Query 028744
Match_columns 204
No_of_seqs 147 out of 1331
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 16:18:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028744.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028744hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 2.4E-36 5.3E-41 240.1 11.6 195 6-202 291-499 (499)
2 KOG0157 Cytochrome P450 CYP4/C 100.0 1E-33 2.2E-38 229.9 12.2 194 7-202 289-496 (497)
3 PLN02169 fatty acid (omega-1)- 100.0 1.1E-33 2.4E-38 230.4 11.4 191 7-201 299-499 (500)
4 PLN03195 fatty acid omega-hydr 100.0 1.7E-32 3.7E-37 224.6 12.3 194 7-202 290-516 (516)
5 PLN02738 carotene beta-ring hy 100.0 1.5E-32 3.2E-37 228.0 11.4 195 7-203 389-596 (633)
6 KOG0159 Cytochrome P450 CYP11/ 100.0 2.1E-32 4.5E-37 214.5 11.2 191 10-202 317-518 (519)
7 PTZ00404 cytochrome P450; Prov 100.0 4E-32 8.6E-37 220.8 11.6 187 9-201 283-482 (482)
8 PLN02655 ent-kaurene oxidase 100.0 4.6E-32 1E-36 219.5 11.3 196 7-203 260-465 (466)
9 PLN02394 trans-cinnamate 4-mon 100.0 6.4E-32 1.4E-36 220.7 11.6 193 8-202 292-502 (503)
10 PLN02290 cytokinin trans-hydro 100.0 5.7E-32 1.2E-36 221.6 11.2 193 7-203 314-516 (516)
11 PLN02500 cytochrome P450 90B1 100.0 5.4E-32 1.2E-36 220.4 10.9 190 7-200 277-488 (490)
12 PLN02971 tryptophan N-hydroxyl 100.0 7E-32 1.5E-36 221.9 11.6 194 7-202 325-534 (543)
13 PLN02426 cytochrome P450, fami 100.0 8.6E-32 1.9E-36 219.2 10.7 195 8-203 292-501 (502)
14 PLN00168 Cytochrome P450; Prov 100.0 1.5E-31 3.2E-36 219.1 11.8 196 7-203 304-518 (519)
15 PLN00110 flavonoid 3',5'-hydro 100.0 1.6E-31 3.4E-36 218.1 11.5 195 7-202 287-497 (504)
16 PLN02183 ferulate 5-hydroxylas 100.0 1.6E-31 3.5E-36 218.7 11.6 196 6-202 301-512 (516)
17 PF00067 p450: Cytochrome P450 100.0 1.2E-31 2.6E-36 215.5 9.0 191 6-198 259-463 (463)
18 PLN03234 cytochrome P450 83B1; 100.0 4.3E-31 9.4E-36 215.6 11.6 195 6-201 285-498 (499)
19 PLN02774 brassinosteroid-6-oxi 100.0 5.5E-31 1.2E-35 213.1 10.7 188 7-200 262-462 (463)
20 KOG0684 Cytochrome P450 [Secon 100.0 6.3E-31 1.4E-35 202.2 9.4 196 6-202 270-485 (486)
21 PLN03141 3-epi-6-deoxocathaste 100.0 5.7E-31 1.2E-35 212.5 9.7 189 8-204 250-452 (452)
22 KOG0156 Cytochrome P450 CYP2 s 100.0 8.7E-31 1.9E-35 210.4 10.7 192 8-202 285-488 (489)
23 PLN02687 flavonoid 3'-monooxyg 100.0 1.4E-30 2.9E-35 213.4 11.1 195 7-202 295-509 (517)
24 PLN03018 homomethionine N-hydr 100.0 2.5E-30 5.4E-35 211.9 12.1 194 7-202 312-524 (534)
25 PLN03112 cytochrome P450 famil 100.0 3.9E-30 8.4E-35 210.7 12.4 195 7-202 294-508 (514)
26 PLN02936 epsilon-ring hydroxyl 100.0 3.9E-30 8.4E-35 209.3 12.1 194 7-202 276-482 (489)
27 PLN02302 ent-kaurenoic acid ox 100.0 3.3E-30 7.1E-35 210.0 10.9 191 7-203 285-489 (490)
28 PLN02966 cytochrome P450 83A1 100.0 3.4E-30 7.4E-35 210.4 11.0 170 7-177 287-471 (502)
29 PLN02196 abscisic acid 8'-hydr 100.0 5.2E-30 1.1E-34 207.3 10.7 188 7-201 262-462 (463)
30 PLN02987 Cytochrome P450, fami 100.0 7.9E-30 1.7E-34 206.3 11.2 192 7-202 265-469 (472)
31 COG2124 CypX Cytochrome P450 [ 99.9 1.5E-25 3.3E-30 178.5 9.2 171 7-201 234-410 (411)
32 PLN02648 allene oxide synthase 99.9 6.8E-24 1.5E-28 171.5 8.2 146 30-178 295-464 (480)
33 KOG0156 Cytochrome P450 CYP2 s 98.8 2.5E-08 5.4E-13 81.2 7.7 68 50-120 25-92 (489)
34 PLN02196 abscisic acid 8'-hydr 97.4 0.0004 8.7E-09 56.8 6.2 70 54-123 35-104 (463)
35 PLN02971 tryptophan N-hydroxyl 97.3 0.0012 2.6E-08 55.2 8.0 65 56-120 59-125 (543)
36 PLN03234 cytochrome P450 83B1; 97.1 0.0035 7.6E-08 51.8 8.9 64 57-120 31-94 (499)
37 PLN02655 ent-kaurene oxidase 97.1 0.001 2.2E-08 54.5 5.3 63 58-120 3-65 (466)
38 PLN03112 cytochrome P450 famil 97.0 0.0044 9.6E-08 51.4 8.2 66 55-121 33-98 (514)
39 PLN02290 cytokinin trans-hydro 97.0 0.0037 8E-08 51.9 7.7 62 55-116 43-122 (516)
40 PLN02687 flavonoid 3'-monooxyg 96.9 0.0037 8E-08 52.0 6.8 64 56-120 36-99 (517)
41 PTZ00404 cytochrome P450; Prov 96.8 0.0059 1.3E-07 50.2 7.9 64 56-120 31-94 (482)
42 PLN00110 flavonoid 3',5'-hydro 96.8 0.0063 1.4E-07 50.5 7.9 67 50-120 30-96 (504)
43 PLN02183 ferulate 5-hydroxylas 96.7 0.0062 1.3E-07 50.7 6.7 64 56-120 38-101 (516)
44 PLN02500 cytochrome P450 90B1 96.5 0.0054 1.2E-07 50.6 5.6 65 56-120 40-108 (490)
45 PLN02394 trans-cinnamate 4-mon 96.5 0.014 3E-07 48.4 8.0 64 57-120 33-96 (503)
46 PLN02774 brassinosteroid-6-oxi 96.5 0.0044 9.5E-08 50.8 4.8 64 58-122 35-98 (463)
47 PLN02966 cytochrome P450 83A1 96.5 0.008 1.7E-07 49.8 6.4 64 57-120 32-95 (502)
48 PLN02987 Cytochrome P450, fami 96.4 0.0085 1.8E-07 49.3 6.0 65 56-120 32-100 (472)
49 PLN00168 Cytochrome P450; Prov 96.3 0.024 5.2E-07 47.2 7.9 63 58-120 39-103 (519)
50 PF00067 p450: Cytochrome P450 96.3 0.006 1.3E-07 49.1 4.2 64 57-120 2-66 (463)
51 PLN02302 ent-kaurenoic acid ox 96.1 0.057 1.2E-06 44.5 9.5 65 55-120 43-113 (490)
52 PLN03141 3-epi-6-deoxocathaste 96.1 0.0073 1.6E-07 49.3 4.1 65 57-121 10-78 (452)
53 KOG0158 Cytochrome P450 CYP3/C 95.4 0.082 1.8E-06 43.6 7.4 66 55-120 32-98 (499)
54 PLN03018 homomethionine N-hydr 94.6 0.29 6.2E-06 41.1 8.6 65 56-120 42-108 (534)
55 KOG0684 Cytochrome P450 [Secon 93.6 0.31 6.8E-06 39.5 6.6 54 60-114 38-91 (486)
56 PLN03195 fatty acid omega-hydr 93.4 0.38 8.3E-06 40.1 7.2 61 58-120 34-97 (516)
57 PLN02936 epsilon-ring hydroxyl 90.9 0.39 8.4E-06 39.8 4.4 61 60-120 18-82 (489)
58 PLN02169 fatty acid (omega-1)- 89.0 2.4 5.2E-05 35.3 7.6 64 55-120 32-102 (500)
59 KOG0157 Cytochrome P450 CYP4/C 86.8 3.1 6.7E-05 34.7 7.0 58 56-113 37-96 (497)
60 PLN02738 carotene beta-ring hy 80.0 2.5 5.4E-05 36.4 3.9 45 76-120 153-197 (633)
61 KOG0159 Cytochrome P450 CYP11/ 63.0 8.6 0.00019 32.1 3.1 58 58-116 54-115 (519)
62 PLN02648 allene oxide synthase 60.8 10 0.00022 31.6 3.2 55 55-109 18-84 (480)
63 KOG3262 H/ACA small nucleolar 56.4 21 0.00045 25.4 3.6 63 61-129 75-142 (215)
64 PF08492 SRP72: SRP72 RNA-bind 54.7 5.1 0.00011 22.8 0.4 9 121-129 44-52 (59)
65 PF09201 SRX: SRX; InterPro: 39.6 27 0.00058 23.6 2.0 24 145-168 17-40 (148)
66 KOG3302 TATA-box binding prote 32.8 16 0.00034 26.2 0.2 40 112-151 44-84 (200)
67 KOG3506 40S ribosomal protein 24.1 35 0.00076 19.0 0.5 10 140-149 13-22 (56)
68 PF11227 DUF3025: Protein of u 22.7 39 0.00084 24.8 0.7 16 109-124 196-211 (212)
69 cd04518 TBP_archaea archaeal T 21.6 33 0.00072 24.3 0.2 34 118-151 29-63 (174)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-36 Score=240.11 Aligned_cols=195 Identities=21% Similarity=0.247 Sum_probs=156.8
Q ss_pred HHHHHHHhcccccchhhhHH-HHHHHHHH-HHHHHHHHHHHHhhhhcCCC----CCCCCCCCCccccccccccc--cCCc
Q 028744 6 YVTQAFQEFQAVPFATSIAL-GTLSVFFF-LFFIRGFISRQRMELAVNLP----PVPEVPGRLPLIGNLLQLKE--KKPH 77 (204)
Q Consensus 6 ~~~~~~~~~~~~~~a~~~~~-~~~~~~~~-l~~~~~~~~~l~~E~~~~~~----~~~~~~~~~p~l~~~~~~~~--~~~~ 77 (204)
..++++.+++.++.||.+|+ ++++.++| |+.||++|+|+|+|++.+.+ .+.+...+|+|++.|++|.+ .++.
T Consensus 291 t~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~ 370 (499)
T KOG0158|consen 291 TDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPA 370 (499)
T ss_pred CHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCc
Confidence 36788999999999999998 55554445 99999999999999998733 34455689999999999644 4444
Q ss_pred hhhHHHhh-hcC-C-eEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHHH
Q 028744 78 MTFTRWAE-MYG-P-IYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQA 154 (204)
Q Consensus 78 ~~~~~~~~-~~g-~-~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~a 154 (204)
....+.+. .+. + ++.|++|+.+.|...+. |+||++|+||++|+||||.+++.+..++.+++|||.|+|.|+|.+||
T Consensus 371 ~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~al-H~Dp~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa 449 (499)
T KOG0158|consen 371 PFLNRECTKDYEIPGGFVIPKGTPVMIPTYAL-HHDPEYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFA 449 (499)
T ss_pred ccccceecCceecCCCeEeCCCCEEEeecccc-cCCcccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHH
Confidence 44444443 332 3 79999999655555555 59999999999999999998876667788999999999999999999
Q ss_pred HHHHHHHHHHhhhhceeeecCCCcccccee---cceecccCCeEEEEeeCC
Q 028744 155 SLIACTAIGRLVQEFKWNLREGEEESVDTV---GLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~ 202 (204)
++|+|+.++.++++|+++..+..... ... +..+.|.+++.+++++|.
T Consensus 450 ~mq~K~~L~~lL~~f~~~~~~~t~~~-~~~~~~~~~l~pk~gi~Lkl~~r~ 499 (499)
T KOG0158|consen 450 LMEAKLALAHLLRNFSFEVCPTTIIP-LEGDPKGFTLSPKGGIWLKLEPRD 499 (499)
T ss_pred HHHHHHHHHHHHhhCEEecCCcccCc-ccCCccceeeecCCceEEEEEeCC
Confidence 99999999999999999988743333 333 677889999999999984
No 2
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=1e-33 Score=229.92 Aligned_cols=194 Identities=23% Similarity=0.328 Sum_probs=152.3
Q ss_pred HHHHHHhcccccchhhhHH-HHHHHHH-HHHHHHHHHHHHHhhhhcCCCCCCC---CCC--CCccccccccc--cccCCc
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSVFF-FLFFIRGFISRQRMELAVNLPPVPE---VPG--RLPLIGNLLQL--KEKKPH 77 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~~~-~l~~~~~~~~~l~~E~~~~~~~~~~---~~~--~~p~l~~~~~~--~~~~~~ 77 (204)
.+++.+.+..+++||++|+ +++++++ +|+.||++|+++++|++..++.... ... +|+|+..++++ |+.+|.
