BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028744
(204 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 16/118 (13%)
Query: 60 GRLPL----IGNLLQLKE----KKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKE 111
RLPL I +L+L+ PH T TR + ++G Y I G + L A + E
Sbjct: 339 ARLPLLNATIAEVLRLRPVVPLALPHRT-TRPSSIFG--YDIPEGMVVIPNLQGAHL-DE 394
Query: 112 KQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEF 169
WE P E++P+RFL+ +P+ L AFG G RVC G A L + RL+Q F
Sbjct: 395 TVWEQPHEFRPDRFLEPGANPSAL----AFGCGARVCLGESLARLELFVVLARLLQAF 448
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 63 PLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKE 111
PL+ L L + + + GP+Y ++ G ++VLNS +E
Sbjct: 32 PLVPGFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEE 80
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP+IGN+LQ+ K +FT ++++YGP++++ G + ++V + + KE
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALI 70
Query: 115 ENPEEW 120
+N EE+
Sbjct: 71 DNGEEF 76
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVC 148
Y I G + M +L S + +K++ NP + P FLD G +D + M F AGKR+C
Sbjct: 361 YLIPKGTTIMALLTSV-LHDDKEFPNPNIFDPGHFLDKNGNFKKSDYF--MPFSAGKRIC 417
Query: 149 AGSLQASLIACTAIGRLVQEFKWNLREGEE-ESVDTVGLT 187
AG A + + ++Q F NL+ ++ ++++T +T
Sbjct: 418 AGEGLARMELFLFLTTILQNF--NLKSVDDLKNLNTTAVT 455
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP+IGNL QL+ K +FTR A+ +GP++++ G+ M+V++ KE
Sbjct: 11 LPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALL 70
Query: 115 ENPEEW 120
+ +E+
Sbjct: 71 DYKDEF 76
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVC 148
Y I G + L+S + +++ +PE+++PE FL+ G+ +D +K F GKRVC
Sbjct: 360 YLIPKGTVVVPTLDSV-LYDNQEFPDPEKFKPEHFLNENGKFKYSDYFK--PFSTGKRVC 416
Query: 149 AGSLQASLIACTAIGRLVQEF 169
AG A + + ++Q F
Sbjct: 417 AGEGLARMELFLLLCAILQHF 437
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP+IGN+LQ+ K + T +++YGP++++ G M+VL+ +V KE
Sbjct: 12 LPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALI 71
Query: 115 ENPEEW 120
+ EE+
Sbjct: 72 DLGEEF 77
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAG 150
Y I G + + L S + K++ NPE + P FLD + M F AGKR+C G
Sbjct: 362 YLIPKGTTILTSLTSV-LHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVG 420
Query: 151 SLQASLIACTAIGRLVQEF 169
A + + ++Q F
Sbjct: 421 EGLARMELFLFLTFILQNF 439
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D KE
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALV 70
Query: 115 ENPEEW 120
+ EE+
Sbjct: 71 DQAEEF 76
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 114 WENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
+ NP ++ P+ FLD GQ +D + + F GKR C G A + ++Q F++
Sbjct: 383 FSNPRDFNPQHFLDKKGQFKKSDAF--VPFSIGKRYCFGEGLARMELFLFFTTIMQNFRF 440
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P P+IGN+LQ+ K + T+++E YGP++++ G +VL+ + KE
Sbjct: 11 LPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALV 70
Query: 115 ENPEEW 120
+ EE+
Sbjct: 71 DLGEEF 76
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVC 148
Y I G + L S + EK + NP+ + P FLD G +D + M F AGKR+C
Sbjct: 358 YFIPKGTDIITSLTSV-LHDEKAFPNPKVFDPGHFLDESGNFKKSDYF--MPFSAGKRMC 414
Query: 149 AGSLQASLIACTAIGRLVQEFK 170
G A + + ++Q FK
Sbjct: 415 VGEGLARMELFLFLTSILQNFK 436
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 115 ENPEEW 120
+ EE+
Sbjct: 71 DQAEEF 76
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 114 WENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
+ NP+++ P+ FL+ GQ +D + + F GKR C G A + ++Q F+
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 115 ENPEEW 120
+ EE+
Sbjct: 71 DQAEEF 76
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 114 WENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
+ NP+++ P+ FL+ GQ +D + + F GKR C G A + ++Q F+
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 115 ENPEEW 120
+ EE+
Sbjct: 71 DQAEEF 76
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 114 WENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
+ NP+++ P+ FL+ GQ +D + + F GKR C G A + ++Q F+
