BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028742
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VK68|PITH1_DROME PITH domain-containing protein CG6153 OS=Drosophila melanogaster
GN=CG6153 PE=2 SV=1
Length = 211
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 120/200 (60%), Gaps = 5/200 (2%)
Query: 2 ACLHDHSCEDH--DCSSDWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLE 59
C H+ S DH + ++SLY IDL V LNE G KSVFK +E+R + S +++E
Sbjct: 11 GCSHEASDVDHALEMGIEYSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLS-KYVE 69
Query: 60 SNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEW 119
S D D ELL IPFT ++K+K I I G D + P+ +++F NR + F DA+ + QE+
Sbjct: 70 S-DADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDAR-AKPDQEF 127
Query: 120 DLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATI 179
L + +G +EY + F SV +++L+FP NFG D T+I+YIGL+GE T+ V
Sbjct: 128 QLTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGEDITRIYYIGLRGEFTEAHYHGVTIC 187
Query: 180 VYELRPNPSDHKTKSESGGG 199
YE R N +DHK K+ G G
Sbjct: 188 NYESRANAADHKEKAFDGVG 207
>sp|Q29L80|PITH1_DROPS PITH domain-containing protein GA19395 OS=Drosophila pseudoobscura
pseudoobscura GN=GA19395 PE=3 SV=1
Length = 211
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 5/200 (2%)
Query: 2 ACLHDHSCEDH--DCSSDWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLE 59
C H+ + DH + ++SLY ID + LNE GS K+VFK +E R + S
Sbjct: 11 GCGHEATDVDHALEMGIEYSLYTKIDAENLECLNEETEGSGKTVFKPYESRQDMS--KFV 68
Query: 60 SNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEW 119
+D D ELL IPFT ++K+K I I G D + P+K+++F NR + F DA+ ++ QE+
Sbjct: 69 QSDADEELLFNIPFTGNIKLKGIIICGANDDSHPNKVKIFKNRPKMTFDDAK-VKVDQEF 127
Query: 120 DLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATI 179
+L + +G +EY + F SV ++TL+FP NFG D T+I+YIGL+GE ++ V
Sbjct: 128 ELTRDPRGEIEYSPKVVNFSSVHHLTLYFPSNFGDDKTRIYYIGLRGEFSEAHYHGVTIC 187
Query: 180 VYELRPNPSDHKTKSESGGG 199
YE R N +DHK K G G
Sbjct: 188 NYEARANAADHKDKVFDGVG 207
>sp|Q9GZP4|PITH1_HUMAN PITH domain-containing protein 1 OS=Homo sapiens GN=PITHD1 PE=1
SV=1
Length = 211
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 3/174 (1%)
Query: 18 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDV 77
+ LY IDL ++ LNE+ GS + VFK WE+R + S + +ES D D ELL IPFT +V
Sbjct: 29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNV 86
Query: 78 KIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSK 137
K+K I I+G D + PS+MR++ N + F D + + Q + L +L G LEY T+ S+
Sbjct: 87 KLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPDQTFSLNRDLTGELEYATKISR 145
Query: 138 FQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHK 191
F +V ++++H NFG DTT++ YIGL+GE T+L+R V YE NP+DH+
Sbjct: 146 FSNVYHLSIHISKNFGADTTKVFYIGLRGEWTELRRHEVTICNYEASANPADHR 199
>sp|Q8BWR2|PITH1_MOUSE PITH domain-containing protein 1 OS=Mus musculus GN=Pithd1 PE=2
SV=1
Length = 211
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 111/174 (63%), Gaps = 3/174 (1%)
Query: 18 WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDV 77
+ LY IDL ++ LNE+ GS + VFK WE+R + S + +ES D D ELL IPFT +V
Sbjct: 29 YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS-KFVES-DADEELLFNIPFTGNV 86
Query: 78 KIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYSK 137
K+K + I+G D + PS+MR++ N + F D + + Q + L ++ G LEY T+ S+
Sbjct: 87 KLKGVIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPEQTFSLNRDITGELEYATKISR 145
Query: 138 FQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHK 191