T Consensus 289 ~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppv 368 (497)
T KOG0157|consen 289 DEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPV 368 (497)
T ss_pred HHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCC
Confidence 5668889999999999998 4444444 4889999999999999987753322 122 39999999996 444555
Q ss_pred hhhHHHhh---hcCCeEEEecCCeEEEEechHhhhhhhccC-CCCCccccccccCCCC-CCCcccccccCCccccCcchH
Q 028744 78 MTFTRWAE---MYGPIYSIKTGASSMIVLNSADVAKEKQWE-NPEEWQPERFLDGQND-PADLYKTMAFGAGKRVCAGSL 152 (204)
Q Consensus 78 ~~~~~~~~---~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~-~~~~F~P~R~~~~~~~-~~~~~~~~~fg~G~~~C~g~~ 152 (204)
....+.+. +++++|.||+|+.+++.+...+ +++.+|. ||++|+|+||.++... ..++++|+|||+|+|.|+|++
T Consensus 369 p~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~-r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~ 447 (497)
T KOG0157|consen 369 PLVARKATKDVKLPGGYTIPKGTNVLISIYALH-RDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQK 447 (497)
T ss_pred chhhcccCCCeEcCCCcEeCCCCEEEEehHHhc-cCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHH
Confidence 55544333 3446799999986666665554 6666665 9999999999975433 456789999999999999999
Q ss_pred HHHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCC
Q 028744 153 QASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 153 ~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
||++|++++++.++++|+++++.+.. .......+++|.++++|++++|.
T Consensus 448 fA~lemKv~l~~ll~~f~~~~~~~~~-~~~~~~~~l~~~~gl~v~~~~r~ 496 (497)
T KOG0157|consen 448 FAMLEMKVVLAHLLRRFRIEPVGGDK-PKPVPELTLRPKNGLKVKLRPRG 496 (497)
T ss_pred HHHHHHHHHHHHHHHheEEEecCCCC-ceeeeEEEEEecCCeEEEEEeCC
Confidence 99999999999999999999988754 34456788999999999999996
No 3
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=1.1e-33 Score=230.39 Aligned_cols=191 Identities=16% Similarity=0.209 Sum_probs=145.7
Q ss_pred HHHHHHhcccccchhhhHH-HHHHHHHH-HHHHHHHHHHHHhhhhcCCCCCCCCCCCCcccccccccc--ccCCchhhHH
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSVFFF-LFFIRGFISRQRMELAVNLPPVPEVPGRLPLIGNLLQLK--EKKPHMTFTR 82 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~~~~-l~~~~~~~~~l~~E~~~~~~~~~~~~~~~p~l~~~~~~~--~~~~~~~~~~ 82 (204)
.+++.+++..+++||++|+ ++++++++ |+.||++|+++++|++... +.++..++||+.++++|. +.++.....+
T Consensus 299 ~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~--~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r 376 (500)
T PLN02169 299 DKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF--DNEDLEKLVYLHAALSESMRLYPPLPFNHK 376 (500)
T ss_pred hHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC--CHHHHhcCHHHHHHHHHHHhcCCCCCcCce
Confidence 3468888888999999988 44444444 9999999999999999865 345567999999999964 3444333322
Q ss_pred -Hhhh--cCCeEEEecCCeEEEEechHhhhhhhcc-CCCCCccccccccCCCCCC--CcccccccCCccccCcchHHHHH
Q 028744 83 -WAEM--YGPIYSIKTGASSMIVLNSADVAKEKQW-ENPEEWQPERFLDGQNDPA--DLYKTMAFGAGKRVCAGSLQASL 156 (204)
Q Consensus 83 -~~~~--~g~~~~i~~g~~~~v~~~~~~~~~~~~~-~~~~~F~P~R~~~~~~~~~--~~~~~~~fg~G~~~C~g~~~a~~ 156 (204)
..+. ..+++.||+|+.+.+.+... |+||.+| +||++|+||||++++.... ....++|||+|+|.|+|+++|.+
T Consensus 377 ~~~~d~~~~~G~~IpkGt~v~i~~~~i-hrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~ 455 (500)
T PLN02169 377 APAKPDVLPSGHKVDAESKIVICIYAL-GRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALL 455 (500)
T ss_pred ecCCCCCccCCEEECCCCEEEEcHHHh-hCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHH
Confidence 1222 22469999998544444444 4899999 8999999999997543322 25789999999999999999999
Q ss_pred HHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeC
Q 028744 157 IACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPR 201 (204)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (204)
|++++++.++++|++++.++... ......++.|++++++++++|
T Consensus 456 e~k~~la~ll~~f~~~~~~~~~~-~~~~~~~l~~~~gl~l~l~~~ 499 (500)
T PLN02169 456 QMKIVALEIIKNYDFKVIEGHKI-EAIPSILLRMKHGLKVTVTKK 499 (500)
T ss_pred HHHHHHHHHHHHCEEEEcCCCCc-ccccceEEecCCCEEEEEEeC
Confidence 99999999999999999765332 223456778899999999987
No 4
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=1.7e-32 Score=224.59 Aligned_cols=194 Identities=19% Similarity=0.190 Sum_probs=143.3
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC------------------------CCCCCC
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP------------------------VPEVPG 60 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~------------------------~~~~~~ 60 (204)
.+++.+++..+++||++|+ .++. ++++|+.||++|+++++|++...+. ...+..
T Consensus 290 ~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (516)
T PLN03195 290 DKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLG 369 (516)
T ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHh
Confidence 4667788888899999988 4444 4445999999999999999875431 122346
Q ss_pred CCcccccccccccc--CCchhhHH-Hhhh--cCCeEEEecCCeEEEEechHhhhhhhcc-CCCCCccccccccCCC-CCC
Q 028744 61 RLPLIGNLLQLKEK--KPHMTFTR-WAEM--YGPIYSIKTGASSMIVLNSADVAKEKQW-ENPEEWQPERFLDGQN-DPA 133 (204)
Q Consensus 61 ~~p~l~~~~~~~~~--~~~~~~~~-~~~~--~g~~~~i~~g~~~~v~~~~~~~~~~~~~-~~~~~F~P~R~~~~~~-~~~ 133 (204)
++||+.++++|.+| ++.....+ ..+. ..+++.||+|+.+.+.... .|+||.+| +||++|+||||+++.. ...
T Consensus 370 ~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~-~h~dp~~~g~dP~~F~PeRwl~~~~~~~~ 448 (516)
T PLN03195 370 KLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYS-MGRMEYNWGPDAASFKPERWIKDGVFQNA 448 (516)
T ss_pred cCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHh-hccChhhhccChhhcCCcccCCCCCcCCC
Confidence 89999999996444 44333322 2221 1246999999854444433 45899999 9999999999996432 223
Q ss_pred CcccccccCCccccCcchHHHHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCC
Q 028744 134 DLYKTMAFGAGKRVCAGSLQASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 134 ~~~~~~~fg~G~~~C~g~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
....++|||.|+|.|+|+++|++|++++++.++++|++++.++.... ......+.|..++++++++|+
T Consensus 449 ~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~r~ 516 (516)
T PLN03195 449 SPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVK-YRMMTILSMANGLKVTVSRRS 516 (516)
T ss_pred CCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcce-eeeeeEEecCCCEEEEEEeCC
Confidence 44679999999999999999999999999999999999987543222 223345678889999999985
No 5
>PLN02738 carotene beta-ring hydroxylase
Probab=99.98 E-value=1.5e-32 Score=227.96 Aligned_cols=195 Identities=21% Similarity=0.307 Sum_probs=144.9
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC---CCCCCCCCcccccccccccc--CCchh
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP---VPEVPGRLPLIGNLLQLKEK--KPHMT 79 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~---~~~~~~~~p~l~~~~~~~~~--~~~~~ 79 (204)
.+++.++++.+++||++|+ .++. .+++|+.||++|+++++|++.+.+. ..+...++||+.++++|.+| ++...
T Consensus 389 ~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~ 468 (633)
T PLN02738 389 SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPV 468 (633)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCHHHHccCHHHHHHHHHHHhcCCCccc
Confidence 4567777888889999888 4444 4445899999999999999987653 23345799999999996444 22222
Q ss_pred hHHHhh---hcCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCC---CCCCcccccccCCccccCcchHH
Q 028744 80 FTRWAE---MYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQN---DPADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 80 ~~~~~~---~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~---~~~~~~~~~~fg~G~~~C~g~~~ 153 (204)
..+.+. .+ ++|.||+|+.+.+ .....|+||.+|+||++|+|+||+.... .......++|||.|.|.|+|+++
T Consensus 469 ~~R~a~~d~~i-~gy~IPkGT~V~~-s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~l 546 (633)
T PLN02738 469 LIRRSLENDML-GGYPIKRGEDIFI-SVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMF 546 (633)
T ss_pred cceeeccCceE-CCEEECCCCEEEe-cHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHH
Confidence 211111 23 3699999984443 3334458999999999999999984321 12234689999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCCC
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRPR 203 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 203 (204)
|.+|++++++.|+++|++++..+.++.....+..+.|++++++++++|.+
T Consensus 547 A~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~ 596 (633)
T PLN02738 547 ASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTK 596 (633)
T ss_pred HHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCC
Confidence 99999999999999999999766432222235667788899999999964
No 6
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=2.1e-32 Score=214.51 Aligned_cols=191 Identities=20% Similarity=0.235 Sum_probs=146.0
Q ss_pred HHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCCCCC-----CCCCCcccccccccccc--CCchhh
Q 028744 10 AFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPPVPE-----VPGRLPLIGNLLQLKEK--KPHMTF 80 (204)
Q Consensus 10 ~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~~~~-----~~~~~p~l~~~~~~~~~--~~~~~~ 80 (204)
+..+++-+++||.+|+ .++. +++.|+.||+.|+++++|+..+++.+.. ...++||+++|+++.++ +.....
T Consensus 317 ~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~ 396 (519)
T KOG0159|consen 317 AKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN 396 (519)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc
Confidence 3344455667777777 3444 4444999999999999999998876322 23689999999997544 222222
Q ss_pred HHHhhh--cCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHHHHHHH
Q 028744 81 TRWAEM--YGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIA 158 (204)
Q Consensus 81 ~~~~~~--~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~a~~~~ 158 (204)
.+...+ .-++|.||+||.+.+..+.. .++|.+|++|++|+|+||+..+.+..++..++|||.|+|.|+||++|.+|+
T Consensus 397 ~R~l~~D~vL~gY~vPagT~V~l~~~~~-~r~~~~F~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl 475 (519)
T KOG0159|consen 397 GRVLPKDLVLSGYHVPAGTLVVLFLYVL-GRNPAYFPDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELEL 475 (519)
T ss_pred ccccchhceeccceecCCCeEEEeehhh-ccChhhCCCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHH
Confidence 222221 12579999998444444444 478999999999999999988766778899999999999999999999999
Q ss_pred HHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCC
Q 028744 159 CTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 159 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
.+++++++++|+++.....+ ......+++.|..++.++|++|.
T Consensus 476 ~llLarllr~f~V~~~~~~p-v~~~~~~il~P~~~l~f~f~~r~ 518 (519)
T KOG0159|consen 476 HLLLARLLRNFKVEFLHEEP-VEYVYRFILVPNRPLRFKFRPRN 518 (519)
T ss_pred HHHHHHHHHhcceeecCCCC-ccceeEEEEcCCCCcceeeeeCC
Confidence 99999999999999988633 23345678889999999999985
No 7
>PTZ00404 cytochrome P450; Provisional
Probab=99.98 E-value=4e-32 Score=220.83 Aligned_cols=187 Identities=19% Similarity=0.231 Sum_probs=140.4
Q ss_pred HHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCchh-
Q 028744 9 QAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPHMT- 79 (204)
Q Consensus 9 ~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~~~- 79 (204)
++.+++..+++||++|+ .+++++ +.|+.||++|+++++|++++... ..++..++||+.++++|.+| ++...
T Consensus 283 ~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~ 362 (482)
T PTZ00404 283 SILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFG 362 (482)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccc
Confidence 46677788889999888 444444 44999999999999999987643 34456799999999996443 33322
Q ss_pred hHHHhh---hcCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHHHHH
Q 028744 80 FTRWAE---MYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASL 156 (204)
Q Consensus 80 ~~~~~~---~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~a~~ 156 (204)
+.+.+. .+++++.||+|+. +++.....++||.+|+||++|+||||++.. ....++|||.|+|.|+|+++|++
T Consensus 363 ~~R~~~~d~~l~~g~~Ip~Gt~-V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----~~~~~~pFg~G~R~C~G~~~A~~ 437 (482)
T PTZ00404 363 LPRSTSNDIIIGGGHFIPKDAQ-ILINYYSLGRNEKYFENPEQFDPSRFLNPD----SNDAFMPFSIGPRNCVGQQFAQD 437 (482)
T ss_pred cceeccCCEEecCCeEECCCCE-EEeeHHHhhCCccccCCccccCccccCCCC----CCCceeccCCCCCCCccHHHHHH
Confidence 222222 2335799999984 444444446899999999999999998642 34689999999999999999999
Q ss_pred HHHHHHHHhhhhceeeecCCCccccc-eecceecccCCeEEEEeeC
Q 028744 157 IACTAIGRLVQEFKWNLREGEEESVD-TVGLTTHKLNPFHAIIRPR 201 (204)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r 201 (204)
|++++++.++++|+++..++.+.... ..+.... +.++++.+++|
T Consensus 438 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R 482 (482)
T PTZ00404 438 ELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR 482 (482)
T ss_pred HHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence 99999999999999998765432222 2345555 56799999887
No 8
>PLN02655 ent-kaurene oxidase
Probab=99.97 E-value=4.6e-32 Score=219.50 Aligned_cols=196 Identities=41% Similarity=0.546 Sum_probs=146.1
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC---CCCCCCCCcccccccccccc--CCchh
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP---VPEVPGRLPLIGNLLQLKEK--KPHMT 79 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~---~~~~~~~~p~l~~~~~~~~~--~~~~~ 79 (204)
.+++.+.+..+++||.+|+ .++. .+++|+.||++|+++++|++.+.+. ......++||++++++|.++ ++...
