Query 028745
Match_columns 204
No_of_seqs 109 out of 1030
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 16:19:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028745.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028745hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02885 nicotinate phosphorib 100.0 2.9E-50 6.3E-55 377.5 21.2 177 19-195 4-180 (545)
2 PRK12484 nicotinate phosphorib 100.0 6E-47 1.3E-51 348.9 21.3 172 26-202 4-177 (443)
3 TIGR01513 NAPRTase_put putativ 100.0 2.9E-46 6.2E-51 344.3 20.4 165 27-195 1-165 (443)
4 KOG2511 Nicotinic acid phospho 100.0 3.6E-47 7.8E-52 334.3 10.3 175 19-195 1-175 (420)
5 PRK09243 nicotinate phosphorib 100.0 2E-45 4.3E-50 340.7 21.5 177 22-202 5-183 (464)
6 cd01570 NAPRTase_A Nicotinate 100.0 3.7E-45 8E-50 326.2 20.7 165 27-195 1-165 (327)
7 cd01401 PncB_like Nicotinate p 100.0 8.5E-45 1.8E-49 328.3 19.3 159 26-195 2-187 (377)
8 PRK05321 nicotinate phosphorib 100.0 7.5E-45 1.6E-49 330.8 19.0 167 21-198 5-193 (400)
9 TIGR01514 NAPRTase nicotinate 100.0 3.3E-44 7.1E-49 325.7 19.9 159 24-192 2-185 (394)
10 COG1488 PncB Nicotinic acid ph 100.0 5.4E-43 1.2E-47 319.6 19.4 175 23-202 10-186 (405)
11 PHA02594 nadV nicotinamide pho 100.0 1.3E-40 2.9E-45 307.1 17.1 177 22-203 6-206 (470)
12 PRK09198 putative nicotinate p 100.0 1.5E-39 3.2E-44 300.2 17.5 174 24-203 5-202 (463)
13 cd01567 NAPRTase_PncB Nicotina 100.0 3.9E-38 8.4E-43 282.1 19.9 173 27-203 1-185 (343)
14 cd01569 PBEF_like pre-B-cell c 100.0 1.3E-37 2.9E-42 282.7 16.7 171 28-203 2-200 (407)
15 PRK07188 nicotinate phosphorib 99.9 2.3E-21 5E-26 174.6 14.0 131 23-187 12-142 (352)
16 PRK08662 nicotinate phosphorib 99.9 2.4E-21 5.2E-26 174.1 13.5 138 16-188 4-141 (343)
17 cd00516 PRTase_typeII Phosphor 99.9 6.1E-21 1.3E-25 166.1 14.2 136 31-201 1-137 (281)
18 cd01571 NAPRTase_B Nicotinate 99.7 7.7E-17 1.7E-21 142.8 16.8 124 28-189 2-125 (302)
19 cd01568 QPRTase_NadC Quinolina 99.1 3.8E-10 8.2E-15 98.6 11.2 105 46-188 24-129 (269)
20 cd01573 modD_like ModD; Quinol 98.9 6.2E-09 1.3E-13 91.2 10.4 105 46-188 24-130 (272)
21 cd01572 QPRTase Quinolinate ph 98.9 2.5E-08 5.4E-13 87.2 11.4 106 46-188 24-130 (268)
22 TIGR00078 nadC nicotinate-nucl 98.8 2.9E-08 6.2E-13 86.7 11.2 104 46-188 22-126 (265)
23 PRK08385 nicotinate-nucleotide 98.5 1.3E-06 2.9E-11 76.9 10.9 104 48-188 28-132 (278)
24 PRK05848 nicotinate-nucleotide 98.5 1.4E-06 3E-11 76.6 10.6 103 48-188 28-130 (273)
25 PRK07896 nicotinate-nucleotide 98.4 3.5E-06 7.5E-11 74.6 11.4 106 48-188 42-148 (289)
26 PRK05742 nicotinate-nucleotide 98.3 5.1E-06 1.1E-10 73.2 10.7 104 48-188 34-138 (277)
27 PRK09016 quinolinate phosphori 98.0 7.3E-05 1.6E-09 66.4 11.0 104 48-188 53-157 (296)
28 PRK07428 nicotinate-nucleotide 97.9 7.8E-05 1.7E-09 66.0 10.3 103 49-188 41-144 (288)
29 PRK08072 nicotinate-nucleotide 97.9 0.00019 4.2E-09 63.2 11.4 104 48-188 32-136 (277)
30 PLN02716 nicotinate-nucleotide 97.8 0.0002 4.3E-09 64.0 10.9 103 46-187 44-147 (308)
31 PRK06106 nicotinate-nucleotide 97.8 0.00029 6.3E-09 62.2 10.7 105 46-187 36-141 (281)
32 PRK06559 nicotinate-nucleotide 97.6 0.00045 9.8E-09 61.3 10.2 105 46-187 37-144 (290)
33 PF02749 QRPTase_N: Quinolinat 97.5 0.00054 1.2E-08 50.1 7.6 75 46-158 13-88 (88)
34 TIGR01334 modD putative molybd 97.5 0.0012 2.6E-08 58.3 10.6 102 46-186 28-132 (277)
35 PRK06096 molybdenum transport 97.3 0.0026 5.6E-08 56.4 10.7 89 46-171 29-117 (284)
36 PRK06543 nicotinate-nucleotide 97.3 0.0032 6.9E-08 55.7 10.8 92 46-173 31-123 (281)
37 PRK06978 nicotinate-nucleotide 97.1 0.0056 1.2E-07 54.5 10.2 89 48-172 50-139 (294)
38 COG0157 NadC Nicotinate-nucleo 96.5 0.023 5E-07 50.2 9.5 92 45-172 29-121 (280)
39 KOG3008 Quinolinate phosphorib 89.5 0.84 1.8E-05 39.6 5.4 54 119-172 75-128 (300)
40 KOG1159 NADP-dependent flavopr 69.4 20 0.00043 34.5 7.3 63 106-185 405-471 (574)
41 PF06888 Put_Phosphatase: Puta 40.0 63 0.0014 27.8 5.0 57 64-124 40-98 (234)
42 PF14568 SUKH_6: SMI1-KNR4 cel 38.7 23 0.0005 25.7 1.9 28 86-113 1-28 (120)
43 PF14567 SUKH_5: SMI1-KNR4 cel 38.0 24 0.00052 27.9 2.0 28 84-111 22-49 (132)
44 smart00860 SMI1_KNR4 SMI1 / KN 33.1 54 0.0012 22.8 3.1 30 84-113 2-31 (129)
45 TIGR01544 HAD-SF-IE haloacid d 32.5 90 0.0019 27.6 4.9 88 9-109 40-134 (277)
46 PF09346 SMI1_KNR4: SMI1 / KNR 28.7 45 0.00097 24.0 2.1 27 84-110 2-28 (130)
47 PHA00650 hypothetical protein 27.6 82 0.0018 22.0 3.0 60 85-154 8-68 (82)
48 PF08225 Antimicrobial19: Pseu 25.9 78 0.0017 17.3 2.1 14 68-81 8-21 (23)
49 PF13533 Biotin_lipoyl_2: Biot 24.2 1E+02 0.0022 19.6 2.9 23 120-142 17-39 (50)
50 PF03927 NapD: NapD protein; 23.5 1.5E+02 0.0033 20.9 4.0 24 113-142 27-51 (79)
51 KOG0030 Myosin essential light 20.4 54 0.0012 26.5 1.1 56 34-93 71-130 (152)
No 1
>PLN02885 nicotinate phosphoribosyltransferase
Probab=100.00 E-value=2.9e-50 Score=377.47 Aligned_cols=177 Identities=76% Similarity=1.268 Sum_probs=168.2
Q ss_pred CCCCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCC
Q 028745 19 GPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPG 98 (204)
Q Consensus 19 ~~~~~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~ 98 (204)
.|+++++.+|+||+||+||+|+||++++++.+++|+||+|+.|++++|+|++||+++|++|++++||+|||+||++.++-
T Consensus 4 ~~~~~~i~~LlTDlYklTM~~ay~~~~~~~~~avf~~f~R~~p~~~~~~v~aGL~~~l~~L~~l~Ft~edi~yL~~~~~~ 83 (545)
T PLN02885 4 RPTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLFFRKNPFGGEYTVFAGLEECLRFIANFKFTDDDIDFLRSVMPS 83 (545)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEecCCCCCCcccHHHHHHHHHHHHhhCCCCHHHHHHHHhhccc
Confidence 37888999999999999999999999998889999999999999999999999999999999999999999999988632
Q ss_pred CCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee
Q 028745 99 SCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLL 178 (204)
Q Consensus 99 ~~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~ 178 (204)
+|+++|++||++|++++|+|+|+|||++|||+||+|+|+|||+++++|||+||+|||+++++||++++++.+++++++++
T Consensus 84 ~f~~~Fl~yL~~~~~~~V~I~A~~EG~lvf~~eP~i~IeGp~~~~~LlEt~LL~iI~~~s~iAT~aar~~~aa~~~~~v~ 163 (545)
T PLN02885 84 GCEDAFFDYLRGLDCSDVEVYAIPEGSVVFPRVPLMRIEGPLAVVQLLETTFLTLVNYASLVATNAARHRLVAGKSKVLL 163 (545)
T ss_pred cCCHHHHHHHHhCCCCCceEEecCCCcEecCCCceEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999997568899
Q ss_pred eccCCCCCChhhHHHhh
Q 028745 179 EFGLRRAQVAHIIFNLL 195 (204)
Q Consensus 179 eFG~RR~~g~~a~~~~~ 195 (204)
|||+||+||+|||++++
T Consensus 164 eFG~RRaqg~d~~~~~~ 180 (545)
T PLN02885 164 EFGLRRAQGPDGGISAS 180 (545)
T ss_pred ECCCccCcCccHHHHHH
Confidence 99999999999988665
No 2
>PRK12484 nicotinate phosphoribosyltransferase; Provisional
Probab=100.00 E-value=6e-47 Score=348.91 Aligned_cols=172 Identities=35% Similarity=0.602 Sum_probs=161.4
Q ss_pred chhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHH
Q 028745 26 TPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFF 105 (204)
Q Consensus 26 ~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~ 105 (204)
.+|+||+||+||+|+||+++|+ .+|+|+||+|+.|+.++|+|++||+++|++|++++||+||++||++. + +|+++|+
T Consensus 4 ~~l~TD~Y~ltM~~~~~~~~~~-~~~~fe~~~R~~p~~~~~~v~aGl~~~l~~L~~~~ft~eei~yl~~~-~-~f~~~f~ 80 (443)
T PRK12484 4 LALLTDLYEVTMANAYLREGMS-APATFSLFYRKLPDGRGFLIAAGLADVVEFLEAFRFDEQDLRYLRGL-N-QFSEEFL 80 (443)
T ss_pred cchHHHHHHHHHHHHHHHhCCC-CeEEEEEEECCCCCCCceehHHHHHHHHHHHhcCCCCHHHHHHHHHc-C-CCCHHHH
Confidence 5689999999999999999995 57999999999998899999999999999999999999999999987 3 7999999
Q ss_pred HHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCC
Q 028745 106 DYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRA 185 (204)
Q Consensus 106 ~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~ 185 (204)
+||++|++.+ +|+|+|||++|||+||+|+|+|||.++++|||+||++||+++++||+++|++++++ +++++|||+||+
T Consensus 81 ~~L~~~~~~~-~I~A~~EG~~v~~~ep~l~Iegp~~e~~llET~lL~il~~~s~iATka~ri~~aa~-~~~l~dFG~Rr~ 158 (443)
T PRK12484 81 AWLAGLRFTG-DVRAVPEGTVVFPNEPLLEVTAPLIEAQLVETFLLNQINHQSLIASKAARCVLAAA-GRPVVDFGARRA 158 (443)
T ss_pred HHHHhCCCCc-eEEEEeCCeeecCCcEEEEEEEchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEECCCCCC
Confidence 9999999975 99999999999999999999999999999999999999999999999999999986 578999999999
Q ss_pred CChhhHH-Hh-hhHhhhcc
Q 028745 186 QVAHIIF-NL-LFELLIFV 202 (204)
Q Consensus 186 ~g~~a~~-~~-~~~~~~f~ 202 (204)
||++++. .+ ++|+..|.
