD R V +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 12 TGTTIVAVKYNGGVIIGSDSRASVGGSYVSSKAINKLIQVHDRIFCCIAGSLADAQHVTR 71
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F+ + ++ + A+++ L Y R F + AG + P + T+
Sbjct: 72 VAKFQLSFHSIQMGSPPLVKAAATVLKELCYSNREDLEAGF---ITAGWDKKKGPQVYTV 128
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
S+G +++ F + G+ +YG +A +KPDM +E + V AL ++ RD +SG
Sbjct: 129 -SMGGMLISQPFTIGGSGSTYMYGYMDAKYKPDMSREECVQFVKNALALAIGRDNVSGGI 187
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 188 AHLVVITEGGVEHVVVPG 205
>gi|384501791|gb|EIE92282.1| proteasome subunit beta type-6 [Rhizopus delemar RA 99-880]
Length = 211
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD +++K+HD+++ SG A D+Q +
Sbjct: 11 GTSIMAVAYKDGVILGADSRTTTGAYIANRVTD--KLTKVHDKIYCCRSGSAADTQAIAD 68
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + ++Y + E+ T +L L Y+ + ++AG ++D P + +
Sbjct: 69 IVHYYLQMYSVNEDEVPTVRTAGALFQELCYQNK-DHLMAGIIVAGWDEKDGPSVYNV-P 126
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G F + G+ +YG C+A +K DM +E E V +L ++ RD SG
Sbjct: 127 LGGSLHKAPFAIGGSGSTYIYGYCDAKYKDDMSREECIEFVKNSLALAMSRDGSSGGVIR 186
Query: 186 VYIVTPTEIKERILKGR 202
+ ++T ++ + G
Sbjct: 187 MAVITKEGVERLFVPGN 203
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+DRR +++ + D + I +G D Q +Y+ L
Sbjct: 10 GTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKVLYVTDNIGITTAGSVADLQFIYEAL 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ + + E + + A+ ++ +L ++ PY Q +I G+ +D+P + +D +G
Sbjct: 70 KYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGV--DDQPRLYNLDYLG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+++ G+ G E +KP+M DE E +A+ SS+ RD +G G V
Sbjct: 128 -DITEEEYTATGSGSPEALGVLEDNYKPEMSLDEAAELAKRAIFSSIKRDSFTGTGVIVT 186
Query: 188 IVTPTEIKER 197
+T +E+
Sbjct: 187 KITKNGHEEK 196
>gi|448729602|ref|ZP_21711917.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
gi|445794904|gb|EMA45442.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
Length = 232
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + D +++ ++H + ++G + +Q+L L
Sbjct: 38 GTTTVGLTAEGGVVLAADMRASAGNMVASKDARKVLEVHPTAALTIAGSVSAAQSLVNSL 97
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R + M E A+L + LL F + QPV+ G+ D+D + ++ G
Sbjct: 98 QAEVRLYETRRDTGMSLEALANLTANLLRSGNF--HIVQPVLGGV-DDDGSHVYSIGP-G 153
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+A+D+ V+G+ G E + M D+ ++A+ S+ +RD SG G
Sbjct: 154 GSVMAEDYAVSGSGSPFALGVLEQEYDEGMSVDDAETIAARAVQSATERDTASGNG 209
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +AS++R + + +++ +I D + + +G D+Q L + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY++R M + A+L+S L R+ P Q +I G+ D++ P I ++D +G
Sbjct: 69 SVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGV-DKNGPAIYSLDPMG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
G+ YG E ++ D+ E + +A+ ++ RD SG V
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNATKRDSASGENIDVV 187
Query: 188 IVT--------PTEIKER 197
++T P E+K R
Sbjct: 188 VITKEAFKRLDPEEVKSR 205
>gi|384489923|gb|EIE81145.1| proteasome subunit beta type-6 [Rhizopus delemar RA 99-880]
Length = 224
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD +++K+HD+++ SG A D+Q +
Sbjct: 21 GTSIMAVAYKDGVILGADSRTTTGAYIANRVTD--KLTKVHDKIYCCRSGSAADTQAIAD 78
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + ++Y + E+ T ++L L Y+ + ++AG ++D P + +
Sbjct: 79 IVHYYLQMYSVNEDEAPSVRTASALFQELCYQNK-DNLMAGIIVAGWDEKDGPSVYNV-P 136
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G F + G+ +YG C+A +K DM +E E V +L ++ RD SG
Sbjct: 137 LGGSLHKAPFAIGGSGSTYIYGYCDAKYKDDMTREECEEFVKNSLALAMSRDGSSGGVIR 196
Query: 186 VYIVTPTEIKERILKGR 202
+ ++T ++ + G
Sbjct: 197 MAVITKDGVERLFVPGN 213
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +AS++R + + +++ +I D + + +G D+Q L + +
Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY++R + M + +L+S L R+ P Q +I G+ D++ P I ++D++G
Sbjct: 69 SVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGV-DKNGPGIYSLDAMG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
G+ YG E ++ +M E + +A+ ++ RD SG V
Sbjct: 128 GSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVV 187
Query: 188 IVT--------PTEIKER 197
++T P E+K R
Sbjct: 188 VITKEAFKRLDPEEVKSR 205
>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
24927]
Length = 266
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ IA D R +++ I L +G+ G++ D + L ++
Sbjct: 33 NGGCILGIAGKDYVIIAGDTRSSEGYSINTRTARKVYDIGSGLILGVVGMSADGEELVRK 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + Y+ ++ + A ++S +LY+KRF PY+CQP++ GL +E I + D +
Sbjct: 93 VARKIDDYKRNHDKHITVAAAAVMLSRILYQKRFFPYYCQPLLGGLDEEGVGAIYSYDYV 152
Query: 127 GAKELA----------------------KDFVVAGTAGESLYGACEAMFKPDMEPDELFE 164
G+ E K+ V G+ GE E K D+ +++ +
Sbjct: 153 GSFEREQSRAYGAAASLITPFLDNQINFKNQFVPGSNGE------EPRPKVDLSKEQVEK 206
Query: 165 TVSQALLSSVDRDCLSGWG 183
V A S+V+R G G
Sbjct: 207 IVKDAFTSAVERHIEVGDG 225
>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans CBS 6340]
Length = 242
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D L +R
Sbjct: 28 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNILISANGFAADGNALVKR 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 88 FQNSLKWYHFDHNDKKLSMRSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 147
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEPD---------------ELFETVS 167
+G+ E ++ AG A SL + + FK EPD E+ + V
Sbjct: 148 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPDSHGTKRKHVKFLTVEEVVQLVR 205
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT +++ + + D
Sbjct: 206 DAFSSATERHIHVGDGVEILIVTKEGVRKEFFELKRD 242
>gi|345004933|ref|YP_004807786.1| proteasome endopeptidase complex subunit beta [halophilic archaeon
DL31]
gi|344320559|gb|AEN05413.1| proteasome endopeptidase complex, beta subunit [halophilic archaeon
DL31]
Length = 242
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + + + +A+D R + + D Q++ ++H + ++G + +Q L + L
Sbjct: 48 GTTTLGIDTGDAVVLATDMRASLGHMVSSKDVQKVEQVHPHGALTIAGSVSAAQNLIETL 107
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
L+++R ++M + ++L LL F Y P++ G+ D + + ++D++G
Sbjct: 108 RAESNLFEVRRGKEMSMQALSTLTGNLLRSGAF--YIVSPILGGV-DSEGSHVYSIDALG 164
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+D+ V+G+ + G E + D++ + ++A+ S+++RD SG G ++
Sbjct: 165 GT-TEEDYAVSGSGSQFALGVLEQEYDDDLDIEGAKTVATKAIKSAMERDTASGNGINIA 223
Query: 188 IVT 190
+VT
Sbjct: 224 VVT 226
>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
Length = 200
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 16 GKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQ 75
++ +A+D + + + ++I I DR+ I +G D Q L + L + YQ
Sbjct: 15 ARDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARYYQ 74
Query: 76 LREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDF 135
R M A+L+S +L E ++ PY Q +I G DE P + +D++G + D+
Sbjct: 75 FTWNRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTLANLDAMGGL-VFDDY 131
Query: 136 VVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG-WGGHVYIVTPTEI 194
G+ E FK DM +E E +A+ ++ RD +G V ++T +
Sbjct: 132 TATGSGSPFAIAVLEDGFKKDMSVEEAKELAVRAVRTAGKRDVYTGDRKVQVVVITKDGM 191
Query: 195 KERILK 200
KE ++
Sbjct: 192 KEEFVE 197
>gi|328774191|gb|EGF84228.1| hypothetical protein BATDEDRAFT_15564 [Batrachochytrium
dendrobatidis JAM81]
Length = 214
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 8 GSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ + +A+D R +G + TD ++++IH+R+F SG A D+Q +
Sbjct: 14 GTTIMAVQFADGVVVAADSRTTMGSYIANRVTD--KLTQIHERIFCCRSGSAADTQAVAD 71
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++ +++ + E K ET A++ ++YE + ++AG + P + ++
Sbjct: 72 MVHYQLQVFSVTEGVLPKVETAANMFQRIVYENK-DRLMAGIIVAGWDPVNGPSVYSI-P 129
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + F + G+ +YG C+A FK DM +E + A+ ++ RD SG
Sbjct: 130 LGGSLHKRPFTIGGSGSSYIYGYCDATFKDDMTREEAIQFTKNAVSLAMSRDGSSGGTIR 189
Query: 186 VYIVTPTEIKERIL 199
+ I+T + ERI
Sbjct: 190 LAIITKDNV-ERIF 202
>gi|367001675|ref|XP_003685572.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
gi|357523871|emb|CCE63138.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
Length = 241
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDDIIISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSIKWYHFDNNDKKLALSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++F AG A SL + + FK P DE+ + V
Sbjct: 147 VGSYE--REFCRAGGAAASLIMPFLDNQVNFKNQYTPDSNGKVKRPFKHLSIDEVIKLVR 204
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT +++ + + D
Sbjct: 205 DAFTSATERHIHVGDGLEILIVTKEGVRKEFYELKRD 241
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
+ +AS+RRL ++ +++ KI+ L G +G+ D QTL + + K Y++
Sbjct: 14 NDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAG-AGIYGDLQTLTRIMNVEIKYYEV 72
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFV 136
+ + A L+S +LY+ + P+ + + G+ DE P + +D IG+ + ++
Sbjct: 73 STGKPISVHAAAKLLSVILYQYKVMPFISEILFGGV-DEKGPQLYVLDPIGSL-IEDNYA 130
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G+ G E+ + P+M D + +++A+ +S++RD SG G
Sbjct: 131 AVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSGDG 177
>gi|377834609|ref|XP_003689507.1| PREDICTED: proteasome subunit beta type-1-like [Mus musculus]
Length = 276
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R L+ + M+ A+++S + +RF PY+ +I GL +E K + + D
Sbjct: 94 IIETR-----LKMNKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 148
Query: 126 IGAKELAKDFVVAGTAGES-----LYGAC--EAMFKPDMEP---DELFETVSQALLSSVD 175
+G+ + +D V AG + + L+ M + P D V +S+ +
Sbjct: 149 VGSYQ--RDSVKAGASASATLQPLLHNQTGFRRMQSVEHVPRILDRAMRLVKDVFISAAE 206
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + IVT I+E + R D
Sbjct: 207 RDVYTGDALRICIVTKEGIREETVPLRKD 235
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + Q++ +H + ++G + +Q+L + L
Sbjct: 47 GTTTVGLRAEDGVVLATDMRASLGNMVSSKTVQKVEDVHPTGALTIAGSVSAAQSLIRTL 106
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY R+ DM ++L S LL F + PV+ G+ DE P I +MD++G
Sbjct: 107 RAEVNLYDARQGEDMSMTALSTLTSNLLRSGGF--FIVVPVLGGVDDE-GPHIYSMDALG 163
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + V+G+ + G E ++ + +E + +++ S+V+RD SG G ++
Sbjct: 164 GT-TEETYAVSGSGSQFALGVLEQHYEEGLSVEEARDVAIRSVGSAVERDTASGNGINIA 222
Query: 188 IVT 190
VT
Sbjct: 223 TVT 225
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+N + A+ + +A D+R+ ++ D +++++ D +F+ SG+ D L +
Sbjct: 41 FNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSK 100
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+L R +Y+ + ASL+S LY KRF PY+ ++AG D+ + + D+
Sbjct: 101 QLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLVINYDA 160
Query: 126 IGAKELAKDFVVAGTAGE 143
+G+ + K + V G+ +
Sbjct: 161 VGSGDFKK-YAVLGSGAQ 177
>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
Length = 236
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 7 NGSALVAMVGKNCFAIASDRRL---GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
NG ++A+ GK+ IA D R+ G +QT + ++ ++ ++ + SG+ D+ L
Sbjct: 29 NGGTVMAVAGKDYCVIAGDTRMSDGGYGIQT--RHYTKVFQLTNKCVLATSGMQADTIAL 86
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+RL + YQ + M A +S LY KRF PY+ ++AG+ ++ + +I T
Sbjct: 87 QKRLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEKGEGWIWTY 146
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMF----------KPDMEPDELFETVSQALLSS 173
D++G+ E K + G+ + + + D+ D++ V A+ S+
Sbjct: 147 DAVGSHERVK-YSSQGSGNQLVIPLLDNQVAKRNQQIIQGNGDVSCDQVVSFVKDAITSA 205
Query: 174 VDRDCLSG 181
+RD +G
Sbjct: 206 GERDIYTG 213
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ A++ R + +I KI D + ++G +D+Q+L + +
Sbjct: 9 GTTTVGLTCKDGVVFATETRATMGNLVAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYI 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
L++LR + + E A+L S +L+ R P++ Q ++ G+ D+ P + ++D G
Sbjct: 69 RAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGV-DDKGPALYSLDPTG 127
Query: 128 AKELAKDFVVAGTAGESL-YGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
+ KD V++ +G + YG E + D+ +E + +A+ S+++RD S G +
Sbjct: 128 G--VIKDLVISTGSGSPVAYGVLEDRYSQDLYVEEGIDVAIRAIKSAMERDTYS--GNSI 183
Query: 187 YIVTPTE 193
+ T TE
Sbjct: 184 LVATITE 190
>gi|18859269|ref|NP_571751.1| proteasome beta 11 subunit [Danio rerio]
gi|5833455|gb|AAD53516.1|AF155576_1 proteasome subunit beta 11 [Danio rerio]
gi|29561857|emb|CAD87790.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|49903219|gb|AAH76475.1| Psmb11 protein [Danio rerio]
gi|94732366|emb|CAK04957.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|182889396|gb|AAI65038.1| Psmb11 protein [Danio rerio]
Length = 217
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 15 TGTTILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLY----EKRFGPYFCQPVIAGLSDEDKPFIC 121
F+ + ++ E + AS++ L Y E R G + AG + P I
Sbjct: 75 MAKFQLSFHSIQMESPPLVKAAASIMRELCYSNKEELRAGF-----ITAGWDRKKGPQIY 129
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+ S+G L++ F + G+ +YG +A FKPDM +E + + AL ++ RD +SG
Sbjct: 130 VV-SLGGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALALAMGRDNVSG 188
Query: 182 WGGHVYIVTPTEIKERILKG 201
H+ ++T +K ++ G
Sbjct: 189 GVVHLVVITEAGVKHIVVPG 208