T Consensus 260 ~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~ 339 (466)
T PLN02655 260 DEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPL 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHhccCCCcCC
Confidence 4566777778888999887 4444 4445999999999999999887653 22234689999999996444 33222
Q ss_pred h--HHHhhhc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHHHHH
Q 028744 80 F--TRWAEMY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASL 156 (204)
Q Consensus 80 ~--~~~~~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~a~~ 156 (204)
. +...+.. -+++.||+|+.+++ .....++|+.+|+||++|+|+||++.+........++|||.|+|.|+|+++|..
T Consensus 340 ~~~r~~~~d~~~~g~~ip~gt~v~~-~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~ 418 (466)
T PLN02655 340 LPPRFVHEDTTLGGYDIPAGTQIAI-NIYGCNMDKKRWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAML 418 (466)
T ss_pred CCCcccCCCcccCCEEECCCCEEEe-cHHHhcCCcccCCChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHH
Confidence 2 2222221 14699999984433 333445899999999999999999764333344689999999999999999999
Q ss_pred HHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCCC
Q 028744 157 IACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRPR 203 (204)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 203 (204)
+++++++.++++|++++.++..+.....++.+.+++++.+++++|.+
T Consensus 419 ~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 465 (466)
T PLN02655 419 IACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRGS 465 (466)
T ss_pred HHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecCC
Confidence 99999999999999999766443334446667788899999999964
No 9
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.97 E-value=6.4e-32 Score=220.68 Aligned_cols=193 Identities=21% Similarity=0.323 Sum_probs=139.5
Q ss_pred HHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCchh
Q 028744 8 TQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPHMT 79 (204)
Q Consensus 8 ~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~~~ 79 (204)
+++...+..+++||++|+ .++. .+++|+.||++|+++++|++.+.+. ......++||+.+|++|.+| ++...
T Consensus 292 ~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~ 371 (503)
T PLN02394 292 DNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPL 371 (503)
T ss_pred HHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCccc
Confidence 345555566678999888 4444 4455999999999999999987643 22234689999999996443 33222
Q ss_pred h-HHHhh---hcCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCC---CCCcccccccCCccccCcchH
Q 028744 80 F-TRWAE---MYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQND---PADLYKTMAFGAGKRVCAGSL 152 (204)
Q Consensus 80 ~-~~~~~---~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~---~~~~~~~~~fg~G~~~C~g~~ 152 (204)
. .+.+. .+ ++|.||+|+.+.+. ....|+|+.+|+||++|+||||++++.. ......++|||.|+|.|+|++
T Consensus 372 ~~~r~~~~d~~i-~g~~IP~Gt~V~~~-~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~ 449 (503)
T PLN02394 372 LVPHMNLEDAKL-GGYDIPAESKILVN-AWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGII 449 (503)
T ss_pred ccceecCCCccc-CCEEeCCCCEEEEc-hHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHH
Confidence 2 22222 12 46999999844333 3344589999999999999999865321 223468999999999999999
Q ss_pred HHHHHHHHHHHHhhhhceeeecCCCcc--ccceec-ceecccCCeEEEEeeCC
Q 028744 153 QASLIACTAIGRLVQEFKWNLREGEEE--SVDTVG-LTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 153 ~a~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~r~ 202 (204)
+|.+|++++++.++++|++.+.++... .....+ +.+..+.++.+.+.||+
T Consensus 450 ~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 502 (503)
T PLN02394 450 LALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS 502 (503)
T ss_pred HHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence 999999999999999999998766421 111232 45546668999999996
No 10
>PLN02290 cytokinin trans-hydroxylase
Probab=99.97 E-value=5.7e-32 Score=221.56 Aligned_cols=193 Identities=20% Similarity=0.235 Sum_probs=143.5
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC---CCCCCCCCcccccccccccc--CCchh
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP---VPEVPGRLPLIGNLLQLKEK--KPHMT 79 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~---~~~~~~~~p~l~~~~~~~~~--~~~~~ 79 (204)
.+++.+++..+++||++|+ .++. .+++|+.||++|+++++|++.+.+. ..++.+++||+.++++|.+| ++...
T Consensus 314 ~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~ 393 (516)
T PLN02290 314 LQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPATL 393 (516)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCccc
Confidence 4457777778889999888 4444 4444899999999999999987653 33345789999999996443 33322
Q ss_pred hHHHhhh-c-CCeEEEecCCeEEEEechHhhhhhhcc-CCCCCccccccccCCCCCCCcccccccCCccccCcchHHHHH
Q 028744 80 FTRWAEM-Y-GPIYSIKTGASSMIVLNSADVAKEKQW-ENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASL 156 (204)
Q Consensus 80 ~~~~~~~-~-g~~~~i~~g~~~~v~~~~~~~~~~~~~-~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~a~~ 156 (204)
..+.+.+ . -+++.||+|+.+.+.. ...++||.+| +||++|+||||++... .....++|||.|+|.|+|+++|.+
T Consensus 394 ~~R~~~~d~~i~g~~IP~Gt~V~~~~-~~~~rdp~~~~~dP~~F~PeRfl~~~~--~~~~~~~pFG~G~R~C~G~~lA~~ 470 (516)
T PLN02290 394 LPRMAFEDIKLGDLHIPKGLSIWIPV-LAIHHSEELWGKDANEFNPDRFAGRPF--APGRHFIPFAAGPRNCIGQAFAMM 470 (516)
T ss_pred cceeecCCeeECCEEECCCCEEEecH-HHhcCChhhhCCChhhcCccccCCCCC--CCCCeEecCCCCCCCCccHHHHHH
Confidence 2222221 1 1469999998433333 3335899999 7999999999995421 223579999999999999999999
Q ss_pred HHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCCC
Q 028744 157 IACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRPR 203 (204)
Q Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 203 (204)
|++++++.++++|++++.++.. ..........|.+++++++++|++
T Consensus 471 el~l~la~ll~~f~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~ 516 (516)
T PLN02290 471 EAKIILAMLISKFSFTISDNYR-HAPVVVLTIKPKYGVQVCLKPLNP 516 (516)
T ss_pred HHHHHHHHHHHhceEeeCCCcc-cCccceeeecCCCCCeEEEEeCCC
Confidence 9999999999999999876532 122235778899999999999963
No 11
>PLN02500 cytochrome P450 90B1
Probab=99.97 E-value=5.4e-32 Score=220.38 Aligned_cols=190 Identities=21% Similarity=0.227 Sum_probs=138.4
Q ss_pred HHHHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCC---------CCCCCCCCCcccccccccccc-
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLP---------PVPEVPGRLPLIGNLLQLKEK- 74 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~---------~~~~~~~~~p~l~~~~~~~~~- 74 (204)
.+++.+.+..+++||++|+ .++.++ ++|+.||++|+++++|++.+.. ++.++..++||+.++++|.+|
T Consensus 277 ~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl 356 (490)
T PLN02500 277 TEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRL 356 (490)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhc
Confidence 4567777788889999888 444444 4499999999999999986531 233456789999999996443
Q ss_pred -CCchhhHHHh-hhc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCC-------CCcccccccCCc
Q 028744 75 -KPHMTFTRWA-EMY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDP-------ADLYKTMAFGAG 144 (204)
Q Consensus 75 -~~~~~~~~~~-~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~-------~~~~~~~~fg~G 144 (204)
++.....+.+ +.. -++|.||+|+.+++..... ++||.+|+||++|+||||++++... .++..++|||.|
T Consensus 357 ~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~-hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G 435 (490)
T PLN02500 357 GNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAV-HLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGG 435 (490)
T ss_pred CCCccCeeeEeCCCceeCCEEECCCCEEEechhhc-ccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCC
Confidence 3322222212 111 1469999998544443333 5899999999999999999654211 234689999999
Q ss_pred cccCcchHHHHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEee
Q 028744 145 KRVCAGSLQASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRP 200 (204)
Q Consensus 145 ~~~C~g~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (204)
+|.|+|+++|.+|++++++.++++|++++.++... .. .. .+.+++++++++++
T Consensus 436 ~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~-~~-~~~~~~~l~~~~~~ 488 (490)
T PLN02500 436 PRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA-FP-FVDFPKGLPIRVRR 488 (490)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee-cc-cccCCCCceEEEEe
Confidence 99999999999999999999999999998776442 22 22 33456789999875
No 12
>PLN02971 tryptophan N-hydroxylase
Probab=99.97 E-value=7e-32 Score=221.91 Aligned_cols=194 Identities=16% Similarity=0.232 Sum_probs=142.9
Q ss_pred HHHHHHhcccccchhhhHH-HHHHH-HHHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCch
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSV-FFFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPHM 78 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~-~~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~~ 78 (204)
.+++.+.+..+++||.+|+ .++.+ +++|+.||++|+++++|++.+.+. ..++..++||++++++|.+| ++..
T Consensus 325 ~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~ 404 (543)
T PLN02971 325 ADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAA 404 (543)
T ss_pred HHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcc
Confidence 4667788888899999888 44444 444999999999999999987653 33456799999999996444 3322
Q ss_pred h-hHHHh-hhc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCC---CCCcccccccCCccccCcchH
Q 028744 79 T-FTRWA-EMY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQND---PADLYKTMAFGAGKRVCAGSL 152 (204)
Q Consensus 79 ~-~~~~~-~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~---~~~~~~~~~fg~G~~~C~g~~ 152 (204)
. +.+.+ +.. -++|.||+|+.+++.+... |+|+.+|+||++|+||||+++..+ ......++|||.|+|.|+|++
T Consensus 405 ~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~-~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~ 483 (543)
T PLN02971 405 FNLPHVALSDTTVAGYHIPKGSQVLLSRYGL-GRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPA 483 (543)
T ss_pred cCcceecCCCeeECCEEECCCCEEEECcHHh-cCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHH
Confidence 2 22222 221 1469999998544433343 589999999999999999975322 123467999999999999999
Q ss_pred HHHHHHHHHHHHhhhhceeeecCCCcc--ccceecceecccCCeEEEEeeCC
Q 028744 153 QASLIACTAIGRLVQEFKWNLREGEEE--SVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 153 ~a~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
+|..|++++++.++++|++++.++... .....+ .+..++++.+.+++|.
T Consensus 484 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 534 (543)
T PLN02971 484 LGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELRL 534 (543)
T ss_pred HHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeecC
Confidence 999999999999999999998765422 222334 4435568999999984
No 13
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.97 E-value=8.6e-32 Score=219.23 Aligned_cols=195 Identities=19% Similarity=0.194 Sum_probs=144.1
Q ss_pred HHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC-----CCCCCCCCcccccccccccc--CCch
Q 028744 8 TQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP-----VPEVPGRLPLIGNLLQLKEK--KPHM 78 (204)
Q Consensus 8 ~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~-----~~~~~~~~p~l~~~~~~~~~--~~~~ 78 (204)
+++.+++..+++||++|+ .++. .+++|+.||++|+++++|++.+.+. ..++..++||+.++++|.+| +|..
T Consensus 292 ~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~ 371 (502)
T PLN02426 292 KYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQ 371 (502)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCC
Confidence 456777888889999888 4444 4445899999999999999876543 22345789999999996443 3333
Q ss_pred hhHHHhh---hcCCeEEEecCCeEEEEechHhhhhhhcc-CCCCCccccccccCCC-CCCCcccccccCCccccCcchHH
Q 028744 79 TFTRWAE---MYGPIYSIKTGASSMIVLNSADVAKEKQW-ENPEEWQPERFLDGQN-DPADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 79 ~~~~~~~---~~g~~~~i~~g~~~~v~~~~~~~~~~~~~-~~~~~F~P~R~~~~~~-~~~~~~~~~~fg~G~~~C~g~~~ 153 (204)
...+.+. ...+++.||+|+.+.+..... ++|+.+| +||++|+||||+++.. .......++|||.|+|.|+|+++
T Consensus 372 ~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~-~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~ 450 (502)
T PLN02426 372 FDSKFAAEDDVLPDGTFVAKGTRVTYHPYAM-GRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEM 450 (502)
T ss_pred CcceeeccCCCcCCCcEECCCCEEEEchHHh-cCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHH
Confidence 2222222 122469999998544443333 4899999 9999999999987431 12334678999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccc-cceecceecccCCeEEEEeeCCC
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEES-VDTVGLTTHKLNPFHAIIRPRPR 203 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~ 203 (204)
|.+|++++++.++++|++++.++..+. ....+..+.|.+++++++++|..
T Consensus 451 A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~~ 501 (502)
T PLN02426 451 ALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERVR 501 (502)
T ss_pred HHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEccC
Confidence 999999999999999999986543222 22335678888999999999964
No 14
>PLN00168 Cytochrome P450; Provisional
Probab=99.97 E-value=1.5e-31 Score=219.12 Aligned_cols=196 Identities=24% Similarity=0.330 Sum_probs=143.2
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC-----CCCCCCCCcccccccccccc--CCc
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP-----VPEVPGRLPLIGNLLQLKEK--KPH 77 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~-----~~~~~~~~p~l~~~~~~~~~--~~~ 77 (204)
.+++.+++..+++||++|+ .++. .+++|+.||++|+++++|++.+... ..++..++||++++++|.++ ++.