T Consensus 159 ~~~~~a~~~~raa~i~gf~ 177 (443)
T PRK12484 159 HGTDAACYVARASYLAGAA 177 (443)
T ss_pred CChHHHHHHHHHHHhcCcc
Confidence 9999765 55 68887775
No 3
>TIGR01513 NAPRTase_put putative nicotinate phosphoribosyltransferase. Most members of this family are Gram-positive bacteria. An additional set of mutually closely related archaeal sequences score between the trusted and noise cutoffs.
Probab=100.00 E-value=2.9e-46 Score=344.26 Aligned_cols=165 Identities=48% Similarity=0.827 Sum_probs=155.8
Q ss_pred hhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHH
Q 028745 27 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFD 106 (204)
Q Consensus 27 ~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~ 106 (204)
+|+||+||+||+|+||++++++.+|+|+||+|+.|++++|+|++||+++|++|++++||+||++||++.+ +|+++|++
T Consensus 1 ~l~TD~Y~ltM~~~~~~~~~~~~~~~fe~~~R~~p~~~~~~v~~GL~~~l~~L~~~~ft~eei~yl~~~~--~f~~~f~~ 78 (443)
T TIGR01513 1 ALLTDLYELTMAQGYFREGKANQPAVFEVFFRKLPFGRGYAVFAGLEDLLEFLENFRFDAEDIEYLASLG--IFDDAFLD 78 (443)
T ss_pred CcchhHHHHHHHHHHHHhCCCCceEEEEEEECCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHhCC--CCCHHHHH
Confidence 4789999999999999999965569999999999999999999999999999999999999999999874 79999999
Q ss_pred HHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCC
Q 028745 107 YLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQ 186 (204)
Q Consensus 107 ~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~ 186 (204)
||++|++. ++|+|+|||+++||+||+|+|+|||.++++|||+||++||+++++||+++|++.+++ +++++|||+||+|
T Consensus 79 ~L~~~~~~-~~I~A~~EG~~v~~~ep~l~Iegp~~~~~llEt~lL~~i~~~s~iATka~r~~~aa~-~~~l~dFG~Rr~~ 156 (443)
T TIGR01513 79 YLREFRFS-GTVRALPEGSLVFPNEPLLQVEGPLIEAQLLETLVLNIINFQTLIATKAARIVLAAG-GKPLLEFGLRRAQ 156 (443)
T ss_pred HHHhCCCC-cEEEEecCCccccCCcEEEEEEEchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCeEEecCCCCCC
Confidence 99999996 799999999999999999999999999999999999999999999999999999986 5789999999999
Q ss_pred ChhhHHHhh
Q 028745 187 VAHIIFNLL 195 (204)
Q Consensus 187 g~~a~~~~~ 195 (204)
|.++++.++
T Consensus 157 ~~~~~~~~~ 165 (443)
T TIGR01513 157 GPDAALKAA 165 (443)
T ss_pred ccHHHHHHH
Confidence 998877644
No 4
>KOG2511 consensus Nicotinic acid phosphoribosyltransferase [Coenzyme transport and metabolism]
Probab=100.00 E-value=3.6e-47 Score=334.30 Aligned_cols=175 Identities=50% Similarity=0.810 Sum_probs=168.1
Q ss_pred CCCCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCC
Q 028745 19 GPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPG 98 (204)
Q Consensus 19 ~~~~~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~ 98 (204)
|+++|+.+.|+||+||+||++|||+++| |.+++|++++|++|+.++|.+++||+|+|.+|+||+||+|||+|+++.||
T Consensus 1 ~~e~~~vspL~tDlYkiTM~yA~wk~~~-de~~vy~~~~R~npf~g~~~~f~~Lee~irfl~N~~lt~eei~~lkk~lP- 78 (420)
T KOG2511|consen 1 MSEPPMVSPLDTDLYKITMAYAVWKAKP-DERVVYKYTNRSNPFGGNYEAFNWLEEQIRFLANLKLTDEEIDYLKKELP- 78 (420)
T ss_pred CCCCcccchhhhhHHHHHHHHHHHhhCC-CCceEEEeeecCCCCCchHHHHHHHHHHHHHHhhcCCCHHHHHHHHHhCC-
Confidence 4677899999999999999999999988 79999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee
Q 028745 99 SCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLL 178 (204)
Q Consensus 99 ~~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~ 178 (204)
+.++.|.+||++.+++.+.+.+++||+++||+.|.|+|+|||..+||+|||+|++|||+++++|++++.|..++....|+
T Consensus 79 ~~eeaf~eyl~~l~~s~~~~~aIsegSvvf~k~pli~i~Gp~~~~~l~E~plLnLvs~a~~~~~da~~~r~~~g~k~~~l 158 (420)
T KOG2511|consen 79 YLEEAFYEYLRGLNCSDHPEEAISEGSVVFEKKPLIRIEGPWKVTILYEIPLLNLVSEAYFKFVDADWHREVQGEKAEFL 158 (420)
T ss_pred CChHHHHHHHhhcCCCcCchhhcccCceeccCCceEEEecchhheeeeechHHHHhhhHHheeeccccchhccchhhHHh
Confidence 89999999999988887899999999999999999999999999999999999999999999999999999998878899
Q ss_pred eccCCCCCChhhHHHhh
Q 028745 179 EFGLRRAQVAHIIFNLL 195 (204)
Q Consensus 179 eFG~RR~~g~~a~~~~~ 195 (204)
|||+|||+|++++++|.
T Consensus 159 eFG~RR~rgp~G~m~As 175 (420)
T KOG2511|consen 159 EFGTRRRRGPQGAMKAS 175 (420)
T ss_pred hhhhhhccCCccchhhh
Confidence 99999999999999874
No 5
>PRK09243 nicotinate phosphoribosyltransferase; Validated
Probab=100.00 E-value=2e-45 Score=340.70 Aligned_cols=177 Identities=46% Similarity=0.761 Sum_probs=164.0
Q ss_pred CCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCC
Q 028745 22 NPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCE 101 (204)
Q Consensus 22 ~~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~ 101 (204)
++++++|+||+||+||+|+||+++|++.+|+|+||+|+.|+.++|.|++||+++|++|++++||+||++||++. + +|+
T Consensus 5 ~~~~~~L~TD~Ykltm~~~~~~~~~~~~~~~f~~~~R~~p~~~~~~v~aGl~~~l~~L~~~~ft~~ei~~l~~~-~-~f~ 82 (464)
T PRK09243 5 NDDSLALLTDLYELTMAQAYLRDGIHNRRAVFELFFRKLPFGRGYAVFAGLERLLEYLENLRFTEEDIEYLRSL-G-IFD 82 (464)
T ss_pred cccchHHHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcCCCCCcchHHHHHHHHHHHHHHhCCCCHHHHHHHHhc-C-CCC
Confidence 45677888999999999999999998889999999999998889999999999999999999999999999987 4 799
Q ss_pred hhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecc
Q 028745 102 DGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFG 181 (204)
Q Consensus 102 ~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG 181 (204)
++|++||+++++.. +|+++|||++++|++|+|+|+|||.++++|||+||++||+++.+||++++++++++ +++++|||
T Consensus 83 ~~f~~~L~~~~f~~-~I~a~pEG~~v~~~epvl~IeGp~~~~~l~Et~lL~il~~~s~iATka~r~~~~a~-~~~v~dFG 160 (464)
T PRK09243 83 EDFLDYLRNFRFTG-DVRAVPEGELVFPNEPLLRVEGPLAEAQLLETLLLNIINFQTLIATKAARIVSAAG-GRPLLEFG 160 (464)
T ss_pred HHHHHHHHhCCCCC-eEEEEeCCccccCCcEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCeEEecc
Confidence 99999999999975 99999999999999999999999999999999999999999999999999999986 57899999
Q ss_pred CCCCCChhhHHH-h-hhHhhhcc
Q 028745 182 LRRAQVAHIIFN-L-LFELLIFV 202 (204)
Q Consensus 182 ~RR~~g~~a~~~-~-~~~~~~f~ 202 (204)
+||+||.++++. + ++|+-.|.
T Consensus 161 ~Rr~~~~~~a~~~~raa~iggf~ 183 (464)
T PRK09243 161 SRRAQGPDAAVWAARAAYIGGFD 183 (464)
T ss_pred cccCCchHHHHHHHHHHhcCCcc
Confidence 999999987644 4 56766664
No 6
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi).
Probab=100.00 E-value=3.7e-45 Score=326.16 Aligned_cols=165 Identities=54% Similarity=0.927 Sum_probs=154.9
Q ss_pred hhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHH
Q 028745 27 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFD 106 (204)
Q Consensus 27 ~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~ 106 (204)
+|+||+||+||+|+++++++.|.+|+|+||+|+.|++.+|+|++||+++|++|++++||+||++||++.+ +|+++|++
T Consensus 1 ~l~tD~Y~ltm~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~v~~gl~~~l~~L~~l~~t~~ei~~l~~~~--~~~~~~~~ 78 (327)
T cd01570 1 ALLTDLYQLTMAQAYWKEGKHNKPAVFELFFRKLPFGGGYAVFAGLEELLEYLENFRFTEEDIDYLRSLG--IFDEEFLD 78 (327)
T ss_pred CcchhHHHHHHHHHHHHcCCCCCeEEEEEEECCCCCCCcccHHHHHHHHHHHHhcCCCCHHHHHHHHhCC--CCCHHHHH
Confidence 4789999999999999999447899999999999988999999999999999999999999999999874 69999999
Q ss_pred HHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCC
Q 028745 107 YLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQ 186 (204)
Q Consensus 107 ~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~ 186 (204)
||+++++. ++|+++|||++++|++|+|+|+|||.++++|||++|++||+++.+||++++++++++ +++++|||+||+|
T Consensus 79 ~L~~~~~~-v~i~a~~EG~~v~~~~pvl~IeGp~~~~~l~Et~lL~il~~~s~iATka~~~~~~~~-~~~~~dFG~Rr~~ 156 (327)
T cd01570 79 YLRGFRFT-GTIYAIPEGEVVFPNEPLLTVEGPLIEAQLLETLLLNLINFQTLIATKAARVRLAAG-GRPLLEFGLRRAQ 156 (327)
T ss_pred HHHhCCCC-ceEEEecCCceecCCcEEEEEEEcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CCEEEECCCCCCC
Confidence 99999985 899999999999999999999999999999999999999999999999999999885 5899999999999
Q ss_pred ChhhHHHhh
Q 028745 187 VAHIIFNLL 195 (204)
Q Consensus 187 g~~a~~~~~ 195 (204)
|.++++.++
T Consensus 157 s~~~~~~~~ 165 (327)
T cd01570 157 GPDAALSAA 165 (327)
T ss_pred ccHHHHHHH
Confidence 998766643
No 7
>cd01401 PncB_like Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria, archea and funghi.