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
N ++A+ +A D RL + D ++S++ D+ + +G D L +
Sbjct: 35 NSGTVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLATAGQYADFIALRKF 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R +LY+ + E +T A L+S LY +RF PY+ ++AGL + + + D+I
Sbjct: 95 LQQRLQLYEFQNEVQASTQTVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYDAI 154
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLS--------SVDRDC 178
G+ + + V G+ E + + K + ++ F Q +L + +RD
Sbjct: 155 GSYD-QMTYGVQGSGQELVVAVLDNQLKGYNKINKTFPQTQQEILDLILDCFSCAAERDI 213
Query: 179 LSGWGGHVYIVTPTEIKERILK 200
+G + I+TPT ERI+K
Sbjct: 214 HTGDNVEILIITPTG-TERIVK 234
>gi|448729804|ref|ZP_21712116.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
gi|445794125|gb|EMA44678.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
Length = 237
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A+DRR + ++I++IH R + +SG + +Q L L LY+ R +
Sbjct: 57 LATDRRASFGNMVSSKQAKKIAEIHPRGALTISGAVSPAQALISNLRAEVDLYEARRSEE 116
Query: 82 MKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGT 140
M + ++L S L R G +F P++ G+ DE I ++D G+ + +D+ G+
Sbjct: 117 MSMQALSTLTSNFL---RSGAFFIVHPILGGVDDEGS-HIYSIDPSGSV-MEEDYNATGS 171
Query: 141 AGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
YG E ++ + DE + A+ S+V+RD SG G V +T
Sbjct: 172 GSPFAYGVLEQQYEEGLSNDEAETVAAHAVKSAVERDTASGNGIIVSTIT 221
>gi|448733676|ref|ZP_21715918.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
gi|445802196|gb|EMA52503.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
Length = 237
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A+DRR + ++I++IH R + +SG + +Q L L LY+ R +
Sbjct: 57 LATDRRASAGNMVASKQAEKIAEIHPRGALTISGAVSAAQALISNLKAEVDLYEARRGEE 116
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
M + ++L L F + QPV+ G+ DE I +D IG + +D+ V+G+
Sbjct: 117 MSMQALSTLTGNFLRSGAF--FIVQPVLGGVDDEGS-HIYRID-IGGSVMEEDYAVSGSG 172
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKER 197
G E + + DE ++A+ S+V+RD SG G +T +E+ E
Sbjct: 173 SPFALGVLEQEYDDGLSMDEAETVAARAVKSAVERDTASGNG-----ITLSEVTEE 223
>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
Length = 212
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
+VA+ G++ +A R+ + D + ++ D++ + +G+ D + L++ L R
Sbjct: 15 VVAVAGEDYCIVAGSTRMSTGFSILTRDASMLLQLTDKVVVASAGMQADRKALHKLLQHR 74
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 130
+ YQ R M A L+S LY RF P + ++AGL ++ + + D+IG+ E
Sbjct: 75 NVTYQHNHGRAMGVSAAAQLLSNTLYYNRFFPLYTFNLVAGLDEQGRGAVYNYDAIGSYE 134
Query: 131 LAKDFVVAGTAGESLYGACEAMF-KPDMEPD----ELFETVSQALLSSVDRDCLSGWGGH 185
+ F G+ E + E + +PD+ + V A +S+ +RD +G
Sbjct: 135 RSGYF-CQGSGKELIQPVLEGILRRPDVHVPFRTCMALDLVKDAFVSAGERDIYTGDKVE 193
Query: 186 VYIVTPTEIKERILKGRMD 204
+ I+T IK L+ ++D
Sbjct: 194 ILIITKDGIKREELQLKLD 212
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R L+ + M+ A+++S + +RF PY+ +I GL +E K + + D
Sbjct: 94 IIETR-----LKMNKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 148
Query: 126 IGAKELAKDFVVAGTAGESLYGAC-------EAMFKPDMEP---DELFETVSQALLSSVD 175
+G+ + +D V AG + + M + P D V +S+ +
Sbjct: 149 VGSYQ--RDSVKAGASASATLQPLLHNQTGFRRMQSVEHVPRILDRAMRLVKDVFISAAE 206
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G + IVT I+E + R D
Sbjct: 207 RDVYTGDALRICIVTKEGIREETVPLRKD 235
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V +A++RR + + ++I +I D + + +G D+Q + + +
Sbjct: 9 GTTTVGIVCDKGVVLATERRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRVM 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY++R + M + +L+S +L +R+ P Q ++ G+ D++ P I ++D++G
Sbjct: 69 SVESHLYKMRRKEPMTIKGITTLLSNILSGQRYYPLMVQLLVGGV-DKNGPAIFSLDALG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
V G+ YG E F + +E E +AL +++ RD SG G V
Sbjct: 128 GTIEETKAVATGSGSPMAYGVLEDRFVDGLSIEEGVELAIRALHNAMKRDSASGNGIDVV 187
Query: 188 IVT 190
++T
Sbjct: 188 VIT 190
>gi|448671267|ref|ZP_21687206.1| proteasome subunit beta [Haloarcula amylolytica JCM 13557]
gi|445765870|gb|EMA17007.1| proteasome subunit beta [Haloarcula amylolytica JCM 13557]
Length = 230
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + +N IA+DRR + + ++ Q++ +IH + L G +Q+ +
Sbjct: 35 GTTTVGIATENGVVIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDS 125
L LY++R + + A+L R GPYF P++ G+ DE+ + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNF---ARGGPYFAINPIVGGV-DEEGSHVYSVDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G L D+ V G+ G E + P+M E + +A+ ++ +RD SG G
Sbjct: 151 AGGV-LEDDYTVTGSGTMVATGTIEGQYDPEMSLGEARDLAIRAVNAAAERDTGSGNG 207
>gi|209733156|gb|ACI67447.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++ + I SD R + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 15 TGTTILTVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F+ + ++ E + AS++ L Y + F + AG + P + T+
Sbjct: 75 AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGF---ITAGWDRKKGPQVYTV 131
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
++G L++ F + G+ +YG +A +KPDM +E + AL ++ RD ++G
Sbjct: 132 -ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVTGGV 190
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 191 AHLVVITEEGVEHVVIPG 208
>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
RN66]
Length = 245
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + +A+ G + I SD RL + + R+ +I + + SG+ D L +
Sbjct: 41 NGGSCIALAGSDFAVIVSDTRLSQGYRIASRSVTRVFEITAKCVLSCSGMFADITALQKL 100
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R K+Y+ ++ A L+S +LY KRF PY+C IAGL + D++
Sbjct: 101 IRARVKIYEFEHKKSPSIGAVAQLLSTVLYSKRFFPYYCYCAIAGLDEYGNGVAYGYDAV 160
Query: 127 GAKELAKDF-------VVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
G+ + K F +++ + G + K ++ + + A+ S+ +RD
Sbjct: 161 GSFQSGKYFANGTGSHLISSILDNQISGNNQLYPKILTNKVDMIDLLKDAITSASERDVY 220
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+G V ++ + I R D
Sbjct: 221 TGDSAQVVVIDASGISISSFPLRQD 245
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI E V + + +A+++R+ + +++ K++D + + G+ D Q
Sbjct: 3 SIEELITGTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGMASIGILADMQ 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + LY L + + A L+S +L+ R PYF + ++ G+ DE P +
Sbjct: 63 VLTKIAKAYMSLYSLDTKTRPSIRSAAKLLSYVLFSNRILPYFVEVLVGGIDDEG-PHLF 121
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
MD++G+ + D+ GT + E+ +KP M E + +A+ S+ RD +SG
Sbjct: 122 IMDALGSL-IEDDYAAVGTGTKLAIAILESNYKPGMSIKEARDLAIKAINQSISRDPVSG 180
Query: 182 WGGHVYIVT 190
G + +T
Sbjct: 181 DGIDILTIT 189
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ V ++ +AS+ R + ++ ++I +I D + + +G D+Q+L +
Sbjct: 5 FKGTTTVGVLCDGGVVLASESRATMGSFIASSQAKKIYQIDDLVGMTTAGGVGDAQSLVR 64
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ +LY+++ + + ++++ +L +R+ P+ Q ++ G+ D P I ++D+
Sbjct: 65 MVQVEARLYKMQRGEGLTVKAVTTMLANILSSRRYYPFMVQLIMGGV-DRYGPRIYSLDA 123
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+G + + V G+ YG EAM+KP + ++ ++A+ +++ RD SG
Sbjct: 124 LGGQIEERRIVATGSGSPVAYGVLEAMYKPGISVEDGTVLAARAIHNALKRDSASG 179
>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
Length = 222
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ GK+ +ASD RL ++ ++ D+ +G +G D+ +L
Sbjct: 21 NGGSIVAISGKDFAIVASDTRLSEGYMIYTRKQSKLFQLSDKSVLGCTGCWCDTLSLTNI 80
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + K Y M+P + A L+S LLY +RF PY+ V+AGL + + + D +
Sbjct: 81 IQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYVYNVLAGLDINGEGCLYSYDPV 140
Query: 127 GAKELAKDFVVAGTAG-------ESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCL 179
G E ++ G++G +S G A P E +E V A ++ +RD
Sbjct: 141 GHCEKV-NYTAGGSSGVLMQPFLDSWLGNRTAE-NPVTE-EEALSLVKDAFTAAGERDIY 197
Query: 180 SGWGGHVYIVTPTEIKERILKGRMD 204
+G I+ IK +++ R D
Sbjct: 198 TGDEVVYNIIKKNGIKTGVVQLRKD 222
>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 228
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLG------KGCVFT 121
Query: 123 MDSIGAKE 130
D++G+ E
Sbjct: 122 YDAVGSYE 129
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+ T G+ V + + +A++RR+ ++ + + +++ +I + ++GL D+
Sbjct: 1 MNQTLETGTTTVGITLTDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + + +LY+L+ +M E A+L+S +L + ++ PY Q ++ G+ + P +
Sbjct: 61 QVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTSPHV 118
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
++D+ G + + G+ +YG E+ + + DE + V +A+ ++ RD S
Sbjct: 119 FSIDAAGG-SVEDIYASTGSGSPFVYGVLESQYNEKLSIDEGVDLVIRAISAAKQRDSAS 177
Query: 181 GWGGHVYIVT--------PTE-IKERILK 200
G V ++T PTE I+ RI K
Sbjct: 178 GGMIDVAVITKKDGYVQLPTEQIEARIKK 206
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
+ +AS+RRL ++ +++ KI L G +G+ D QTL + + K Y++
Sbjct: 14 NDGIVLASERRLSYGGYVLSKQAKKVHKIGKFLMAG-AGIYGDLQTLTRIMNVEIKYYEI 72
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFV 136
+ + A L+S +LY+ + P+ + + G+ DE P + +D IG+ + ++
Sbjct: 73 STGKPISVHAAAKLLSVILYQYKVMPFISEILFGGV-DEKGPQLYVLDPIGSL-IEDNYA 130
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G+ G E+ + P+M D + +++A+ +S++RD SG G
Sbjct: 131 AVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKASIERDITSGDG 177
>gi|448727796|ref|ZP_21710145.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445789782|gb|EMA40461.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 228
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
+ +A+DRR + ++I++IH R + +SG + +Q L L LY+ R
Sbjct: 44 DGVVLATDRRASAGNLVASKRAKKIAEIHPRGALTISGAVSAAQALISNLQAEVDLYEAR 103
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVV 137
+M + ++L S L F Y QP++ G+ DE I ++D G+ + +++
Sbjct: 104 RGEEMSMQALSTLTSNFLRSGAF--YIVQPILGGVDDE-GAHIYSIDPAGSV-MEEEYDA 159
Query: 138 AGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G+ YG E ++ + DE ++A+ S+V+RD SG G
Sbjct: 160 TGSGSPFAYGVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNG 205
>gi|448382258|ref|ZP_21562014.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
thermotolerans DSM 11522]
gi|445662091|gb|ELZ14865.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
thermotolerans DSM 11522]
Length = 243
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+ R
Sbjct: 62 IATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEARRGE 121
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
+M E A+L R GP+F P++ G+ DE + ++D G + D+ V G
Sbjct: 122 NMSIEALATLAGNF---ARGGPFFAIHPILGGVDDEGS-HVYSIDPAGGV-MEDDYTVTG 176
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ + YG E ++PDM +E ++ + S+V+RD SG G
Sbjct: 177 SGMQLAYGHLEQAYEPDMSTEEAKTVAARGIKSAVERDTGSGNG 220
>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + R+ + D + + +G + D L +
Sbjct: 27 NGGTVLGIAGEDFAVLAGDTRQVVGYSINSRYEPRVFDVGDNILMTANGFSADGNALINK 86
Query: 67 LVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y+ + + ++ A + LLY KRF P++ +IAGL+DE K + + D
Sbjct: 87 FKNSLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPFYVSTLIAGLNDEGKGVVYSYDP 146
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E+ + AG A SL + + FK EP DE+ + V
Sbjct: 147 VGSYEVEQ--CRAGGAAASLIMPFLDNQVNFKNQYEPGTNGEKKKELRYLSLDEVVQLVR 204
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIK 195
A S +R G G +YIV +K
Sbjct: 205 DAFTSVTERHIYVGDGLEIYIVNKDGVK 232
>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 149
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 143
>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 215
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 1 MSITEYNG--------SALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIG 52
+S T +NG ++ + N IA ++RL ++ + +++ I + IG
Sbjct: 4 VSTTVFNGVFVMSSLPGTVLGIKANNGIVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIG 63
Query: 53 LSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL 112
+GL D+Q + + L + Y+L+ ER+++ A ++S LLY + P + V+ G
Sbjct: 64 FAGLVGDAQFIIRALRLEAENYKLQLEREIRVRGLAKILSLLLYSYKLAPLMTEIVVGGY 123
Query: 113 SDEDKPFICTMDSIGAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALL 171
D+ P I +D +G+ L +D +V G+ G G E ++ D++ DE + A+
Sbjct: 124 -DDKGPQIYVLDPVGS--LIEDKYVALGSGGPIALGIIEKEYREDIDIDEAEKLAVSAIR 180
Query: 172 SSVDRDCLSGWGGHVYIVT 190
+++RD +SG G V +T
Sbjct: 181 EAIERDAVSGDGVDVLRIT 199
>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
Length = 229
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++VA+ G++ IA D R+ + D +S+ +LF IG G D
Sbjct: 29 NGGSIVAIAGEDFVTIAGDTRM------VNEDDAIVSRSQSKLFQLTPMTAIGSVGCFAD 82
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
+ + + +YQL + + + A ++S +Y RF PYF ++AG+ K
Sbjct: 83 TLAVVNVIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVAGIDRNGKGA 142
Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDEL---FETVSQALLSSVDR 176
+ + D IG E K + AGT E + A + K EP + E + ++ + ++
Sbjct: 143 VFSYDPIGHHE-RKAYDAAGTGFELMIPAMDYFIKNLKEPLTIEIAAEITRKVMIVADNK 201
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
D +G +YI+T ++ + + R D
Sbjct: 202 DVYTGDSAIMYIITKNGVEAKKMPLRKD 229
>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
Marburg]
gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 210
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 8 GSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ V + K+ A++RR +G + ATD +I KI + + ++G D+Q+L +
Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATD--KIFKIDEHIAATIAGSVADAQSLMK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L LY++R + E A+L + +L+ RF P+ Q ++ G+ DE I ++D
Sbjct: 67 YLKAEAALYRMRNSERISIEAAAALAANILHSSRFYPFIVQTLLGGV-DETGAKIYSLDP 125
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
G + FV G+ YG E + ++ D+ + +A+ S+++RD SG G
Sbjct: 126 SGGM-IPDRFVSTGSGSPVAYGVLEDRYADELYVDDAIDIAIRAIKSAMERDTYSGNGIL 184
Query: 186 VYIVTPTE 193
V VT E
Sbjct: 185 VATVTEEE 192
>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_b [Homo sapiens]
Length = 166
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 197
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A++RRL ++ +++ KI R I +G+ D QTL + + K Y++ +
Sbjct: 19 LAAERRLSYGGFVLSRSAKKVFKIG-RFGIAGAGIMGDIQTLTRLMNVEIKYYEMYNNKP 77
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
+ + A L+S +LY+ ++ P+ + + G+ DE P + +D IG+ + ++ G+
Sbjct: 78 ISVKAAAKLLSVILYQYKWTPFISELLFGGVDDEG-PKLFVLDPIGSL-IEDNYAAVGSG 135
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G E+ + P M D+ E V +AL ++++RD SG G
Sbjct: 136 ARVAIGVLESEYDPSMNLDKGKEIVLKALKAAIERDVTSGDG 177
>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
Length = 262
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
++ NG ++A+ G+ IASD R+ L D ++ + + +GL D+ ++
Sbjct: 51 SDTNGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISM 110
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
L R ++Y+ + + + A ++S ++Y +RF PY ++AG+ K +
Sbjct: 111 TSLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYY 170
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACE--------AMFKPDMEP----DELFETVSQALL 171
D +G E + + V G++G+ L A + + PD P + L
Sbjct: 171 DPVGHMERCR-YRVLGSSGKMLLPALDHGLGWEHHTLVPPDQYPPLDKERALALARNCLR 229
Query: 172 SSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ DRD +G G + ++T I+ L R D
Sbjct: 230 VASDRDLFTGDTGVLKLITKDGIETETLPLRKD 262
>gi|359415410|ref|ZP_09207873.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
gi|358034267|gb|EHK02709.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
Length = 215
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
++ +A+DRR + T + Q+I ++ + L + ++G D+Q + + + + KL++L
Sbjct: 27 EDGVVLAADRRASMGHLTASKYAQKIYRLDENLGLTIAGSVGDAQRIVRMMRSQLKLHKL 86
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFV 136
E +++ +L+S +L+ + PY Q ++ GL D + +D G F
Sbjct: 87 -ETKELSVRGAGTLLSNILHSSKMMPYMNQFILGGLEDGNGKLF-DLDPAGGLMEHNYFT 144
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 193
G+ + YG E ++ DM E E +A+ S+++RD SG G + +V TE
Sbjct: 145 ATGSGSQMAYGVLEDHYEEDMGHSEGLELAKKAIKSAMERDTASGNG--IMVVEITE 199
>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_c [Homo sapiens]
Length = 147
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_d [Homo sapiens]
Length = 205
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQ-RISKI-----HDRLFIGLSGLATDSQTLYQRL 67
M+ A+ R LG++ A Q R S D+ IG SG D TL + +
Sbjct: 1 MLSSTAMYSAAGRDLGMEPHRAAGPLQLRFSPYVFNGGTDKTVIGCSGFHGDCLTLTKII 60
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G
Sbjct: 61 EARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 120
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQAL 170
+ + +D AG G+ AM +P ++ D V
Sbjct: 121 SYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 171
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 172 ISAAERDVYTGDALRICIVTKEGIREETVSLRKD 205
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Query: 1 MSITE-YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATD 59
+ +TE + G+ V +V K+ +A+DRR + A + +I KI + L I +G D
Sbjct: 2 LQLTEKFKGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGD 61
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
L + L KLY + + M + A+L++ ++ ++ PY ++ G ++KP
Sbjct: 62 ILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGY--DEKPK 119
Query: 120 ICTMDSIGAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDC 178
+ ++D +G + +D + AG+ E Y ++ +K ++ +E + +A+ +++ RD
Sbjct: 120 LYSVDMVGG--ITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDV 177
Query: 179 LSGWGGHVYIVTPTEIKE 196
SG G V +T KE
Sbjct: 178 FSGDGILVVTITKEGYKE 195
>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
Length = 242
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 28 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 88 FKNSIKWYHFDNNDKTLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 147
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A SL + + FK EP DE+ V
Sbjct: 148 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPDSDGTVKRPLKFLSIDEVIRLVR 205
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT +++ + + D
Sbjct: 206 DAFTSATERHIHVGDGLEILIVTKDGVRKEFYELKRD 242
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ A++ R + +I KI D + ++G +D+Q+L + +
Sbjct: 9 GTTTVGLTCKDGVVFATETRATMGNLIAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYI 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
L++LR + + E A+L S +L+ R P++ Q ++ G+ D+ P + ++D G
Sbjct: 69 RAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGV-DDKGPALYSLDPTG 127
Query: 128 AKELAKDFVVAGTAGESL-YGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
+ KD +++ +G + YG E + D+ +E + +A+ S+++RD SG V
Sbjct: 128 G--VIKDLMISTGSGSPVAYGVLEDRYSEDLYVEEGIDVAIRAIKSAMERDAYSGNSILV 185
Query: 187 YIVTPTE 193
+T E
Sbjct: 186 ATITEAE 192
>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
Length = 241
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + ++ A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSIKWYHFDHNDKKLSIKSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A SL + + FK EP DE+ V
Sbjct: 147 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPGSDGKVKRPLKYLNIDEVISLVR 204
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
A S+ +R G G + IVT +++
Sbjct: 205 DAFTSATERHIHVGDGLEILIVTKEGVRK 233
>gi|433591793|ref|YP_007281289.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|448334129|ref|ZP_21523310.1| proteasome endopeptidase complex, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|433306573|gb|AGB32385.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|445620471|gb|ELY73968.1| proteasome endopeptidase complex, beta subunit [Natrinema
pellirubrum DSM 15624]
Length = 243
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+ R
Sbjct: 62 IATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYEARRGE 121
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
+M E A+L R GP+F P++ G+ DE + ++D G + D+ V G
Sbjct: 122 NMSIEALATLAGNF---ARGGPFFAIHPILGGVDDEGS-HVYSIDPAGGV-MEDDYTVTG 176
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ + YG E ++PDM +E ++ + S+V+RD SG G
Sbjct: 177 SGMQLAYGHLEQAYEPDMSTEEAKTVAARGIKSAVERDTGSGNG 220
>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
Length = 203
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
V + K+ +A++RR+ ++ + + +++ +I + ++GL D+Q L + +
Sbjct: 4 VGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAEL 63
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKEL 131
+LY+L+ +M E A+L+S +L + ++ PY Q ++ G+ + P + ++D+ G +
Sbjct: 64 ELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTAPHVFSIDAAGG-SV 120
Query: 132 AKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT- 190
+ G+ +YG E+ + M DE + V +A+ ++ RD SG V ++T
Sbjct: 121 EDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 180
Query: 191 -------PT-EIKERILK 200
PT +I+ RI K
Sbjct: 181 KDGYVQLPTDQIESRIRK 198
>gi|448681225|ref|ZP_21691358.1| proteasome subunit beta [Haloarcula argentinensis DSM 12282]
gi|445767758|gb|EMA18851.1| proteasome subunit beta [Haloarcula argentinensis DSM 12282]
Length = 230
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + +N IA+DRR + + ++ Q++ +IH + L G +Q+ +
Sbjct: 35 GTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDS 125
L LY++R + + A+L R GPYF P++ G+ DE+ + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNF---ARGGPYFAINPIVGGV-DEEGSHVYSVDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G L D+ V G+ G E + P+M E + +A+ ++ +RD SG G
Sbjct: 151 AGGV-LEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLAIRAVNAAAERDTGSGNG 207
>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
Length = 256
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G+ IASD R+ L D ++ + + +GL D+ ++
Sbjct: 48 NGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSL 107
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + + + A ++S ++Y +RF PY ++AG+ K + D +
Sbjct: 108 LQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYDPV 167
Query: 127 GAKELAKDFVVAGTAGESLYGACE--------AMFKPDMEP----DELFETVSQALLSSV 174
G E + + V G++G+ L A + + PD P + L +
Sbjct: 168 GHMERCR-YRVLGSSGKMLLPALDHGLGWEHHTLVPPDQYPPLDKERALALARNCLRVAS 226
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
DRD +G G + ++T I+ L R D
Sbjct: 227 DRDLFTGDTGVLKLITKDGIETETLPLRKD 256
>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 225
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N V + G++ IASD R+ + + +I + + SG+ D + L
Sbjct: 24 EDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ K Y+ ++M E+ A ++S LY RF PY+ ++AG++ + K D
Sbjct: 84 DQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYD 143
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP---DELFETVSQALLSSVDRDCLSG 181
++G+ E K + +G+ E Y +++ K EP E + S+ +RD +G
Sbjct: 144 AVGSFEERK-YSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTG 202
Query: 182 WGGHVYIVTPTEIKERI 198
+ I+ I++ +
Sbjct: 203 DNVEIVILNSNGIRKEV 219
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + + +D R ++ + Q++ +I + + ++GL D+Q L + +
Sbjct: 7 GTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNYAAMTIAGLVGDAQVLVRYM 66
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+++ + M + A+L+S +L + +F PY Q ++ G + KP I ++D+ G
Sbjct: 67 KAEMELYRVQRKVSMPIDAAATLLSNMLNQTKFYPYMVQLLVGGY--DTKPHIFSIDAAG 124
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + G+ +YG EA ++ +M D+ V +A+ ++ RD SG +
Sbjct: 125 G-SVEDIYASTGSGSPFVYGVLEAEYQKNMSLDDGINLVIKAISAAKQRDSASGNMLQLG 183
Query: 188 IVTP 191
+V P
Sbjct: 184 VVDP 187
>gi|448685100|ref|ZP_21693110.1| proteasome subunit beta [Haloarcula japonica DSM 6131]
gi|445782303|gb|EMA33150.1| proteasome subunit beta [Haloarcula japonica DSM 6131]
Length = 230
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + +N IA+DRR + + ++ Q++ +IH + L G +Q+ +
Sbjct: 35 GTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDS 125
L LY++R + + A+L R GPYF P++ G+ DE+ + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNF---ARGGPYFAINPIVGGV-DEEGSHVYSVDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G L D+ V G+ G E + P+M E + +A+ ++ +RD SG G
Sbjct: 151 AGGV-LEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLAIRAVNAAAERDTGSGNG 207
>gi|448630993|ref|ZP_21673448.1| proteasome subunit beta [Haloarcula vallismortis ATCC 29715]
gi|445755367|gb|EMA06757.1| proteasome subunit beta [Haloarcula vallismortis ATCC 29715]
Length = 230
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + +N IA+DRR + + ++ Q++ +IH + L G +Q+ +
Sbjct: 35 GTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDS 125
L LY++R + + A+L R GPYF P++ G+ DE+ + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNF---ARGGPYFAINPIVGGV-DEEGSHVYSVDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G L D+ V G+ G E + P+M E + +A+ ++ +RD SG G
Sbjct: 151 AGGV-LEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLAIRAVNAAAERDTGSGNG 207
>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 226
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N V + G++ IASD R+ + + +I + + SG+ D + L
Sbjct: 25 EDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELT 84
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ K Y+ ++M E+ A ++S LY RF PY+ ++AG++ + K D
Sbjct: 85 DQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYD 144
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP---DELFETVSQALLSSVDRDCLSG 181
++G+ E K + +G+ E Y +++ K EP E + S+ +RD +G
Sbjct: 145 AVGSFEERK-YSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTG 203
Query: 182 WGGHVYIVTPTEIKERI 198
+ I+ I++ +
Sbjct: 204 DNVEIVILNSNGIRKEV 220
>gi|223647028|gb|ACN10272.1| Proteasome subunit beta type-6 precursor [Salmo salar]
gi|223672893|gb|ACN12628.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 202
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 39 FQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEK 98
++ ++HDR+F ++G D+Q + + F+ + ++ E + AS++ L Y
Sbjct: 33 INKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNN 92
Query: 99 R--FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPD 156
+ F + AG + P + T+ ++G L++ F + G+ +YG +A +KPD
Sbjct: 93 KEELQAGF---ITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPD 148
Query: 157 MEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKG 201
M +E + + AL ++ RD +SG H+ ++T ++ ++ G
Sbjct: 149 MSKEECLQFATNALALAMGRDNVSGGVAHLVVITEEGVEHVVIPG 193
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V V + +A++ R + + ++ +I D++ ++G + +Q+L L
Sbjct: 9 GTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDDKIGATIAGTVSHAQSLMDIL 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+LR E+DM + A L S +L + PY+ Q ++AG+ D+D + T+D G