T Consensus 304 ~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~ 383 (519)
T PLN00168 304 DDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPA 383 (519)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCC
Confidence 4567777788889999888 4444 4444899999999999999987642 22345689999999996544 332
Q ss_pred h-hhHHHh-hhc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCC------CCCCcccccccCCccccC
Q 028744 78 M-TFTRWA-EMY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQN------DPADLYKTMAFGAGKRVC 148 (204)
Q Consensus 78 ~-~~~~~~-~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~------~~~~~~~~~~fg~G~~~C 148 (204)
. .+.+.+ +.. -++|.||+|+.+.+.... .|+||.+|+||++|+|+||++... ...+...++|||.|+|.|
T Consensus 384 ~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~-~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C 462 (519)
T PLN00168 384 HFVLPHKAAEDMEVGGYLIPKGATVNFMVAE-MGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRIC 462 (519)
T ss_pred cccCCccCCCCccCCCEEECCCCEEEEChHH-HhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCC
Confidence 2 222222 111 146999999844433333 358999999999999999996421 112335799999999999
Q ss_pred cchHHHHHHHHHHHHHhhhhceeeecCCCcccc-ceecceecccCCeEEEEeeCCC
Q 028744 149 AGSLQASLIACTAIGRLVQEFKWNLREGEEESV-DTVGLTTHKLNPFHAIIRPRPR 203 (204)
Q Consensus 149 ~g~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~ 203 (204)
+|+++|.+|++++++.++++|++++.++..... ....+.+.+++++++++++|+-
T Consensus 463 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 518 (519)
T PLN00168 463 AGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT 518 (519)
T ss_pred CcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence 999999999999999999999999976543222 1234566677789999999963
No 15
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.97 E-value=1.6e-31 Score=218.07 Aligned_cols=195 Identities=23% Similarity=0.379 Sum_probs=144.8
Q ss_pred HHHHHHhcccccchhhhHH-HHHHH-HHHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCch
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSV-FFFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPHM 78 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~-~~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~~ 78 (204)
.+++..++..+++||++|+ .++.+ +++|+.||++|+++++|++.+... ..+...++||+.++++|.++ ++..
T Consensus 287 ~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~ 366 (504)
T PLN00110 287 LTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTP 366 (504)
T ss_pred HHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcc
Confidence 4667788888889999888 34444 444899999999999999986542 33445789999999996444 3322
Q ss_pred h-hHHHhh-h-cCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCC----CcccccccCCccccCcch
Q 028744 79 T-FTRWAE-M-YGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPA----DLYKTMAFGAGKRVCAGS 151 (204)
Q Consensus 79 ~-~~~~~~-~-~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~----~~~~~~~fg~G~~~C~g~ 151 (204)
. +.+.+. . .-++|.||+|+.+.+..... ++|+.+|+||++|+||||+++..... +...++|||.|+|.|+|+
T Consensus 367 ~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~-h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~ 445 (504)
T PLN00110 367 LNLPRVSTQACEVNGYYIPKNTRLSVNIWAI-GRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGT 445 (504)
T ss_pred cccccccCCCeeeCCEEECCCCEEEEeHHHh-cCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcH
Confidence 2 222222 1 11469999998544444443 58999999999999999996532211 235799999999999999
Q ss_pred HHHHHHHHHHHHHhhhhceeeecCCCcccc-ceecceecccCCeEEEEeeCC
Q 028744 152 LQASLIACTAIGRLVQEFKWNLREGEEESV-DTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 152 ~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~ 202 (204)
++|.+|++++++.++++|++++.++..... ...+..+.|+.++++.+++|+
T Consensus 446 ~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 497 (504)
T PLN00110 446 RMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL 497 (504)
T ss_pred HHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence 999999999999999999999877643222 234567778889999999995
No 16
>PLN02183 ferulate 5-hydroxylase
Probab=99.97 E-value=1.6e-31 Score=218.74 Aligned_cols=196 Identities=20% Similarity=0.256 Sum_probs=140.4
Q ss_pred HHHHHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCC----CCCCCCCCCcccccccccccc--CCc
Q 028744 6 YVTQAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLP----PVPEVPGRLPLIGNLLQLKEK--KPH 77 (204)
Q Consensus 6 ~~~~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~----~~~~~~~~~p~l~~~~~~~~~--~~~ 77 (204)
..+++.+.+..+++||++|+ .++.++ ++|+.||++|+++++|++++.. ++..+..++||+.++++|.+| ++.
T Consensus 301 ~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~ 380 (516)
T PLN02183 301 TRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPI 380 (516)
T ss_pred CHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCc
Confidence 34567777788889999888 444444 4499999999999999998764 233455789999999996443 333
Q ss_pred hhhHHHhh-hc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCC--CCcccccccCCccccCcchHH
Q 028744 78 MTFTRWAE-MY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDP--ADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 78 ~~~~~~~~-~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~--~~~~~~~~fg~G~~~C~g~~~ 153 (204)
....+.+. .. -+++.||+|+.+.+..... ++|+.+|+||++|+|+||++++... .+...++|||.|+|.|+|+++
T Consensus 381 p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~-hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~l 459 (516)
T PLN02183 381 PLLLHETAEDAEVAGYFIPKRSRVMINAWAI-GRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQL 459 (516)
T ss_pred cceeeeccCceeECCEEECCCCEEEEehhhh-cCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHH
Confidence 22222121 11 1469999998544444444 5899999999999999999654211 234689999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccc-c---ceecceecccCCeEEEEeeCC
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEES-V---DTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~r~ 202 (204)
|.+|++++++.++++|++++.++.... . ...+....+..++.+.+++|-
T Consensus 460 A~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 512 (516)
T PLN02183 460 GLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRL 512 (516)
T ss_pred HHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecCC
Confidence 999999999999999999987753211 1 122344334446777777773
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.97 E-value=1.2e-31 Score=215.51 Aligned_cols=191 Identities=22% Similarity=0.274 Sum_probs=139.4
Q ss_pred HHHHHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCCCCC----CCCCCCcccccccccc--ccCCc
Q 028744 6 YVTQAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLPPVP----EVPGRLPLIGNLLQLK--EKKPH 77 (204)
Q Consensus 6 ~~~~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~~~~----~~~~~~p~l~~~~~~~--~~~~~ 77 (204)
..+++...+..+++||.+++ .+++++ +.|+.||++|+++++|++.....+. ....++||+.++++|. ..++.
T Consensus 259 s~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~ 338 (463)
T PF00067_consen 259 SDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPV 338 (463)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 35677888888889999887 444444 4499999999999999998774322 2346899999999964 33444
Q ss_pred h-hhHHHhh---hcCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCC-CCCCcccccccCCccccCcchH
Q 028744 78 M-TFTRWAE---MYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQN-DPADLYKTMAFGAGKRVCAGSL 152 (204)
Q Consensus 78 ~-~~~~~~~---~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~-~~~~~~~~~~fg~G~~~C~g~~ 152 (204)
. .+.+.+. .. +++.||+|+.+.+ .....++|+.+|+||++|+|+||++.+. .......++|||.|.|.|+|++
T Consensus 339 ~~~~~R~~~~d~~l-~g~~ip~gt~v~~-~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 416 (463)
T PF00067_consen 339 PFSLPRVATEDVTL-GGYFIPKGTIVIV-SIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRN 416 (463)
T ss_dssp STEEEEEESSSEEE-TTEEEETTSEEEE-EHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHH
T ss_pred cccccccccccccc-ccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccchHHH
Confidence 4 3323222 22 3499999984333 3344458999999999999999998765 3456688999999999999999
Q ss_pred HHHHHHHHHHHHhhhhceeeecCCCccccc-eecceecccCCeEEEE
Q 028744 153 QASLIACTAIGRLVQEFKWNLREGEEESVD-TVGLTTHKLNPFHAII 198 (204)
Q Consensus 153 ~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 198 (204)
+|..|+++++++++++||+++.++...... .....+.|+.+++|.|
T Consensus 417 ~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (463)
T PF00067_consen 417 LAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF 463 (463)
T ss_dssp HHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred HHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence 999999999999999999999776553332 2224555666788765
No 18
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.97 E-value=4.3e-31 Score=215.59 Aligned_cols=195 Identities=16% Similarity=0.237 Sum_probs=140.6
Q ss_pred HHHHHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCc
Q 028744 6 YVTQAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPH 77 (204)
Q Consensus 6 ~~~~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~ 77 (204)
..+++.+++..+++||++|+ .++.++ ++|+.||++|+++++|++...+. ..++..++||++++++|.+| ++.
T Consensus 285 ~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~ 364 (499)
T PLN03234 285 THENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVI 364 (499)
T ss_pred CHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCc
Confidence 45678888888899999888 444444 44899999999999999987643 23345789999999996444 333
Q ss_pred hh-hHHHh-hhc-CCeEEEecCCeEEEEechHhhhhhhcc-CCCCCccccccccCCCC---CCCcccccccCCccccCcc
Q 028744 78 MT-FTRWA-EMY-GPIYSIKTGASSMIVLNSADVAKEKQW-ENPEEWQPERFLDGQND---PADLYKTMAFGAGKRVCAG 150 (204)
Q Consensus 78 ~~-~~~~~-~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~-~~~~~F~P~R~~~~~~~---~~~~~~~~~fg~G~~~C~g 150 (204)
.. +.+.+ +.. -+++.||+|+.+.+... ..++|+.+| +||++|+||||+++... ......++|||.|+|.|+|
T Consensus 365 ~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~-~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G 443 (499)
T PLN03234 365 PILLHRETIADAKIGGYDIPAKTIIQVNAW-AVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPA 443 (499)
T ss_pred cccCCcccCCCeeECCEEECCCCEEEEehH-hhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCC
Confidence 32 22222 211 14699999984444333 335899999 79999999999975422 1235679999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhceeeecCCCc-ccc---ceecceecccCCeEEEEeeC
Q 028744 151 SLQASLIACTAIGRLVQEFKWNLREGEE-ESV---DTVGLTTHKLNPFHAIIRPR 201 (204)
Q Consensus 151 ~~~a~~~~~~~~~~l~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~r 201 (204)
+++|.+|++++++.++++|++++.++.. +.. ...+....|++.+.+..++|
T Consensus 444 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (499)
T PLN03234 444 MHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH 498 (499)
T ss_pred hHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence 9999999999999999999999987532 111 13455555666666665554
No 19
>PLN02774 brassinosteroid-6-oxidase
Probab=99.97 E-value=5.5e-31 Score=213.06 Aligned_cols=188 Identities=14% Similarity=0.133 Sum_probs=138.3
Q ss_pred HHHHHHhcccccchhhhHH-HHHHH-HHHHHHHHHHHHHHHhhhhcCCCC-------CCCCCCCCcccccccccccc--C
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSV-FFFLFFIRGFISRQRMELAVNLPP-------VPEVPGRLPLIGNLLQLKEK--K 75 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~-~~~l~~~~~~~~~l~~E~~~~~~~-------~~~~~~~~p~l~~~~~~~~~--~ 75 (204)
.+++..++..+++||.+|+ .++.+ ++.|+.||++|+++++|++..... ..++..++||+.++++|.+| +
T Consensus 262 ~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P 341 (463)
T PLN02774 262 DEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLAT 341 (463)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCC
Confidence 4567777888888998887 44444 444899999999999999876431 23355789999999996443 3
Q ss_pred CchhhHHHhh-hc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHH
Q 028744 76 PHMTFTRWAE-MY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 76 ~~~~~~~~~~-~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~ 153 (204)
+.....+.+. .. -+++.||+|+.+++.... .++|+.+|+||++|+||||++++... ...++|||.|+|.|+|+++
T Consensus 342 ~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~-~~rdp~~~~dP~~F~PeRfl~~~~~~--~~~~lpFG~G~r~C~G~~~ 418 (463)
T PLN02774 342 IVNGVLRKTTQDMELNGYVIPKGWRIYVYTRE-INYDPFLYPDPMTFNPWRWLDKSLES--HNYFFLFGGGTRLCPGKEL 418 (463)
T ss_pred CCCCcccccCCCeeECCEEECCCCEEEEehHH-hcCCcccCCChhccCchhcCCCCcCC--CccccCcCCCCCcCCcHHH
Confidence 3322222222 11 146999999854444444 35899999999999999999654211 2368999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEee
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRP 200 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (204)
|.+|++++++.|+++|++++.++.+. .. ...+.|+++++++++|
T Consensus 419 A~~e~~~~la~Ll~~f~~~~~~~~~~-~~--~~~~~p~~g~~~~~~~ 462 (463)
T PLN02774 419 GIVEISTFLHYFVTRYRWEEVGGDKL-MK--FPRVEAPNGLHIRVSP 462 (463)
T ss_pred HHHHHHHHHHHHHHhceEEECCCCcc-cc--CCCCCCCCCceEEeee
Confidence 99999999999999999999776432 11 2345578899999875
No 20
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=6.3e-31 Score=202.23 Aligned_cols=196 Identities=20% Similarity=0.246 Sum_probs=152.3
Q ss_pred HHHHHHHhcccccchhhhHH--HHHHHHHHHHHHHHHHHHHHhhhhcCCCCC-----CCCCCCCccccccccc--cccCC
Q 028744 6 YVTQAFQEFQAVPFATSIAL--GTLSVFFFLFFIRGFISRQRMELAVNLPPV-----PEVPGRLPLIGNLLQL--KEKKP 76 (204)
Q Consensus 6 ~~~~~~~~~~~~~~a~~~~~--~~~~~~~~l~~~~~~~~~l~~E~~~~~~~~-----~~~~~~~p~l~~~~~~--~~~~~ 76 (204)
..+++....+++++||+.++ .++|.+++++.||+.++.+++|+.+++... .+.++.+|++.+|+++ |++.|
T Consensus 270 te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p 349 (486)
T KOG0684|consen 270 TEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPP 349 (486)
T ss_pred cHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCc
Confidence 34667777788889987666 555666779999999999999999877432 2235789999999995 55554
Q ss_pred chhhHH-HhhhcC-----CeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCC---CCc--ccccccCCcc
Q 028744 77 HMTFTR-WAEMYG-----PIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDP---ADL--YKTMAFGAGK 145 (204)
Q Consensus 77 ~~~~~~-~~~~~g-----~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~---~~~--~~~~~fg~G~ 145 (204)
...+.+ +.+.+. +-|.||+|..+.+++.- .|+||++|+||+.|+|+||++++... +.. +-++|||+|.
T Consensus 350 ~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~-~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr 428 (486)
T KOG0684|consen 350 AHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFL-LHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGR 428 (486)
T ss_pred hhhHHHhhccceeeccCCcceecCCCCEEEecccc-ccCCccccCChhhCChhhccCCCcccccccccccccccccCCCc
Confidence 444433 333221 24999999955555444 56999999999999999999776443 233 3459999999
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCC
Q 028744 146 RVCAGSLQASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 146 ~~C~g~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
+.|+|++||.+|++.++..++++||+++.+++.+..+...++..|..+++++.+.|.