F +V ++++H NFG DTT+I YIGL+GE T+L+R V YE NP+DH+
Sbjct: 146 FSNVYHLSIHISKNFGADTTKIFYIGLRGEWTELRRHEVTICNYEASANPADHR 199
>sp|Q54Z24|PITH1_DICDI PITH domain-containing protein 1 OS=Dictyostelium discoideum
GN=DDB_G0277951 PE=3 SV=1
Length = 202
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 8/198 (4%)
Query: 5 HDHSCEDHDCSSDWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGD 64
H H +D ++SL +++D ++ LNE V GSV+ +FK+WE R + +H + D
Sbjct: 10 HSHGVDD---GIEYSLNRYLDTGTITCLNEKVKGSVRHIFKSWEDRHDL--KHFVESCDD 64
Query: 65 PELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVEN 124
EL++ IPF +IKSI I+GG G+SP+KM+ +IN IDF + QEW+L E+
Sbjct: 65 EELIINIPFGAVTQIKSIIIIGGDGGSSPNKMKAYINNSNIDFGNINSFACTQEWNLHED 124
Query: 125 LQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELR 184
+G + Y T+ +KF ++ ++TL+FP NFG TT+I++I LKG T KR++V T VYE +
Sbjct: 125 FEGQIGYSTKPTKFNNINHLTLYFPSNFGSPTTKIYFIALKGVYTSAKREIVNT-VYESK 183
Query: 185 PNPSDHKTKSESGGGLSH 202
P DH KS+ G+SH
Sbjct: 184 PQLQDH--KSDIFNGVSH 199
>sp|Q6DJI5|PITH1_XENLA PITH domain-containing protein 1 OS=Xenopus laevis GN=pithd1 PE=2
SV=1
Length = 209
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
Query: 17 DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTD 76
++ L++ IDL K+ LNE+ GS +SVF+AWE+R N +ES+D D ELL IPFT +
Sbjct: 26 EYGLFRKIDLDKLQCLNESREGSGRSVFRAWEER-NDRTRFVESDD-DEELLFNIPFTGN 83
Query: 77 VKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYS 136
VK+K I ++G T P+++R+F N + F D +A Q + L ++ G LEY T+ +
Sbjct: 84 VKLKGIVLIGEDSDTHPAELRLFKNVPHMSFDDT-GREADQTFSLNIDVNGNLEYPTKIA 142
Query: 137 KFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHK 191
+F +V+++++H NFG + T+I+YIGL+GE T+ R V YE NP+DHK
Sbjct: 143 RFSNVSHLSIHISKNFGAENTKIYYIGLRGEWTEAHRHEVTICNYEAAANPADHK 197
>sp|Q95ZI6|PITH1_CAEEL PITH domain-containing protein ZK353.9 OS=Caenorhabditis elegans
GN=ZK353.9 PE=3 SV=1
Length = 208
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 122/203 (60%), Gaps = 18/203 (8%)
Query: 3 CLHDHSCEDHDCSSD------------WSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQR 50
C H HS H+C+++ + + +ID+ KV+ LNE+V G+ K VFK E+R
Sbjct: 2 CSHGHS---HNCAAEHIPEVPGDDVYRYDMVSYIDMEKVTTLNESVDGAGKKVFKVMEKR 58
Query: 51 LNSSGEHLESNDGDPELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDA 110
+ E++ES D D ELL IPFT V++ +SI+G DG+ P+K+R+F +RE + F D
Sbjct: 59 -DDRLEYVES-DCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSFDDC 116
Query: 111 QDMQAIQEWDLVENLQGVLEYQTRYSKFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQ 170
++A QE DL ++ QG+++Y + SKF ++ N+++ NFG D T+I+YIGL+GE
Sbjct: 117 S-IEADQEIDLKQDPQGLVDYPLKASKFGNIHNLSILVDANFGEDETKIYYIGLRGEFQH 175
Query: 171 LKRDVVATIVYELRPNPSDHKTK 193
R +A YE R DHK +
Sbjct: 176 EFRQRIAIATYESRAQLKDHKNE 198
>sp|Q6NYX8|PITH1_DANRE PITH domain-containing protein 1 OS=Danio rerio GN=pithd1 PE=2 SV=1
Length = 210
Score = 130 bits (327), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 109/178 (61%), Gaps = 3/178 (1%)
Query: 17 DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTD 76
++ LY+ ID+ K+ LNE+ G K VFK W+QR + + + +ES D D ELL IPFT
Sbjct: 27 EYELYRRIDIEKLQCLNESRDGDGKLVFKPWDQRTDRN-KFVES-DADEELLFNIPFTGS 84
Query: 77 VKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYS 136
VK+K I I G D + P+++R+F N + F D + Q + L + + LEY T+ +
Sbjct: 85 VKLKGIIISGEDDESHPAEIRLFKNIPQMSFDDTS-REPEQAFRLNRDPRAELEYPTKIA 143
Query: 137 KFQSVANITLHFPDNFGGDTTQIHYIGLKGEATQLKRDVVATIVYELRPNPSDHKTKS 194