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 115 ENPEEW 120
+ EE+
Sbjct: 71 DQAEEF 76
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 114 WENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
+ NP+++ P+ FL+ GQ +D + + F GKR C G A + ++Q F+
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP IGN LQL ++ + + + +E YGP+++I G ++VL D +E
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 115 ENPEEW 120
+ EE+
Sbjct: 71 DQAEEF 76
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 114 WENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
+ NP+++ P+ FL+ GQ +D + + F GKR C G A + ++Q F+
Sbjct: 383 FSNPQDFNPQHFLNEKGQFKKSDAF--VPFSIGKRNCFGEGLARMELFLFFTTVMQNFR 439
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 115 ENPEEW 120
+ E +
Sbjct: 71 DQAEAF 76
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
PH T T+ + G Y I VL+SA + + +E P + P FLD
Sbjct: 349 PH-TVTKDTQFRG--YVIPKNTEVFPVLSSA-LHDPRYFETPNTFNPGHFLDANGALKRN 404
Query: 136 YKTMAFGAGKRVCAG 150
M F GKR+C G
Sbjct: 405 EGFMPFSLGKRICLG 419
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 115 ENPEEW 120
+ E +
Sbjct: 71 DQAEAF 76
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
PH T T+ + G Y I VL+SA + + +E P + P FLD
Sbjct: 349 PH-TVTKDTQFRG--YVIPKNTEVFPVLSSA-LHDPRYFETPNTFNPGHFLDANGALKRN 404
Query: 136 YKTMAFGAGKRVCAG 150
M F GKR+C G
Sbjct: 405 EGFMPFSLGKRICLG 419
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 115 ENPEEW 120
+ E +
Sbjct: 71 DQAEAF 76
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
PH T T+ + G Y I VL+SA + + +E P + P FLD
Sbjct: 349 PH-TVTKDTQFRG--YVIPKNTEVFPVLSSA-LHDPRYFETPNTFNPGHFLDANGALKRN 404
Query: 136 YKTMAFGAGKRVCAG 150
M F GKR+C G
Sbjct: 405 EGFMPFSLGKRICLG 419
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 115 ENPEEW 120
+ E +
Sbjct: 71 DQAEAF 76
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
PH T T+ + G Y I VL+SA + + +E P + P FLD
Sbjct: 349 PH-TVTKDTQFRG--YVIPKNTEVFPVLSSA-LHDPRYFETPNTFNPGHFLDANGALKRN 404
Query: 136 YKTMAFGAGKRVCAG 150
M F GKR+CAG
Sbjct: 405 EGFMPFSLGKRICAG 419
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP++GNLLQ+ K +F R E YG ++++ G+ ++VL D +E
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 115 ENPEEW 120
+ E +
Sbjct: 71 DQAEAF 76
Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
PH T T+ + G Y I VL+SA + + +E P + P FLD
Sbjct: 349 PH-TVTKDTQFRG--YVIPKNTEVFPVLSSA-LHDPRYFETPNTFNPGHFLDANGALKRN 404
Query: 136 YKTMAFGAGKRVCAG 150
M F GKR+C G
Sbjct: 405 EGFMPFSLGKRICLG 419
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 77 HMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLY 136
HMT +R E+ G + I G + + L+S + E WE P + PE FLD Q
Sbjct: 354 HMT-SRDIEVQG--FRIPKGTTLITNLSSV-LKDEAVWEKPFRFHPEHFLDAQGHFVKPE 409
Query: 137 KTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGE 177
+ F AG+R C G A + L+Q F +++ G+
Sbjct: 410 AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 77 HMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLY 136
HMT +R E+ G + I G + + L+S + E WE P + PE FLD Q
Sbjct: 354 HMT-SRDIEVQG--FRIPKGTTLITNLSSV-LKDEAVWEKPFRFHPEHFLDAQGHFVKPE 409
Query: 137 KTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGE 177
+ F AG+R C G A + L+Q F +++ G+
Sbjct: 410 AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQ 450
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114
+P P LP+IGN+LQ+ K + T +++YGP++++ G ++VL+ + KE
Sbjct: 12 LPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 71
Query: 115 ENPEEW 120
+ EE+
Sbjct: 72 DLGEEF 77
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLD-GQNDPADLYKTMAFGAGKRVCA 149
Y I G + +I L S + K++ NPE + P FLD G N Y M F AGKR+C
Sbjct: 362 YLIPKGTTILISLTSV-LHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICV 419
Query: 150 GSLQASLIACTAIGRLVQEF 169
G A + + ++Q F
Sbjct: 420 GEALAGMELFLFLTSILQNF 439
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAG 150
YSI G + + L S EK W +PE + PERFLD A + F G+R C G
Sbjct: 366 YSIPKGTTVITNLYSVHF-DEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLG 424