Probab=100.00 E-value=8.5e-45 Score=328.27 Aligned_cols=159 Identities=25% Similarity=0.321 Sum_probs=144.6
Q ss_pred chhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCC-CCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhH
Q 028745 26 TPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPF-GGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGF 104 (204)
Q Consensus 26 ~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~-~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f 104 (204)
+.|+||+||+||+|+||+++|+ .+|+|+||+|+.|+ .++| ++||+++|++|++++||+||++||++.+| +|+++|
T Consensus 2 slLdTDlYklTM~qa~~~~~~~-~~a~f~f~~R~~p~~~~~~--~~gl~~~i~~l~~l~ft~~el~yL~~~~~-~~~~~f 77 (377)
T cd01401 2 SLLDTDLYKLTMQQAVLHHYPD-VQVTYEFTNRSPEDFLEEA--AEALREQIDHLANLRFSEEELAYLRRSLP-FLKPDY 77 (377)
T ss_pred cchhhHHHHHHHHHHHHHhCCC-CeEEEEEEECCCCCcchhH--HHHHHHHHHHHHhCCCCHHHHHHHHhccC-CCCHHH
Confidence 4567999999999999999995 69999999999987 7777 89999999999999999999999997777 899999
Q ss_pred HHHHhcCCCCceEEEEeeCCeeecC----CccEEEEEeccchhHHHHHHHHHHHHH---------------HHHHHHHHH
Q 028745 105 FDYLRGINCSDVEVHAITEGSVVFP----KVPLLRVEGPVAVVQLLETPFVNLINY---------------ASLVTTNAA 165 (204)
Q Consensus 105 ~~~L~~~~~~~v~I~a~~EG~lv~~----~eP~i~I~Gp~~~~~llEt~lL~iI~~---------------~~~vaT~a~ 165 (204)
++||++||++ |||.+++| |+|+|+|+|||.++++||||||+|||| .+.++||++
T Consensus 78 l~~L~~frf~-------~e~~~v~~~~~~~~~~i~i~Gp~~~~~L~Et~lL~iise~~~~~~~~~~~~~~~~~~~atKa~ 150 (377)
T cd01401 78 LDYLELFRLN-------PEEVVVRLDTGKGQLDIRISGPWKDTILYEVPLLAIVSEVYFRFRDADWDYEEQLEKLEEKLE 150 (377)
T ss_pred HHHHhcCCCC-------cCeeEEecCCCCCeEEEEEEEeHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHH
Confidence 9999999986 48888887 899999999999999999999999998 467899999
Q ss_pred HHHHHhC----CCCeeeeccCCCCCChhh---HHHhh
Q 028745 166 RHRFVAG----KSKMLLEFGLRRAQVAHI---IFNLL 195 (204)
Q Consensus 166 r~~~aa~----~~~~l~eFG~RR~~g~~a---~~~~~ 195 (204)
|++.++. ++++++|||+|||||+++ ++.++
T Consensus 151 r~~~~a~~~~~~~~~~~eFGtRRr~~~~~q~~~~~~~ 187 (377)
T cd01401 151 RLLEEAKRRDLNGFRFSDFGTRRRFSYEVQETVLKGL 187 (377)
T ss_pred HHHHHhhcccCCCCeEEEecccccCChHHHHHHHHHH
Confidence 9999982 268899999999999987 66665
No 8
>PRK05321 nicotinate phosphoribosyltransferase; Provisional
Probab=100.00 E-value=7.5e-45 Score=330.79 Aligned_cols=167 Identities=23% Similarity=0.374 Sum_probs=146.5
Q ss_pred CCCCcchhh-hhHHHHHHHHHHHHhCCCCceEEEEEEeecCC-CCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCC
Q 028745 21 TNPMVTPLL-NDLYQFTMAYAYWKAGKHDERAVFDLYFRKNP-FGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPG 98 (204)
Q Consensus 21 ~~~i~~~Ll-TD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p-~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~ 98 (204)
.+||+.+++ ||+||+||+|+||+++| +.+|+|+||+|++| +.++| +.||+++|++|++|+||+||++||++ ++
T Consensus 5 ~~~ii~slLdTDlYklTM~~a~~~~~~-~~~~~f~~f~R~~~~~~~~~--~~gl~~~i~~l~~l~ft~eei~yL~~-~~- 79 (400)
T PRK05321 5 ADPIIRSLLDTDFYKLTMQQAVLHHYP-DAQVEYEFICRNDEVDLAEY--IDEIREQLDHLCTLRLTDDELDYLRG-LP- 79 (400)
T ss_pred cchHHHHhHhhHHHHHHHHHHHHHhCC-CCeEEEEEEECCCCCcCchH--HHHHHHHHHHHHhCCCCHHHHHHHHh-CC-
Confidence 445666666 99999999999999998 68999999999998 77777 45999999999999999999999976 67
Q ss_pred CCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHH-----H----------HHHHHH
Q 028745 99 SCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINY-----A----------SLVTTN 163 (204)
Q Consensus 99 ~~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~-----~----------~~vaT~ 163 (204)
+|+++|++||++|++++-+|++.+|| ++|+|+|+|||.+++|||||||+|||| . +.++||
T Consensus 80 ~~~~~fl~~L~~frf~~~~v~~~~eg-----~~~~i~I~Gp~~~~~L~Et~lL~iise~~~~~~~~~~~~~~a~~~iatK 154 (400)
T PRK05321 80 FFKPDFLDWLRLFRLNPYEVTVSIDD-----GQLDIRIEGPWLETILWEVPLLAIISELYFRARSPEVLYAQAKRRLWEK 154 (400)
T ss_pred CCCHHHHHHHHhCCCCccEEEEEcCC-----CeEEEEEEEeHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Confidence 99999999999999987688888888 889999999999999999999999998 3 447888
Q ss_pred HHHHHHHhCC--CCeeeeccCCCCCChhhH---HHhhhHh
Q 028745 164 AARHRFVAGK--SKMLLEFGLRRAQVAHII---FNLLFEL 198 (204)
Q Consensus 164 a~r~~~aa~~--~~~l~eFG~RR~~g~~a~---~~~~~~~ 198 (204)
+.|++.+ ++ +++++|||+|||||++++ ++++-..
T Consensus 155 a~r~~~a-~~~~~~~~~eFGtRR~~~~~~~~~~v~a~~~~ 193 (400)
T PRK05321 155 IELLKAL-PDLSGFKIADFGTRRRFSFEWQEEVVEALKEG 193 (400)
T ss_pred HHHHHhc-cccCCCeEEEeccccccChhhHHHHHHHHHHH
Confidence 8888777 32 578999999999999974 6665443
No 9
>TIGR01514 NAPRTase nicotinate phosphoribosyltransferase. This model represents nicotinate phosphoribosyltransferase, the first enzyme in the salvage pathway of NAD biosynthesis from nicontinate (niacin). Members are primary proteobacterial but also include yeasts and Methanosarcina acetivorans. A related family, apparently non-overlapping in species distribution, is TIGR01513. Members of that family differ in substantially in sequence and have a long C-terminal extension missing from this family, but are proposed also to act as nicotinate phosphoribosyltransferase (see model TIGR01513).
Probab=100.00 E-value=3.3e-44 Score=325.67 Aligned_cols=159 Identities=25% Similarity=0.377 Sum_probs=140.5
Q ss_pred CcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCC-CCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCCh
Q 028745 24 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNP-FGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCED 102 (204)
Q Consensus 24 i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p-~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~ 102 (204)
|.+.|+||+||+||+|+||+++| +.+|+|+||+|+.| +.+++ ++||+++|++|++++||+||++||++.+| +|++
T Consensus 2 i~slLdTDlYklTM~qa~~~~~~-~~~~~f~f~~R~~p~~~~~~--~~gl~~~i~~l~~l~ft~eel~yL~~~~~-~~~~ 77 (394)
T TIGR01514 2 IRSLLDTDLYKITMHQAVFHNFP-DVHVTYEFICRSSQLFLKEA--AEALREEISALGNLRFTDDEIEYLKQELP-YLKS 77 (394)
T ss_pred cccchhhHHHHHHHHHHHHHhCC-CceEEEEEEECCCCCcchhH--HHHHHHHHHHHHHCCCCHHHHHHHHhccC-CCCH
Confidence 44556699999999999999998 68999999999988 65555 69999999999999999999999999777 9999
Q ss_pred hHHHHHhcCCCCc---eEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHH-------------H--HHHHHHH
Q 028745 103 GFFDYLRGINCSD---VEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINY-------------A--SLVTTNA 164 (204)
Q Consensus 103 ~f~~~L~~~~~~~---v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~-------------~--~~vaT~a 164 (204)
+|++||++|+|++ |+|++++||+ |+|+|+|||.+++|||||||+|||| + +.++||+
T Consensus 78 ~fl~~L~~frf~~e~~v~i~~~~eg~------~~i~i~Gp~~~~~L~EtplLaiine~~~~~~~~~~~~~~~~~~iatKa 151 (394)
T TIGR01514 78 DYIDYLRNFRFHPEEQVEVGIDDKGK------LDIRISGSWRDTILYEIPLLAIISELYFRFRDAEADYEQQLEVLESKL 151 (394)
T ss_pred HHHHHHHhCCCCCCceeEEeeCCCCc------EEEEEEeehHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHH
Confidence 9999999998754 6788777775 5899999999999999999999999 3 4489999
Q ss_pred HHHHHHhC------CCCeeeeccCCCCCChhhHH
Q 028745 165 ARHRFVAG------KSKMLLEFGLRRAQVAHIIF 192 (204)
Q Consensus 165 ~r~~~aa~------~~~~l~eFG~RR~~g~~a~~ 192 (204)
.|++.+++ .++.++|||||||+|.++.-
T Consensus 152 ~rl~~~a~~~~~~~~~~~~~eFGtRRr~s~~~q~ 185 (394)
T TIGR01514 152 DQLKAEIAAETMFENGFRFSEFGTRRRFSLEVQD 185 (394)
T ss_pred HHHHHHhhcccccCCCCeeEeecccccccHHHHH
Confidence 99998874 25789999999999998643
No 10
>COG1488 PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism]
Probab=100.00 E-value=5.4e-43 Score=319.58 Aligned_cols=175 Identities=41% Similarity=0.694 Sum_probs=159.7
Q ss_pred CCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCCh
Q 028745 23 PMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCED 102 (204)
Q Consensus 23 ~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~ 102 (204)
.+.++|+||+||+||+|+|++++|++.+|+|++++|+.|+.++|.+++|++++|++|++|+||+||++||+++ + ++++
T Consensus 10 ~i~~~L~TD~Ykltm~q~~~~~~~~~~~v~~e~~~R~~p~~~~~~~~~gl~~~l~~l~~l~fs~ee~~~L~~~-~-~~~~ 87 (405)
T COG1488 10 DIKSLLDTDLYKLTMLQAYLHDGPNNVTVVFEFFFRKLPFLGGYAVFAGLEEVLELLENLRFSEEEIAYLRSL-P-FFKP 87 (405)
T ss_pred HHhhhhHhHHHHHHHHHHHHhhCCCccEEEEEEEecCCcccchHHHHHHHHHHHHHHhhcCCCHHHHHHHhhc-c-cccH
Confidence 3556677999999999999999997689999999999998899999999999999999999999999999998 6 9999
Q ss_pred hHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccC
Q 028745 103 GFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGL 182 (204)
