BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028743
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1
Length = 276
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/204 (82%), Positives = 191/204 (93%)
Query: 1 MVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVF 60
M+GDRGFDP GLGKP EYLQYDFD LDQNLAKN G+++G+I +S E++PTP QPYTEVF
Sbjct: 73 MIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVF 132
Query: 61 GLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELVEGSSYLGQPLPFSLTTL 120
G+QRFRECELIHGRWAMLGTLGAIAVEALTG+AWQDAGKVELVEGSSYLGQPLPFSLTTL
Sbjct: 133 GIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTL 192
Query: 121 IWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAMVA 180
IWIEV+V+GYIE+QRN+ELDP KR+YPGGYFDPLGLA+DP KL+ L+LAEIKH+RLAMVA
Sbjct: 193 IWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVA 252
Query: 181 FLIFGIQAAFTGKGPISFVATFNQ 204
FLIF +QAAFTGKGP+SF+ATFN
Sbjct: 253 FLIFALQAAFTGKGPVSFLATFNN 276
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Length = 287
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/202 (76%), Positives = 173/202 (85%), Gaps = 1/202 (0%)
Query: 1 MVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVF 60
+VGD GFDP GLGKP EYLQ+D DSLDQNLAKN GE++G T++ + + TP QPY+EVF
Sbjct: 69 LVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVF 128
Query: 61 GLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELVEGSSYLGQPLPFSLTTL 120
GLQRFRECELIHGRWAML TLGAI VE LTGV WQDAGKVELV+GSSYLGQPLPFS++TL
Sbjct: 129 GLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTL 188
Query: 121 IWIEVIVIGYIEYQRNAELDPVKRLYPGG-YFDPLGLASDPGKLENLQLAEIKHARLAMV 179
IWIEV+VIGYIE+QRNAELD KRLYPGG +FDPLGLASDP K LQLAEIKHARLAMV
Sbjct: 189 IWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMV 248
Query: 180 AFLIFGIQAAFTGKGPISFVAT 201
FL F +QAA TGKGP++ AT
Sbjct: 249 GFLGFAVQAAATGKGPLNNWAT 270
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Length = 290
Score = 314 bits (804), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/202 (75%), Positives = 175/202 (86%), Gaps = 1/202 (0%)
Query: 1 MVGDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTPLQPYTEVF 60
+VGD GFDP GLGKP EYLQ+D DSLDQNLAKN G+++G T++ + + TP QPY+EVF
Sbjct: 72 LVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVF 131
Query: 61 GLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELVEGSSYLGQPLPFSLTTL 120
G+QRFRECELIHGRWAML TLGA++VE LTGV WQDAGKVELV+GSSYLGQPLPFS++TL
Sbjct: 132 GIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTL 191
Query: 121 IWIEVIVIGYIEYQRNAELDPVKRLYPGG-YFDPLGLASDPGKLENLQLAEIKHARLAMV 179
IWIEV+VIGYIE+QRNAELD KRLYPGG +FDPLGLA+DP K LQLAEIKHARLAMV
Sbjct: 192 IWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMV 251
Query: 180 AFLIFGIQAAFTGKGPISFVAT 201
AFL F +QAA TGKGP++ AT
Sbjct: 252 AFLGFAVQAAATGKGPLNNWAT 273
>sp|Q93WD2|CB29_CHLRE Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii
GN=Lhcb4 PE=1 SV=3
Length = 280
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 146/209 (69%), Gaps = 16/209 (7%)
Query: 3 GDRGFDPLGLGKPTEYLQYDFDSLDQNLAKNDVGELLGVITDSGELQPTP--------LQ 54
GDRGFDPLGL KP+E++ D DQN AKN+ G + ++ Q TP L
Sbjct: 69 GDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIV------QATPDEVSSENRLA 122
Query: 55 PYTEVFGLQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELVEGSSYLGQPLP 114
PY+EVFGL RFRECELIHGRWAML LGA+ EA TGV+W +AGKVEL +G+SY G LP
Sbjct: 123 PYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL-DGASYAGLSLP 181
Query: 115 FSLTTLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLAS-DPGKLENLQLAEIKH 173
FS+T LIWIEVI++G E+ RN+E +P KR YPGG FDPL LAS D + L+ AEIKH
Sbjct: 182 FSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKH 241
Query: 174 ARLAMVAFLIFGIQAAFTGKGPISFVATF 202
ARLAMV+F +G+QA TG+G + +A F
Sbjct: 242 ARLAMVSFFGYGVQALSTGEGALGSLAKF 270
>sp|Q01667|CAB6_ARATH Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis
thaliana GN=LHCA1 PE=1 SV=1
Length = 241
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 98/144 (68%), Gaps = 4/144 (2%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELVEG--SSYLGQPLPF-SLT 118
L+R++E ELIH RWAML G + EAL W A + + G ++YLG P+P+ +L
Sbjct: 80 LERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLP 139
Query: 119 TLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAM 178
T++ IE + I ++E+QR+ E DP K+ YPGG FDPLG + DP KLE L++ EIK+ RLA+
Sbjct: 140 TILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLAL 199
Query: 179 VAFLIFGI-QAAFTGKGPISFVAT 201
+AF+ F + Q+A+ G GP+ +AT
Sbjct: 200 LAFVGFCVQQSAYPGTGPLENLAT 223
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 147 PGGY-FDPLGLASDPGKLENLQLAEIKHARLAMVA 180
PG + FDPLGL P LE + +E+ H R AM+A
Sbjct: 63 PGDFGFDPLGLGEVPANLERYKESELIHCRWAMLA 97
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum
lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGKVELVEG--SSYLGQPLPF-SLT 118
L+R++E ELIH RWAML G I EAL W A + + G ++YLGQP+P+ +L
Sbjct: 81 LERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLP 140
Query: 119 TLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAM 178
T++ IE + I ++E+QR+ E D K+ YPGG FDPLG + DP K E L++ EIK+ RLA+
Sbjct: 141 TILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLAL 200
Query: 179 VAFLIFGI-QAAFTGKGPISFVAT 201
+A + F + Q+A+ G GP+ +AT
Sbjct: 201 LAIVGFCVQQSAYLGTGPLENLAT 224