Sbjct: 69 KAEISLYKLRNEKDMSIDALAVLTSNILKSR---PYYVQTILAGV-DKDGAKLYTLDPSG 124
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ + F G+ +G E + D+ +E + +A+ S+++RD SG +
Sbjct: 125 SY-IPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVYSGNNYRLG 183
Query: 188 IVTPTEIK 195
++T +K
Sbjct: 184 VITKDGMK 191
>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 255
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 1 MSITEY--NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLAT 58
MS Y NG ++A+ GK+ +A D R + ++ +++++ I +G A
Sbjct: 1 MSFNPYTQNGGTVLAIAGKDFCVVAGDTRQSEGFSIQSRYETKVWRLNEKATIAANGFAA 60
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D + L +R+ +R + Y+ ++M ++ A +V +LY KRF P++ +I G+ DE
Sbjct: 61 DCKQLVKRVKWRLETYKYAHNKEMPLKSIARMVQTMLYGKRFFPFYSYVIIGGIDDEGTG 120
Query: 119 FICTMDSIGAKELAKDFVVAGTAGESL 145
+ D +G+ E ++ A A +SL
Sbjct: 121 AVYGFDPVGSYE--RETCRAAGAAQSL 145
>gi|294655964|ref|XP_458199.2| DEHA2C12034p [Debaryomyces hansenii CBS767]
gi|199430751|emb|CAG86275.2| DEHA2C12034p [Debaryomyces hansenii CBS767]
Length = 217
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD ++++IHD ++ SG A D+Q +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTD--KLTQIHDTIYCCRSGSAADTQAVAD 76
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ + ++Y + + KP T A++ L Y + G + AG ++K + ++
Sbjct: 77 IVKYHLQVYSSQLPNNEKPTTKVAANVFQELCYNNKDG-LTAGIICAGYDKQNKGSVYSI 135
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
IG +D+ +AG+ +YG C +KP+ME D+ + + AL ++ D S G
Sbjct: 136 -PIGGSIHQQDYAIAGSGSTFIYGWCNENYKPEMEKDDCVQFIKTALSEAIKWDGSS--G 192
Query: 184 GHVYIVTPTE 193
G + +V TE
Sbjct: 193 GVIRMVILTE 202
>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
Length = 241
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + + +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRHESKVFDCGDNIVMSANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSVKWYHFDHNDKKLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A SL + + FK EP +E+ + V
Sbjct: 147 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQFEPGTNGKVRRPQTYLSIEEVIKLVR 204
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT +++ + + D
Sbjct: 205 DAFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|336254146|ref|YP_004597253.1| 20S proteasome subunits A and B [Halopiger xanaduensis SH-6]
gi|335338135|gb|AEH37374.1| 20S proteasome A and B subunits [Halopiger xanaduensis SH-6]
Length = 258
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 14/189 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
G+ V + G + +A+D R LG Q T T ++I + DR + SG +D+Q+
Sbjct: 46 TGTTTVGLAGTDGAVLAADARASLGGQFVTNKT-ARKIDPVDDRTAVAFSGSVSDAQSFV 104
Query: 65 QRLVFRHKLYQLREERDMKP--ETFASLVSALLYEKRFGPY-FCQPVIAGLSDEDKPFIC 121
+ L R +L Q ERD + ET A++ L+ R GPY V+AG+ DE P +
Sbjct: 105 RHL--RAELSQYDLERDGRASVETAATVAGDLV---RRGPYRILDLVLAGVDDE--PAVY 157
Query: 122 TMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
+ G + + +G+ + YGA EA ++P EL ++A+ S+ +RD SG
Sbjct: 158 QIGG-GGGVMRAPYAASGSGMQLAYGALEAAYEPGRSVAELRPIAARAVRSAAERDTASG 216
Query: 182 WGGHVYIVT 190
G + +T
Sbjct: 217 DGMTIATIT 225
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q L +
Sbjct: 7 TGTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + YQ R MK A+L+S +L E ++ PY Q +I G DE P + ++D++
Sbjct: 67 LEAEARYYQFTWGRPMKTRAMANLLSNILNENKWFPYMVQILIGGYVDE--PELASLDAL 124
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G + ++ G+ E ++ DM +E E +A+ ++ RD +G
Sbjct: 125 GGL-VFDEYTATGSGSPFAIAIIEDGYREDMSVEEAKELAVRAVRTAGKRDVYTG 178
>gi|333988299|ref|YP_004520906.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
SWAN-1]
gi|333826443|gb|AEG19105.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. SWAN-1]
Length = 207
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 7/187 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ A++RR + ++I KI D + ++G + +Q L + +
Sbjct: 9 GTTTVGLTCKDGIVFATERRATMGNLVAHKVAEKIFKIDDHIGATIAGSVSHAQVLMKYI 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+LR + E A+L + +L+ P + Q ++ G+ D P + ++D G
Sbjct: 69 SAEVALYRLRNGAIISVEAAATLTANILHSS---PLYVQTLLGGV-DNKGPSLYSLDPSG 124
Query: 128 AKELAKDFVVAGTAGESL-YGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
+ KD +++ +G + YG E + DM DE +T +A+ S+++RD SG G V
Sbjct: 125 G--VMKDMMISTGSGSPMAYGVLEDRYNEDMYVDEGIDTAIRAIKSAMERDTFSGNGILV 182
Query: 187 YIVTPTE 193
+T E
Sbjct: 183 ATITAEE 189
>gi|348576420|ref|XP_003473985.1| PREDICTED: proteasome subunit beta type-9-like [Cavia porcellus]
Length = 219
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H ++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVLGSDSRVSAGQAVVNRVFDKLSPLHKHIYCALSGSAADAQAMVD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 78 LAAYQLELHGMELEESPLVLAAANVVKNVSYKYRE-ELSAHLIVAGW--DQRAGGQVYGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
IG + F++ G+ ++G +A +KP M P+E + A+ +++RDC S GG
Sbjct: 135 IGGMLTRQPFIIGGSGSTYIHGYVDAAYKPGMSPEECRRFTTDAIALAMNRDCSS--GGV 192
Query: 186 VYIVTPTE--IKERILKGR 202
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVILGN 211
>gi|348541141|ref|XP_003458045.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 1 [Oreochromis niloticus]
Length = 217
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ ++A + I SD R + + +++ ++ ++HDR+F ++G D+Q + +
Sbjct: 15 TGTTILAAIFDGGVVIGSDSRASMGGEYVSSKTINKVIQVHDRIFCCMAGSLADAQAVIK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F + ++ E + AS++ L Y+ + F + AG ++ P + +
Sbjct: 75 AAKFHLSFHSVQMESPPQVIAAASVLKDLCYKNKDELQAGF---LTAGWDKKNGPQVYVV 131
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
S+G +++ + G+ +YG +A +KP+M +E + + AL ++ RD +SG
Sbjct: 132 -SLGGMLISQQVTIGGSGSTYIYGYVDAKYKPNMTKEECLQFATNALALAMGRDNVSGGV 190
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 191 AHLVVITEKGVEHVVVPG 208
>gi|344212556|ref|YP_004796876.1| proteasome subunit beta [Haloarcula hispanica ATCC 33960]
gi|343783911|gb|AEM57888.1| proteasome subunit beta [Haloarcula hispanica ATCC 33960]
Length = 230
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + +N IA+DRR + + ++ Q++ +IH + L G +Q+ +
Sbjct: 35 GTTTVGISTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAMTLVGSVGGAQSFIRS 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDS 125
L LY++R + + A+L R GPYF P++ G+ DE+ + ++D
Sbjct: 95 LRAEADLYEVRRDEPLSIHALATLAGNF---ARGGPYFAINPIVGGV-DEEGSHVYSVDP 150
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G L D+ V G+ G E + P+M E +A+ ++ +RD SG G
Sbjct: 151 AGGV-LEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARNLAIRAVNAAAERDTGSGNG 207
>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
++G +A+ G + +ASD RLG + R S + D IG G D++ L Q
Sbjct: 36 WHGGTCLAIAGDDFVLMASDTRLGEHGGIYTRELNRNSPVTDHCAIGQCGFQGDARVLLQ 95
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + ++Y+ + A+++S +LY KRF PY+ ++AGL + K + + D
Sbjct: 96 NVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVYNIVAGLDGDGKGSVFSYDP 155
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAM-----FKPDMEPDELFETVSQ----ALLSSVDR 176
+G+ + V G+A + + K D P E V Q A +S+ +R
Sbjct: 156 VGSYDQVP-MVCYGSAQNLIQPFLDNQIRRPHIKEDAAPKMTRERVRQLAIDAFISASER 214
Query: 177 DCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ +G G V ++ T + R D
Sbjct: 215 ETNTGDGITVTLIDKTGTTVETIPLRRD 242
>gi|440802447|gb|ELR23376.1| beta1 proteasome1D, putative [Acanthamoeba castellanii str. Neff]
Length = 217
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL--YQ 65
G++++A+V K+ + +D R +++ +HD+++ SG A D+Q + Y
Sbjct: 17 GTSIMAVVYKDGVVVGADSRTTTGAYIANRTSDKLTPVHDKIYCCRSGSAADTQAIADYV 76
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ +L EE ++ T A+L L Y + + +I G D+
Sbjct: 77 KWFLNQHSVELGEEPEVG--TAANLFKQLCYANK--NFIMAAIIVGGYDKHNGGSVYSIP 132
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + + + G+ +YG C+A +KP M DE V AL ++ RD SG
Sbjct: 133 LGGSLIKEPWAIGGSGSSYIYGYCDANYKPGMTKDEALAFVQNALSLAMSRDGSSGGVIR 192
Query: 186 VYIVTPTEIKERILKGR 202
+T ++ ++L G
Sbjct: 193 TVTITADGVERKMLPGN 209
>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 241
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R+ V I + ++ +I + D + + +G A D L
Sbjct: 27 NGGTVLGIAGEDFAVLAGDTRI-VSGYNIDSRYEPKIFDVGDNIVMTANGFAADGAALID 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ K Y+ + + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 86 QFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYD 145
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETV 166
+G+ E ++ AG A SL + + FK EP DE+ + V
Sbjct: 146 PVGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPGSDGTKKKELRYLKLDEVLQLV 203
Query: 167 SQALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
A S+ +R G G ++IVT +++
Sbjct: 204 KDAFSSATERHIYVGDGLEIFIVTKDGVRK 233
>gi|68005971|ref|XP_670208.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56485245|emb|CAI01353.1| hypothetical protein PB300168.00.0 [Plasmodium berghei]
Length = 58
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 162 LFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
LFETVSQ LLS++DRDCLSGWG VY++TP +I ++ LK RMD
Sbjct: 5 LFETVSQCLLSALDRDCLSGWGAEVYVLTPDKIIKKKLKARMD 47
>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
Length = 221
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N V + G++ +ASD R+ + + +I + + SG+ D + L
Sbjct: 20 EDNCGTCVVIKGEDFVVVASDTRMSRDYMILTRNDSKIYPLTSKCIFTGSGMRADMKELT 79
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ K Y+ ++M E+ A ++S LY RF PY+ ++AG++ + K D
Sbjct: 80 DQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYD 139
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP---DELFETVSQALLSSVDRDCLSG 181
++G+ E K + +G+ E Y +++ K EP E + S+ +RD +G
Sbjct: 140 AVGSFEERK-YSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTG 198
Query: 182 WGGHVYIVTPTEIKERI 198
+ I+ I++ +
Sbjct: 199 DNVEIVILNSKGIRKEV 215
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++ G+ V +V K+ +A+DRR + A + +I KI + L I +G D L
Sbjct: 4 KFKGTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLV 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L KLY + R+M A+L++ +L ++ PY ++ G ++K + ++D
Sbjct: 64 RLLRAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVGGY--DEKARLYSVD 121
Query: 125 SIGAKELAKD-FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
++G + +D ++ AG+ E Y +A + D+ E + +A+ +++ RD SG G
Sbjct: 122 AVGG--ITEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKAINTAIKRDVFSGDG 179
Query: 184 GHVYIVTPTE 193
+ +VT T+
Sbjct: 180 --ILVVTITK 187
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V K+ +A+DRR ++I I DR+ + +G D Q +Y +
Sbjct: 21 GTTTVGLVVKDAVILAADRRASAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQFIYNYM 80
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ + R + ++ A+ ++ +L + ++ PY Q ++ G + +P + +D +G
Sbjct: 81 KNIYHYNLISGNRPVTVKSLATYLTNILSQNKYFPYLVQILMGGY--DTQPRLFNLDYLG 138
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ +V G+ G E + PD+ D+ + ++A++S++ RD +G G V
Sbjct: 139 -DMTEETYVATGSGSPVAMGVLEDGYSPDLTGDQAMDLAARAVMSAIKRDSFTGTGVIVT 197
Query: 188 IVTPTEIKER 197
+T ER
Sbjct: 198 KITKEGHVER 207
>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
Length = 266
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 37/223 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + GK+ +A D R G + T I D + H L + + G
Sbjct: 40 NGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEDNEGGEGAH--LVLSVVGF 97
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D + L +RL K+Y+ R + M + A ++ +LY KRF PY+ ++AG+ +E
Sbjct: 98 AADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVHAILAGIDEEG 157
Query: 117 KPFICTMDSIGAKELAKDFVVAGTAGESLY------------------GACEAMFKPDME 158
K + + D +G+ E +++ A A SL G AM K E
Sbjct: 158 KGALYSYDPVGSYE--REYCRAAGAAASLIMPFLDNQVNFKNQFIPGSGEGNAMDKQPRE 215
Query: 159 P-----DELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
P D + V A S+V+R G G V ++T I+E
Sbjct: 216 PVPPPRDVALQLVKDAFTSAVERHIEVGDGLQVMVITTEGIQE 258
>gi|409723248|ref|ZP_11270548.1| proteasome beta subunit [Halococcus hamelinensis 100A6]
Length = 237
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A+DRR + ++I++IH R + +SG + +Q L L +LY+ R +
Sbjct: 57 LATDRRASAGNLVASKRAEKIAEIHPRGALTISGAVSAAQALINNLQAEVRLYEARRGEE 116
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTA 141
M + A+L S L F Y QP++ G+ D+D I ++ G + + + G+
Sbjct: 117 MSIKALATLTSNFLRSGAF--YIVQPILGGV-DDDGHHIYSIGP-GGSVMEEPYNATGSG 172
Query: 142 GESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
YG E F+ + +E + A+ S+V+RD SG G
Sbjct: 173 SPFAYGVLEQQFEEGLSNEEAKTVATDAVKSAVERDTASGNG 214
>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
Length = 242
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ IA D R + + ++ D + I +G A D L ++
Sbjct: 28 NGGTILGIAGEDFAVIAGDTRHTTGYSINSRNEPKVFDCGDNILISANGFAADGDALVKK 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y + M ++ A + LLY KR PY+ +IAGL ++ K + + D
Sbjct: 88 FKNNLKWYHFDHNNKKMTLKSAARNIQHLLYGKRMFPYYVHTIIAGLDEDGKGAVYSFDP 147
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A S+ + + FK EP DE+ E V
Sbjct: 148 VGSYE--REQCRAGGAAASIIMPFLDNQVNFKNQYEPDSKGTKPKSIRFLSLDEVIELVR 205