Query: 151 SLQASLIACTAIGRLVQEFKWNL 173
A + L+Q F +
Sbjct: 425 EHLARMEMFLFFTALLQRFHLHF 447
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKE 111
PH+ + +++YG I+S+ G S +VLN DV KE
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKE 71
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 56 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWE 115
P P LP+IGN+LQ+ K + T +++YGP++++ G ++VL+ + KE +
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 116 NPEEW 120
EE+
Sbjct: 71 LGEEF 75
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLD-GQNDPADLYKTMAFGAGKRVCA 149
Y I G + +I L S + K++ NPE + P FLD G N Y M F AGKR+C
Sbjct: 360 YLIPKGTTILISLTSV-LHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICV 417
Query: 150 GSLQASLIACTAIGRLVQEF 169
G A + + ++Q F
Sbjct: 418 GEALAGMELFLFLTSILQNF 437
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAG 150
YSI G + + L S EK W +PE + PERFLD A + F G+R C G
Sbjct: 366 YSIPKGTTVITNLYSVHF-DEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLG 424
Query: 151 SLQASLIACTAIGRLVQEFKWNL 173
A + L+Q F +
Sbjct: 425 EHLARMEMFLFFTALLQRFHLHF 447
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKE 111
PH+ + +++YG I+S+ G S +VLN DV KE
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKE 71
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 112 KQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
K W PE++ PERF D D Y FG+G R C G A + A+ R++Q F +
Sbjct: 384 KYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 443
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 112 KQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
K W PE++ PERF D D Y FG+G R C G A + A+ R++Q F +
Sbjct: 386 KYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 445
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 112 KQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
K W PE++ PERF D D Y FG+G R C G A + A+ R++Q F +
Sbjct: 385 KYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 444
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 114 WENPEEWQPERFL--DGQ--NDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEF 169
WE+P E++PERFL DG N P K M FG GKR C G + A + L+Q+
Sbjct: 397 WEDPSEFRPERFLTADGTAINKPLS-EKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQL 455
Query: 170 KWNLREGEEESVDTV-GLT 187
++++ G + + + GLT
Sbjct: 456 EFSVPPGVKVDLTPIYGLT 474
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 56 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKE---K 112
P P PL+G++L L K PH+ +R ++ YG + I+ G++ ++VL+ D ++ +
Sbjct: 18 PPEPWGWPLLGHVLTLG-KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 113 QWEN----PEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIA 158
Q ++ P+ + DGQ+ + A +R+ +L IA
Sbjct: 77 QGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIA 126
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 56 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKE 111
P P PLIG++L L K PH+ +R ++ YG + I+ G++ ++VL+ D ++
Sbjct: 13 PPGPWGWPLIGHMLTLG-KNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 67
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 111 EKQWENPEEWQPERFL--DGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQE 168
+K W NP E+ PERFL DG D K + FG GKR C G A + L+Q
Sbjct: 391 QKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQR 450
Query: 169 FKWNLREG 176
++++ G
Sbjct: 451 VEFSVPLG 458
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 114 WENPEEWQPERFL-DGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKWN 172
+ +PE++ PERF DG + + FG G R C G A L RL+Q+F W
Sbjct: 356 YPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWT 415
Query: 173 LREGE 177
L G+
Sbjct: 416 LLPGQ 420
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 111 EKQWENPEEWQPERFLD--GQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQE 168
EK+W P+++ PERFL+ G + + FGAG R C G + A + L+Q
Sbjct: 385 EKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQR 444
Query: 169 FKWNL-REGEEESVDTVGLTTHKLNPFHAIIRPR 201
F + +G+ S++ + ++ F I+ R