T Consensus 429 ~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~ 485 (486)
T KOG0684|consen 429 HRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP 485 (486)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence 999999999999999999999999999999755555555678889999999999885
No 21
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.97 E-value=5.7e-31 Score=212.45 Aligned_cols=189 Identities=17% Similarity=0.119 Sum_probs=139.2
Q ss_pred HHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCC--------CCCCCCCCCcccccccccccc--C
Q 028744 8 TQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLP--------PVPEVPGRLPLIGNLLQLKEK--K 75 (204)
Q Consensus 8 ~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~--------~~~~~~~~~p~l~~~~~~~~~--~ 75 (204)
+++...+..+++||++|+ .+++ .+++++.||++|+++++|++.... +..++..++||+.++++|.+| +
T Consensus 250 ~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p 329 (452)
T PLN03141 250 DLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGN 329 (452)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccC
Confidence 456677777788898887 4444 444488999999999999865421 122234689999999996443 3
Q ss_pred CchhhHHHhh-hc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHH
Q 028744 76 PHMTFTRWAE-MY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 76 ~~~~~~~~~~-~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~ 153 (204)
+.....+.+. .. -++|.||+|+.+++.. ...++|+.+|+||++|+||||+++.. ....++|||.|.|.|+|+++
T Consensus 330 ~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~-~~~~~d~~~~~dP~~F~PeRfl~~~~---~~~~~~pFG~G~R~C~G~~l 405 (452)
T PLN03141 330 IINGVMRKAMKDVEIKGYLIPKGWCVLAYF-RSVHLDEENYDNPYQFNPWRWQEKDM---NNSSFTPFGGGQRLCPGLDL 405 (452)
T ss_pred CcCCcceeecCCeeECCEEECCCCEEEEeh-HhccCCchhcCCccccCcccccCCCC---CCCCCCCCCCCCCCCChHHH
Confidence 3222222222 11 1469999998544433 34458999999999999999997532 35689999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCCCC
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRPRN 204 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 204 (204)
|.+|++++++.++++|++++.++.. . ...++.|..++.+.+++|..|
T Consensus 406 A~~el~~~la~ll~~f~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~ 452 (452)
T PLN03141 406 ARLEASIFLHHLVTRFRWVAEEDTI--V--NFPTVRMKRKLPIWVTRIDDS 452 (452)
T ss_pred HHHHHHHHHHHHHhcCeeecCCCCe--e--ecccccCCCCceEEEEeCCCC
Confidence 9999999999999999999866532 2 235678888999999999754
No 22
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=8.7e-31 Score=210.38 Aligned_cols=192 Identities=24% Similarity=0.333 Sum_probs=141.2
Q ss_pred HHHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCCCC----CCCCCCCcccccccccccc--CCch-
Q 028744 8 TQAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLPPV----PEVPGRLPLIGNLLQLKEK--KPHM- 78 (204)
Q Consensus 8 ~~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~~~----~~~~~~~p~l~~~~~~~~~--~~~~- 78 (204)
+++...+..+++||.+|+ .++-|. ..|+.||++|+|+++|++.+.+.+ ..+..++||+.++++|.+| ++..
T Consensus 285 ~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl 364 (489)
T KOG0156|consen 285 DHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPL 364 (489)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccc
Confidence 445556666778888887 333344 449999999999999999987544 3467899999999996443 2211
Q ss_pred -hhHHHhhh-cCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCC-CCCCCcccccccCCccccCcchHHHH
Q 028744 79 -TFTRWAEM-YGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQ-NDPADLYKTMAFGAGKRVCAGSLQAS 155 (204)
Q Consensus 79 -~~~~~~~~-~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~-~~~~~~~~~~~fg~G~~~C~g~~~a~ 155 (204)
..+..... .-+||.||+|+.+++.+.+. ++||..|+||++|+||||++++ ... ....++|||.|.|.|+|..+|.
T Consensus 365 ~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai-~rDp~vw~dP~eF~PERFl~~~d~~~-~~~~~iPFG~GRR~CpG~~La~ 442 (489)
T KOG0156|consen 365 LLPRETTEDTKIGGYDIPKGTTVLVNLWAI-HRDPKVWEDPEEFKPERFLDSNDGKG-LDFKLIPFGSGRRICPGEGLAR 442 (489)
T ss_pred cccccccCCeeEcCEEcCCCCEEEEeehhh-hcCCccCCCccccChhhhcCCccccC-CceEecCCCCCcCCCCcHHHHH
Confidence 12222221 22469999999655555555 5999999999999999999974 333 6678999999999999999999
Q ss_pred HHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCC
Q 028744 156 LIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
+++.++++.++++|++.+.++..+.... +.....+.++.....+|.
T Consensus 443 ~~l~l~la~llq~F~w~~~~~~~d~~e~-~~~~~~~~pl~~~~~~r~ 488 (489)
T KOG0156|consen 443 AELFLFLANLLQRFDWKLPGGKVDMEEA-GLTLKKKKPLKAVPVPRL 488 (489)
T ss_pred HHHHHHHHHHHheeeeecCCCCCCCccc-ccceecCCcceeeeecCC
Confidence 9999999999999999998772121222 355555666777666663
No 23
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.97 E-value=1.4e-30 Score=213.38 Aligned_cols=195 Identities=22% Similarity=0.348 Sum_probs=141.0
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCch
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPHM 78 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~~ 78 (204)
.+++..++..+++||++|+ .++. .++.|+.||++|+++++|++.+... ...+..++||+.++++|.++ ++..
T Consensus 295 ~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~ 374 (517)
T PLN02687 295 DTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTP 374 (517)
T ss_pred HHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCcc
Confidence 4567777788889999888 4444 4444899999999999999986542 23345789999999996443 3332
Q ss_pred h-hHHHhhh-c-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCC-----CCCcccccccCCccccCcc
Q 028744 79 T-FTRWAEM-Y-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQND-----PADLYKTMAFGAGKRVCAG 150 (204)
Q Consensus 79 ~-~~~~~~~-~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~-----~~~~~~~~~fg~G~~~C~g 150 (204)
. ..+.+.. . -+++.||+|+.+.+..... |+|+.+|+||++|+|+||+++... ......++|||.|+|.|+|
T Consensus 375 ~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~-h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G 453 (517)
T PLN02687 375 LSLPRMAAEECEINGYHIPKGATLLVNVWAI-ARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAG 453 (517)
T ss_pred ccccccCCCCeeECCEEECCCCEEEEecHHh-cCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCC
Confidence 2 2222221 1 1469999998544444443 589999999999999999965321 1234579999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhceeeecCCCcc-cc---ceecceecccCCeEEEEeeCC
Q 028744 151 SLQASLIACTAIGRLVQEFKWNLREGEEE-SV---DTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 151 ~~~a~~~~~~~~~~l~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~r~ 202 (204)
+++|.+|+++++++++++|++++.++... .. ......+.+..++++++++|.
T Consensus 454 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 509 (517)
T PLN02687 454 LSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL 509 (517)
T ss_pred hHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCC
Confidence 99999999999999999999998765321 11 123445555667888888885
No 24
>PLN03018 homomethionine N-hydroxylase
Probab=99.97 E-value=2.5e-30 Score=211.90 Aligned_cols=194 Identities=15% Similarity=0.193 Sum_probs=139.0
Q ss_pred HHHHHHhcccccchhhhHH-HHHHH-HHHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCch
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSV-FFFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPHM 78 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~-~~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~~ 78 (204)
.+++...+..+++||.+++ .++.+ +++|+.||++|+++++|++.+.+. ..++..++||+.++++|.+| ++..
T Consensus 312 ~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~ 391 (534)
T PLN03018 312 PDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAH 391 (534)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCcc
Confidence 4567777778888998888 44444 445999999999999999887642 22234679999999996443 3322
Q ss_pred hh-HHHhhh--cCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCC------CCcccccccCCccccCc
Q 028744 79 TF-TRWAEM--YGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDP------ADLYKTMAFGAGKRVCA 149 (204)
Q Consensus 79 ~~-~~~~~~--~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~------~~~~~~~~fg~G~~~C~ 149 (204)
.. .+.+.. .-++|.||+|+.+.+... ..++||.+|+||++|+|+||++++... .....++|||.|+|.|+
T Consensus 392 ~~~~r~~~~d~~i~G~~IpkGt~V~~~~~-~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~ 470 (534)
T PLN03018 392 YVPPHVARQDTTLGGYFIPKGSHIHVCRP-GLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCV 470 (534)
T ss_pred ccCCcccCCCeeECCEEECCCCEEEEChH-HhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCc
Confidence 22 222221 114699999985444333 335899999999999999999643211 23467999999999999
Q ss_pred chHHHHHHHHHHHHHhhhhceeeecCCCcc-cc-ceecceecccCCeEEEEeeCC
Q 028744 150 GSLQASLIACTAIGRLVQEFKWNLREGEEE-SV-DTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 150 g~~~a~~~~~~~~~~l~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~r~ 202 (204)
|+++|.+|+++++++++++|++++.++..+ .. ...+ .+..+.++.+.+++|.
T Consensus 471 G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~p~~~~v~~~~R~ 524 (534)
T PLN03018 471 GVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDA-SLLMAKPLLLSVEPRL 524 (534)
T ss_pred cHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccc-ceecCCCeEEEEEecc
Confidence 999999999999999999999998765321 11 1223 3334568999999994
No 25
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.97 E-value=3.9e-30 Score=210.67 Aligned_cols=195 Identities=19% Similarity=0.236 Sum_probs=142.0
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC----CCCCCCCCcccccccccccc--CCch
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP----VPEVPGRLPLIGNLLQLKEK--KPHM 78 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~----~~~~~~~~p~l~~~~~~~~~--~~~~ 78 (204)
.+++.+.+..+++||++|+ .+++ .+++|+.||++|+++++|++..... ..++..++||+.++++|.++ ++..
T Consensus 294 ~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~ 373 (514)
T PLN03112 294 DVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGP 373 (514)
T ss_pred HHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcc
Confidence 4566777778888999888 3444 4455999999999999999986542 34456799999999996544 3322
Q ss_pred h-hHHHh-hhc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCC---C--CCCcccccccCCccccCcc
Q 028744 79 T-FTRWA-EMY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQN---D--PADLYKTMAFGAGKRVCAG 150 (204)
Q Consensus 79 ~-~~~~~-~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~---~--~~~~~~~~~fg~G~~~C~g 150 (204)
. ..+.+ +.. -+++.||+|+.+.+.. ...|+|+.+|+||++|+|+||..+.. . ......++|||.|+|.|+|
T Consensus 374 ~~~~R~~~~d~~i~g~~IPkGt~v~~~~-~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G 452 (514)
T PLN03112 374 FLIPHESLRATTINGYYIPAKTRVFINT-HGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPG 452 (514)
T ss_pred cccccccCCCeeEcCEEeCCCCEEEEeh-HHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCc
Confidence 1 22222 211 1469999998544433 34458999999999999999865321 1 1123579999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhceeeecCCCcc-cc---ceecceecccCCeEEEEeeCC
Q 028744 151 SLQASLIACTAIGRLVQEFKWNLREGEEE-SV---DTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 151 ~~~a~~~~~~~~~~l~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~r~ 202 (204)
+++|.+|++++++.++++|++++..+... .. ...++...+++++.++++||.
T Consensus 453 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 508 (514)
T PLN03112 453 APLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRL 508 (514)
T ss_pred HHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCC
Confidence 99999999999999999999998754321 11 123455556779999999996
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.97 E-value=3.9e-30 Score=209.33 Aligned_cols=194 Identities=22% Similarity=0.261 Sum_probs=142.7
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCCCC---CCCCCCcccccccccccc--CCchh
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPPVP---EVPGRLPLIGNLLQLKEK--KPHMT 79 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~~~---~~~~~~p~l~~~~~~~~~--~~~~~ 79 (204)
.+++.++++.+++||++|+ .++. ++++++.||++|+++++|++.++.... ....++||+.++++|.+| ++...
T Consensus 276 ~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~ 355 (489)
T PLN02936 276 SVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRPPTYEDIKELKYLTRCINESMRLYPHPPV 355 (489)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCccc
Confidence 4567777788888999888 4444 444588999999999999998654322 234689999999996444 33222
Q ss_pred -hHHHhh--hcCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCC---CCCcccccccCCccccCcchHH
Q 028744 80 -FTRWAE--MYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQND---PADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 80 -~~~~~~--~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~---~~~~~~~~~fg~G~~~C~g~~~ 153 (204)
..+... ...+++.||+|+.+++..... ++|+.+|+||++|+|+||+..... ......++|||.|+|.|+|+++
T Consensus 356 ~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~-~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~l 434 (489)
T PLN02936 356 LIRRAQVEDVLPGGYKVNAGQDIMISVYNI-HRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQF 434 (489)
T ss_pred ccceeccCccccCCeEECCCCEEEecHHhc-cCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHH
Confidence 222211 112469999998544444333 589999999999999999964321 1223579999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCC
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
|++|++++++.|+++|+++++++.+. ....++...|++++++++++|.