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
A S+ +R G + I+T +KE
Sbjct: 206 DAFTSATERHIHVGDSLQIMIITKEGVKE 234
>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
Length = 240
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 20/216 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ + D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFECEDNILISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
Y + + ++ A + LLY KR PY+ +IAGL +E K + + D +
Sbjct: 87 FKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSFDPV 146
Query: 127 GAKELAKDFVVAGTAGESL---YGACEAMFKPDMEPD---------------ELFETVSQ 168
G+ E ++ AG + SL + + K EPD E+ + V
Sbjct: 147 GSYE--REQCRAGGSAASLIMPFLDNQVNLKNQYEPDSNGTKRKEVKYLGVEEVIKLVRD 204
Query: 169 ALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT +++ + D
Sbjct: 205 AFTSATERHINVGDGLEILIVTKDGVRKEYFDLKRD 240
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS G+ V + G +A+++R+ I+ +++ KI D L + L+GL D
Sbjct: 1 MSYEYGTGATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADL 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q + + L + Y + R + A L++ +LY ++ P+ + ++ GL + +
Sbjct: 61 QAISKILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKL 120
Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLS 180
MD +G+ + D+ G+ G E + DM D+ + A+ ++++RD +S
Sbjct: 121 YVMDPLGSL-IEDDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMS 179
Query: 181 GWG 183
G G
Sbjct: 180 GDG 182
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
G+ V + K +A+D + LG ++T+ + ++I I DR+ I +G D Q L
Sbjct: 6 TGTTTVGIKVKEGVVLAADTQASLGNMVETL--NIRKILPITDRIAITTAGSVGDVQALA 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + + YQ R M A+L+S +L E ++ PY Q +I G DKP + ++D
Sbjct: 64 RMLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQIIIGGYV--DKPELASVD 121
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
++G K + G+ E ++ DM +E E +A+ ++ RD +G
Sbjct: 122 ALGGLVFEK-YTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVKTAGKRDVYTGERK 180
Query: 185 -HVYIVTPTEIKERILK 200
V ++T +KE ++
Sbjct: 181 VQVVVITKDGMKEEFVE 197
>gi|395738001|ref|XP_003777017.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pongo abelii]
Length = 205
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQ-RISKI-----HDRLFIGLSGLATDSQTLYQRL 67
M+ A R LG++ A Q R S D+ IG SG D TL + +
Sbjct: 1 MLSSTAMYSAPGRDLGMEPHRAAGPLQLRFSPYVFNGGTDKTVIGCSGFHGDCLTLTKII 60
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G
Sbjct: 61 EARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 120
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQAL 170
+ + +D AG G+ AM +P ++ D V
Sbjct: 121 SYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 171
Query: 171 LSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+S+ +RD +G + IVT I+E + R D
Sbjct: 172 ISAAERDVYTGDALRICIVTKEGIREETVPLRKD 205
>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
Length = 241
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + F+ ++ D + I +G A D + L Q
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRFEPKVFDCGDNIVISANGFAADGEALVQ 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + ++ A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 86 RFKNSIKWYHFDHNDKKLTMKSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFD 145
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETV 166
+G+ E ++ AG A SL + + FK P DE + V
Sbjct: 146 PVGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYVPESNGKVKRPLKYLTIDECIKLV 203
Query: 167 SQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT +++ + D
Sbjct: 204 RDAFTSATERHIQVGDGLEILIVTKDGVRKEYFDLKRD 241
>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ + D + I +G A DS L +R
Sbjct: 36 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRSESKVFDVGDGIVISANGFAADSTALVKR 95
Query: 67 LVFRHKLYQLRE-ERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y E E+ + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 96 FRNSLKWYHFNENEKRLSLSAAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 155
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP-------------DELFETVSQA 169
+G+ E ++ AG A SL + + FK P +E+ + V +
Sbjct: 156 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYVPGTGEKRPITYLSVEEVVKLVRDS 213
Query: 170 LLSSVDRDCLSGWGGHVYIVTPTEIK 195
S+ +R G G + IVT ++
Sbjct: 214 FTSATERHIHVGDGLEILIVTKDGVR 239
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
G+ V + K+ +A+D + LG ++T+ + ++I I DR+ I +G D Q L
Sbjct: 6 TGTTTVGIKVKDGVVLAADTQASLGNMVETL--NIRKILPITDRIAITTAGSVGDVQALA 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + + YQ R M A+L+S +L E ++ PY Q +I G DKP + ++D
Sbjct: 64 RMLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQILIGGYV--DKPELASVD 121
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
++G K + G+ E ++ DM +E E +A+ ++ RD +G
Sbjct: 122 ALGGLVFEK-YTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVRTAGKRDVYTGERK 180
Query: 185 -HVYIVTPTEIKERILK 200
V ++T +KE ++
Sbjct: 181 VQVVVITKDGMKEEFVE 197
>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
Length = 200
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 16 GKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQ 75
++ +A+D + + + ++I I DR+ I +G D Q L + L + YQ
Sbjct: 15 ARDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARYYQ 74
Query: 76 LREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDF 135
R M + A+L+S +L E ++ PY Q +I G +E P + +D +G + D+
Sbjct: 75 FTWNRPMSTKAMANLLSNILNENKWFPYLVQIIIGGYVEE--PTLANLDPMGGL-IFDDY 131
Query: 136 VVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG-HVYIVTPTEI 194
G+ E FK DM E E +A+ ++ RD +G V ++T +
Sbjct: 132 TATGSGSPFAIAVLEDGFKKDMSVKEARELAIRAVRTAGKRDVYTGSRKVQVVVITKDGM 191
Query: 195 KERILK 200
KE ++
Sbjct: 192 KEEFVE 197
>gi|209878736|ref|XP_002140809.1| proteasome subunit beta type 6 precursor [Cryptosporidium muris
RN66]
gi|209556415|gb|EEA06460.1| proteasome subunit beta type 6 precursor, putative [Cryptosporidium
muris RN66]
Length = 213
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ- 65
G+ LVA+ ++ +A+D R + ++ ++I++I D++FI SG A+D+QT+ Q
Sbjct: 15 TGTTLVALKCRDGLILAADSRTSMGNMVVSRSARKITRITDKIFICRSGSASDTQTIVQY 74
Query: 66 --RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+L H+L +L EE +K + ASL + Y+ + Y +I D F
Sbjct: 75 VRKLTADHEL-ELGEEARVK--SVASLARIICYQNK--EYLTAGLIVAGVDPYDGFKIFQ 129
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
++G + K + ++G+ +Y +A + +M+ DE + + + ++ RD SG
Sbjct: 130 IALGGSMIEKSYALSGSGSAYIYSLLDATYHTNMDIDECKDFARRLVSHAIFRDSSSGGL 189
Query: 184 GHVYIVTPTEIKERILKG 201
+ I+T +E ++ G
Sbjct: 190 IRMVIITKEGYQELVIPG 207
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ V M K+ +A+D++ L + ++I ++ + I ++GL D+QTL
Sbjct: 29 YRGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAITIAGLVADAQTLAD 88
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ Y R M + ASL+ +L E ++ P+ Q ++ G + + ++D
Sbjct: 89 YIRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGYDYYEGAKLFSIDY 148
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGG 184
G + + G+ G E+ ++P+M D+ V +A+ ++ RD SG G
Sbjct: 149 FG-DVTEERYTATGSGSPIAIGVIESGYRPEMSIDDAVSLVVKAVATASMRDVFSGGIG 206
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ V ++ K+ +A+DRR ++I KI D++ + +GL D+Q L
Sbjct: 18 HGTTTVGLIAKDAVILAADRRATAGTFIAHRKTRKILKITDKMALTTAGLVADAQVLADW 77
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + + +++ + A L+S LLY + P++ Q ++ G + P + ++D
Sbjct: 78 LNTQMNYLTITKKQPVTVREAAHLLSLLLYRYKLFPFYVQLILGGY--DTAPRLFSLDLY 135
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G+ + + + G+ G E ++ +M P+E + +A+ ++ RD +G G
Sbjct: 136 GSL-VEEKYTSTGSGSPIAIGVLEDGYRENMSPEEARKLAVKAVQMALKRDSATGDGVDS 194
Query: 187 YIVTPTEIKE 196
I+T IKE
Sbjct: 195 VIITSEGIKE 204
>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
Length = 245
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 107 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 166
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E
Sbjct: 167 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 216
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 3/175 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + K +A+D + + + ++I I DR+ I +G D Q L +
Sbjct: 5 TGTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARM 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + YQ R M + A L+S +L E ++ PY Q +I G +E P + +D +
Sbjct: 65 LEAEARYYQFTWGRPMTAKAMAHLLSNILNENKWFPYMVQIIIGGYVEE--PTLANLDPL 122
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G + D+ G+ E F+ DM +E E +A+ ++ RD +G
Sbjct: 123 GGL-IFDDYTATGSGSPFAIAVLEDGFRKDMSLEEAKELAVRAVRTAGKRDVYTG 176
>gi|328869271|gb|EGG17649.1| proteasome subunit beta type 6 [Dictyostelium fasciculatum]
Length = 214
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 40 QRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKP--ETFASLVSALLYE 97
+I+ IH++++ SG A D+Q + + R+ L +E D +P +T ASL L Y
Sbjct: 46 NKITPIHEKIYCCRSGSAADTQAISDYV--RYYLEMHTQELDDQPVVKTAASLFQLLCYN 103
Query: 98 KRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
+ ++AG D+DK S+G + + F ++G+ LYG C+A FKP M
Sbjct: 104 NK-NNLMAGIIVAGW-DKDKGGSVYNISLGGSMIKQPFAMSGSGSTYLYGHCDAQFKPGM 161
Query: 158 EPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGR 202
+E + V AL ++ RD SG + I+ ++ R + G
Sbjct: 162 TKEECVKFVQNALALAMFRDGSSGGVIRLCIIDKENVERRTIPGN 206
>gi|150864238|ref|XP_001382979.2| hypothetical protein PICST_41720 [Scheffersomyces stipitis CBS
6054]
gi|149385494|gb|ABN64950.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD ++++IHD ++ SG A D+Q +
Sbjct: 19 GTSIMAVKFKDGVILGADSRTTTGSYIANRVTD--KLTQIHDTIYCCRSGSAADTQAVAD 76
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ + ++Y + D KP T A++ L Y + + AG ++K + ++
Sbjct: 77 IVKYYLQIYASQLPNDEKPTTQVAANVFQELCYNNK-DNLTAGIICAGYDKKNKGSVYSI 135
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
IG +D+ +AG+ +YG C FK DME DE E + AL ++ D S G
Sbjct: 136 -PIGGSIHKQDYAIAGSGSTFIYGWCNEHFKHDMEQDETVEFIKTALSEAIKWDGSS--G 192
Query: 184 GHVYIVTPTE 193
G + +V TE
Sbjct: 193 GVIRMVVLTE 202
>gi|366989313|ref|XP_003674424.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
gi|342300287|emb|CCC68046.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
Length = 241
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSLKWYHFDHNDKKLAMSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A SL + + FK EP +E + V
Sbjct: 147 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPGTDGKVKRPLKYLTIEEAIKLVR 204
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT +++ + + D
Sbjct: 205 DAFTSATERHIHVGDGLEILIVTKDGVRKEFFELKRD 241
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 1/177 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D+R + + +++ I + + + ++G D+Q+L + +
Sbjct: 10 GTTTVGIACADGVVLATDKRATMGNLIADKEAKKLYPIDEYIAMTIAGSVGDAQSLVRII 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSI 126
K+Y++R +M P +L+S +L+ R P Q ++ G D+P + ++D++
Sbjct: 70 SAETKIYKMRTGNNMSPLACTTLMSNVLHGNRHFPLMNQLIVGGYDVCNDEPQLYSLDAV 129
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
G F G+ + YG EA + ++ + +A+ S++ RD SG G
Sbjct: 130 GGINEETTFTSTGSGSPTAYGVLEAEYVNKLKTSAALKLAVKAISSAMKRDAYSGNG 186
>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 12/209 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKGFVILAGDTRLNGDYCLHCRHDQSKIFQLTPYTYMASNGMQADRVQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S +LY +RF PY+ +I GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMIVGLDEEGNGVCYSYD 159
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSVD 175
++G+ E + G+A L + + P+M +E + A + +
Sbjct: 160 AVGSTEPFL-YGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFTGAAE 218
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G +I+T ++ + R D
Sbjct: 219 RDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V+ +I + +Q ++ + D + + +G A D L
Sbjct: 28 NGGTVLGIAGEDFAVLAGDTRQ-VEGYSIQSRYQPKVFNVGDDIVMTANGFAADGAALID 86
Query: 66 RLVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R + + Y+ + + ++ A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 RFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYD 146
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETV 166
+G+ E ++ AG A SL + + FK EP DE+ E V
Sbjct: 147 PVGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPGSDGKKKRELRYLTLDEVLELV 204
Query: 167 SQALLSSVDRDCLSGWGGHVYIVTPTEIK 195
A S+ +R G G + IVT ++
Sbjct: 205 RDAFSSATERHIQVGDGLEILIVTKEGVR 233
>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
Length = 238
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG V + G + IASD RL ++ + +I ++ +G G D T +
Sbjct: 33 NGGTTVGIAGSDFVVIASDTRLASSYDILSRNVPKIFELGSGCVLGSCGCWCDVLTFIRV 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ K Y +++ A ++S LY +RF PY+ V+AGL ++ + I T D +
Sbjct: 93 AESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNVLAGLDEKGQGVIYTYDPV 152
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSVDRD 177
G E K GT+ E + + + + D+ DE + +S+ +R
Sbjct: 153 GHCEKVK-MSCGGTSMELIQPILDNIVEKKNMTNGTMKDLSIDETVNIIHDCFISAAERQ 211
Query: 178 CLSGWGGHVYIVTPTEIKERILKGRMD 204
+G G I+T I+ + + R D
Sbjct: 212 IQTGDGIMFKIITKEGIETKSVGLRRD 238