Sbjct: 445 FDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIKVR 478
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 62 LPLIGNLLQL-KEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKE 111
LPL+G+L L + H F + + YGPIYS++ G + +++ +AKE
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKE 66
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + M G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 335 YAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFK-- 392
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 56 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLN 104
P P PLIGN + + H++F R A YG ++ I+ G+ ++VLN
Sbjct: 11 PPGPFAWPLIGNAAAVGQAA-HLSFARLARRYGDVFQIRLGSCPIVVLN 58
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 113 QWENPEEWQPERFL--DGQNDPADLYKTMAFGAGKRVCAG 150
+W NPE + P RFL DG + + M F GKR C G
Sbjct: 393 KWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIG 432
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
P + + + G Y ++ G M+++ K ++ EE++PERF + P
Sbjct: 331 PFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 136 YKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
+K FG G+R C G A A +G +++ F +
Sbjct: 391 FK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFK-- 392
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 340 YAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 397
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 398 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 429
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 392
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 392
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGKQFALHEATLVLGMMLKHFDF 423
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 392
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 337 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 394
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 395 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 337 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 394
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 395 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 337 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 394
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 395 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACEGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 392
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 393 PFGNGQRACPGQQFALHEATLVLGMMLKHFDF 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 335 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 392
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 393 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
FG G+R C G A A +G +++ F +
Sbjct: 392 PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 114 WENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKWNL 173
+ +P+++ P R+L D ++ + FG G R C G A L + +++ FK +
Sbjct: 390 FSSPDKFDPTRWLSKDKDLIH-FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM 448
Query: 174 RE-GEEESVDTVGLTTHKLNPFHAIIRP 200
+ G+ +++ + LT K P + RP
Sbjct: 449 QHIGDVDTIFNLILTPDK--PIFLVFRP 474
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 91 YSIKTGASSMIVLNSADV-AKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCA 149
Y++ G +++ LN+ + + E +E+ +++PER+L + + + + FG GKR+C
Sbjct: 375 YALPKG--TVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKK-INPFAHLPFGIGKRMCI 431
Query: 150 GSLQASLIACTAIGRLVQEFKWNLREGEEESVDTVGL 186
G A L A+ ++Q K+++ + E V+ + L
Sbjct: 432 GRRLAELQLHLALCWIIQ--KYDIVATDNEPVEMLHL 466
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 55 VPEVPG--RLPLIGNLLQL----KEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNS 105
V ++PG PL+G+LL++ KK H T + + YG I+ +K G+ + L S
Sbjct: 23 VTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGS 79
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
+G G+R C G A A +G +++ F +
Sbjct: 392 PYGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 44 QRMELAVNLPPVP-EVPGRLPLIGNLLQ--LKEKKPHMTFTRWAEMYGPI--YSIKTGAS 98