T Consensus 435 a~~~~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~R~ 482 (489)
T PLN02936 435 ALLEAIVALAVLLQRLDLELVPDQDI-VMTTGATIHTTNGLYMTVSRRR 482 (489)
T ss_pred HHHHHHHHHHHHHHhCeEEecCCCcc-ceecceEEeeCCCeEEEEEeee
Confidence 99999999999999999999865432 2223466678889999999985
No 27
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.97 E-value=3.3e-30 Score=210.05 Aligned_cols=191 Identities=14% Similarity=0.096 Sum_probs=141.2
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC--------CCCCCCCCcccccccccccc--
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP--------VPEVPGRLPLIGNLLQLKEK-- 74 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~--------~~~~~~~~p~l~~~~~~~~~-- 74 (204)
.+++...+..+++||++++ .++. .++.|+.||++|+++++|++.+... ......++||+.++++|.++
T Consensus 285 ~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~ 364 (490)
T PLN02302 285 DEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLI 364 (490)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhC
Confidence 4566777778889999888 3333 4445889999999999999876532 12234689999999986443
Q ss_pred CCchhhHHHhhh--cCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchH
Q 028744 75 KPHMTFTRWAEM--YGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSL 152 (204)
Q Consensus 75 ~~~~~~~~~~~~--~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~ 152 (204)
++.....+.+.+ .-+++.||+|+.+++ .....++|+.+|+||++|+|+||++.. .....++|||.|.|.|+|++
T Consensus 365 p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~-~~~~~~rd~~~~~dP~~F~PeR~~~~~---~~~~~~~pFG~G~r~C~G~~ 440 (490)
T PLN02302 365 NISLTVFREAKTDVEVNGYTIPKGWKVLA-WFRQVHMDPEVYPNPKEFDPSRWDNYT---PKAGTFLPFGLGSRLCPGND 440 (490)
T ss_pred CCcccchhcccCCEeECCEEECCCCEEEe-eHHHhcCCcccCCCccccChhhcCCCC---CCCCCccCCCCCCcCCCcHH
Confidence 333222222221 114699999985443 333445899999999999999998643 24468999999999999999
Q ss_pred HHHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCCC
Q 028744 153 QASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRPR 203 (204)
Q Consensus 153 ~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 203 (204)
+|.+|++++++.++++|++++.++..+ .. ......|.+++.+++++|..
T Consensus 441 lA~~e~~~~la~ll~~f~~~~~~~~~~-~~-~~~~~~p~~~~~~~~~~~~~ 489 (490)
T PLN02302 441 LAKLEISIFLHHFLLGYRLERLNPGCK-VM-YLPHPRPKDNCLARITKVAS 489 (490)
T ss_pred HHHHHHHHHHHHHHhcCeeEEcCCCCc-ce-eCCCCCCCCCceEEEEeccC
Confidence 999999999999999999999865332 12 23447788899999999975
No 28
>PLN02966 cytochrome P450 83A1
Probab=99.97 E-value=3.4e-30 Score=210.36 Aligned_cols=170 Identities=20% Similarity=0.336 Sum_probs=128.5
Q ss_pred HHHHHHhcccccchhhhHH-HHHH-HHHHHHHHHHHHHHHHhhhhcCCCC------CCCCCCCCcccccccccccc--CC
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLS-VFFFLFFIRGFISRQRMELAVNLPP------VPEVPGRLPLIGNLLQLKEK--KP 76 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~-~~~~l~~~~~~~~~l~~E~~~~~~~------~~~~~~~~p~l~~~~~~~~~--~~ 76 (204)
.+++...+..+++||++|+ .++. .++.|+.||++|+++++|++++... ...+..++||+.++++|.+| ++
T Consensus 287 ~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~ 366 (502)
T PLN02966 287 VDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPV 366 (502)
T ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCC
Confidence 4577777788889999888 4444 4444999999999999999886532 33456789999999996444 33
Q ss_pred chh-hHHHh-hhc-CCeEEEecCCeEEEEechHhhhhhhcc-CCCCCccccccccCCCC-CCCcccccccCCccccCcch
Q 028744 77 HMT-FTRWA-EMY-GPIYSIKTGASSMIVLNSADVAKEKQW-ENPEEWQPERFLDGQND-PADLYKTMAFGAGKRVCAGS 151 (204)
Q Consensus 77 ~~~-~~~~~-~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~-~~~~~F~P~R~~~~~~~-~~~~~~~~~fg~G~~~C~g~ 151 (204)
... +.+.+ +.. -+++.||+|+.+.+.+... ++||.+| +||++|+||||+++... ......++|||.|.|.|+|+
T Consensus 367 v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~-~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~ 445 (502)
T PLN02966 367 IPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAV-SRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGM 445 (502)
T ss_pred cccccCcccCCCeeEccEEECCCCEEEEecccc-cCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCH
Confidence 322 22222 211 1469999998555544444 5899999 99999999999865422 12346899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhceeeecCCC
Q 028744 152 LQASLIACTAIGRLVQEFKWNLREGE 177 (204)
Q Consensus 152 ~~a~~~~~~~~~~l~~~~~~~~~~~~ 177 (204)
++|.+|++++++.++++|++++.++.
T Consensus 446 ~~A~~el~~~la~ll~~f~i~~~~~~ 471 (502)
T PLN02966 446 RLGAAMLEVPYANLLLNFNFKLPNGM 471 (502)
T ss_pred HHHHHHHHHHHHHHHHhceeeCCCCC
Confidence 99999999999999999999987764
No 29
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.96 E-value=5.2e-30 Score=207.33 Aligned_cols=188 Identities=18% Similarity=0.182 Sum_probs=138.6
Q ss_pred HHHHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCCC-------CCCCCCCCcccccccccccc--C
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLPP-------VPEVPGRLPLIGNLLQLKEK--K 75 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~~-------~~~~~~~~p~l~~~~~~~~~--~ 75 (204)
.+++.+.++.+++||++++ .++.++ +.|+.||++|+++++|++..... ..+...++||+.++++|.+| +
T Consensus 262 ~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p 341 (463)
T PLN02196 262 DEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVAS 341 (463)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCC
Confidence 4567777888889999888 444444 44889999999999999875432 22334689999999996443 3
Q ss_pred CchhhHHHhhh-c-CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHH
Q 028744 76 PHMTFTRWAEM-Y-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 76 ~~~~~~~~~~~-~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~ 153 (204)
+.....+.+.+ . -++|.||+|+.++ +.....++|+.+|+||++|+||||+... ....++|||.|+|.|+|+++
T Consensus 342 ~~~~~~R~~~~d~~i~g~~IpkGt~v~-~~~~~~~rd~~~~~dP~~F~PeRfl~~~----~~~~~lpFG~G~r~C~G~~~ 416 (463)
T PLN02196 342 ILSFTFREAVEDVEYEGYLIPKGWKVL-PLFRNIHHSADIFSDPGKFDPSRFEVAP----KPNTFMPFGNGTHSCPGNEL 416 (463)
T ss_pred CccccceeeccccccCCEEeCCCCEEE-eeHHHhcCCchhcCCcCccChhhhcCCC----CCCcccCcCCCCCCCchHHH
Confidence 32222222221 1 1469999998543 3333445899999999999999998532 34689999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeC
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPR 201 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (204)
|+.|++++++.++++|++++.+++.. . ....+..|.++++++++..
T Consensus 417 A~~e~~~~la~ll~~f~~~~~~~~~~-~-~~~~~~~p~~~~~~~~~~~ 462 (463)
T PLN02196 417 AKLEISVLIHHLTTKYRWSIVGTSNG-I-QYGPFALPQNGLPIALSRK 462 (463)
T ss_pred HHHHHHHHHHHHHHhcEEEEcCCCCc-e-EEcccccCCCCceEEEecC
Confidence 99999999999999999998765432 2 2344566888999988753
No 30
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.96 E-value=7.9e-30 Score=206.34 Aligned_cols=192 Identities=16% Similarity=0.119 Sum_probs=140.6
Q ss_pred HHHHHHhcccccchhhhHH-HHHHHH-HHHHHHHHHHHHHHhhhhcCCCC-------CCCCCCCCcccccccccccc--C
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSVF-FFLFFIRGFISRQRMELAVNLPP-------VPEVPGRLPLIGNLLQLKEK--K 75 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~~-~~l~~~~~~~~~l~~E~~~~~~~-------~~~~~~~~p~l~~~~~~~~~--~ 75 (204)
.+++...+..+++||++++ .++.+. +.|+.||++++++++|++..... ..+...++||+.++++|.++ +
T Consensus 265 ~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p 344 (472)
T PLN02987 265 DEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVAN 344 (472)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccC
Confidence 3566777777888998887 334443 44889999999999999875421 11234689999999996444 3
Q ss_pred CchhhHHHhh-h-cCCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHH
Q 028744 76 PHMTFTRWAE-M-YGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQ 153 (204)
Q Consensus 76 ~~~~~~~~~~-~-~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~ 153 (204)
+.....+.+. . .-++|.||+|+.+++ .....++|+.+|+||++|+|+||+...........++|||.|.|.|+|+++
T Consensus 345 ~~~~~~R~~~~d~~~~G~~ip~Gt~v~~-~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~l 423 (472)
T PLN02987 345 IIGGIFRRAMTDIEVKGYTIPKGWKVFA-SFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYEL 423 (472)
T ss_pred CcCCccccCCCCeeECCEEECCCCEEEE-ehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHH
Confidence 3322222222 1 114699999985444 333445899999999999999998754322334679999999999999999
Q ss_pred HHHHHHHHHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeCC
Q 028744 154 ASLIACTAIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPRP 202 (204)
Q Consensus 154 a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 202 (204)
|..|++++++.++++|++++.++.. . ....++.|.+++++++++|.
T Consensus 424 A~~e~~~~la~ll~~f~~~~~~~~~--~-~~~~~~~p~~~~~~~~~~r~ 469 (472)
T PLN02987 424 ARVALSVFLHRLVTRFSWVPAEQDK--L-VFFPTTRTQKRYPINVKRRD 469 (472)
T ss_pred HHHHHHHHHHHHHhceEEEECCCCc--e-eecccccCCCCceEEEEecc
Confidence 9999999999999999999976543 2 12457788889999999984
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.92 E-value=1.5e-25 Score=178.48 Aligned_cols=171 Identities=20% Similarity=0.233 Sum_probs=127.6
Q ss_pred HHHHHHhcccccchhhhHH-HHHHHHHH-HHHHHHHHHHHHhhhhcCCCCCCCCCCCCccccccccccc--cCCchhhHH
Q 028744 7 VTQAFQEFQAVPFATSIAL-GTLSVFFF-LFFIRGFISRQRMELAVNLPPVPEVPGRLPLIGNLLQLKE--KKPHMTFTR 82 (204)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~~-~~~~~~~~-l~~~~~~~~~l~~E~~~~~~~~~~~~~~~p~l~~~~~~~~--~~~~~~~~~ 82 (204)
-+++.++++.+++||++|+ .++++.++ |+.||+.++++++|.+. |++.++++|.+ .+|.....+
T Consensus 234 d~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~------------~~~~~~v~E~LR~~ppv~~~~R 301 (411)
T COG2124 234 DDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR------------PLLEAVVEETLRLYPPVPLARR 301 (411)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch------------HHHHHHHHHHHHhCCchhccce
Confidence 4678888899999999998 44444444 99999999999986542 78888888543 344444444
Q ss_pred Hhhhc--CCeEEEecCCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCcccccccCCccccCcchHHHHHHHHH
Q 028744 83 WAEMY--GPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAFGAGKRVCAGSLQASLIACT 160 (204)
Q Consensus 83 ~~~~~--g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~fg~G~~~C~g~~~a~~~~~~ 160 (204)
.+++. -+++.||+|+.+.+.+... ++||.+|++|++|+|+||. ..+++||+|.|.|+|.+||.+|+++
T Consensus 302 ~~~~d~~igg~~Ip~G~~V~~~~~~a-nrDp~~f~~P~~F~p~R~~---------~~~l~FG~G~H~ClG~~lA~~E~~~ 371 (411)
T COG2124 302 VATEDVELGGYRIPAGTVVLLSIGAA-NRDPEVFPDPDEFDPERFN---------NAHLPFGGGPHRCLGAALARLELKV 371 (411)
T ss_pred eccCCEeeCCEEeCCCCEEEecHhhh-cCChhhCCChhhcCCCCCC---------CCCcCCCCCCccccCHHHHHHHHHH
Confidence 44322 1359999999544444444 5999999999999999996 5789999999999999999999999
Q ss_pred HHHHhhhhceeeecCCCccccceecceecccCCeEEEEeeC
Q 028744 161 AIGRLVQEFKWNLREGEEESVDTVGLTTHKLNPFHAIIRPR 201 (204)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 201 (204)
+++.++++|+.....+ . ..........+.....+.++.+
T Consensus 372 ~l~~ll~r~~~~~~~~-~-~~~~~~~~~~~~g~~~l~v~~~ 410 (411)
T COG2124 372 ALAELLRRFPLLLLAE-P-PPLVRRPTLVPRGGERLPVRRR 410 (411)
T ss_pred HHHHHHHhCchhhcCC-C-CCccccccccCCCcceeeeecC
Confidence 9999999998888776 2 2222334445555666666654
No 32
>PLN02648 allene oxide synthase
Probab=99.90 E-value=6.8e-24 Score=171.46 Aligned_cols=146 Identities=18% Similarity=0.305 Sum_probs=103.6
Q ss_pred HHHHHHHHHH-HHHHHHhhhhcCCCC-----CCCCCCCCcccccccccccc--CCchhh-HHHhh--hcC---CeEEEec
Q 028744 30 VFFFLFFIRG-FISRQRMELAVNLPP-----VPEVPGRLPLIGNLLQLKEK--KPHMTF-TRWAE--MYG---PIYSIKT 95 (204)
Q Consensus 30 ~~~~l~~~~~-~~~~l~~E~~~~~~~-----~~~~~~~~p~l~~~~~~~~~--~~~~~~-~~~~~--~~g---~~~~i~~ 95 (204)
++++|+.||+ +++++++|++..... ..+...++||+.++++|.++ ++.... ++..+ .++ ++|.||+
T Consensus 295 ~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~Ipk 374 (480)
T PLN02648 295 LLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKK 374 (480)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECC
Confidence 4455888985 999999999987642 11234679999999986443 333222 22111 122 3699999
Q ss_pred CCeEEEEechHhhhhhhccCCCCCccccccccCCCCCCCccccccc---------CCccccCcchHHHHHHHHHHHHHhh
Q 028744 96 GASSMIVLNSADVAKEKQWENPEEWQPERFLDGQNDPADLYKTMAF---------GAGKRVCAGSLQASLIACTAIGRLV 166 (204)
Q Consensus 96 g~~~~v~~~~~~~~~~~~~~~~~~F~P~R~~~~~~~~~~~~~~~~f---------g~G~~~C~g~~~a~~~~~~~~~~l~ 166 (204)
|+. +++.....|+|+.+|+||++|+|+||+++.... ...+++| |.|.|.|+|+++|..|++++++.++
T Consensus 375 G~~-V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~--~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll 451 (480)
T PLN02648 375 GEM-LFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK--LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELF 451 (480)
T ss_pred CCE-EEEChHHHhCCcccCCCcceeCCCCCCCCCccc--cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHH
Confidence 984 444444456899999999999999998643211 1233333 6778999999999999999999999
Q ss_pred hhce-eeecCCCc
Q 028744 167 QEFK-WNLREGEE 178 (204)
Q Consensus 167 ~~~~-~~~~~~~~ 178 (204)
++|+ +++.++..