+F +V ++++H NFG ++T+++YIGL+GE T+ R V YE NP+DHK +S
Sbjct: 144 RFSNVEHLSIHVSRNFGAESTRVYYIGLRGEYTEAHRHEVTICNYEAAANPADHKVES 201
>sp|Q9P7A1|PITH1_SCHPO PITH domain-containing protein P35G2.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.02 PE=3 SV=1
Length = 207
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 9 CEDHDCSS--DWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPE 66
C++H S + +LY I + LNEAVP S K VFK W+ R + + + +D D +
Sbjct: 11 CDEHPFESGPNDTLYSCIRKESIVTLNEAVPDSGKLVFKPWDLRYDDTD--IVESDADDQ 68
Query: 67 LLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQ 126
LL +PF +KSI + + T+P +F NR +DF D+QA + ++ +
Sbjct: 69 LLFQVPFAGAATLKSILVRIFPNETAPHSFSLFPNRTDLDFDTIGDVQATETFEFPLTFE 128
Query: 127 G--VLEYQTRYSKFQSVANITLHFPDNFGG-DTTQIHYIGLKGEATQLKRDVVATIVYEL 183
G + E+ + +Q++ N+ + F + G D TQI YIGL+G K D V TI YE
Sbjct: 129 GSHIFEFPVKTRLYQNLQNLNIFFTKSDGSDDPTQIAYIGLRGSFVPFKGDPVVTI-YEA 187
Query: 184 RPNPSDH 190
P PSDH
Sbjct: 188 TPRPSDH 194
>sp|Q9SQZ9|PITH1_ARATH PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana
GN=At3g04780 PE=1 SV=2
Length = 176
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 24/165 (14%)
Query: 20 LYKHIDLSKVSALNEA----VPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTT 75
L ID S V LN++ +P ++K ++ E G +LES D D +LL+YIPF
Sbjct: 16 LLDFIDWSGVECLNQSSSHSLPNALKQGYREDE------GLNLES-DADEQLLIYIPFNQ 68
Query: 76 DVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLV-ENLQG---VLEY 131
+K+ S +I G + P ++ F N+E + FS+ D +L ENL+G VL
Sbjct: 69 VIKLHSFAI-KGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVL-- 125
Query: 132 QTRYSKFQSVANITLHFPDN-FGGDTTQIHYIGLKG---EATQLK 172
+Y KFQ+V ++T+ N G + T++ I L G E T +K
Sbjct: 126 --KYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMK 168
>sp|Q8CDN6|TXNL1_MOUSE Thioredoxin-like protein 1 OS=Mus musculus GN=Txnl1 PE=1 SV=3
Length = 289
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 45 KAWEQRLNSSGEH------------LESNDGDPELLVYIPFTTDVKIKSISIVGGADGTS 92
KA + LN S EH LES D D +LL+ + F VK+ S+ G +G
Sbjct: 132 KAGCECLNESDEHGFDNCLRKDMSFLES-DCDEQLLITVAFNQPVKLYSMKFQGPDNGQG 190
Query: 93 PSKMRVFIN-REGIDFSDAQDMQAIQEWDLVEN---LQGVLEYQTRYSKFQSVANITLHF 148
P +++FIN +DF +A+ + Q +L E+ G++ RY KFQ+V ++TL
Sbjct: 191 PKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPL--RYVKFQNVNSVTLFV 248
Query: 149 PDNFG-GDTTQIHYIGLKGEATQ 170
N G +TT+I Y G Q
Sbjct: 249 QSNQGEEETTRISYFTFIGTPVQ 271
>sp|Q920J4|TXNL1_RAT Thioredoxin-like protein 1 OS=Rattus norvegicus GN=Txnl1 PE=1 SV=3
Length = 289
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 45 KAWEQRLNSSGEH------------LESNDGDPELLVYIPFTTDVKIKSISIVGGADGTS 92
KA + LN S EH LES D D +LL+ + F VK+ S+ G +G
Sbjct: 132 KAGCECLNESDEHGFDNCLRKDLSFLES-DCDEQLLITVAFNQPVKLYSMKFQGPDNGQG 190
Query: 93 PSKMRVFIN-REGIDFSDAQDMQAIQEWDLVEN---LQGVLEYQTRYSKFQSVANITLHF 148
P +++FIN +DF +A+ + Q +L E+ G++ RY KFQ+V ++TL
Sbjct: 191 PKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPL--RYVKFQNVNSVTLFV 248
Query: 149 PDNFG-GDTTQIHYIGLKGEATQ 170
N G +TT+I Y G Q
Sbjct: 249 QSNQGEEETTRISYFTFIGTPVQ 271
>sp|O43396|TXNL1_HUMAN Thioredoxin-like protein 1 OS=Homo sapiens GN=TXNL1 PE=1 SV=3
Length = 289
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 45 KAWEQRLNSSGEH------------LESNDGDPELLVYIPFTTDVKIKSISIVGGADGTS 92
KA + LN S EH LES D D +LL+ + F VK+ S+ G +G
Sbjct: 132 KAGCECLNESDEHGFDNCLRKDTTFLES-DCDEQLLITVAFNQPVKLYSMKFQGPDNGQG 190
Query: 93 PSKMRVFIN-REGIDFSDAQDMQAIQEWDLVEN---LQGVLEYQTRYSKFQSVANITLHF 148