Q Consensus 103 ~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~ 182 (204)
+|++||+ ++. ++|+++|||++++|+||+|+|+|||.++++|||++|+|||+.+.+||+++|++.+++++++++|||+
T Consensus 88 ~fl~~L~--~f~-~~i~a~~eg~~~~~~ep~l~i~G~~~e~~l~Et~lL~ii~~~~~iatka~r~~~~a~~~~~v~dFGt 164 (405)
T COG1488 88 DFLNYLR--RFP-LDIYAVPEGTVVFPNEPVLRIEGPYLETILLETPLLGIINEASLIATKAARVKDAAGKGFPVLDFGT 164 (405)
T ss_pred HHHHHHh--hCC-CceEEEeccccccCCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEeccC
Confidence 9999999 554 6899999999999999999999999999999999999999999999999999999954689999999
Q ss_pred CCCCChhh--HHHhhhHhhhcc
Q 028745 183 RRAQVAHI--IFNLLFELLIFV 202 (204)
Q Consensus 183 RR~~g~~a--~~~~~~~~~~f~ 202 (204)
||+||.++ ....++|+-.|+
T Consensus 165 Rr~~~~~~~~~~~raa~igg~~ 186 (405)
T COG1488 165 RRRHSADAQPWIGRAAYIGGFD 186 (405)
T ss_pred cccccchhHHHHHHHHHHhccc
Confidence 99999953 555566665554
No 11
>PHA02594 nadV nicotinamide phosphoribosyl transferase; Provisional
Probab=100.00 E-value=1.3e-40 Score=307.10 Aligned_cols=177 Identities=23% Similarity=0.287 Sum_probs=158.9
Q ss_pred CCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHH-HhcCCCCHHHHHHHHhhCC---
Q 028745 22 NPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRF-IANFKLTEEEITFVRDSLP--- 97 (204)
Q Consensus 22 ~~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~-L~~l~ft~eei~yL~~~~~--- 97 (204)
.+++..|+||.||+||+++|++. ...+.|.+++|++|+. +++|++|||+.|+. |.+ +||+++|+|+++.++
T Consensus 6 ~~~n~~L~tD~Yk~th~~qYp~~---~~~~~~~~~~R~~~~~-~~~vf~GLq~~i~~~l~~-~~t~~~i~~~~~~~~~~~ 80 (470)
T PHA02594 6 ANVNIILMTDSYKLSHWSQYPKG---TDYVMFYLEPRGGKFF-DKVVVFGIQYFVKKYFFE-PITMEVVEEAHELVKAHL 80 (470)
T ss_pred cccchhHhhhhhHHHHHHhCCCC---CcEEEEEEEecCCCCC-CEEEEeeHHHHHHHHHhc-CCCHHHHHHHHHhhhhcc
Confidence 45667788999999999999876 3579999999999874 79999999999997 888 999999999998742
Q ss_pred C--CCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028745 98 G--SCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVA----VVQLLETPFVNLINYASLVTTNAARHRFVA 171 (204)
Q Consensus 98 ~--~~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~----~~~llEt~lL~iI~~~~~vaT~a~r~~~aa 171 (204)
+ .|+++|++||+++++.+++|+|+|||++|||++|+++|+||.. +++++||.||++||+++++||+|+|+|+++
T Consensus 81 g~~~f~~~~~~~L~~~~~~p~~I~AvpEGtvvf~~~Pll~Ve~~~~~f~w~~~~lET~lL~~i~~~s~vAT~A~r~~~~~ 160 (470)
T PHA02594 81 GKDVFNREHWEALHDLGYLPIEVRAVPEGTVVPVKVPVLTIENTHPDFFWLAGYLETVILRGVWYPSTVATLSRECKKIL 160 (470)
T ss_pred CCCccCHHHHHHHHhCCCCcceEEEecCCceecCCCCEEEEEeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2889999999999998899999999999999999999999984 999999999999999999999999999997
Q ss_pred C-------CC------CeeeeccCCCCCChh-hHHHhhhHhhhccc
Q 028745 172 G-------KS------KMLLEFGLRRAQVAH-IIFNLLFELLIFVC 203 (204)
Q Consensus 172 ~-------~~------~~l~eFG~RR~~g~~-a~~~~~~~~~~f~~ 203 (204)
+ ++ ++++|||+||+||.| |+.+++|||.+|.-
T Consensus 161 ~~~~~~t~~~~~~~~~~~l~DFG~Rra~g~eaa~~~~aAhl~gF~g 206 (470)
T PHA02594 161 KKYLKETSDNEDEVLDFQLHDFGARGMSSGESAALGGLAHLYNFKG 206 (470)
T ss_pred HHHhhhccCccccccCceeeeccCCCCCChHHHHHHHHHHhcCCcc
Confidence 5 23 589999999999998 46689999999964
No 12
>PRK09198 putative nicotinate phosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=300.20 Aligned_cols=174 Identities=18% Similarity=0.187 Sum_probs=154.6
Q ss_pred CcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHH-HHhcCCCCHHHHHHHHhhC---CCC
Q 028745 24 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIR-FIANFKLTEEEITFVRDSL---PGS 99 (204)
Q Consensus 24 i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~-~L~~l~ft~eei~yL~~~~---~~~ 99 (204)
.+..|+||+||+||+++| |++++++|++|.|+.|+.++|+|++||+++|+ +|+++ ||+++++|+++.. ...
T Consensus 5 ~~~~L~TD~Yklth~~~Y----~~~~~~vf~~f~rr~p~~~~~~v~~GL~~~l~~yl~~~-ft~~~i~~~~~~~~~~~~~ 79 (463)
T PRK09198 5 LNPILNTDSYKASHRLQY----PPGTTYLYSYLESRSGGRYDKVVFFGLQYFLKEYLIQP-ITEAFIDEAKALLVAHGLP 79 (463)
T ss_pred cchhHhHhhHHHHHHHhc----cCCCcEEEEEEEEeCCCCCCeEEEEEHHHHHHHHHHhc-CCHHHHHHHHhhhhhccCc
Confidence 356788999999999999 44678999999999998899999999999999 99999 9999999999873 113
Q ss_pred CChhHHHHHhc-C--CCCceEEEEeeCCeeecCCccEEEEEeccchhH----HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028745 100 CEDGFFDYLRG-I--NCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQ----LLETPFVNLINYASLVTTNAARHRFVAG 172 (204)
Q Consensus 100 ~~~~f~~~L~~-~--~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~----llEt~lL~iI~~~~~vaT~a~r~~~aa~ 172 (204)
|++++++++.. + ++ +++|+|+|||++|||++|+++|+||..+++ ++||.||++||++|++||+|+|+|++++
T Consensus 80 f~~~~~~~~~~~~~g~~-p~~I~AvpEGtvv~~~~Pll~V~~~~~e~~wL~~~lET~lL~~i~~~s~vAT~A~r~~~~~~ 158 (463)
T PRK09198 80 FNRAGWRRIVDKYGGYL-PLRIKAVPEGSVVPVHNVLMTIENTDPEFFWLPNYLETLLLRNVWYPSTVATISWEYKQLIR 158 (463)
T ss_pred cCHHHHHHHHHhcCCCC-ceEEEEecCCceecCCCCEEEEEeCcHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887776665 4 45 589999999999999999999999999998 6999999999999999999999999975
Q ss_pred C------------CCeeeeccCCCCCChh-hHHHhhhHhhhccc
Q 028745 173 K------------SKMLLEFGLRRAQVAH-IIFNLLFELLIFVC 203 (204)
Q Consensus 173 ~------------~~~l~eFG~RR~~g~~-a~~~~~~~~~~f~~ 203 (204)
. +++++|||+||+||.+ |+.+++|||.+|.-
T Consensus 159 ~~~~~t~~~~~~~~~~l~dFG~Rr~~~~eaa~~~~aA~l~gF~G 202 (463)
T PRK09198 159 QYLEKTADDLDFLPFQLHDFGARGMSSLESAALGGAAHLVSFLG 202 (463)
T ss_pred HhhhhcccccccCCCeEEecCCCCCCchHHHHHHHHHHHhCCCc
Confidence 2 6789999999999997 46789999999963
No 13
>cd01567 NAPRTase_PncB Nicotinate phosphoribosyltransferase (NAPRTase) family. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products.
Probab=100.00 E-value=3.9e-38 Score=282.07 Aligned_cols=173 Identities=39% Similarity=0.595 Sum_probs=156.1
Q ss_pred hhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHH
Q 028745 27 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFD 106 (204)
Q Consensus 27 ~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~ 106 (204)
.|+||+||+||++++++.+| +..|+|+|++|+.|+..++.+++||+++|++|++++||+||++||++. . .+.+.|..
T Consensus 1 ~L~TD~Yk~tm~~~~~~~~~-~~~v~~~~~~R~~~~~~~~~v~~gl~~~l~~l~~~~~~~~~~~~l~~~-~-~~~~~~~~ 77 (343)
T cd01567 1 LLDTDLYKLTMMQAYLYPYP-NTRVVFEFTFRSNPFGGDYIVFAGLEEVLKLLENLRFTEEEIEYLKKL-L-IFGEFFLY 77 (343)
T ss_pred CccchHHHHHHHHHHHhCCC-CeEEEEEEEEcCCCCCCCeeHHHHHHHHHHHHHhCCCCHHHHHHHHhc-C-CCcHHHHH
Confidence 36799999999999988777 689999999999887778899999999999999999999999999987 3 67888888
Q ss_pred HHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------CC
Q 028745 107 YLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK-----------SK 175 (204)
Q Consensus 107 ~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~-----------~~ 175 (204)
++...++ +++|+++|||+++++++|+|+|+|||.++++|||+||+++|+.+.+||++.+.+.++.. ++
T Consensus 78 ~~~~~~~-~~~i~a~~eG~~~~~~~~~i~IeG~~~~~~~~Et~lL~i~~~~t~~at~~~~~~~~a~~~~~~~~~~~~~~~ 156 (343)
T cd01567 78 LLFLGKL-PLEIYALPEGTVVFPKEPLLTIEGPWPEAGLLETPLLAIWNEATSIATKAARKKLAAGGLLETKDNLEELGF 156 (343)
T ss_pred HhhcCCC-ceEEEEeCCcccccCCCeEEEEEechHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Confidence 8775554 58999999999999999999999999999999999999999999999999988887753 37
Q ss_pred eeeeccCCCCCChh-hHHHhhhHhhhccc
Q 028745 176 MLLEFGLRRAQVAH-IIFNLLFELLIFVC 203 (204)
Q Consensus 176 ~l~eFG~RR~~g~~-a~~~~~~~~~~f~~ 203 (204)
+++|||+||++|.+ +...+.+|+++|..
T Consensus 157 ~~~dFGtRr~~s~~~~~~~~~a~~~~~~~ 185 (343)
T cd01567 157 KLHDFGTRRRHSPEAALSGGRAALIGGFG 185 (343)
T ss_pred eEEecCCCCcCChHHHHHHHHHHhcCCCC
Confidence 89999999999986 67888999998864
No 14
>cd01569 PBEF_like pre-B-cell colony-enhancing factor (PBEF)-like. The mammalian members of this group of nicotinate phosphoribosyltransferases (NAPRTases) were originally identified as genes whose expression is upregulated upon activation in lymphoid cells. In general, nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis.
Probab=100.00 E-value=1.3e-37 Score=282.74 Aligned_cols=171 Identities=20% Similarity=0.183 Sum_probs=151.9
Q ss_pred hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHH-----HHHHHhhCC---CC
Q 028745 28 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEE-----ITFVRDSLP---GS 99 (204)
Q Consensus 28 LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~ee-----i~yL~~~~~---~~ 99 (204)
|+||+||+||.++|.+ +++.+|++|.|+.|...+++|++|||..|+.+...+||+++ .++++.+.. ..