Q+ NLPP+ + L L+ ++ L+ + P M R A + Y+I G
Sbjct: 293 QKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPG-H 351
Query: 99 SMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPA--DLYKTMAFGAGKRVCAGSLQASL 156
+ V + + + W ++ P+R+L Q++PA + + + FGAG+ C G A +
Sbjct: 352 QVCVSPTVNQRLKDSWVERLDFNPDRYL--QDNPASGEKFAYVPFGAGRHRCIGENFAYV 409
Query: 157 IACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRPRN 204
T +++ ++++L +G TV TT P + +IR + R+
Sbjct: 410 QIKTIWSTMLRLYEFDLIDG---YFPTVNYTTMIHTPENPVIRYKRRS 454
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 88 GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRV 147
G Y ++ G M+++ K ++ EE++PERF + P +K +G G+R
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK--PWGNGQRA 399
Query: 148 CAGSLQASLIACTAIGRLVQEFKW 171
C G A A +G +++ F +
Sbjct: 400 CIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-- 391
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
G G+R C G A A +G +++ F +
Sbjct: 392 PHGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 105 SADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGR 164
S V + + + E ++PERFL+ + P+ Y FG G+R+C G A L +
Sbjct: 295 SPYVTQRLHFPDGEAFRPERFLEERGTPSGRY--FPFGLGQRLCLGRDFALLEGPIVLRA 352
Query: 165 LVQEFKWN 172
+ F+ +
Sbjct: 353 FFRRFRLD 360
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
PH+ T+ G Y I ++L++A + +E P+ + P+ FLD
Sbjct: 349 PHIV-TQHTSFRG--YIIPKDTEVFLILSTA-LHDPHYFEKPDAFNPDHFLDANGALKKT 404
Query: 136 YKTMAFGAGKRVCAG 150
+ F GKR+C G
Sbjct: 405 EAFIPFSLGKRICLG 419
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 67 NLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120
NLLQ+ + +F R+ E YG ++++ G +++L + +E + E +
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAF 76
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 80 FTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTM 139
+ + + G Y ++ G M+++ K ++ EE++PERF + P +K
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPA 393
Query: 140 AFGAGKRVCAGSLQASLIACTAIGRLVQEFKW 171
G G+R C G A A +G +++ F +
Sbjct: 394 --GNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 91 YSIKTGASSMIVLNSADVAKE-KQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCA 149
Y I GA I+ + + ++ K +++ E+ P+R+L + Y F AGKR C
Sbjct: 354 YRIPAGAD--IIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCP 411
Query: 150 GSLQASLIACTAI-GRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRPR 203
S S+ T I L ++++ G ++V VG+T L P ++RP R
Sbjct: 412 -SDHFSMAQLTLITAALATKYRFEQVAGSNDAV-RVGIT---LRPHDLLVRPVAR 461
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 79 TFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKT 138
T TR E+ G +I G ++ L SA+ ++W++P+ + R G
Sbjct: 304 TTTRDVELAG--ATIGEGEKVLMFLGSAN-RDPRRWDDPDRYDITRKTSGH--------- 351
Query: 139 MAFGAGKRVCAGSLQASL---IACTAIGRLV 166
+ FG+G +C G L A L + A+ R V
Sbjct: 352 VGFGSGVHMCVGQLVARLEGEVVLAALARKV 382
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 118 EEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKWN 172
E +QPERFL + P+ Y FG G+R+C G A L + + F+ +
Sbjct: 308 EAFQPERFLAERGTPSGRY--FPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLD 360
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 54 PVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTG-ASSMIVLNSADVAKEK 112
P P G L L + K H+ + + YGPIY K G S+ V++ DVA
Sbjct: 9 PSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLF 68
Query: 113 QWENPEEWQPERFL 126
+ E P PERFL
Sbjct: 69 KSEGP---NPERFL 79
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 54 PVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTG-ASSMIVLNSADVAKEK 112
P P G L L + K H+ + + YGPIY K G S+ V++ DVA
Sbjct: 12 PSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLF 71
Query: 113 QWENPEEWQPERFL 126
+ E P PERFL
Sbjct: 72 KSEGP---NPERFL 82
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 79 TFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKT 138
T TR E+ G + I G ++ L SA+ ++W +P+ + R G
Sbjct: 302 TTTREVELGGAV--IGEGEKVLMFLGSAN-RDPRRWSDPDLYDITRKTSGH--------- 349