>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
V +V + +A+D+R ++I +I D + + +SGL D++ + ++ F
Sbjct: 13 VGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDYIAMTISGLVADAEIIAEQARFIA 72
Query: 72 KLYQLREERDMKPETFASLVSALLYEK-RFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 130
+ Y+L R +K AS +S +L R PY Q ++ G D++ P + +D G+
Sbjct: 73 RKYKLELGRPIKVSALASNLSIILNAYLRMSPYIVQLLLGGY-DDNGPHLFYIDLFGSLS 131
Query: 131 LAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVT 190
K ++ G+ + +G E ++ D+ DE E +A+ ++ RD SG G + ++
Sbjct: 132 EEK-YMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAATKRDGFSGEGVDIVVIG 190
Query: 191 PT 192
P
Sbjct: 191 PN 192
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ A+ K+ +A+D R L +I K+ L + ++G D+Q L +
Sbjct: 19 GTTTCALTCKDGVVLAADTRASAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNLVDTM 78
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ LY+ + + M ++ A L S +L+ +R+ PY+ Q ++AG + + I +D G
Sbjct: 79 RYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEGSQIHNIDLFG 138
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQ 168
+ K F+ G+ YG E+ ++ M ++ ++ Q
Sbjct: 139 SMTTEK-FISTGSGSPVAYGYLESEYRDGMSVNDAYKVAMQ 178
>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAILAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + ++ A + LLY KRF PY+ +IAGL + K + + D
Sbjct: 87 FKNSLKWYHFDHNDKKLSMKSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFDP 146
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A SL + + FK EP DE+ + V
Sbjct: 147 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQFEPGTDGKVKKPLKYLSIDEVIKLVR 204
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ S+ +R G G + IVT +++ + + D
Sbjct: 205 DSFTSATERHIHVGDGLEILIVTKDGVRKEFYELKRD 241
>gi|448706042|ref|ZP_21700886.1| proteasome endopeptidase complex subunit beta [Halobiforma
nitratireducens JCM 10879]
gi|445794984|gb|EMA45521.1| proteasome endopeptidase complex subunit beta [Halobiforma
nitratireducens JCM 10879]
Length = 242
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 17 KNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQ 75
++ IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+
Sbjct: 56 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYE 115
Query: 76 LREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKD 134
R DM E A+L R GP+F P++ G+ DED + ++D G + D
Sbjct: 116 SRRGEDMSIEALANLAGNF---ARGGPFFAIHPILGGV-DEDGSHVYSIDPAGGV-MEDD 170
Query: 135 FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ V G+ + YG E ++ D+ DE ++++ S+ +RD SG G
Sbjct: 171 YTVTGSGMQLAYGHLEQSYEDDLTNDEATTIAARSIKSAAERDTGSGNG 219
>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
Length = 258
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIAT--DFQRISKIHDRLFIGLSGLATDSQTLY 64
NG + A+ G++ + +D RL I T D ++ ++ DR+F+ SG+ D L
Sbjct: 51 NGGTIAAIAGRDFAILGADTRLNGDF-CIHTRMDTSKLFQLTDRVFLASSGMQADRLQLQ 109
Query: 65 QRLVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L +R + Y+ + + A LVS +LY++RF PY+ +I GL ++ +
Sbjct: 110 RMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLYQRRFFPYYTFNMIVGLDEQGAGVCYSY 169
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSV 174
D++G+ E ++ + G+A + + + P++ +E+ + A +
Sbjct: 170 DAVGSTEPSR-YGTCGSASSFVEPLMDCLLTRQHMVTSVPPELSVEEVLGMMKDAFTGAA 228
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G +++T I+ + + R D
Sbjct: 229 ERDIFTGDSVCFHVITAEGIRTEMFELRKD 258
>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
Length = 247
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK+ +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S LLY +RF PY+ ++ GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGRVPPTKAIAQLMSTLLYHRRFFPYYTFNMVVGLDEEGHGVCYSYD 159
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSVD 175
++G+ E + G+A L + + P+M +E + A + +
Sbjct: 160 AVGSTEPFL-YGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFTGAAE 218
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G +I+T ++ + R D
Sbjct: 219 RDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|448328326|ref|ZP_21517639.1| proteasome endopeptidase complex, beta subunit [Natrinema
versiforme JCM 10478]
gi|445616132|gb|ELY69764.1| proteasome endopeptidase complex, beta subunit [Natrinema
versiforme JCM 10478]
Length = 243
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+ R
Sbjct: 62 IATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEARRGE 121
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
M + A+L R GP+F P++ G+ DE+ + ++D G + D+ V G
Sbjct: 122 GMSIDALATLAGNF---ARGGPFFAIHPILGGV-DEEGSHVYSIDPAGGV-MEDDYTVTG 176
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ + YG E ++PDM +E ++ + S+V+RD SG G
Sbjct: 177 SGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNG 220
>gi|83816981|ref|NP_001033050.1| proteasome subunit beta type-9 [Sus scrofa]
gi|311260176|ref|XP_003128374.1| PREDICTED: proteasome subunit beta type-9-like [Sus scrofa]
gi|83320492|gb|ABC02872.1| proteasome beta 9 subunit [Sus scrofa]
gi|84514209|gb|ABC59113.1| proteasome beta 9 subunit [Sus scrofa]
gi|110276961|gb|ABG57117.1| proteasome beta 9 subunit [Sus scrofa]
gi|147225182|emb|CAN13314.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Sus scrofa]
Length = 219
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHHRIYCALSGSAADAQAIAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGMELEEPPLVLAAANVVRNISYKYRE-DLSAHLMVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG +A +KP M P+E + A+ +++RD S GG
Sbjct: 135 MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMNRDGSS--GGV 192
Query: 186 VYIVTPTE--IKERILKGR 202
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVILGN 211
>gi|374724463|gb|EHR76543.1| proteasome, beta component (T1A subfamily) [uncultured marine group
II euryarchaeote]
Length = 208
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Query: 40 QRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
Q++ KI D L + +GL +Q+L + L L+QLR ++ M + A+ + +L +
Sbjct: 45 QKLFKIGDNLALTTAGLVGHAQSLSRTLAAEVSLFQLRRQQQMTVKGAATFTANILAGR- 103
Query: 100 FGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP 159
P++ Q +I G+ DE + ++DS G + + G+ +YG E F M
Sbjct: 104 --PHWVQLLIVGVDDEGG-HVYSIDSAGG-SIPDSYCATGSGSPYMYGVLEDGFSEGMTR 159
Query: 160 DELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ + ++AL +S RD SG G + ++T + I +G +D
Sbjct: 160 TDALKLAARALHASGQRDAASGNGMDLAVITAKDGYVAITQGEID 204
>gi|66827667|ref|XP_647188.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
gi|74897489|sp|Q55GJ6.1|PSB6_DICDI RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Differentiation-associated proteasome subunit 1;
Short=DAPS-1; Flags: Precursor
gi|60475212|gb|EAL73147.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
Length = 214
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 40 QRISKIHDRLFIGLSGLATDSQTL--YQRLVFRHKLYQLREERDMKPETFASLVSALLYE 97
+I+ IH+R++ SG A D+Q + Y R +L +E D+K T ASL L Y
Sbjct: 46 NKITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVK--TAASLFQLLCYS 103
Query: 98 KRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
+ ++AG + + S+G + + F + G+ +YG C++ FKP M
Sbjct: 104 NK-NNLMAGIIVAGWDKHQGGSVYNI-SLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKM 161
Query: 158 EPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGR 202
DE E V +L ++ RD SG + I+ ++ +++ G
Sbjct: 162 TKDECIEFVQNSLALAMFRDGSSGGVIRLCIIDKNGVERKMIPGN 206
>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G++ A+D R+ + + ++ ++ + + +G D+ TL +
Sbjct: 34 NGGTVMAVAGEDYVICAADTRMSTGYSIMTRQYTKVDEMSPKTLMASAGFMADAATLKKL 93
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R YQ + + FA ++S LY +RF PY+ ++AGL E K + T D++
Sbjct: 94 LKGRCDQYQFANNKPIGCVAFAQMLSNTLYMRRFFPYYAFNIVAGLDAEGKGAVFTYDAV 153
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSV 174
G+ E S G+ + + P + D +TVS +L +V
Sbjct: 154 GSYERTN---------YSCQGSGQQLIMPVL--DNQLKTVSPLVLPAV 190
>gi|308321308|gb|ADO27806.1| proteasome subunit beta type-9-a like protein [Ictalurus furcatus]
Length = 214
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ +VA+ I SD R + +++ ++ ++ DR+F ++G D+Q + +
Sbjct: 12 TGTTIVAVKYNGGVIIGSDSRASIGGSYVSSKVINKLIQVRDRIFCCIAGSLADAQHVTR 71
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
F+ + ++ + A+++ L Y R F + AG + P + T+
Sbjct: 72 VAKFQLSFHSIQMGSPPLVKAAATVLKELCYSNREDLQAGF---ITAGWDKKKGPQMYTV 128
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
S+G +++ F + G+ +YG +A +KPDM +E + V AL ++ RD +SG
Sbjct: 129 -SMGGMLISQPFTIGGSGSTYIYGYMDAKYKPDMSREECIQFVKNALALAIGRDNVSGGI 187
Query: 184 GHVYIVTPTEIKERILKG 201
H+ ++T ++ ++ G
Sbjct: 188 AHLVVITEGGVEHVVVPG 205
>gi|452207602|ref|YP_007487724.1| proteasome beta subunit [Natronomonas moolapensis 8.8.11]
gi|452083702|emb|CCQ37016.1| proteasome beta subunit [Natronomonas moolapensis 8.8.11]
Length = 239
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ + L LY+ R
Sbjct: 58 IATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFIRTLRAEVDLYETRRGE 117
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
D+ A+L R GP+F P++ G+ DE+ + ++D G +A D+ V G
Sbjct: 118 DISISALATLAGNF---ARGGPFFAINPILGGV-DEEGHHVYSIDPAGGV-MADDYTVTG 172
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 193
+ +G E ++ DM DE + A+ ++V+RD SG G VY+ T T+
Sbjct: 173 SGLMVAHGTLEEGYEDDMTNDEAKRVAASAIKAAVERDTGSGNG--VYLATITD 224
>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
Length = 181
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 19 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 78
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K
Sbjct: 79 IIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 130
>gi|448345261|ref|ZP_21534158.1| proteasome endopeptidase complex, beta subunit [Natrinema altunense
JCM 12890]
gi|445635259|gb|ELY88429.1| proteasome endopeptidase complex, beta subunit [Natrinema altunense
JCM 12890]
Length = 243
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+ R
Sbjct: 62 IATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEARRGE 121
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
M + A+L R GP+F P++ G+ DE + ++D G + D+ V G
Sbjct: 122 GMSIDALATLAGNF---ARGGPFFAIHPILGGVDDEGS-HVYSIDPAGGV-MEDDYTVTG 176
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ + YG E ++PDM +E ++ + S+V+RD SG G
Sbjct: 177 SGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNG 220
>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
6242]
gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
6242]
Length = 210
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +A+++R + + ++I +I D + + +G D+Q + + +
Sbjct: 9 GTTTVGIVCTDGVVLATEQRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRII 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KL+++R + + + +L+S +L +R+ P Q +I G+ D++ P I ++D++G
Sbjct: 69 SVESKLFKMRRQESITIKGITTLLSNMLSGQRYYPLMVQLLIGGV-DKNGPAIYSLDALG 127
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
V G+ YG E + DM E + +AL +++ RD SG V
Sbjct: 128 GNIEETRAVSTGSGSPMAYGVLEDRYTEDMTVVEGVDLAIRALHNAMKRDSASGENIDVV 187
Query: 188 IVT 190
++T
Sbjct: 188 VIT 190
>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 258
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG + A+ G N + +D RL G +D ++ K+ DR+F+ SG+ D L Q
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
L +R + YQ + P T A L S +LY++RF PY+ +I G+ ++ +
Sbjct: 111 MLKYRIQWYQYNNGGKV-PSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSY 169
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSV 174
D +G+ E + + G+A + + + D+ +E + A +
Sbjct: 170 DPVGSTEPFR-YGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAA 228
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G +IVT + + + R D
Sbjct: 229 ERDIFTGDTVCFHIVTADGVGTEMFELRKD 258
>gi|50556048|ref|XP_505432.1| YALI0F14861p [Yarrowia lipolytica]
gi|49651302|emb|CAG78241.1| YALI0F14861p [Yarrowia lipolytica CLIB122]
Length = 217
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD +++++HD+++ SG A D+Q +
Sbjct: 19 GTSIMAVKFKDGVVLGADSRTTTGAFIANRVTD--KLTQVHDKIWCCRSGSAADTQAVAD 76
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + + Y + ++D + AS+ L Y + ++AG D++ + ++
Sbjct: 77 IVTYHLQSYAAQNDKDPSTKVAASMFQELCYNNK-DNLTAGIIVAGYDDKNGGEVYSI-P 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G +D+ +AG+ +YG C+ FK DM DE + +L ++ D SG
Sbjct: 135 LGGSLHKQDYAIAGSGSTYIYGLCQKNFKQDMTKDECVLFIKNSLAQAIKWDGSSGGVIR 194
Query: 186 VYIVTPTEIKERIL 199
+ I+T + +I
Sbjct: 195 ICILTKDGAERQIF 208
>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA+ G+N +ASD RL + + + D+ + G D TL +
Sbjct: 32 NGGTVVAVAGENFAVVASDTRLSEYYGIHTRNCPKTFVLSDKTVLASCGFHGDVLTLTKN 91
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R + Y+ + E+ M A ++S LY +RF P++ VI GL + K + + D +
Sbjct: 92 IFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYTYNVIGGLDESGKGAVYSYDPV 151
Query: 127 GAKELAKDFVVAGTA 141
G+ E + + AGTA
Sbjct: 152 GSYE-RESYRAAGTA 165
>gi|146416491|ref|XP_001484215.1| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
6260]
Length = 217
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD ++++IHD ++ SG A D+Q +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGSYIANRVTD--KLTQIHDTIYCCRSGSAADTQAIAD 76