T Consensus 2 L~TD~Yk~th~~qYp~----gt~~vfs~f~~R~~~~~~~~v~~GLq~~l~~~l~~~f~~~~~i~~a~~~~~~~~~~~~~~ 77 (407)
T cd01569 2 LATDSYKVSHRLQYPP----GTTAVYSYLEPRGGKYYDQTVFFGLQYFLKKYLIDPVNRDFFIDEAEAVFEAHFGMNDLP 77 (407)
T ss_pred cccchHHHHHHHhccC----CCceEEEEEEecCCCCCCeEEEeeHHHHHHHHHhcCCCHHHhHHHHHHHHHhcCcccccC
Confidence 6799999999998854 56799999999998778899999999999999999999999 447766521 03
Q ss_pred CChhHHHHHhc---CCCCceEEEEeeCCeeecCCccEEEEEeccchh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028745 100 CEDGFFDYLRG---INCSDVEVHAITEGSVVFPKVPLLRVEGPVAVV----QLLETPFVNLINYASLVTTNAARHRFVAG 172 (204)
Q Consensus 100 ~~~~f~~~L~~---~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~----~llEt~lL~iI~~~~~vaT~a~r~~~aa~ 172 (204)
|++++++||.+ +++ +++|+|+|||++|||++|+++|+||..++ +++||.||++||+++++||+|+|+|++++
T Consensus 78 f~~~~~~~i~~l~~~~l-p~~I~AvpEGtvv~~~~Pll~Ve~t~~e~~Wl~~~lET~lL~~iw~~s~vAT~A~r~k~~~~ 156 (407)
T cd01569 78 FNEDGWRHILELHDGYL-PIEIRAVPEGTVVPTKNVLMTVENTDPDFFWLTNYLETILLRNVWYPSTVATISREYKKILR 156 (407)
T ss_pred cCHHHHHHHHHHcCCCC-ceEEEEecCCceecCCCCEEEEEecchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998 444 68999999999999999999999999888 99999999999999999999999999995
Q ss_pred C------------CCeeeeccCCCCCChh-hHHHhhhHhhhccc
Q 028745 173 K------------SKMLLEFGLRRAQVAH-IIFNLLFELLIFVC 203 (204)
Q Consensus 173 ~------------~~~l~eFG~RR~~g~~-a~~~~~~~~~~f~~ 203 (204)
+ +++++|||+||+||.| |+.+|+|||.+|.-
T Consensus 157 ~~~~~t~~~~~~~~~~l~DFG~Rra~~~eaa~~~~aAhL~~F~g 200 (407)
T cd01569 157 KYAKETSDNLEFLPFQLHDFGMRGMSSLESAALGGAAHLVNFKG 200 (407)
T ss_pred HHhhhcccccccCCCeEEecCCCCCCchHHHHHHHHHHHcCCcc
Confidence 2 6789999999999997 57789999999964
No 15
>PRK07188 nicotinate phosphoribosyltransferase; Provisional
Probab=99.86 E-value=2.3e-21 Score=174.60 Aligned_cols=131 Identities=18% Similarity=0.285 Sum_probs=117.0
Q ss_pred CCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCCh
Q 028745 23 PMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCED 102 (204)
Q Consensus 23 ~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~ 102 (204)
.|..+..||.|++....++-+.++ +..++++|+.|+.+ .|++|+++++++|+.+.++
T Consensus 12 ~i~~g~~td~YF~~t~~il~~~~~-~~~~~~~~~~R~~~-----~VlaGleea~~ll~~l~~~----------------- 68 (352)
T PRK07188 12 RIGEGWYSAVYFLKTREIIEKFNP-NNIVTMQFFQRREN-----AVLCGTDEVIALLKTFAKD----------------- 68 (352)
T ss_pred HHhcCchhHHHHHHHHHHHHHhCC-CCeEEEEEEEeCCC-----eEEecHHHHHHHHHHcCCC-----------------
Confidence 388889999999999999988888 68999999999543 6789999999999865332
Q ss_pred hHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccC
Q 028745 103 GFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGL 182 (204)
Q Consensus 103 ~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~ 182 (204)
.++++++++|||++++|+||+++|+||..+++++|+.+|+++++.|.+||++++++.+++ +.++.+|||
T Consensus 69 ----------~~~~~i~a~~eG~~v~~gepvl~i~G~~~~l~~~Et~iLnlL~~~SgIAT~a~r~v~aA~-~~~~~~~gT 137 (352)
T PRK07188 69 ----------PSKLKIRYLKDGDIINPFETVLEIEGPYENFGFLEGIIDGILARRTSVATNAYNVVQAAN-EKPVIFMGD 137 (352)
T ss_pred ----------ccceEEEEcCCCCEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEec
Confidence 235789999999999999999999999999999999999999999999999999999997 577999999
Q ss_pred CCCCC
Q 028745 183 RRAQV 187 (204)
Q Consensus 183 RR~~g 187 (204)
||.|+
T Consensus 138 RKt~p 142 (352)
T PRK07188 138 RADHY 142 (352)
T ss_pred CCCCc
Confidence 99643
No 16
>PRK08662 nicotinate phosphoribosyltransferase; Reviewed
Probab=99.86 E-value=2.4e-21 Score=174.14 Aligned_cols=138 Identities=31% Similarity=0.466 Sum_probs=123.7
Q ss_pred CCCCCCCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhh
Q 028745 16 SVSGPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDS 95 (204)
Q Consensus 16 ~~~~~~~~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~ 95 (204)
+.-..++++...++||.|+.+|.+++|++++ +..+++++|.|++| .+++.|++|++++.+.++.+
T Consensus 4 ~~~~~~~~~~~~l~~D~Y~~~t~~~l~~~g~-~~~~~~~i~~R~~p-~~~~~i~aG~~~a~~~~~~~------------- 68 (343)
T PRK08662 4 FYIASEEEIKSGKTTDIYFERTVEILEHAGK-NPKVVAEVTASSLP-KGEWGVFAGLEEVLELLEGK------------- 68 (343)
T ss_pred CCCCCHHHHHhhhHHHHHHHHHHHHHHHcCC-CCeEEEEEEEecCC-CCCCEEEccHHHHHHHHhhC-------------
Confidence 3334445677888899999999999999999 78999999999999 78889999999999888742
Q ss_pred CCCCCChhHHHHHhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 028745 96 LPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSK 175 (204)
Q Consensus 96 ~~~~~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~ 175 (204)
+++|++++||+.++||+|+++|+||+..+.++|+++|+++++.|.+||++++++.+++ +.
T Consensus 69 -------------------~~~v~~~~dG~~v~~g~~il~i~G~~~~ll~~Er~~Ln~L~~~SgIAT~t~~~v~aa~-~~ 128 (343)
T PRK08662 69 -------------------PVDVYALPEGTLFDPKEPVMRIEGPYLEFGIYETALLGILAHASGIATAAARCKEAAG-DK 128 (343)
T ss_pred -------------------CcEEEEeCCCCEecCCceEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 2567899999999999999999999999999999999999999999999999999986 57
Q ss_pred eeeeccCCCCCCh
Q 028745 176 MLLEFGLRRAQVA 188 (204)
Q Consensus 176 ~l~eFG~RR~~g~ 188 (204)
.+..||||+.+..
T Consensus 129 ~v~~~~TRKt~Pg 141 (343)
T PRK08662 129 PVLSFGARHVHPA 141 (343)
T ss_pred cEEEeccCCCCHh
Confidence 8999999999864
No 17
>cd00516 PRTase_typeII Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate phosphoribosyltransferase (NAPRTase), to be used in the synthesis of NAD. QAPRTase catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide, an important step in the de novo synthesis of NAD. NAPRTase catalyses a similar reaction leading to NAMN and pyrophosphate, using nicotinic acid an PPRP as substrates, used in the NAD salvage pathway.
Probab=99.86 E-value=6.1e-21 Score=166.06 Aligned_cols=136 Identities=32% Similarity=0.461 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhc
Q 028745 31 DLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRG 110 (204)
Q Consensus 31 D~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~ 110 (204)
|+||++|.++ +..+ +..++|+|++|+.| +.|++|++++++.++.++|
T Consensus 1 D~y~~~~~~~--~~~~-~~~~~~~~~~R~~~----~~v~~Gl~~~~~~l~~l~~-------------------------- 47 (281)
T cd00516 1 DLYKLTMIQA--YPPP-DTRATAEFTAREDP----YGVLAGLEEALELLELLRF-------------------------- 47 (281)
T ss_pred ChhHHHHHhh--hCCC-CCEEEEEEEEecCC----CEEEcCHHHHHHHHHhcCC--------------------------
Confidence 8999999999 5555 68999999999985 5779999999999987643
Q ss_pred CCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeeeeccCCCCCChh
Q 028745 111 INCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK-SKMLLEFGLRRAQVAH 189 (204)
Q Consensus 111 ~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~-~~~l~eFG~RR~~g~~ 189 (204)
+....+++++||+.+.+++|+++|+|||.++.++|+++|+++++.|.+||++++++.++.+ ++++.+||||++++--
T Consensus 48 --~~~~~~~~~~eG~~v~~g~~vl~i~G~~~~~~~~E~~~Lnil~~~sgiAt~t~~~v~~~~~~~~~~~~~gtRk~~p~~ 125 (281)
T cd00516 48 --PGPLVILAVPEGTVVEPGEPLLTIEGPARELLLLERVLLNLLQRLSGIATATARYVEAAKGANTKVHDFGTRKTTPGL 125 (281)
T ss_pred --CCceEEEECCCCCEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeEEeecCCCCcch
Confidence 1235788899999999999999999999999999999999999999999999999988863 2789999999999965
Q ss_pred hHHHhhhHhhhc
Q 028745 190 IIFNLLFELLIF 201 (204)
Q Consensus 190 a~~~~~~~~~~f 201 (204)
..+..-|+++.+
T Consensus 126 ~~~~~~A~~~gG 137 (281)
T cd00516 126 RLLEKYAVLIGG 137 (281)
T ss_pred hHHhhHHHhhcc
Confidence 566666666543
No 18
>cd01571 NAPRTase_B Nicotinate phosphoribosyltransferase (NAPRTase), subgroup B. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products.
Probab=99.74 E-value=7.7e-17 Score=142.77 Aligned_cols=124 Identities=33% Similarity=0.544 Sum_probs=112.4
Q ss_pred hhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHH
Q 028745 28 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDY 107 (204)
Q Consensus 28 LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~ 107 (204)
.+||.|+......+.++++ +..++++++.|++| |.|++|++++++.++.+
T Consensus 2 ~~~~~yf~~t~~~~~~~~~-~~~~~~~i~~r~~~----~~v~aG~~~~~~~~~~~------------------------- 51 (302)
T cd01571 2 RFTDVYFLRTRKILEKKGP-NPTVTMEFTQRSLP----WAVLCGLEEVLALLEGL------------------------- 51 (302)
T ss_pred cchHHHHHHHHHHHHHhCC-CCeEEEEEEEEcCc----hHHHhhHHHHHHHHhCC-------------------------
Confidence 4699999999999877777 67899999999988 78999999999887742
Q ss_pred HhcCCCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCC
Q 028745 108 LRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQV 187 (204)
Q Consensus 108 L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g 187 (204)
+++|++++||+.++|++|+++|+||...+...|+.+|+++++.|.+||++++++.++++ ..+..||||+.++
T Consensus 52 -------~~~i~~~~dG~~v~~g~~i~~i~G~~~~ll~~Er~~Ln~L~~~SgIAT~t~~~v~~~~~-~~~~i~~TRKt~P 123 (302)
T cd01571 52 -------PVKVYALPEGTIFNPKEPVLRIEGPYQDFGELETAILGILARASSIATNAARVKLAAGD-KPVISFGDRRDHP 123 (302)
T ss_pred -------CeEEEEeCCCCEECCCCcEEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcEEEeecccCCc
Confidence 47888899999999999999999999999999999999999999999999999999974 6799999999987
Q ss_pred hh
Q 028745 188 AH 189 (204)
Q Consensus 188 ~~ 189 (204)
.-
T Consensus 124 g~ 125 (302)
T cd01571 124 AI 125 (302)
T ss_pred ch
Confidence 74
No 19
>cd01568 QPRTase_NadC Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.
Probab=99.14 E-value=3.8e-10 Score=98.61 Aligned_cols=105 Identities=24% Similarity=0.234 Sum_probs=90.8
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~EG 124 (204)
+.+..++.+|+.|.. .|++|++++.+.++.+ + ++++ ++++||
T Consensus 24 ~~~~~~~~~i~~r~~------~v~~G~~~~~~i~~~~-----------------------------~--~~~v~~~~~dG 66 (269)
T cd01568 24 PGDAPATATLIAKEE------GVLAGLEVAEEVFELL-----------------------------D--GIEVEWLVKDG 66 (269)
T ss_pred CCCceEEEEEEecCC------EEEECHHHHHHHHHHh-----------------------------C--CeEEEEEeCCC
Confidence 446789999999975 5689999888877632 1 3566 678999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
+.+.|++|+++|+||.......|..+|+++.+.|.+||++++++.++++ +.+.-|+||+.+..
T Consensus 67 ~~v~~g~~i~~i~G~~~~l~~~Er~~ln~L~~~sgIAT~t~~~v~~a~~-~~~~i~~TRKt~Pg 129 (269)
T cd01568 67 DRVEAGQVLLEVEGPARSLLTAERVALNLLQRLSGIATATRRYVEAARG-TKARIADTRKTTPG 129 (269)
T ss_pred CEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEeecCCCChh
Confidence 9999999999999999999999999999999999999999999999974 67899999998875
No 20
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport. In general, QPRTases are part of the de novo synthesis pathway of NAD in both prokaryotes and eukaryotes. They catalyse the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide.