T Consensus 452 ~~f~~~~l~~~~~ 464 (480)
T PLN02648 452 LRYDSFEIEVDTS 464 (480)
T ss_pred HHhCEEeecCCcc
Confidence 9998 98866644
No 33
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.77 E-value=2.5e-08 Score=81.19 Aligned_cols=68 Identities=38% Similarity=0.723 Sum_probs=61.2
Q ss_pred cCCCCCCCCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 50 VNLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 50 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
.++||||. .+|++||.+++....++..+.+++++||++++++.|..++|+++++...++.+..+..+|
T Consensus 25 ~~lPPGP~---~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~f 92 (489)
T KOG0156|consen 25 RNLPPGPP---PLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEF 92 (489)
T ss_pred CCCCcCCC---CCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccc
Confidence 45677766 999999999986556889999999999999999999999999999999999999988888
No 34
>PLN02196 abscisic acid 8'-hydroxylase
Probab=97.41 E-value=0.0004 Score=56.83 Aligned_cols=70 Identities=20% Similarity=0.405 Sum_probs=55.7
Q ss_pred CCCCCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCcccc
Q 028744 54 PVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQPE 123 (204)
Q Consensus 54 ~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P~ 123 (204)
++|+++..+|++|+.+++....++..+.++.++||+++.+..|+..+++++++.+.++.+..+.+.|+|.
T Consensus 35 ~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~ 104 (463)
T PLN02196 35 PLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPT 104 (463)
T ss_pred CCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccccc
Confidence 4566666899999987653346777788889999999999998889999999998888777666667653
No 35
>PLN02971 tryptophan N-hydroxylase
Probab=97.32 E-value=0.0012 Score=55.22 Aligned_cols=65 Identities=15% Similarity=0.327 Sum_probs=50.0
Q ss_pred CCCCCCCccccccccccccCC-chhhHHHhhhcC-CeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 56 PEVPGRLPLIGNLLQLKEKKP-HMTFTRWAEMYG-PIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~~~~~~-~~~~~~~~~~~g-~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
|+++..+|++|+..++....+ +..+.++.++|| +++.+..|..++|+++++...++.+..+...|
T Consensus 59 PPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f 125 (543)
T PLN02971 59 PPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALF 125 (543)
T ss_pred CcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhh
Confidence 334448999999877632222 455678889999 78999999889999999998888887776666
No 36
>PLN03234 cytochrome P450 83B1; Provisional
Probab=97.13 E-value=0.0035 Score=51.80 Aligned_cols=64 Identities=34% Similarity=0.617 Sum_probs=51.3
Q ss_pred CCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 57 EVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 57 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
+++..+|++|+++++....+...+.++.++||+++.++.|+..+++++++...++.+..+...|
T Consensus 31 Pgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f 94 (499)
T PLN03234 31 PGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNF 94 (499)
T ss_pred cCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccc
Confidence 3444899999998764334666778888999999999999889999999998888877666666
No 37
>PLN02655 ent-kaurene oxidase
Probab=97.09 E-value=0.001 Score=54.48 Aligned_cols=63 Identities=62% Similarity=0.966 Sum_probs=53.3
Q ss_pred CCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 58 VPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 58 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
++..+|++|+.+++....++..+.++.++||+++.+..|...+++++++...++.+.++...|
T Consensus 3 gp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f 65 (466)
T PLN02655 3 AVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSI 65 (466)
T ss_pred CCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchh
Confidence 344799999998875455778889999999999999999999999999998888887776666
No 38
>PLN03112 cytochrome P450 family protein; Provisional
Probab=96.98 E-value=0.0044 Score=51.42 Aligned_cols=66 Identities=27% Similarity=0.570 Sum_probs=52.5
Q ss_pred CCCCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCcc
Q 028744 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQ 121 (204)
Q Consensus 55 ~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~ 121 (204)
.++++..+|++|+..++. ..++..+.++.++||+++.+..|....+++++++..++.+..+.+.|.
T Consensus 33 ~ppgp~~~pl~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~ 98 (514)
T PLN03112 33 LPPGPPRWPIVGNLLQLG-PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFA 98 (514)
T ss_pred CccCCCCCCeeeeHHhcC-CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccc
Confidence 344455899999998764 346777788889999999999998789999999988888776666663
No 39
>PLN02290 cytokinin trans-hydroxylase
Probab=96.98 E-value=0.0037 Score=51.91 Aligned_cols=62 Identities=21% Similarity=0.374 Sum_probs=46.3
Q ss_pred CCCCCCCCccccccccccc------------------cCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCC
Q 028744 55 VPEVPGRLPLIGNLLQLKE------------------KKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWEN 116 (204)
Q Consensus 55 ~~~~~~~~p~l~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~ 116 (204)
++++|..+|++||..++.. ......+.++.++||+++.++.|...+++++++...++.+..+
T Consensus 43 ~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~ 122 (516)
T PLN02290 43 GVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTKY 122 (516)
T ss_pred CCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhcC
Confidence 4555568999999877531 0111235678889999999999998899999998877777655
No 40
>PLN02687 flavonoid 3'-monooxygenase
Probab=96.87 E-value=0.0037 Score=51.97 Aligned_cols=64 Identities=34% Similarity=0.594 Sum_probs=51.3
Q ss_pred CCCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 56 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
|+++..+|++|+..++. ..++..+.++.++||+++.+..|...+++++++...++.+.++...|
T Consensus 36 pPgp~~~P~iG~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f 99 (517)
T PLN02687 36 PPGPRGWPVLGNLPQLG-PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANF 99 (517)
T ss_pred CccCCCCCccccHHhcC-CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhh
Confidence 34445899999987764 34677788899999999999999989999999988777776666666
No 41
>PTZ00404 cytochrome P450; Provisional
Probab=96.85 E-value=0.0059 Score=50.25 Aligned_cols=64 Identities=28% Similarity=0.440 Sum_probs=49.6
Q ss_pred CCCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 56 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
++++..+|++|+...+.. .++..+.++.++||+++.+..|+..+++++++...++.+-.+...|
T Consensus 31 ~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~ 94 (482)
T PTZ00404 31 LKGPIPIPILGNLHQLGN-LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNF 94 (482)
T ss_pred CCCCCCCCeeccHhhhcc-cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhh
Confidence 334447999999877642 5677788889999999999999889999999987777765554444
No 42
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=96.84 E-value=0.0063 Score=50.47 Aligned_cols=67 Identities=31% Similarity=0.566 Sum_probs=51.6
Q ss_pred cCCCCCCCCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 50 VNLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 50 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
..++|++. .+|++|+...+. ..++..+.++.++||+++.+..|...+++++++...++.+..+...|
T Consensus 30 ~~~pPgp~---~~Pl~G~l~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f 96 (504)
T PLN00110 30 RKLPPGPR---GWPLLGALPLLG-NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINF 96 (504)
T ss_pred CCCcccCC---CCCeeechhhcC-CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhh
Confidence 34555554 899999986654 34667788889999999999999878999999988777766555555
No 43
>PLN02183 ferulate 5-hydroxylase
Probab=96.66 E-value=0.0062 Score=50.65 Aligned_cols=64 Identities=27% Similarity=0.529 Sum_probs=49.1
Q ss_pred CCCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 56 PEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
++++..+|++|+.+.+. ..++..+.++.++||+++.+..|..++++++++...++.+-.+...|
T Consensus 38 ppgp~~~Pl~G~l~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f 101 (516)
T PLN02183 38 PPGPKGLPIIGNMLMMD-QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVF 101 (516)
T ss_pred CcCCCCCCeeccHHhcC-CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhh
Confidence 33444899999987653 23455677888999999999999989999999988777776555545
No 44
>PLN02500 cytochrome P450 90B1
Probab=96.55 E-value=0.0054 Score=50.64 Aligned_cols=65 Identities=17% Similarity=0.178 Sum_probs=48.7
Q ss_pred CCCCCCCccccccccc-cc---cCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 56 PEVPGRLPLIGNLLQL-KE---KKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~-~~---~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
|+++..+|++|+.+.+ .. ..++..+.++.++||+++.+..|...+|+++++...++.+..+...|
T Consensus 40 PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f 108 (490)
T PLN02500 40 PPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLF 108 (490)
T ss_pred CCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeE
Confidence 3344489999997643 11 23445567778899999999999889999999998888877666656
No 45
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=96.53 E-value=0.014 Score=48.35 Aligned_cols=64 Identities=27% Similarity=0.539 Sum_probs=50.0
Q ss_pred CCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 57 EVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 57 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
+++...|++|+..++.....+..+.++.++||+++.++.|...+|++++++..++.+.++.+.|
T Consensus 33 Pgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~ 96 (503)
T PLN02394 33 PGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEF 96 (503)
T ss_pred cCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccc
Confidence 3444899999987664333456778899999999999999888999999987877776666556
No 46
>PLN02774 brassinosteroid-6-oxidase
Probab=96.50 E-value=0.0044 Score=50.78 Aligned_cols=64 Identities=14% Similarity=0.139 Sum_probs=50.5
Q ss_pred CCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCccc
Q 028744 58 VPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQP 122 (204)
Q Consensus 58 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P 122 (204)
++..+|++|+.+.+. +.+...+.++.++||+++.++.|...+++++++...++.+.++++.|.+
T Consensus 35 gp~~~P~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~ 98 (463)
T PLN02774 35 GTMGWPLFGETTEFL-KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVP 98 (463)
T ss_pred CCCCCCchhhHHHHH-HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEe
Confidence 334789999987653 2345567788889999999999888999999999888888777776643
No 47
>PLN02966 cytochrome P450 83A1
Probab=96.50 E-value=0.008 Score=49.81 Aligned_cols=64 Identities=42% Similarity=0.739 Sum_probs=50.9
Q ss_pred CCCCCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 57 EVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 57 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
+++..+|++|++..+....+...+.++.++||+++.++.|...+++++++...++.+-.+...|
T Consensus 32 pgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~ 95 (502)
T PLN02966 32 PGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNF 95 (502)
T ss_pred cCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccc
Confidence 3344899999998764345677888899999999999999888999999988777776655555
No 48
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=96.43 E-value=0.0085 Score=49.28 Aligned_cols=65 Identities=17% Similarity=0.257 Sum_probs=51.3
Q ss_pred CCCCCCCcccccccccc----ccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 56 PEVPGRLPLIGNLLQLK----EKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~~----~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
|+++..+|++|+.+++. ...+...+.++.++||+++.+..|+..+++++++...++.+.++.+.|
T Consensus 32 ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f 100 (472)
T PLN02987 32 PPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLF 100 (472)
T ss_pred cCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceE
Confidence 44555899999998752 134566677888999999999998888999999988888887777767
No 49
>PLN00168 Cytochrome P450; Provisional
Probab=96.27 E-value=0.024 Score=47.22 Aligned_cols=63 Identities=22% Similarity=0.389 Sum_probs=50.0
Q ss_pred CCCCCcccccccccc--ccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 58 VPGRLPLIGNLLQLK--EKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 58 ~~~~~p~l~~~~~~~--~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
++..+|++|+...+. ...++..+.++.++||+++.+..|..++++++++...++.+..+...|
T Consensus 39 gp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f 103 (519)
T PLN00168 39 GPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAAL 103 (519)
T ss_pred CCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCcc
Confidence 344799999987542 123556678889999999999999889999999998888887776666
No 50
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=96.25 E-value=0.006 Score=49.10 Aligned_cols=64 Identities=31% Similarity=0.621 Sum_probs=52.3
Q ss_pred CCCCCCccccccccccc-cCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 57 EVPGRLPLIGNLLQLKE-KKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 57 ~~~~~~p~l~~~~~~~~-~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
+++..+|++|+.+.+.. ..++..+.++.++||+++.+..|...+++++++...++.+-.+...|
T Consensus 2 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~ 66 (463)
T PF00067_consen 2 PGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYF 66 (463)
T ss_dssp SCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTE
T ss_pred cCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccc
Confidence 34459999999998752 45677788899999999999999999999999998888776665555
No 51
>PLN02302 ent-kaurenoic acid oxidase
Probab=96.14 E-value=0.057 Score=44.50 Aligned_cols=65 Identities=17% Similarity=0.339 Sum_probs=46.9
Q ss_pred CCCCCCCCcccccccccc----ccCCchhhHHHhhhcCC--eEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 55 VPEVPGRLPLIGNLLQLK----EKKPHMTFTRWAEMYGP--IYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 55 ~~~~~~~~p~l~~~~~~~----~~~~~~~~~~~~~~~g~--~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
.|+++..+|++|+.+++. ...++..+.++.++||+ ++.++.|...++++++++...+.+- +.+.|
T Consensus 43 lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~-~~~~f 113 (490)
T PLN02302 43 LPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLT-DDDAF 113 (490)
T ss_pred CcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHc-CCCcc
Confidence 344445899999987642 22466677888899996 5788888888999999987766554 43555
No 52
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=96.11 E-value=0.0073 Score=49.31 Aligned_cols=65 Identities=18% Similarity=0.307 Sum_probs=51.2
Q ss_pred CCCCCCcccccccccc----ccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCcc
Q 028744 57 EVPGRLPLIGNLLQLK----EKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEWQ 121 (204)
Q Consensus 57 ~~~~~~p~l~~~~~~~----~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~ 121 (204)
+++..+|++|+.+.+. ...++..+.++.++||+++.++.|...+++++++...++.+-++...|.