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ + ++Y + D KP T A++ L Y+ + +I DE +
Sbjct: 77 IVKYYMQIYTSQLPHDEKPTTQIAANIFQELCYKNK--DNLTAGIICAGYDEKNKGTVYL 134
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
IG +++ +AG+ +YG C +K DME DE + AL ++ D SG
Sbjct: 135 IPIGGSIHQQEYAIAGSGSTFIYGWCNENYKKDMEKDECVSFIKTALSEAIKWDGSSGGV 194
Query: 184 GHVYIVTPTEIKERIL 199
+ ++T ++ +I
Sbjct: 195 IRMVVLTADGVERKIF 210
>gi|294889671|ref|XP_002772914.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
gi|239877494|gb|EER04730.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
Length = 204
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ ++AM K+ + +D R ++++++HDR+F+ SG A D+Q L
Sbjct: 5 YTGTTIMAMKFKDGVVLGADSRTSTGGYVANRVSRKVTRLHDRIFVCRSGSAADTQFLSS 64
Query: 66 RLVF--RHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP-VIAGLSDEDKPFICT 122
++ + L +R K +T A+L+ L Y + Y ++AG + P + +
Sbjct: 65 KVKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNK--QYLTAGLIVAGWDQTEGPQVYS 122
Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGW 182
+ +G + ++ G+ + G + +++PDM +E + V++A+ ++ RD SG
Sbjct: 123 I-PLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMARDGSSGG 181
Query: 183 GGHVYIVTPTEIKERIL 199
V VT ++ E+ L
Sbjct: 182 VIRVTTVTEKDVAEKCL 198
>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
Length = 247
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK+ +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S +LY +RF PY+ ++ GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGVCYSYD 159
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSVD 175
++G+ E + G+A L + + P+M +E + A + +
Sbjct: 160 AVGSTEPFL-YGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLALLKNAFTGAAE 218
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G +I+T ++ + R D
Sbjct: 219 RDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|357463621|ref|XP_003602092.1| Proteasome subunit beta type [Medicago truncatula]
gi|355491140|gb|AES72343.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +A + K +A+D R + + ++I +I+ + ++G A D Q ++ L
Sbjct: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +L++L +R + + L++ +LY R +IAG DE P + +DS G
Sbjct: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEG 172
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ F V G+ YG ++ +K DM +E E +A+ + RD SG VY
Sbjct: 173 GRLKGNRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVY 231
Query: 188 IVTPTEIKE 196
V PT K+
Sbjct: 232 YVGPTGWKK 240
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q L +
Sbjct: 5 TGTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPITDRIAITTAGSVGDVQMLARY 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + Y R M + A+L+S +L E R+ PY Q +I G DE P I +D
Sbjct: 65 LEAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQIIIGGYVDE--PTIANLDPF 122
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + D+ G+ E ++ D+ +E E +A+ ++ RD +G V
Sbjct: 123 GGL-IFDDYTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAVRAAGRRDVYTG-SKKV 180
Query: 187 YIVTPTE 193
+VT T+
Sbjct: 181 QVVTITK 187
>gi|397775022|ref|YP_006542568.1| proteasome endopeptidase complex, beta subunit [Natrinema sp. J7-2]
gi|448343846|ref|ZP_21532763.1| proteasome endopeptidase complex, beta subunit [Natrinema gari JCM
14663]
gi|397684115|gb|AFO58492.1| proteasome endopeptidase complex, beta subunit [Natrinema sp. J7-2]
gi|445621929|gb|ELY75394.1| proteasome endopeptidase complex, beta subunit [Natrinema gari JCM
14663]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+ R
Sbjct: 62 IATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEARRGE 121
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
M + A+L R GP+F P++ G+ DE + ++D G + D+ V G
Sbjct: 122 RMNIDALATLAGNF---ARGGPFFAIHPILGGVDDEGS-HVYSIDPAGGV-MEDDYTVTG 176
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ + YG E ++PDM +E ++ + S+V+RD SG G
Sbjct: 177 SGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNG 220
>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
Length = 242
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + +I + D + + +G A D L R
Sbjct: 28 NGGTVLGIAGEDFSVLAGDTRQVVGYSINSRYEPKIFDVGDDIAMTANGFAADGAALIDR 87
Query: 67 LVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ K Y+ + + ++ A + LLY KRF PY+ +IAGL DE K + + D
Sbjct: 88 FRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGKGAVYSYDP 147
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A SL + + FK P DE+ + V
Sbjct: 148 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQFVPGTNGTEKKELRYLSLDEVLQLVK 205
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
A S+ +R G G ++I+T I++
Sbjct: 206 DAFSSATERHIYVGDGLEIFIITKDGIRK 234
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
K+ +A+D R+ +++ + + I ++G D+QTL + YQ+
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFV 136
+ M A L S+L++ R+ P++ Q ++AG+ D + P + +D G+ K +
Sbjct: 82 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGV-DNEGPHLYNLDPFGSVTEEK-LI 139
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G+ YG E ++ DM+ + E QA+ +++ RD SG
Sbjct: 140 ATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSG 184
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
K+ +A+D R+ +++ + + I ++G D+QTL + YQ+
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFV 136
+ M A L S+L++ R+ P++ Q ++AG+ D + P + +D G+ K +
Sbjct: 82 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGV-DNEGPHLYNLDPFGSVTEEK-LI 139
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G+ YG E ++ DM+ + E QA+ +++ RD SG
Sbjct: 140 ATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSG 184
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
K+ +A+D R+ +++ + + I ++G D+QTL + YQ+
Sbjct: 25 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 84
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFV 136
+ M A L S+L++ R+ P++ Q ++AG+ D + P + +D G+ K +
Sbjct: 85 MRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGV-DNEGPHLYNLDPFGSVTEEK-LI 142
Query: 137 VAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G+ YG E ++ DM+ + E QA+ +++ RD SG
Sbjct: 143 ATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSG 187
>gi|388492526|gb|AFK34329.1| unknown [Medicago truncatula]
Length = 271
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +A + K +A+D R + + ++I +I+ + ++G A D Q ++ L
Sbjct: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSHSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +L++L +R + + L++ +LY R +IAG DE P + +DS G
Sbjct: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW-DETGPGLYYVDSEG 172
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ F V G+ YG ++ +K DM +E E +A+ + RD SG VY
Sbjct: 173 GRLKGNRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVY 231
Query: 188 IVTPTEIKE 196
V PT K+
Sbjct: 232 YVGPTGWKK 240
>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
Length = 174
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 26/178 (14%)
Query: 44 KIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPY 103
K+ D IG SG D TL L R K+Y+ + M A+++S +LY +RF PY
Sbjct: 6 KLTDTTVIGCSGFHGDCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPY 65
Query: 104 FCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP---- 159
+ +I GL +E K + + D +G+ + +D AG G+ AM +P ++
Sbjct: 66 YVYNIIGGLDEEGKGAVYSFDPVGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGL 116
Query: 160 -------------DELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
++ + V +S+ +RD +G I+T IKE R D
Sbjct: 117 KNMQGARQLPLSLEKALQLVKDVFISAAERDVYTGDALETCIITKDGIKEESFPLRRD 174
>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
Length = 247
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK+ +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S +LY +RF PY+ ++ GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGRVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGVCYSYD 159
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSVD 175
++G+ E + G+A L + + P+M +E + A + +
Sbjct: 160 AVGSTEPFL-YGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFTGAAE 218
Query: 176 RDCLSGWGGHVYIVTPTEIKERILKGRMD 204
RD +G +I+T ++ + R D
Sbjct: 219 RDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|190347256|gb|EDK39498.2| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
6260]
Length = 217
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G++++A+ K+ + +D R G + TD ++++IHD ++ SG A D+Q +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGSYIANRVTD--KLTQIHDTIYCCRSGSAADTQAIAD 76
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ + ++Y + D KP T A++ L Y+ + + AG +++K + ++
Sbjct: 77 IVKYYMQIYTSQLPHDEKPTTQIAANIFQELCYKNK-DNLTAGIICAGYDEKNKGTVYSI 135
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
IG +++ +AG+ +YG C +K DME DE + AL ++ D SG
Sbjct: 136 -PIGGSIHQQEYAIAGSGSTFIYGWCNENYKKDMEKDECVSFIKTALSEAIKWDGSSGGV 194
Query: 184 GHVYIVTPTEIKERIL 199
+ ++T ++ +I
Sbjct: 195 IRMVVLTADGVERKIF 210
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG +++A+ G + IA D R G +QT ++ ++ D+ + +G A D++ L
Sbjct: 13 NGGSIMAIHGDDYCVIAGDTRQSEGYNIQTRYKP--KVFRLTDKATLATNGFAADAEALV 70
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R+ R ++YQ R M A ++S +LY KRF PY+ ++ G+ +E + + D
Sbjct: 71 ARVKTRLEMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVYNILGGIDEEGRGAVYGYD 130
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVS 167
+G+ E V + GA + + +P ++ +F+ ++
Sbjct: 131 PVGSYE---RIVCCAS------GAAQGLLQPFLDNQVMFKNLN 164
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG ++A+ G++ +A D RL ++ D ++ ++ +G G D L
Sbjct: 41 DFNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHELTPTTVLGCPGSHNDIIQLR 100
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R ++YQ E M + L+ LY +RF PY+ ++ G+ + K + T D
Sbjct: 101 GVLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCILCGIDENGKGVVYTYD 160
Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPD--------ELFETVSQALLSSVDR 176
+IG+ + G+ G + + + + D D E + + A +++ +R
Sbjct: 161 AIGSYDRVTR-AAQGSGGHLMIPLLDNLVEHDTRTDPKKALTLQETKDIIKDAFITAGER 219
Query: 177 DCLSG 181
D +G
Sbjct: 220 DIYTG 224
>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome subunit beta-6
gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 258
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG + A+ G N + +D RL G +D ++ K+ DR+F+ SG+ D L Q
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
L +R + YQ + P T A L S +LY++RF PY+ +I G+ ++ +
Sbjct: 111 MLKYRIQWYQYNNGGKV-PSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSY 169
Query: 124 DSIGAKELAKDFVVAGTAGESLYGACEAMFK---------PDMEPDELFETVSQALLSSV 174
D +G+ E + + G+A + + + D+ +E + A +
Sbjct: 170 DPVGSTEPFR-YGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAA 228
Query: 175 DRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+RD +G +I+T + + + R D
Sbjct: 229 ERDIFTGDTVCFHIITADGVGTEMFELRKD 258
>gi|448339242|ref|ZP_21528272.1| proteasome endopeptidase complex, beta subunit [Natrinema pallidum
DSM 3751]
gi|445620748|gb|ELY74237.1| proteasome endopeptidase complex, beta subunit [Natrinema pallidum
DSM 3751]
Length = 243
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+ R
Sbjct: 62 IATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRAEVNLYEARRGE 121
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
M + A+L R GP+F P++ G+ DE + ++D G + D+ V G
Sbjct: 122 RMSIDALATLAGNF---ARGGPFFAIHPILGGVDDEGS-HVYSIDPAGGV-MEDDYTVTG 176
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ + YG E ++PDM +E ++ + S+V+RD SG G
Sbjct: 177 SGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNG 220
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ + + GK+ IA+++R ++ +++ KI + + +G+ D Q + +
Sbjct: 15 YPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY+L + + +T A ++S L+ R+ PYF + ++ G+ D P + +D
Sbjct: 75 EVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGI-DSQGPHVIVLDP 133
Query: 126 IGAKELAKDFVVAGTAGESLYGACE 150
+G+ + D+ V GT E G E
Sbjct: 134 LGSM-IEDDYAVVGTGAEVAVGVIE 157
>gi|448323944|ref|ZP_21513387.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
gi|445619946|gb|ELY73457.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
Length = 231
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 17 KNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQ 75
++ IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+
Sbjct: 45 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYE 104
Query: 76 LREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKD 134
R DM E A+L R GP+F P++ G+ DE+ + ++D G + D
Sbjct: 105 SRRGEDMSIEALANLAGNF---ARGGPFFAIHPILGGV-DEEGSHVFSIDPAGGV-MEDD 159
Query: 135 FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ V G+ + YG E ++ D+ DE ++++ S+ +RD SG G
Sbjct: 160 YTVTGSGMQLAYGHLEQAYEDDLSNDEATTIAARSIKSAAERDTGSGNG 208
>gi|302564219|ref|NP_001181793.1| proteasome subunit beta type-9 [Macaca mulatta]
Length = 209
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R++ LSG A D+Q +
Sbjct: 8 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIYCALSGSAADAQAVAD 67
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 68 MAAYQLELHGIELEEPPLVLAAANVVRNITYKYRE-DLSAHLMVAGWDQHEGGQV--YGT 124