Probab=98.94 E-value=6.2e-09 Score=91.21 Aligned_cols=105 Identities=25% Similarity=0.263 Sum_probs=85.9
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEE-EeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVH-AITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I~-a~~EG 124 (204)
|.+.+++..++.|.. .|++|++++...++.+ ++++. +++||
T Consensus 24 ~~~~~~~~~~~ak~~------gv~aG~~~~~~~~~~~--------------------------------~~~v~~~~~dG 65 (272)
T cd01573 24 IGEQPGKITFRARDP------GVLCGTEEAARILELL--------------------------------GLEVDLAAASG 65 (272)
T ss_pred CCCCeEEEEEEECCC------EEEECHHHHHHHHHHc--------------------------------CcEEEEEcCCC
Confidence 445678888888865 5689999888877642 24553 68999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeeeeccCCCCCCh
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG-KSKMLLEFGLRRAQVA 188 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~-~~~~l~eFG~RR~~g~ 188 (204)
+.+.||+|+++|+||.......|..+|+++.+.|.+||++++++.+++ .+..+.-++||+.+..
T Consensus 66 ~~v~~g~~i~~i~G~~~~ll~~Er~~ln~l~~~SGIAT~t~~~v~~~~~~~~~~~i~~TRKt~Pg 130 (272)
T cd01573 66 SRVAAGAVLLEAEGPAAALHLGWKVAQTLLEWASGIATATAEMVAAARAVNPDIVVATTRKAFPG 130 (272)
T ss_pred CEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCCCcc
Confidence 999999999999999999999999999999999999999999999884 1334566679998843
No 21
>cd01572 QPRTase Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.
Probab=98.86 E-value=2.5e-08 Score=87.23 Aligned_cols=106 Identities=22% Similarity=0.235 Sum_probs=90.6
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~EG 124 (204)
+.+..++.+|+.|.. .|++|++++.+.++.+ + .+++| +..+||
T Consensus 24 ~~~~~~~~~~~ar~~------~v~~G~~~~~~i~~~~-----------------------------~-~~l~v~~~~~dG 67 (268)
T cd01572 24 PPDARAEARLIAKEE------GVLAGLPVAEEVFELL-----------------------------D-PGIEVEWLVKDG 67 (268)
T ss_pred CCCCeEEEEEEEcCC------EEEECHHHHHHHHHHc-----------------------------C-CCeEEEEEeCCC
Confidence 446789999999975 5689999988877742 0 13566 667999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
+.+-|++|+++|+|+.......|..+|+++.+.|.+||++++++.++.+ +.+.=++||..+..
T Consensus 68 ~~v~~g~~i~~i~G~~~~ll~~Er~~ln~L~~~SGIAT~t~~~v~~a~~-~~~~i~~TRKt~Pg 130 (268)
T cd01572 68 DRVEPGQVLATVEGPARSLLTAERTALNFLQRLSGIATLTRRYVEALAG-TKARILDTRKTTPG 130 (268)
T ss_pred CEecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEeCCCCChh
Confidence 9999999999999999999999999999999999999999999999964 67888999987764
No 22
>TIGR00078 nadC nicotinate-nucleotide pyrophosphorylase. Synonym: quinolinate phosphoribosyltransferase (decarboxylating)
Probab=98.85 E-value=2.9e-08 Score=86.74 Aligned_cols=104 Identities=21% Similarity=0.244 Sum_probs=88.4
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~EG 124 (204)
+.+..++.+|+.|.. .|++|++++.+.++.+ ++++ +.++||
T Consensus 22 ~~~~~~~~~~~ar~~------~v~~G~~~~~~i~~~~--------------------------------~~~v~~~~~dG 63 (265)
T TIGR00078 22 PGSTRATASLVAKED------GVLAGLPVARRVFEQL--------------------------------GVQVEWLVKDG 63 (265)
T ss_pred CCCceEEEEEEecCC------EEEECHHHHHHHHHHc--------------------------------CeEEEEEeCCC
Confidence 445678999999975 5689999999887742 1453 678999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
+.+.|++|+++|+||.......|..+|+++.+.|.+||.+++++.++++ ..+.=++||..+..
T Consensus 64 ~~v~~g~~i~~i~G~~~~il~~Er~~ln~l~~~SGIAT~t~~~v~~~~~-~~~~i~~TRKt~Pg 126 (265)
T TIGR00078 64 DRVEPGEVVAEVEGPARSLLTAERTALNFLGRLSGIATATRKYVEAARG-TNVRIADTRKTTPG 126 (265)
T ss_pred CEecCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEecCCCChh
Confidence 9999999999999999999999999999999999999999999999864 34777889988764
No 23
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.49 E-value=1.3e-06 Score=76.87 Aligned_cols=104 Identities=22% Similarity=0.270 Sum_probs=84.8
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCeee
Q 028745 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVV 127 (204)
Q Consensus 48 ~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I~a~~EG~lv 127 (204)
+..++..++.|.. .|++|++++.+.++.+ + . .++. ..+||+.+
T Consensus 28 ~~~~~~~~~ar~~------gi~aG~~~a~~i~~~l--------------~---------------~-~v~~-~~~dG~~v 70 (278)
T PRK08385 28 DVTARAVIIAKQD------GVIAGLEEAKALFEHF--------------G---------------V-KVEV-RKRDGEEV 70 (278)
T ss_pred CCeEEEEEEecCC------eEEeCHHHHHHHHHHc--------------C---------------C-EEEE-EcCCCCEe
Confidence 5678888888886 4689999988877642 1 1 2333 36999999
Q ss_pred cCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeeeeccCCCCCCh
Q 028745 128 FPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG-KSKMLLEFGLRRAQVA 188 (204)
Q Consensus 128 ~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~-~~~~l~eFG~RR~~g~ 188 (204)
.||+++++++||.......|-.+|+++.+.|.+||.+++++.++. .+..+.=++||..+..
T Consensus 71 ~~g~~i~~i~G~~~~ll~~Er~~ln~l~~~SGIAT~T~~~v~~~~~~~~~~~i~~TRKt~Pg 132 (278)
T PRK08385 71 KAGEVILELKGNARAILLVERTALNIIGRMSGIATETRKLVELVKAVNPKVRVAGTRKTLPG 132 (278)
T ss_pred cCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeCCCChh
Confidence 999999999999999999999999999999999999999998884 2345666799987754
No 24
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.47 E-value=1.4e-06 Score=76.60 Aligned_cols=103 Identities=16% Similarity=0.212 Sum_probs=85.4
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCeee
Q 028745 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVV 127 (204)
Q Consensus 48 ~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I~a~~EG~lv 127 (204)
+..++.+++.|.. .|++|++++.+.++.+ . . .++. ..+||+.+
T Consensus 28 ~~~~~a~i~ar~~------~v~~G~~~a~~i~~~l--------------~---------------~-~~~~-~~~dG~~v 70 (273)
T PRK05848 28 DFKATAKIIAKSE------GVFSGEKYALELLEMT--------------G---------------I-ECVF-TIKDGERF 70 (273)
T ss_pred CCeEEEEEEEcCC------EEEECHHHHHHHHHHc--------------C---------------C-EEEE-EcCCCCEe
Confidence 4568888888875 5689999988877632 1 1 2333 57999999
Q ss_pred cCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 128 FPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 128 ~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
.||+|+++++||.......|-.+|+++.+.|.+||.+++++.++++ ..+.=++||.-+..
T Consensus 71 ~~g~~i~~i~G~a~~ll~~Er~~ln~l~~~SGIAT~t~~~v~~~~~-~~~~i~~TRKt~Pg 130 (273)
T PRK05848 71 KKGDILMEIEGDFSMLLKVERTLLNLLQHSSGIATLTSRYVEALES-HKVKLLDTRKTRPL 130 (273)
T ss_pred cCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEecCCCCcc
Confidence 9999999999999999999999999999999999999999999864 56788899886543
No 25
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.40 E-value=3.5e-06 Score=74.61 Aligned_cols=106 Identities=22% Similarity=0.224 Sum_probs=84.2
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCee
Q 028745 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSV 126 (204)
Q Consensus 48 ~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~EG~l 126 (204)
+..++..++.|.. .|++|++++.+.++.+ +. .-.+++ +..+||+.
T Consensus 42 ~~~~~a~i~are~------gilaG~~~a~~if~~~-------------~~---------------~~~~~v~~~~~dG~~ 87 (289)
T PRK07896 42 DAVATASVVSREA------GVVAGLDVALLVLDEV-------------LG---------------TDGYEVLDRVEDGAR 87 (289)
T ss_pred CCeEEEEEEecCC------EEEECHHHHHHHHHHh-------------cC---------------CCceEEEEEcCCCCE
Confidence 4567778888854 5689999888776421 11 102344 45699999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 127 v~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
+.||+|+++++|+.......|..+|+++.+.|.+||.+++++.++. +..+.=++||.-+..
T Consensus 88 v~~g~~i~~i~G~a~~ll~~ER~aLN~L~~~SGIAT~t~~~v~~~~-~~~~~i~~TRKT~Pg 148 (289)
T PRK07896 88 VPPGQALLTVTAPTRGLLTAERTMLNLLCHLSGIATATAAWVDAVA-GTKAKIRDTRKTLPG 148 (289)
T ss_pred ecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCCCc
Confidence 9999999999999999999999999999999999999999999985 455667799987654
No 26
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=98.33 E-value=5.1e-06 Score=73.15 Aligned_cols=104 Identities=17% Similarity=0.169 Sum_probs=83.8
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCC-ceEEEEeeCCee
Q 028745 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCS-DVEVHAITEGSV 126 (204)
Q Consensus 48 ~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~-~v~I~a~~EG~l 126 (204)
+.+++..++.|.. .|++|++++.+.++.+ . .+ .+++ ..+||+.
T Consensus 34 ~~~~~~~i~ar~~------gi~~G~~~~~~i~~~~--------------~---------------~~~~~~~-~~~dG~~ 77 (277)
T PRK05742 34 ERLAKATVITREA------AVIAGTAWVDAVFRQL--------------D---------------PRVAVHW-QVADGER 77 (277)
T ss_pred CcEEEEEEEECCC------EEEECHHHHHHHHHHc--------------C---------------CceEEEE-EeCCCCE
Confidence 4567778777775 5689999888777642 1 11 1333 4699999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 127 v~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
+.||+++++++||.......|-.+|+++.+.|.+||.+++++.++. +..+.=++||.-+..
T Consensus 78 v~~g~~i~~i~G~~~~ll~~ER~~ln~l~~~SGIAT~T~~~v~~~~-~~~~~i~~TRKt~Pg 138 (277)
T PRK05742 78 VSANQVLFHLEGPARSLLTGERSALNFLQLLSGVATRARHYADLVA-GTQVKLLDTRKTLPG 138 (277)
T ss_pred EcCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCCCc
Confidence 9999999999999999999999999999999999999999998885 355666799887654
No 27
>PRK09016 quinolinate phosphoribosyltransferase; Validated
Probab=97.99 E-value=7.3e-05 Score=66.44 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=80.5
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCee
Q 028745 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSV 126 (204)
Q Consensus 48 ~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~EG~l 126 (204)
+..++..++.|.. .|++|++.+-+.++.+ . + ++++ +..+||+.
T Consensus 53 ~~~~~~~i~ake~------gi~aG~~~a~~vf~~l--------------~---------------~-~~~v~~~~~dG~~ 96 (296)
T PRK09016 53 DSRSHATIITRED------GVFCGKRWVEEVFIQL--------------G---------------D-DVTIEWHVDDGDV 96 (296)
T ss_pred CCEEEEEEEEcCC------EEEECHHHHHHHHHHc--------------C---------------C-CeEEEEEcCCCCE
Confidence 4456777777765 4679988877666532 1 1 2333 45699999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 127 v~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
+.||+++++++|+.......|-.+|+++.+.|.+||.+++++.++. +..+.=.+||.-...