Query: 139 MAFGAGKRVCAGSLQASL---IACTAIGRLV 166
+ FG+G +C G L A L + +A+ R V
Sbjct: 350 VGFGSGVHMCVGQLVARLEGEVMLSALARKV 380
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 111 EKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
E+ + NP W PER D + D A + FGAG C G A L T + +E+
Sbjct: 377 EEAFPNPRLWDPER--DEKVDGA----FIGFGAGVHKCIGQKFALLQVKTILATAFREYD 430
Query: 171 WNLREGE 177
+ L E
Sbjct: 431 FQLLRDE 437
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 111 EKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
E+ + NP W PER D + D A + FGAG C G A L T + +E+
Sbjct: 362 EEAFPNPRLWDPER--DEKVDGA----FIGFGAGVHKCIGQKFALLQVKTILATAFREYD 415
Query: 171 WNLREGE 177
+ L E
Sbjct: 416 FQLLRDE 422
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 111 EKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
E+ + NP W PER D + D A + FGAG C G A L T + +E+
Sbjct: 368 EEAFPNPRLWDPER--DEKVDGA----FIGFGAGVHKCIGQKFALLQVKTILATAFREYD 421
Query: 171 WNLREGE 177
+ L E
Sbjct: 422 FQLLRDE 428
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 91 YSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAG 150
Y +K G + I+LN + + + + P E+ E F +N P ++ FG G R CAG
Sbjct: 386 YPVKKGTN--IILNIGRMHRLEFFPKPNEFTLENF--AKNVPYRYFQ--PFGFGPRGCAG 439
Query: 151 SLQASLIACTAIGRLVQEFKWNLREGE-EESVDTV-GLTTH---KLNPFHAIIRPR 201
A ++ + L++ F +G+ ES+ + L+ H N I PR
Sbjct: 440 KYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPR 495
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 100 MIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQA 154
++VL A ++++ P+++ ER DP +M+FGAG R C GS A
Sbjct: 304 VVVLAGAANRDPRRYDRPDDFDIER------DPV---PSMSFGAGMRYCLGSYLA 349
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
Query: 111 EKQWENPEEWQPER---FLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQ 167
E+ + NP EW PER +DG FGAG C G L T + +++
Sbjct: 363 EEAFPNPREWNPERNMKLVDG--------AFCGFGAGVHKCIGEKFGLLQVKTVLATVLR 414
Query: 168 EFKWNL 173
++ + L
Sbjct: 415 DYDFEL 420
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Query: 139 MAFGAGKRVCAGSLQASLIACTAIGRLVQ--------EFKWNLR 174
++FG G VC GS A L A AI L+Q +F+W R
Sbjct: 335 LSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWRYR 378
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 131 DPADLYKT------MAFGAGKRVCAGSLQASLIACTAIGRLVQEFK 170
D DL+K +AFG G +C G+ A L A A+ ++ FK
Sbjct: 272 DEPDLFKIGRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3QSJ|A Chain A, Crystal Structure Of Nudix Hydrolase From Alicyclobacillus
Acidocaldarius
Length = 232
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 125 FLDGQNDPADL-YKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKWNL--REGEEESV 181
F G DP+D AFG + VCA +A TA+ +E W L R+GE
Sbjct: 44 FPGGAADPSDAEXAKRAFG--RPVCAEDDDDPALAVTALRETAEEIGWLLAVRDGEGTKX 101
Query: 182 DT 183
DT
Sbjct: 102 DT 103
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 93 IKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADL 135
K G S ++ L + + W++P+E++PERF + + + D+
Sbjct: 308 FKKGTSVLLDLYGTN-HDPRLWDHPDEFRPERFAEREENLFDM 349
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
pdb|2IK2|B Chain B, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
Length = 286
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 114 WENPEEWQPERFLDGQNDPADLY---KTMAF-GAGKRVCAGSLQASL 156
WE+P PE G+NDP D+ +T+A+ G K+V A + A L
Sbjct: 100 WEDPNVSHPETKAVGENDPIDVLEIGETIAYTGQVKQVKALGIMALL 146
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,617,536
Number of Sequences: 62578
Number of extensions: 207259
Number of successful extensions: 614
Number of sequences better than 100.0: 106
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 498
Number of HSP's gapped (non-prelim): 136
length of query: 204
length of database: 14,973,337
effective HSP length: 94
effective length of query: 110
effective length of database: 9,091,005
effective search space: 1000010550
effective search space used: 1000010550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)