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 147 PGGY-FDPLGLASDPGKLENLQLAEIKHARLAMVA 180
PG + FD LGL P LE + +E+ H R AM+A
Sbjct: 64 PGDFGFDSLGLGEVPANLERYKESELIHCRWAMLA 98
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum
vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 93/144 (64%), Gaps = 4/144 (2%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTGVAWQDAGK-VELVEG-SSYLGQPLPF-SLT 118
+RF+E E+ H RWAML G + EAL W A + L +G ++YLG P+P+ +L
Sbjct: 80 FERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLP 139
Query: 119 TLIWIEVIVIGYIEYQRNAELDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKHARLAM 178
T++ IE + I + E QR E DP K+ YPGG FDPLG + DP K E L+L EIK+ RLAM
Sbjct: 140 TILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAM 199
Query: 179 VAFLIFGI-QAAFTGKGPISFVAT 201
+AF+ F + Q+A+ G GP+ +AT
Sbjct: 200 LAFVGFCVQQSAYPGTGPLENLAT 223
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 84/154 (54%), Gaps = 15/154 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 91 FARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAELDPVKR----LYPGGYFDPLGLASDPGKLENL 166
++ IW +VI++G +E R A P+ LYPGG FDPLGLA+DP L
Sbjct: 151 LVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAEL 210
Query: 167 QLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 211 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 244
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 17/150 (11%)
Query: 64 RFRECELIHGRWAMLGTLGAIAVEALTGVA--------WQDAGKVELVEGS-SYLGQPLP 114
R+RE ELIH RWA+LG LG + E L+ A W AG +G +YLG
Sbjct: 78 RYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESL 137
Query: 115 F---SLTTLIWIEVIVIGYIE-YQRNAE----LDPVKRLYPGGYFDPLGLASDPGKLENL 166
S+ + ++V+++G E Y+ N LD + LYPGG FDPLGLA DP L
Sbjct: 138 IHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAEL 197
Query: 167 QLAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
++ EIK+ RLAM + L F +QA TGKGP+
Sbjct: 198 KVKEIKNGRLAMFSCLGFFVQAIVTGKGPV 227
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 15/154 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E A GV W AG +G YLG P
Sbjct: 92 FARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 151
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAELDPVKR----LYPGGYFDPLGLASDPGKLENL 166
++ IW +VI++G +E R A P+ LYPGG FDPLGLA+DP L
Sbjct: 152 LVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAEL 211
Query: 167 QLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
++ E+K+ RLAM + F +QA TGKGPI +A
Sbjct: 212 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 15/154 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E A GV W AG +G YLG P
Sbjct: 92 FARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 151
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAELDPVKR----LYPGGYFDPLGLASDPGKLENL 166
++ IW +VI++G +E R A P+ LYPGG FDPLGLA+DP L
Sbjct: 152 LVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAEL 211
Query: 167 QLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
++ E+K+ RLAM + F +QA TGKGPI +A
Sbjct: 212 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 15/154 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E A GV W AG +G YLG P
Sbjct: 92 FARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPS 151
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAELDPVKR----LYPGGYFDPLGLASDPGKLENL 166
++ IW +VI++G +E R A P+ LYPGG FDPLGLA+DP L
Sbjct: 152 LVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAEL 211
Query: 167 QLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
++ E+K+ RLAM + F +QA TGKGPI +A
Sbjct: 212 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLA 245
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 81/150 (54%), Gaps = 20/150 (13%)
Query: 64 RFRECELIHGRWAMLGTLGAIAVEAL--TGV-----AWQDAGKVELVEGS-SYLGQPLPF 115
R RE E+IH RWAMLG LG E L GV W AG EG YLG P
Sbjct: 93 RNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLI 152
Query: 116 SLTTL--IW-IEVIVIGYIEYQR------NAELDPVKRLYPGGYFDPLGLASDPGKLENL 166
++ IW +V+++G++E R LDP LYPGG FDPLGLA DP L
Sbjct: 153 HAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDP---LYPGGAFDPLGLADDPDSFAEL 209
Query: 167 QLAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
++ E+K+ RLAM + F +QA TGKGPI
Sbjct: 210 KVKELKNGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E L+ W AG EG YLG P
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPN 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQR------NAELDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G++E R LDP+ YPGG FDPLGLA DP
Sbjct: 151 LIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPI---YPGGAFDPLGLADDPDAFA 207
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
L++ EIK+ RLAM + F +QA TGKGPI
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Query: 66 RECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPLPFSL 117
RE E+IH RWAMLG LG I E L+ W AG EG YLG P
Sbjct: 94 RELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHA 153
Query: 118 TTL--IW-IEVIVIGYIEYQR------NAELDPVKRLYPGGYFDPLGLASDPGKLENLQL 168
++ IW +V+++G IE R LDP LYPGG FDPLGLA DP L++
Sbjct: 154 QSILAIWATQVVLMGLIEGYRVGGGPLGEGLDP---LYPGGAFDPLGLADDPEAFAELKV 210
Query: 169 AEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
EIK+ RLAM + F +QA TGKGPI +A
Sbjct: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLA 242
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E L+ W AG EG YLG P