T Consensus 10 pg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~ 78 (452)
T PLN03141 10 KGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFV 78 (452)
T ss_pred CCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeee
Confidence 3444899999998763 1346667778889999999999999999999999888877766666664
No 53
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.40 E-value=0.082 Score=43.64 Aligned_cols=66 Identities=20% Similarity=0.357 Sum_probs=49.2
Q ss_pred CCCCCCCCccccccccccc-cCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 55 VPEVPGRLPLIGNLLQLKE-KKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 55 ~~~~~~~~p~l~~~~~~~~-~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
|.+++...|++|++..+.. ..+.....+.-..+|+++++..|.++.+++.++.+.++.+.+|.+.|
T Consensus 32 Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F 98 (499)
T KOG0158|consen 32 GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNF 98 (499)
T ss_pred CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccC
Confidence 5555557899999977432 22333333322333899999999999999999999999999999999
No 54
>PLN03018 homomethionine N-hydroxylase
Probab=94.58 E-value=0.29 Score=41.11 Aligned_cols=65 Identities=25% Similarity=0.366 Sum_probs=45.9
Q ss_pred CCCCCCCccccccccccccCCc-hhhHHHhhhc-CCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 56 PEVPGRLPLIGNLLQLKEKKPH-MTFTRWAEMY-GPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~~~~~~~-~~~~~~~~~~-g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
|+++..+|++|+.+++....+. ....+..+.| |+++.+..|+.++|+++++...++.+.++...|
T Consensus 42 PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f 108 (534)
T PLN03018 42 PPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADL 108 (534)
T ss_pred CcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhh
Confidence 3344589999999875322232 1233334444 689999999989999999998888887666667
No 55
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.61 E-value=0.31 Score=39.47 Aligned_cols=54 Identities=19% Similarity=0.273 Sum_probs=43.4
Q ss_pred CCCccccccccccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhcc
Q 028744 60 GRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQW 114 (204)
Q Consensus 60 ~~~p~l~~~~~~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~ 114 (204)
...|++|+.+.++ ..|...+++..++||+++++..++..+-++.++.-.+..++
T Consensus 38 gwiP~lG~a~~fg-k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~ 91 (486)
T KOG0684|consen 38 GWIPWLGSALAFG-KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFK 91 (486)
T ss_pred cCcchhhHHHHhc-cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHc
Confidence 4789999999986 46778888888999999999998888877777764444443
No 56
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=93.39 E-value=0.38 Score=40.08 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=43.4
Q ss_pred CCCCCccccccccccccCCchhhHHHhhhc---CCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 58 VPGRLPLIGNLLQLKEKKPHMTFTRWAEMY---GPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 58 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~---g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
++..+|++|+.+.+. . .+..+.++.+.| |+++.+..|...+++++++...++.+..+...|
T Consensus 34 gp~~~p~~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~ 97 (516)
T PLN03195 34 GPKSWPIIGAALEQL-K-NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANY 97 (516)
T ss_pred CCCCCCeecchHHHH-h-ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCcccc
Confidence 344799999986542 1 234455666666 678999999889999999987777765554445
No 57
>PLN02936 epsilon-ring hydroxylase
Probab=90.86 E-value=0.39 Score=39.79 Aligned_cols=61 Identities=20% Similarity=0.500 Sum_probs=47.5
Q ss_pred CCCcccccccc----ccccCCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 60 GRLPLIGNLLQ----LKEKKPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 60 ~~~p~l~~~~~----~~~~~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
..+|++|+.++ +....++..+.+++++||+++.+..|...++++++++..++.+-.+...|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f 82 (489)
T PLN02936 18 SGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKY 82 (489)
T ss_pred CCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccc
Confidence 47899999876 33445677888999999999999999888999999887776664444445
No 58
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=88.96 E-value=2.4 Score=35.31 Aligned_cols=64 Identities=9% Similarity=0.106 Sum_probs=41.0
Q ss_pred CCCCCCCCccccccccccccCCchhhHHHhh----hcCCeE---EEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 55 VPEVPGRLPLIGNLLQLKEKKPHMTFTRWAE----MYGPIY---SIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 55 ~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~----~~g~~~---~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
+.+++..+|++|++..+... ... +.++.. .++..+ .+..|..++++++++...++.+-.+...|
T Consensus 32 ~~p~p~~~pl~G~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~ 102 (500)
T PLN02169 32 GQPILKNWPFLGMLPGMLHQ-IPR-IYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNY 102 (500)
T ss_pred CCCCCCCCCcccchHHHHHc-cCc-HHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccC
Confidence 33444589999998765322 222 333333 355433 35668779999999998888887666655
No 59
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=86.81 E-value=3.1 Score=34.70 Aligned_cols=58 Identities=29% Similarity=0.458 Sum_probs=42.1
Q ss_pred CCCCCCCcccccccccccc--CCchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhc
Q 028744 56 PEVPGRLPLIGNLLQLKEK--KPHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQ 113 (204)
Q Consensus 56 ~~~~~~~p~l~~~~~~~~~--~~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~ 113 (204)
++++..+|++|+++.+... .......+...+||+.+....|+.++++++++......+
T Consensus 37 ~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il 96 (497)
T KOG0157|consen 37 PPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEIL 96 (497)
T ss_pred CCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHH
Confidence 3344489999999875321 233344566778888889999988999999998776655
No 60
>PLN02738 carotene beta-ring hydroxylase
Probab=79.99 E-value=2.5 Score=36.43 Aligned_cols=45 Identities=18% Similarity=0.386 Sum_probs=36.2
Q ss_pred CchhhHHHhhhcCCeEEEecCCeEEEEechHhhhhhhccCCCCCc
Q 028744 76 PHMTFTRWAEMYGPIYSIKTGASSMIVLNSADVAKEKQWENPEEW 120 (204)
Q Consensus 76 ~~~~~~~~~~~~g~~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F 120 (204)
....+.+++++||+++.|..|...+++++++...++.+-.+...|
T Consensus 153 ~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f 197 (633)
T PLN02738 153 FFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAY 197 (633)
T ss_pred HHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccC
Confidence 456678888999999999988877899999988877776555555
No 61
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=63.02 E-value=8.6 Score=32.07 Aligned_cols=58 Identities=28% Similarity=0.443 Sum_probs=41.2
Q ss_pred CCCCCcccccccc---ccccCCchhhHHHhhhcCCeEEEe-cCCeEEEEechHhhhhhhccCC
Q 028744 58 VPGRLPLIGNLLQ---LKEKKPHMTFTRWAEMYGPIYSIK-TGASSMIVLNSADVAKEKQWEN 116 (204)
Q Consensus 58 ~~~~~p~l~~~~~---~~~~~~~~~~~~~~~~~g~~~~i~-~g~~~~v~~~~~~~~~~~~~~~ 116 (204)
+++.+|+++.... ......+.......++||+++..+ .|+...|.+.++... +.++.+
T Consensus 54 ~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~-E~v~r~ 115 (519)
T KOG0159|consen 54 GPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDV-EKVFRN 115 (519)
T ss_pred CCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHH-HHHHhc
Confidence 3457888888763 333345666677788999999999 888888888888643 555533
No 62
>PLN02648 allene oxide synthase
Probab=60.82 E-value=10 Score=31.61 Aligned_cols=55 Identities=15% Similarity=0.176 Sum_probs=37.1
Q ss_pred CCCCCCCCccccccccc----cccCCchhhHHHhhhcCC-eEEEecCCeEE-------EEechHhhh
Q 028744 55 VPEVPGRLPLIGNLLQL----KEKKPHMTFTRWAEMYGP-IYSIKTGASSM-------IVLNSADVA 109 (204)
Q Consensus 55 ~~~~~~~~p~l~~~~~~----~~~~~~~~~~~~~~~~g~-~~~i~~g~~~~-------v~~~~~~~~ 109 (204)
.|++...+|++|+.+++ ....+...+.+..++||+ ++.+..++.++ |++.+....
T Consensus 18 ~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~ 84 (480)
T PLN02648 18 EIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSF 84 (480)
T ss_pred CCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCce
Confidence 35556689999999753 122344556666779998 99888865344 777777643
No 63
>KOG3262 consensus H/ACA small nucleolar RNP component GAR1 [Translation, ribosomal structure and biogenesis]
Probab=56.41 E-value=21 Score=25.43 Aligned_cols=63 Identities=24% Similarity=0.516 Sum_probs=37.3
Q ss_pred CCccccccccccccCCchhhHHHhhhcCC----eEEEecCCeEEEEechHhhhhhhccCCCCCccc-cccccCC
Q 028744 61 RLPLIGNLLQLKEKKPHMTFTRWAEMYGP----IYSIKTGASSMIVLNSADVAKEKQWENPEEWQP-ERFLDGQ 129 (204)
Q Consensus 61 ~~p~l~~~~~~~~~~~~~~~~~~~~~~g~----~~~i~~g~~~~v~~~~~~~~~~~~~~~~~~F~P-~R~~~~~ 129 (204)
++||..+=+.+.. ..++-++-..+++ .++|..... |..++.. -.+++|-+|+++-| +|||+..
T Consensus 75 kIPyfNAPIylen---k~qIGKVDEIfG~i~d~~fsIK~~dg--v~assfk-~g~k~fi~p~KllPl~RFLP~p 142 (215)
T KOG3262|consen 75 KIPYFNAPIYLEN---KEQIGKVDEIFGPINDVHFSIKPSDG--VQASSFK-PGDKLFIDPDKLLPLDRFLPQP 142 (215)
T ss_pred cCCCCCCceeecc---hhhhcchhhhcccccccEEEEecCCC--ceeeccc-CCCeEEecccccCcHhhcCCCC
Confidence 6777777655421 1222233334442 257777653 3344443 45788899999988 7999754
No 64
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=54.68 E-value=5.1 Score=22.78 Aligned_cols=9 Identities=44% Similarity=0.892 Sum_probs=7.0
Q ss_pred cccccccCC
Q 028744 121 QPERFLDGQ 129 (204)
Q Consensus 121 ~P~R~~~~~ 129 (204)
||||||.-.
T Consensus 44 DPERWLP~~ 52 (59)
T PF08492_consen 44 DPERWLPKR 52 (59)
T ss_pred CccccCchh
Confidence 799999643
No 65
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=39.61 E-value=27 Score=23.63 Aligned_cols=24 Identities=17% Similarity=0.223 Sum_probs=16.9
Q ss_pred cccCcchHHHHHHHHHHHHHhhhh
Q 028744 145 KRVCAGSLQASLIACTAIGRLVQE 168 (204)
Q Consensus 145 ~~~C~g~~~a~~~~~~~~~~l~~~ 168 (204)
.-.|.|+.||..++-.++..++..
T Consensus 17 qyN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 17 QYNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EEETTS----HHHHHHHHHHHHHS
T ss_pred EecccchHHHHHHHHHHHHHHhcC
Confidence 357999999999999999988863
No 66
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=32.84 E-value=16 Score=26.24 Aligned_cols=40 Identities=25% Similarity=0.428 Sum_probs=25.7
Q ss_pred hccCCCCCccccccccCCCCCCCc-ccccccCCccccCcch
Q 028744 112 KQWENPEEWQPERFLDGQNDPADL-YKTMAFGAGKRVCAGS 151 (204)
Q Consensus 112 ~~~~~~~~F~P~R~~~~~~~~~~~-~~~~~fg~G~~~C~g~ 151 (204)
..-..-.+|+|.||..--....++ .+-.-|.+|.-.|-|.
T Consensus 44 al~~~N~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctgA 84 (200)
T KOG3302|consen 44 ALHARNAEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTGA 84 (200)
T ss_pred hhhccccccCcccccEEEEEEcCCceEEEEecCCcEEEecc
Confidence 333445678999985432222222 4567899999999974
No 67
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=24.10 E-value=35 Score=18.96 Aligned_cols=10 Identities=50% Similarity=1.142 Sum_probs=8.9
Q ss_pred ccCCccccCc
Q 028744 140 AFGAGKRVCA 149 (204)
Q Consensus 140 ~fg~G~~~C~ 149 (204)
+||.|.|.|.
T Consensus 13 kfg~GsrsC~ 22 (56)
T KOG3506|consen 13 KFGQGSRSCR 22 (56)
T ss_pred ccCCCCccee
Confidence 7899999987
No 68
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=22.73 E-value=39 Score=24.78 Aligned_cols=16 Identities=13% Similarity=0.491 Sum_probs=14.1
Q ss_pred hhhhccCCCCCccccc
Q 028744 109 AKEKQWENPEEWQPER 124 (204)
Q Consensus 109 ~~~~~~~~~~~F~P~R 124 (204)
.|+.+|.|.+.|+|.|
T Consensus 196 ~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 196 EDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCcccccCccccCCCC
Confidence 5789999999999987
No 69
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=21.58 E-value=33 Score=24.29 Aligned_cols=34 Identities=26% Similarity=0.510 Sum_probs=23.3
Q ss_pred CCccccccccCCCCC-CCcccccccCCccccCcch
Q 028744 118 EEWQPERFLDGQNDP-ADLYKTMAFGAGKRVCAGS 151 (204)
Q Consensus 118 ~~F~P~R~~~~~~~~-~~~~~~~~fg~G~~~C~g~ 151 (204)
.+|+|+||-.--... ....+.+-|+.|.=.|.|.
T Consensus 29 ~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~tGa 63 (174)
T cd04518 29 AEYNPDQFPGLVYRLEDPKIAALIFRSGKMVCTGA 63 (174)
T ss_pred cEECCCcCcEEEEEccCCcEEEEEECCCeEEEEcc
Confidence 578888874322111 2336788999999999985
Done!