T Consensus 97 v~~G~~i~~i~G~a~~ll~~ER~~LN~L~~~SGIAT~T~~~v~~~~-~~~~~i~~TRKT~Pg 157 (296)
T PRK09016 97 ITANQTLFELTGPARVLLTGERTALNFVQTLSGVATEVRRYVELLA-GTNTQLLDTRKTLPG 157 (296)
T ss_pred ecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCCCc
Confidence 9999999999999999999999999999999999999999998885 344445668876543
No 28
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.94 E-value=7.8e-05 Score=66.03 Aligned_cols=103 Identities=16% Similarity=0.112 Sum_probs=81.6
Q ss_pred ceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCCeee
Q 028745 49 ERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEGSVV 127 (204)
Q Consensus 49 ~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~EG~lv 127 (204)
.+++..++.|.. .|++|++.+-+.++.+ . . ++++ +..+||+.+
T Consensus 41 ~~~~~~i~ar~~------gv~~G~~~a~~i~~~~--------------~---------------~-~~~~~~~~~dG~~v 84 (288)
T PRK07428 41 TTGQAKWIAKES------GVIAGLPIAARVFQLL--------------D---------------P-QVSFTPLVAEGAAC 84 (288)
T ss_pred cEEEEEEEecCC------eEEECHHHHHHHHHHc--------------C---------------C-cEEEEEEcCCCCEe
Confidence 567888888875 4679998887776642 1 1 2332 246999999
Q ss_pred cCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 128 FPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 128 ~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
.+|+++++++||.......|-.+|+++.+.|.+||.++++..++. +..+.=.+||.-...
T Consensus 85 ~~g~~i~~~~G~a~~ll~~eR~~lN~l~~~SGIAT~T~~~v~~~~-~~~~~i~~TRKt~Pg 144 (288)
T PRK07428 85 ESGQVVAEIEGPLDALLMGERVALNLAMRLSGIATLTRQYVEKIA-DLPTQLVDTRKTTPG 144 (288)
T ss_pred cCCCEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCCCc
Confidence 999999999999999999999999999999999999999998885 344556678766543
No 29
>PRK08072 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.87 E-value=0.00019 Score=63.22 Aligned_cols=104 Identities=18% Similarity=0.129 Sum_probs=80.9
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEE-EeeCCee
Q 028745 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVH-AITEGSV 126 (204)
Q Consensus 48 ~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I~-a~~EG~l 126 (204)
+..++..++.|.+ .|++|++.+-+.++.+ . . ++++. ..+||+.
T Consensus 32 ~~~~~~~~~ar~~------gv~~G~~~a~~i~~~~--------------~---------------~-~~~v~~~~~dG~~ 75 (277)
T PRK08072 32 NLLGEGVFLAKDT------GVFAGRLVIEEGYKLL--------------D---------------E-RIEVELHKKDGDL 75 (277)
T ss_pred CCeEEEEEEecCC------EEEECHHHHHHHHHHc--------------C---------------C-ceEEEEEeCCCCE
Confidence 3367778788776 4579998877666532 1 1 23332 3499999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCCh
Q 028745 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQVA 188 (204)
Q Consensus 127 v~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g~ 188 (204)
+.+|+++++++|+.......|-.+|+++.+.|.+||.+++++.++. +..+-=.+||.....
T Consensus 76 v~~g~~i~~~~G~~~~ll~~er~~ln~l~~~sGIAT~t~~~v~~~~-~~~~~i~~TRKt~Pg 136 (277)
T PRK08072 76 VKKGEIIATVQGPVASLLTGERVILNLIQRMSGIATMTRKAVLALD-DSHIRICDTRKTTPG 136 (277)
T ss_pred EcCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEecCCCCcc
Confidence 9999999999999999999999999999999999999999998885 344566788866543
No 30
>PLN02716 nicotinate-nucleotide diphosphorylase (carboxylating)
Probab=97.83 E-value=0.0002 Score=64.01 Aligned_cols=103 Identities=18% Similarity=0.192 Sum_probs=80.4
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCC-CceEEEEeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINC-SDVEVHAITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~-~~v~I~a~~EG 124 (204)
+.+..++..|+.|.. .|++|++.+-..++.+ . + -.++. ..+||
T Consensus 44 ~~~~~~~a~i~ake~------gvlaG~~~a~~vf~~l--------------~---------------~~~~v~~-~~~dG 87 (308)
T PLN02716 44 PGDMEAEATFLAKAD------GVLAGIALADMVFEEV--------------D---------------PSLKVEW-AAIDG 87 (308)
T ss_pred CCCCeEEEEEEeCCC------EEEECHHHHHHHHHHc--------------C---------------CCeEEEE-EeCCC
Confidence 335567888888875 4679999887766632 1 1 12443 46999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCC
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQV 187 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g 187 (204)
+.+.||+++++++||.......|-.+|+++.+.|.+||.+++++.++.+ ..+. +||.-..
T Consensus 88 ~~v~~G~~i~~v~G~a~~il~~ER~aLN~L~~~SGIAT~T~~~V~~~~~-~~I~--~TRKT~P 147 (308)
T PLN02716 88 DFVHKGLKFGKVTGPAHSILVAERVVLNFMQRMSGIATLTKAMADAAKP-ACIL--ETRKTAP 147 (308)
T ss_pred CEecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-CEEe--eecCCCC
Confidence 9999999999999999999999999999999999999999999988863 3344 3776544
No 31
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.76 E-value=0.00029 Score=62.25 Aligned_cols=105 Identities=19% Similarity=0.182 Sum_probs=81.4
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCC-ceEEEEeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCS-DVEVHAITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~-~v~I~a~~EG 124 (204)
|.+..++..++.|.. .|++|++.+-..++.+ . +. .++.. .+||
T Consensus 36 ~~~~~~~~~i~ake~------gv~aG~~~a~~vf~~~--------------~---------------~~~~~~~~-~~dG 79 (281)
T PRK06106 36 PADHRATVVLVARQP------GVIAGLDLARLAFRLV--------------D---------------PEIEMRRH-LPDG 79 (281)
T ss_pred CCCCeEEEEEEecCC------eEEECHHHHHHHHHHh--------------C---------------CceEEEEE-eCCC
Confidence 335567778777765 4679998776655532 1 11 24443 5999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCC
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQV 187 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g 187 (204)
+.+.+|+++++++|+.......|-.+|+++.+.|.+||.+++++.++.+ ..+-=.+||.-..
T Consensus 80 ~~v~~g~~i~~i~G~a~~ll~~ER~~LN~L~~~SGIAT~T~~~V~~~~~-~~~~i~~TRKT~P 141 (281)
T PRK06106 80 AAVAPGDVIATISGPARGLLTAERTALNFLCHLSGIATATASIVAAIAG-TKAKVVCTRKTTP 141 (281)
T ss_pred CEEcCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEeCCCCC
Confidence 9999999999999999999999999999999999999999999988853 3456677776554
No 32
>PRK06559 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.64 E-value=0.00045 Score=61.27 Aligned_cols=105 Identities=19% Similarity=0.253 Sum_probs=78.7
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE--EE-ee
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV--HA-IT 122 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I--~a-~~ 122 (204)
+.+..++..++.|.. .|++|++.+-..++.+ . . .+++ .. .+
T Consensus 37 ~~~~~~~~~~~are~------gvlaG~~~a~~if~~l--------------~---------------~-~~~~~~~~~~~ 80 (290)
T PRK06559 37 DHHGQAKVSLFAKEA------GVLAGLTVFQRVFTLF--------------D---------------A-EVTFQNPHQFK 80 (290)
T ss_pred CCCCeEEEEEEecCC------eEEECHHHHHHHHHHh--------------C---------------C-cEEEEEeecCC
Confidence 334567777777776 4679998877766532 1 1 1333 22 49
Q ss_pred CCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeeccCCCCCC
Q 028745 123 EGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFGLRRAQV 187 (204)
Q Consensus 123 EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG~RR~~g 187 (204)
||+.+.||+++++++||.......|-..|+++.+.|.+||..+++..++.+ ..+-=.+||--..
T Consensus 81 dG~~v~~G~~i~~v~G~a~~ll~~ER~alN~l~~~SGIAT~T~~~V~~~~~-~~~~i~~TRKT~P 144 (290)
T PRK06559 81 DGDRLTSGDLVLEIIGSVRSLLTCERVALNFLQHLSGIASMTAAYVEALGD-DRIKVFDTRKTTP 144 (290)
T ss_pred CCCEecCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEeecCCCC
Confidence 999999999999999999999999999999999999999999999888742 2223336775543
No 33
>PF02749 QRPTase_N: Quinolinate phosphoribosyl transferase, N-terminal domain; InterPro: IPR022412 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0016763 transferase activity, transferring pentosyl groups; PDB: 3L0G_B 1QAP_A 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 2I14_C 1X1O_B 2B7Q_B ....
Probab=97.52 E-value=0.00054 Score=50.10 Aligned_cols=75 Identities=25% Similarity=0.416 Sum_probs=59.0
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~EG 124 (204)
+.+..++..++.|.. .|++|++.+-..++.+ ++++ +..+||
T Consensus 13 ~~~~~~~a~i~are~------gV~aG~~~~~~i~~~l--------------------------------~~~v~~~~~dG 54 (88)
T PF02749_consen 13 PPDKTGTATIIARED------GVLAGLEEAEEIFEKL--------------------------------GLEVEWLVKDG 54 (88)
T ss_dssp CTTSEEEEEEEESSS------EEE-SHHHHHHHHHHC--------------------------------TEEEEESS-TT
T ss_pred CCCCEEEEEEEeCCC------EEEECHHHHHHHHhhc--------------------------------cEEEEEEeCCC
Confidence 446789999999986 4679999887766642 2333 235999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHH
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYAS 158 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~ 158 (204)
+.+-||+++++++||.......|-.+|+++.+.|
T Consensus 55 ~~v~~g~~i~~i~G~a~~ll~~ER~~LN~l~~~S 88 (88)
T PF02749_consen 55 DRVEPGDVILEIEGPARALLTAERTALNFLQRLS 88 (88)
T ss_dssp -EEETTCEEEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCcEEEEEEeCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999998865
No 34
>TIGR01334 modD putative molybdenum utilization protein ModD. The gene modD for a member of this family is found with molybdenum transport genes modABC in Rhodobacter capsulatus. However, disruption of modD causes only a 4-fold (rather than 500-fold for modA, modB, modC) change in the external molybdenum concentration required to suppress an alternative nitrogenase. ModD proteins are highly similar to nicotinate-nucleotide pyrophosphorylase (also called quinolinate phosphoribosyltransferase). The function unknown.
Probab=97.49 E-value=0.0012 Score=58.29 Aligned_cols=102 Identities=16% Similarity=0.231 Sum_probs=79.3
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCe
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGS 125 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I~a~~EG~ 125 (204)
|.+.+++..++.|.. .|++|++.+-+.++.+ +. .+++. .+||+
T Consensus 28 ~~~~~~~~~~~are~------gv~~G~~~~~~i~~~l-----------------------------~~-~~~~~-~~dG~ 70 (277)
T TIGR01334 28 IQDHPAHITFTARDE------GIVSGVSEAAKLLKQL-----------------------------GA-SIDYA-VPSGS 70 (277)
T ss_pred CCCceEEEEEEEcCC------EEEECHHHHHHHHHHc-----------------------------CC-EEEEE-eCCCC
Confidence 445678888888876 4579999887766632 11 34554 59999
Q ss_pred eecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCeeeeccCCCCC
Q 028745 126 VVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG---KSKMLLEFGLRRAQ 186 (204)
Q Consensus 126 lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~---~~~~l~eFG~RR~~ 186 (204)
.+.||+++++++||......-|=..|+++.+.|.+||..+++..++. .+.++.+ ||--.