Sbjct: 89 FARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPN 148
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQR---NAELDPVKRLYPGGYFDPLGLASDPGKLENLQ 167
++ IW ++V+++G++E R + + ++YPGG FDPLGLA DP L+
Sbjct: 149 LVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELK 208
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
+ E+K+ RLAM + F +QA TGKGPI
Sbjct: 209 VKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E L+ W AG EG YLG P
Sbjct: 89 FARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPN 148
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQR---NAELDPVKRLYPGGYFDPLGLASDPGKLENLQ 167
++ IW ++V+++G++E R + + ++YPGG FDPLGLA DP L+
Sbjct: 149 LVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELK 208
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
+ E+K+ RLAM + F +QA TGKGPI
Sbjct: 209 VKELKNGRLAMFSMFGFFVQAIVTGKGPI 237
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E L+ W AG EG YLG P
Sbjct: 91 FARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPN 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQR---NAELDPVKRLYPGGYFDPLGLASDPGKLENLQ 167
++ IW +V+++G++E R + + ++YPGG FDPLGLA DP L+
Sbjct: 151 LVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 210
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
+ EIK+ RLAM + F +QA TGKGPI
Sbjct: 211 VKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 14/149 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALT--GVA-----WQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P
Sbjct: 91 FARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPN 150
Query: 114 PFSLTTL--IWI-EVIVIGYIEYQR---NAELDPVKRLYPGGYFDPLGLASDPGKLENLQ 167
++ IW +V+++G++E R + + ++YPGG FDPLGLA DP L+
Sbjct: 151 LIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 210
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
+ EIK+ RLAM + F +QA TGKGPI
Sbjct: 211 VKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 20/152 (13%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E A +GV W AG EG YLG P
Sbjct: 94 FARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 153
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A DP+ YPGG FDPLGLA DP
Sbjct: 154 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPI---YPGGSFDPLGLADDPDTFA 210
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
L++ EIK+ RLAM + F +QA TGKGP+
Sbjct: 211 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 14/149 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALT--GVA-----WQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P
Sbjct: 63 FARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPN 122
Query: 114 PFSLTTL--IWI-EVIVIGYIEYQR---NAELDPVKRLYPGGYFDPLGLASDPGKLENLQ 167
++ IW +V+++G++E R + + ++YPGG FDPLGLA DP L+
Sbjct: 123 LIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 182
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
+ EIK+ RLAM + F +QA TGKGPI
Sbjct: 183 VKEIKNGRLAMFSMFGFFVQAIVTGKGPI 211
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 83/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 104 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQ 163
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G IE R A DP+ YPGG FDPLGLA DP
Sbjct: 164 LIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPI---YPGGNFDPLGLADDPDAFA 220
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGPI +A
Sbjct: 221 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLA 256
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 86/157 (54%), Gaps = 21/157 (13%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTGVA--------WQDAGKVELVEGS-SYLGQP 112
+++RE E+IH RWA+LG LG + E L+ A W AG EG YLG P
Sbjct: 81 FKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSP 140
Query: 113 LPF---SLTTLIWIEVIVIGYIE-YQRNAE-----LDPVKRLYPGGYFDPLGLASDPGKL 163
++ + ++V+++G IE Y+ N LDP LYPG FDPLGLA DP
Sbjct: 141 ALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDP---LYPGESFDPLGLADDPDTF 197
Query: 164 ENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGPI +A
Sbjct: 198 AELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLA 234
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 87 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 146
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW ++V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 147 LIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFA 203
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 204 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 239
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Query: 44 DSGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQD 96
D+ EL P E F + RE E+IH RWAMLG LG + E A GV W
Sbjct: 82 DTAELSADP-----ETFA--KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134
Query: 97 AGKVELVEGS-SYLGQPLPFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLY 146
AG EG YLG P ++ IW +V+++G +E R A +DP LY
Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LY 191
Query: 147 PGGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
PGG FDPLGLA DP L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 192 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 245
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 104 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQ 163
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G IE R A DP+ YPGG FDPLGLA DP