P +++FIN +DF +A+ + Q +L E+ G++ RY KFQ+V ++T+
Sbjct: 191 PKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPL--RYVKFQNVNSVTIFV 248
Query: 149 PDNFG-GDTTQIHYIGLKGEATQ 170
N G +TT+I Y G Q
Sbjct: 249 QSNQGEEETTRISYFTFIGTPVQ 271
>sp|Q9USR1|TXL1_SCHPO Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=txl1 PE=4 SV=1
Length = 290
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 19 SLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSGEHLESNDGDPELLVYIPFTTDVK 78
SL I+ ++ LN+ +KS F NS+ +D D +L++YIPF VK
Sbjct: 128 SLQGCIENPQLECLNQQDDHDLKSAF-------NSNPSSFLESDVDEQLMIYIPFLEVVK 180
Query: 79 IKSISI--VGGADGTSPSKMRVFINR-EGIDFSDAQDM---QAIQEWDLVENLQGVLEYQ 132
+ SI+I V G ++P ++++IN+ + F DA+ Q I++ ++ Q +
Sbjct: 181 VHSIAITPVKGETSSAPKTIKLYINQPNNLSFEDAESFTPTQVIEDIVYEQDDQPTI-IP 239
Query: 133 TRYSKFQSVANITLHFPDNFG-GDTTQIHYIGLKGE 167
R+ KFQ V ++ + N G +TT+I + L GE
Sbjct: 240 LRFVKFQRVNSLVIFIYSNVGEEETTKISRLELFGE 275
>sp|Q97FX3|SPEE_CLOAB Spermidine synthase OS=Clostridium acetobutylicum (strain ATCC 824
/ DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=speE
PE=3 SV=1
Length = 286
Score = 34.7 bits (78), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 19/90 (21%)
Query: 66 ELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENL 125
E++ ++P + KIK + IVGG DG + +RE + ++ I++ D+VE
Sbjct: 64 EMITHVPMAVNPKIKKVLIVGGGDGGT--------SREILRYN------TIEKVDMVEID 109
Query: 126 QGVLEYQTRY-----SKFQSVANITLHFPD 150
+ V+ +Y K + + +T+HF D
Sbjct: 110 ERVVRLCQKYLTQTSCKLDNDSRLTMHFED 139
>sp|P20806|7LESS_DROVI Protein sevenless OS=Drosophila virilis GN=sev PE=3 SV=1
Length = 2594
Score = 33.9 bits (76), Expect = 0.84, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 88 ADGTSPSKMRVFINREGIDFSDAQDMQAIQEWDLVENLQGVLEYQTRYS 136
A T P ++RVF+ R+ A ++ A+ WD+ E G Q R S
Sbjct: 1320 AAPTQPRRLRVFVERQAAPLQLAPNVSALLRWDVPEEHAGSQSLQYRIS 1368
>sp|Q18A85|SPEE_CLOD6 Spermidine synthase OS=Clostridium difficile (strain 630) GN=speE
PE=3 SV=1
Length = 283
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 66 ELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDM 113
E++ ++P T++ IK + ++GG DG + ++ + E ID + M
Sbjct: 63 EMITHVPMATNLNIKKVLVIGGGDGGTVRELSRYPQIEKIDMVEIDKM 110
>sp|C4Z1Q7|SPEE_EUBE2 Spermidine synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI
C15-48) GN=speE PE=3 SV=1
Length = 285
Score = 33.5 bits (75), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 66 ELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQDM 113
E++V++P + +K++ I+GG DG ++ + N E ID + +M
Sbjct: 63 EMVVHVPMSVHPDVKNVLIIGGGDGGVSKELLQYDNIENIDIVEQDNM 110
>sp|Q8VYW6|GAGT1_ARATH Gamma-glutamyltranspeptidase 1 OS=Arabidopsis thaliana GN=GGT1 PE=2
SV=1
Length = 572
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 23 HIDLSKVSALNEAVPGSVKSVFKAWEQ 49
++DL K AL+ VPG V +F AW+Q
Sbjct: 114 NVDLKKKGALSVGVPGEVAGLFTAWKQ 140
>sp|A8MLM9|SPEE_ALKOO Spermidine synthase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=speE PE=3 SV=1
Length = 284
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 66 ELLVYIPFTTDVKIKSISIVGGADGTSPSKMRVFINREGID 106
+++ +IP T+ KIK++ ++G DG + ++ + E ID
Sbjct: 63 DMITHIPMATNPKIKNVLVIGAGDGGTVRELTRYETIENID 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,467,070
Number of Sequences: 539616
Number of extensions: 3152476
Number of successful extensions: 5675
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5630
Number of HSP's gapped (non-prelim): 30
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)