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + F + G+ +YG +A +KP M P+E + A+ ++ RD S GG
Sbjct: 125 LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSS--GGV 182
Query: 186 VYIVTPTE--IKERILKGR 202
VY+VT T + R++ G
Sbjct: 183 VYLVTITAAGVDHRVILGN 201
>gi|402077428|gb|EJT72777.1| proteasome component C5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 264
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR--------LFIGLSGLAT 58
NG + +A+ G + +A D R+ + ++ +I L + + G A
Sbjct: 40 NGGSTLAIAGADFAIMAGDTRMASGYSINTRFYPKVFRIGGTTSDQKDATLVLSVVGFAA 99
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++AGL +E K
Sbjct: 100 DGEALKERLDAICKMYRYRHGKPMSAKACAKRLSTILYQKRFFPYYTHAILAGLDEEGKG 159
Query: 119 FICTMDSIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------- 159
+ + D +G+ E ++ AG A SL + + FK P
Sbjct: 160 AVYSYDPVGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYIPGSGEGHDLQERERVPL 217
Query: 160 --DELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
D++ V A +V+R G G + I+T I+E IL + D
Sbjct: 218 PRDQVEILVKDAFDGAVERHIEVGDGLQMMIITKDGIEEVILPLKQD 264
>gi|429193506|ref|YP_007179184.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
gi|429137724|gb|AFZ74735.1| proteasome endopeptidase complex, archaeal, beta subunit
[Natronobacterium gregoryi SP2]
Length = 242
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 17 KNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQ 75
++ IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+
Sbjct: 56 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRAEVNLYE 115
Query: 76 LREERDMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKD 134
R DM E A+L R GP+F P++ G+ DE+ + ++D G + D
Sbjct: 116 SRRGEDMSIEALANLAGNF---ARGGPFFAIHPILGGV-DEEGSHVFSIDPAGGV-MEDD 170
Query: 135 FVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ V G+ + YG E ++ D+ DE ++++ S+ +RD SG G
Sbjct: 171 YTVTGSGMQLAYGHLEQAYEDDLSNDEATTIAARSIKSAAERDTGSGNG 219
>gi|217073968|gb|ACJ85344.1| unknown [Medicago truncatula]
Length = 262
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +A + K +A+D R + + ++I +I+ + ++G A D Q ++ L
Sbjct: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +L++L +R + + L++ +LY R +IAG DE P + +DS G
Sbjct: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGSSVGTMIAGW-DETGPGLYYVDSEG 172
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ F V G+ YG ++ +K DM +E E +A+ + RD SG VY
Sbjct: 173 GRLKGNRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVY 231
Query: 188 IVTPTEIKE 196
V PT K+
Sbjct: 232 YVGPTGRKK 240
>gi|403268777|ref|XP_003926443.1| PREDICTED: proteasome subunit beta type-9 [Saimiri boliviensis
boliviensis]
Length = 219
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H+R++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGQAVVNRVFDKLSPLHERIYCALSGSAADAQAVAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGIELEEPPLVLAAANVVRNISYKYRE-DLSAHLLVAGWDQREGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + F + G+ +YG ++++KP M P+E + A+ ++ RD S GG
Sbjct: 135 LGGMLTRQPFAIGGSGSTYIYGYVDSVYKPGMSPEECRRFTTDAIALAMSRDGSS--GGV 192
Query: 186 VYIVTPTE--IKERILKGR 202
+Y+VT T + R++ G
Sbjct: 193 IYLVTITAAGVDHRVISGN 211
>gi|388500262|gb|AFK38197.1| unknown [Medicago truncatula]
Length = 271
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +A + K +A+D R + + ++I +I+ + ++G A D Q ++ L
Sbjct: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +L++L +R + + L++ +LY R +IAG DE P + +DS G
Sbjct: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGSSVGTMIAGW-DETGPGLYYVDSEG 172
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ F V G+ YG ++ +K DM +E E +A+ + RD SG VY
Sbjct: 173 GRLKGNRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVY 231
Query: 188 IVTPTEIKE 196
V PT K+
Sbjct: 232 YVGPTGRKK 240
>gi|238606166|ref|XP_002396644.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
gi|215469594|gb|EEB97574.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
Length = 59
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYNG +++AMVGK+C AIA D RLG Q I+++FQ+I + DR+++GL ATD TL
Sbjct: 2 EYNGGSVIAMVGKDCVAIACDLRLGNQALGISSNFQKIFPVSDRIYLGLPA-ATDVTTL 59
>gi|255988227|gb|ACU51028.1| 20S proteasome beta5 subunit [Conocephalum conicum]
Length = 280
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G+ +A V K +A+D R + + D ++I +I+ L ++G A D Q +
Sbjct: 59 HGTTTLAFVFKEGVIVAADSRASMGNYISSQDVKKILEINPYLLGTMAGGAADCQFWQRN 118
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R +L++L +R + + L++ LY R +IAG DE P + +DS
Sbjct: 119 LGTRCRLHELGNKRRISVTGASKLLANTLYSYRGMGLSMGTMIAGW-DETGPGLYYVDSE 177
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + + F V G+ YG + F+ DM +E E +++ + RD SG V
Sbjct: 178 GGRVKGRRFSV-GSGSTYAYGVLDTGFRWDMTVEEAVELARRSIYHATFRDGASGGVASV 236
Query: 187 YIVTPTEIKE 196
Y V P K+
Sbjct: 237 YYVGPDGWKK 246
>gi|37781216|gb|AAP36733.1| proteasome beta subunit [Xenopus (Silurana) tropicalis]
gi|165970624|gb|AAI58548.1| Unknown (protein for MGC:186705) [Xenopus (Silurana) tropicalis]
Length = 215
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ ++A+ + SD R+ + F +++ +H R++ LSG A D+Q +
Sbjct: 16 GTTIIAVEFDGGVVVGSDSRVSAGDAVVNRVFNKLAPVHQRIYCALSGSAADAQAVADMA 75
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +++ + E A+L+ + Y+ + ++AG ++ + ++G
Sbjct: 76 HYHMEVHSIEMEASPLVLAAANLIKGISYKYKE-EIAAHLIVAGWDSKNGGQV--YGTLG 132
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ F + G+ +YG ++ FKP M +E QAL +++RD S GG +Y
Sbjct: 133 GMITRQPFAIGGSGSTYIYGFVDSTFKPGMSREECETFAVQALSLAMERDGSS--GGVIY 190
Query: 188 IVTPTE--IKERILKG 201
+VT T+ K RI+ G
Sbjct: 191 LVTVTKEGTKNRIISG 206
>gi|388507486|gb|AFK41809.1| unknown [Medicago truncatula]
Length = 158
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L +
Sbjct: 14 NGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAPSGFQADVKALQKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
L RH YQ + + M A L+S LY KRF PY+ L+ +++
Sbjct: 74 LSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSSMCWVALTVKER 124
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 35 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
++ + +I +I + L + +G D +L + L KLY+ R R+M + A+L + +
Sbjct: 10 MSKNVTKIFQIDEHLALAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKALATLTANI 69
Query: 95 LYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFK 154
L ++ PYF +I G ++KP + ++D G K +V AG+ E Y E +K
Sbjct: 70 LNGTKYFPYFGWFLIGGY--DEKPNLYSVDMAGGMTEDK-YVSAGSGMEFAYAVLENEYK 126
Query: 155 PDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKE 196
DM DE + +A+ +++ RD +G G V +T +E
Sbjct: 127 EDMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKEGYRE 168
>gi|297290556|ref|XP_001108087.2| PREDICTED: proteasome subunit beta type-9-like isoform 1 [Macaca
mulatta]
gi|146157613|gb|ABQ08185.1| proteasome subunit beta type 9-like protein [Macaca fascicularis]
gi|355561579|gb|EHH18211.1| Proteasome subunit beta type-9 [Macaca mulatta]
gi|355766755|gb|EHH62550.1| Proteasome subunit beta type-9 [Macaca fascicularis]
Length = 219
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ ++A+ + SD R+ + F ++S +H R++ LSG A D+Q +
Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIYCALSGSAADAQAVAD 77
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ +L+ + E A++V + Y+ R ++AG + + +
Sbjct: 78 MAAYQLELHGIELEEPPLVLAAANVVRNITYKYRE-DLSAHLMVAGWDQHEGGQV--YGT 134
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + F + G+ +YG +A +KP M P+E + A+ ++ RD S GG
Sbjct: 135 LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSS--GGV 192
Query: 186 VYIVTPTE--IKERILKGR 202
VY+VT T + R++ G
Sbjct: 193 VYLVTITAAGVDHRVILGN 211
>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
Length = 242
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + + +G A D + L +R
Sbjct: 28 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIIMSANGFAADGEALVKR 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL DE K + + D
Sbjct: 88 FKNSIKWYHFDHNDKKLSISSAARNIQHLLYGKRFFPYYVHTIIAGLDDEGKGAVYSFDP 147
Query: 126 IGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETVS 167
+G+ E ++ AG A SL + + FK P +E+ + V
Sbjct: 148 VGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYVPGTDGKVKRELKYLSLEEVIKLVR 205
Query: 168 QALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
A S+ +R G G + IVT ++ + + D
Sbjct: 206 DAFTSATERHIHVGDGLEILIVTKEGVRTEFFELKRD 242
>gi|365762155|gb|EHN03761.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + ++ ++ D L + +G A D L +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNLVVSANGFAADGDALVK 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + + A + LLY KRF PY+ +IAGL + K + + D
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFD 145
Query: 125 SIGAKELAKDFVVAGTAGESL---YGACEAMFKPDMEP---------------DELFETV 166
+G+ E ++ AG A SL + + FK EP +E+ + V
Sbjct: 146 PVGSYE--REQCRAGGAAASLIMPFLDNQVNFKNQYEPGTDGKVKKPLKYLSVEEVIKLV 203
Query: 167 SQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 204
+ S+ +R G G + IVT +K+ + + D
Sbjct: 204 RDSFTSATERHIQVGDGLEILIVTKDGVKKEFYELKRD 241
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + +A+D + + + ++I I DR+ I +G D Q L +
Sbjct: 5 TGTTTVGIRVDEGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMLARI 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + YQ R M A+L+S +L E ++ PY Q VI G +E P I +D +
Sbjct: 65 LEVEARYYQFTWGRPMSTRAMANLLSNILNENKWFPYLVQIVIGGYVEE--PVIANLDPL 122
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHV 186
G + D+ G+ E ++ DM +E E +A+ + RD +G V
Sbjct: 123 GGL-IFDDYTATGSGSPFAIAVLEDGYRKDMGIEEAKELAVKAVKVAGKRDVYTG-SRKV 180
Query: 187 YIVTPTE 193
+VT T+
Sbjct: 181 QVVTITK 187
>gi|281201254|gb|EFA75466.1| hypothetical protein PPL_10970 [Polysphondylium pallidum PN500]
Length = 848
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL--YQ 65
G++++A+ + +D R +I+ IH++++ SG A D+Q + Y
Sbjct: 14 GTSIMAVAYNGGVVMGADSRTTTGSYVANRVTNKITPIHEKIYCCRSGSAADTQAISDYV 73
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R +L ++ D+K T ASL L Y + ++AG + + + S
Sbjct: 74 RYYLEMHNSELGDDPDVK--TAASLFQLLCYNNK-NNLLAGIIVAGWDKHNGGSVYNI-S 129
Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGH 185
+G + + F + G+ +YG C++ FKPDM DE E V +L ++ RD SG
Sbjct: 130 LGGSMVQQPFAIGGSGSTYIYGYCDSKFKPDMTKDECVEFVKNSLALAMFRDGSSGGVIR 189
Query: 186 VYIVTPTEIKERILKGR 202
+ ++ ++ R++
Sbjct: 190 LCVIDSNGVERRMIPAN 206
>gi|2055311|dbj|BAA19766.1| LMP2 [Oryzias latipes]
Length = 213
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 7/197 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ ++A+ + SD R+ + ++S +HDR++ LSG A D+QT+ + +
Sbjct: 14 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDRIYCALSGSAADAQTIAEMV 73
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
++ ++ L + D + + A+LV + Y+ + ++AG D + ++G
Sbjct: 74 NYQLDVHSLEIDEDPQVRSAATLVKNISYKYK-EELSAHLIVAGWDRRDGGQVFA--TLG 130
Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVY 187
+ F + G+ +YG +A ++ M +E + V L +++RD S GG Y
Sbjct: 131 GLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSS--GGVAY 188
Query: 188 IVTPTE--IKERILKGR 202
IVT E E+++ G
Sbjct: 189 IVTIDEHSTDEKVILGN 205
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + K +A+D + + + ++I I DR+ I +G D Q L +
Sbjct: 5 TGTTTVGIKVKEGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDVQMLARM 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + YQ + M + A+L+S +L E ++ PY Q +I G +E P + +D +
Sbjct: 65 LEAEARYYQFTWGKPMTAKAMANLLSNILNENKWFPYLVQIIIGGYVEE--PTLANLDPL 122
Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSG 181
G + D+ G+ E ++ DM +E E +A+ ++ RD +G
Sbjct: 123 GGL-IFDDYTATGSGSPFAIAILEEGYRKDMSIEEARELAIRAVRTAGKRDVYTG 176
>gi|433638518|ref|YP_007284278.1| proteasome endopeptidase complex, archaeal, beta subunit [Halovivax
ruber XH-70]
gi|433290322|gb|AGB16145.1| proteasome endopeptidase complex, archaeal, beta subunit [Halovivax
ruber XH-70]
Length = 242
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 22 IASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREER 80
IA+D R + + ++ + Q++ +IH + L G +Q+ L LY+ R
Sbjct: 61 IATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISNLRAEVNLYEARNSE 120
Query: 81 DMKPETFASLVSALLYEKRFGPYFC-QPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAG 139
DM + A+L R GP+F P++ G+ DE + ++D G + D+ V G
Sbjct: 121 DMSIDALATLAGNF---ARGGPFFAIHPILGGVDDE-GSHVYSIDPAGGV-MEDDYTVTG 175
Query: 140 TAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWG 183
+ + YG E ++ + DE ++ + S+V+RD SG G
Sbjct: 176 SGMQLAYGHLEQSYEDGLSNDEAMTIAARGIKSAVERDTGSGNG 219
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,044,662,464
Number of Sequences: 23463169
Number of extensions: 116803279
Number of successful extensions: 242174
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 1506
Number of HSP's that attempted gapping in prelim test: 238964
Number of HSP's gapped (non-prelim): 2939
length of query: 204
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 68
effective length of database: 9,168,204,383
effective search space: 623437898044
effective search space used: 623437898044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)