Sbjct: 164 LIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPI---YPGGNFDPLGLADDPDAFA 220
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
++++ EIK+ RLAM + F +QA TGKGPI +A
Sbjct: 221 DVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLA 256
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 91 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW ++V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 151 LIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGAFDPLGLADDPEAFA 207
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 243
>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type III, chloroplastic
OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 82/151 (54%), Gaps = 16/151 (10%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEAL---TGV-----AWQDAGKVELVEGS-SYLGQP 112
R R E+IHGRWAMLG LG + E L GV W AG EG YLG P
Sbjct: 92 FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151
Query: 113 ---LPFSLTTLIWIEVIVIGYIEYQRNAELDPV---KRLYPGG-YFDPLGLASDPGKLEN 165
S+ ++ +V+++G +E R LD V LYPGG YFDPLGLA DP
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAE 211
Query: 166 LQLAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
L++ EIK+ RLAM + F +QA TGKGP+
Sbjct: 212 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P
Sbjct: 94 FSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 153
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 154 LVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFA 210
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ E+K+ RLAM + F +QA TGKGP+ +A
Sbjct: 211 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 246
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P
Sbjct: 95 FSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 154
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 155 LVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFA 211
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ E+K+ RLAM + F +QA TGKGP+ +A
Sbjct: 212 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 247
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 92 FAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 152 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLGLADDPEAFA 208
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 244
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 153 LVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFA 209
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 245
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 151 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFA 207
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 243
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 79/152 (51%), Gaps = 20/152 (13%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPL 113
+R+RE ELIH RWAMLG LG E L W AG EG YLG P
Sbjct: 79 FKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPS 138
Query: 114 PFSLTTLIW---IEVIVIGYIE-YQRNAE-----LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ ++VI++G IE Y+ N LDP LYPG FDPLGLA DP
Sbjct: 139 LVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDP---LYPGESFDPLGLADDPDTFA 195
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
L++ EIK+ RLA + F +QA TGKGP+
Sbjct: 196 ELKVKEIKNGRLASFSMFGFFVQAIVTGKGPV 227
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 133 YQRNAELDPVKRLYPGGY-FDPLGLASDPGKLENLQLAEIKHARLAMVAFL 182
Y NA + +PG Y +D GL++DP + + E+ HAR AM+ L
Sbjct: 48 YSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGAL 98
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 92 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 152 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFA 208
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 244
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 153 LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFA 209
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 245
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 90 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 149
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G +E R A +DP LYPGG FDPLGLA DP +
Sbjct: 150 LVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDP---LYPGGSFDPLGLAEDPERSA 206
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ E+K+ RLAM + F +QA TGKGP+ +A
Sbjct: 207 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 242
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 14/153 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 92 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAEL---DPVKRLYPGGYFDPLGLASDPGKLENLQ 167
++ IW +V+++G +E R A + V LYPGG FDPLGLA DP L+
Sbjct: 152 LVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELK 211
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
+ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 212 VKEIKNGRLAMFSMFGFFVQALVTGKGPLENLA 244
>sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max
GN=CAB2 PE=3 SV=1
Length = 256
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 89/173 (51%), Gaps = 24/173 (13%)
Query: 45 SGELQPTPLQPYTEVFGLQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDA 97
+GE P T + RE E+IH RWAMLG LG + E A GV W A
Sbjct: 69 TGEFHGLSADPET----FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 124
Query: 98 GKVELVEGS-SYLGQPLPFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYP 147
G EG YLG P ++ IW +VI++G +E R A DP+ YP
Sbjct: 125 GSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPI---YP 181
Query: 148 GGYFDPLGLASDPGKLENLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
GG FDPLGLA DP L L++ E+K+ RLAM + F +QA TGKGP+ +A
Sbjct: 182 GGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 234
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 153 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFA 209
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 245
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALTG-------VAWQDAGKVELVEGS-SYLGQPL 113
R RE E+IH RWAMLG LG + E L+ W AG EG YLG P
Sbjct: 91 FARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPN 150
Query: 114 PFSLTTL--IWI-EVIVIGYIEYQR---NAELDPVKRLYPGGYFDPLGLASDPGKLENLQ 167
++ +W +V+++G IE R + + ++YPGG FDPLGLA DP L+
Sbjct: 151 LIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 210
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
+ EIK+ RLAM + F +QA TGKGPI
Sbjct: 211 VKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 91 FAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPS 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNA--ELDPVKR-LYPGGYFDPLGLASDPGKLENLQ 167
++ IW +VI++G +E R A L V+ +YPGG FDPLGLA DP L+
Sbjct: 151 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELK 210
Query: 168 LAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
+ E+K+ RLAM + F +QA TGKGPI
Sbjct: 211 VKELKNGRLAMFSMFGFFVQAIVTGKGPI 239
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 83/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 100 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 159
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G +E R A DP+ YPGG FDPLGLA DP
Sbjct: 160 LVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPI---YPGGSFDPLGLAEDPEAFA 216
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGPI +A
Sbjct: 217 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLA 252
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A G+ W AG EG YLG P
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPS 152
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 153 LVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLGLAEDPEAFA 209
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 245
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 151 LVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFA 207
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ EIK+ RLAM + F +QA TGKGP+ +A
Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLA 243
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P
Sbjct: 88 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 147
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 148 LIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFA 204
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ E+K+ RLAM + F +QA TGKGP+ +A
Sbjct: 205 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 240
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 91 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 150
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G IE R A +DP LYPGG FDPLGLA DP
Sbjct: 151 LIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDP---LYPGGTFDPLGLADDPEAFA 207
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
++++ E+K+ RLAM + F +QA TGKGP+ +A
Sbjct: 208 DVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 243
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 81/152 (53%), Gaps = 20/152 (13%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 152
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G IE R A DP LYPGG FDPLGLA DP
Sbjct: 153 LVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDP---LYPGGSFDPLGLADDPEAFA 209
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPI 196
L++ EIK+ RLAM + F +QA TGKGP+
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVEALT--GV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E L+ GV W AG EG YLG P
Sbjct: 89 FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 148
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +VI++G +E R A DP+ YPGG FDPLGLA DP
Sbjct: 149 LIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPI---YPGGSFDPLGLADDPEAFA 205
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ E+K+ RLAM + F +QA TGKGP+ +A
Sbjct: 206 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 241
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 83/156 (53%), Gaps = 20/156 (12%)
Query: 62 LQRFRECELIHGRWAMLGTLGAIAVE--ALTGV-----AWQDAGKVELVEGS-SYLGQPL 113
+ RE E+IH RWAMLG LG + E A GV W AG EG YLG P
Sbjct: 93 FAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPS 152
Query: 114 PFSLTTL--IW-IEVIVIGYIEYQRNAE------LDPVKRLYPGGYFDPLGLASDPGKLE 164
++ IW +V+++G +E R A +DP LYPGG FDPLGLA DP
Sbjct: 153 LVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDP---LYPGGSFDPLGLAEDPEAFA 209
Query: 165 NLQLAEIKHARLAMVAFLIFGIQAAFTGKGPISFVA 200
L++ E K+ RLAM + F IQA TGKGP+ +A
Sbjct: 210 ELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLA 245
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.142 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,549,675
Number of Sequences: 539616
Number of extensions: 3638643
Number of successful extensions: 7141
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 6826
Number of HSP's gapped (non-prelim): 221
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)