T Consensus 71 ~v~~g~~i~~~~G~a~~ll~~eR~alN~l~~~SGIAT~T~~~V~~~~~~~~~~~I~~--TRKT~ 132 (277)
T TIGR01334 71 RALAGTLLLEAKGSAGQLHQGWKSAQSVLEWSCGVATYTHKMVTLAKKISPMAVVAC--TRKAI 132 (277)
T ss_pred EeCCCCEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEe--cCCCC
Confidence 99999999999999999999999999999999999999999887774 2344444 55443
No 35
>PRK06096 molybdenum transport protein ModD; Provisional
Probab=97.32 E-value=0.0026 Score=56.36 Aligned_cols=89 Identities=11% Similarity=0.225 Sum_probs=72.6
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEEEEeeCCe
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGS 125 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I~a~~EG~ 125 (204)
|.+..++..++.|.+ .|++|++.+-..++.+ +. .+++. .+||+
T Consensus 29 ~~~~~~~~~~~ake~------gv~aG~~~a~~if~~l-----------------------------~~-~v~~~-~~dG~ 71 (284)
T PRK06096 29 IGHQPGYIEFFHRQG------GCVSGISVACKMLTTL-----------------------------GL-TIDDA-VSDGS 71 (284)
T ss_pred CCCceEEEEEEEcCC------EEEECHHHHHHHHHHc-----------------------------CC-EEEEE-eCCCC
Confidence 445667888888875 4579999877766532 11 34554 59999
Q ss_pred eecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028745 126 VVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVA 171 (204)
Q Consensus 126 lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa 171 (204)
.+-+|+++++++||-.....-|=..|+++.+.|.+||.++++..++
T Consensus 72 ~v~~G~~i~~~~G~a~~ll~~eR~alN~l~~~SGIAT~T~~~V~~~ 117 (284)
T PRK06096 72 QANAGQRLISAQGNAAALHQGWKAVQNVLEWSCGVSDYLAQMLALL 117 (284)
T ss_pred EeCCCCEEEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988776
No 36
>PRK06543 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.27 E-value=0.0032 Score=55.71 Aligned_cols=92 Identities=20% Similarity=0.148 Sum_probs=74.3
Q ss_pred CCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCC-ceEEEEeeCC
Q 028745 46 KHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCS-DVEVHAITEG 124 (204)
Q Consensus 46 ~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~-~v~I~a~~EG 124 (204)
+.+..++..++.|.. .|++|++.+.+.++.+ . +. .++. ..+||
T Consensus 31 ~~~~~~~a~i~are~------gvlaG~~~a~~if~~~--------------~---------------~~~~v~~-~~~dG 74 (281)
T PRK06543 31 PASATASAHLTAREP------GVFSGIDVFAAAFRLV--------------D---------------PAITVTL-AVADG 74 (281)
T ss_pred CCCCeEEEEEEecCC------eEEECHHHHHHHHHHh--------------C---------------CCeEEEE-EeCCC
Confidence 445568888888876 4679999887766532 1 11 2444 35999
Q ss_pred eeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 028745 125 SVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK 173 (204)
Q Consensus 125 ~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~ 173 (204)
+.+-+|+++++++||......-|=..|+++.+.|.+||.++++..++.+
T Consensus 75 ~~v~~G~~i~~~~G~a~~ll~~eR~alN~l~~~SGIAT~T~~~V~~~~~ 123 (281)
T PRK06543 75 ERFEAGDILATVTGPARSVLTAERIALNFTQRMSGIATLTAAFVDAVNG 123 (281)
T ss_pred CEecCCCEEEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999888753
No 37
>PRK06978 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=97.06 E-value=0.0056 Score=54.47 Aligned_cols=89 Identities=17% Similarity=0.174 Sum_probs=72.2
Q ss_pred CceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCC-ceEEEEeeCCee
Q 028745 48 DERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCS-DVEVHAITEGSV 126 (204)
Q Consensus 48 ~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~-~v~I~a~~EG~l 126 (204)
+..++..++.|.. .|++|++.+-..++.+ . +. .+++. .+||+.
T Consensus 50 ~~~~~a~i~are~------gvlaG~~~a~~if~~l--------------~---------------~~~~v~~~-~~dG~~ 93 (294)
T PRK06978 50 GEPRRARVIVREE------AVLCGVPWFDAVMRAV--------------D---------------PSIEVTWR-YREGDR 93 (294)
T ss_pred CceEEEEEEEcCC------EEEECHHHHHHHHHHh--------------C---------------CCeEEEEE-cCCCCE
Confidence 4567888888875 4679999877766532 1 11 24443 599999
Q ss_pred ecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028745 127 VFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG 172 (204)
Q Consensus 127 v~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~ 172 (204)
+.||+++++++||......-|=..|+++.+.|.+||.++++..++.
T Consensus 94 v~~G~~i~~~~G~a~~lL~~ER~aLN~l~~~SGIAT~T~~~V~~~~ 139 (294)
T PRK06978 94 MTADSTVCELEGPARALLTAERNALNFLQLLSGVASATRRYVDRIA 139 (294)
T ss_pred eCCCCEEEEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999887774
No 38
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=96.49 E-value=0.023 Score=50.15 Aligned_cols=92 Identities=21% Similarity=0.244 Sum_probs=72.8
Q ss_pred CCCCceEEEEEEeecCCCCCcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcCCCCceEE-EEeeC
Q 028745 45 GKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEV-HAITE 123 (204)
Q Consensus 45 ~~~~~~v~f~ff~R~~p~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~~~~~v~I-~a~~E 123 (204)
.|.+.+++-.++.|.. .|++|+..+...++.+ .+ .+++ +..+|
T Consensus 29 ~~~~~~a~a~i~ake~------GvvaG~~~a~~~f~~l-----------------------------~~-~i~~~~~~~D 72 (280)
T COG0157 29 IPEDRKAEAVIIAKEA------GVVAGLDVAEEVFELL-----------------------------GP-SIEIQWLVKD 72 (280)
T ss_pred cCCCCeEEEEEEEcCC------cEEEcHHHHHHHHHHh-----------------------------CC-ceEEEEEcCC
Confidence 3545667777777775 3578998877766632 11 1333 34699
Q ss_pred CeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028745 124 GSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG 172 (204)
Q Consensus 124 G~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~ 172 (204)
|+-+.||+.+++++||-.....-|=..|+++...|.+||..+++..++.
T Consensus 73 G~~v~~g~~i~~~~G~a~~lL~~ER~aLN~L~~lSGIAT~T~~~V~~~~ 121 (280)
T COG0157 73 GDRVKPGDVLAEIEGPARALLTAERTALNFLQHLSGIATATARMVEALR 121 (280)
T ss_pred CCEeCCCCEEEEEeccHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999887775
No 39
>KOG3008 consensus Quinolinate phosphoribosyl transferase [Nucleotide transport and metabolism]
Probab=89.47 E-value=0.84 Score=39.62 Aligned_cols=54 Identities=28% Similarity=0.310 Sum_probs=49.1
Q ss_pred EEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 028745 119 HAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAG 172 (204)
Q Consensus 119 ~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~ 172 (204)
|..+||+.+.|+--+-.|+||-....+-|-.+|++++..|.+||.+..+..++.
T Consensus 75 W~~KeGs~l~p~~~vaKv~GpAh~IllAERvaLN~l~R~SGIATa~~~~~~aAr 128 (300)
T KOG3008|consen 75 WFLKEGSKLVPVARVAKVRGPAHCILLAERVALNTLARCSGIATAAAAAVEAAR 128 (300)
T ss_pred EEecCCCeecccceeEeecCcceeeeehHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 456999999999889999999999999999999999999999999888877774
No 40
>KOG1159 consensus NADP-dependent flavoprotein reductase [Energy production and conversion]
Probab=69.37 E-value=20 Score=34.55 Aligned_cols=63 Identities=30% Similarity=0.593 Sum_probs=39.7
Q ss_pred HHHhcCCC-CceEEEEeeCCeeecCCc---cEEEEEeccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecc
Q 028745 106 DYLRGINC-SDVEVHAITEGSVVFPKV---PLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFG 181 (204)
Q Consensus 106 ~~L~~~~~-~~v~I~a~~EG~lv~~~e---P~i~I~Gp~~~~~llEt~lL~iI~~~~~vaT~a~r~~~aa~~~~~l~eFG 181 (204)
+||..+++ +.|.++ +..|++.+|.. |+|-| ||=--+ +|+.++|.+... .++...++.||
T Consensus 405 ~wl~sL~~g~~i~~~-v~~g~l~~p~~~~~PlImV-GPGTGv----APfRa~i~er~~-----------q~~~~~~lFfG 467 (574)
T KOG1159|consen 405 NWLASLKPGDEIPIK-VRPGTLYFPSDLNKPLIMV-GPGTGV----APFRALIQERIY-----------QGDKENVLFFG 467 (574)
T ss_pred HHHhhcCCCCeEEEE-EecCccccCCCCCCCeEEE-cCCCCc----ccHHHHHHHHHh-----------hccCCceEEEe
Confidence 35555555 346665 47899999987 99988 664333 466666655432 22223489999
Q ss_pred CCCC
Q 028745 182 LRRA 185 (204)
Q Consensus 182 ~RR~ 185 (204)
+|-.
T Consensus 468 CR~K 471 (574)
T KOG1159|consen 468 CRNK 471 (574)
T ss_pred cccC
Confidence 9965
No 41
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=40.00 E-value=63 Score=27.83 Aligned_cols=57 Identities=19% Similarity=0.359 Sum_probs=37.2
Q ss_pred CcchHHHHHHHHHHHHhcCCCCHHHHHHHHhhCCCCCChhHHHHHhcC--CCCceEEEEeeCC
Q 028745 64 GEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGI--NCSDVEVHAITEG 124 (204)
Q Consensus 64 ~~~~v~~gl~~~i~~L~~l~ft~eei~yL~~~~~~~~~~~f~~~L~~~--~~~~v~I~a~~EG 124 (204)
.+| ..-++.+++.|..-..|.++|...-+.+| +.|.+.++++.. +..++++..+.+|
T Consensus 40 ~~w--t~~m~~vl~~L~~~gvt~~~I~~~l~~ip--~~pgm~~~l~~l~~~~~~~~~~IiSDa 98 (234)
T PF06888_consen 40 GGW--TEYMDRVLQLLHEQGVTPEDIRDALRSIP--IDPGMKELLRFLAKNQRGFDLIIISDA 98 (234)
T ss_pred cch--HHHHHHHHHHHHHcCCCHHHHHHHHHcCC--CCccHHHHHHHHHhcCCCceEEEEeCC
Confidence 445 46678888888877789999876656556 777777766654 2233444444443
No 42
>PF14568 SUKH_6: SMI1-KNR4 cell-wall; PDB: 2PRV_A.
Probab=38.70 E-value=23 Score=25.71 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=18.4
Q ss_pred HHHHHHHHhhCCCCCChhHHHHHhcCCC
Q 028745 86 EEEITFVRDSLPGSCEDGFFDYLRGINC 113 (204)
Q Consensus 86 ~eei~yL~~~~~~~~~~~f~~~L~~~~~ 113 (204)
+++|+-+++.++.-|+++|.+||+.++.
T Consensus 1 ee~I~~~E~~Lg~~lP~~Yk~fL~~~~g 28 (120)
T PF14568_consen 1 EEEIEEAEKKLGVKLPEDYKEFLKEYNG 28 (120)
T ss_dssp -HHHHHHHHHHTS---HHHHHHHHHC-S
T ss_pred ChHHHHHHHHhCCCCCHHHHHHHHHcCC
Confidence 4677777776654699999999998765
No 43
>PF14567 SUKH_5: SMI1-KNR4 cell-wall; PDB: 2PAG_A.
Probab=38.05 E-value=24 Score=27.90 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=19.0
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhcC
Q 028745 84 LTEEEITFVRDSLPGSCEDGFFDYLRGI 111 (204)
Q Consensus 84 ft~eei~yL~~~~~~~~~~~f~~~L~~~ 111 (204)
-|+|+|..+++.++.-|+++|.+||..+
T Consensus 22 pd~e~I~~~Ee~L~i~lP~eyk~fL~~~ 49 (132)
T PF14567_consen 22 PDDEQIVEAEEQLGISLPEEYKEFLLEA 49 (132)
T ss_dssp --HHHHHHHHHHHT----HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHC
Confidence 6788899998876544899999999864
No 44
>smart00860 SMI1_KNR4 SMI1 / KNR4 family. Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation.
Probab=33.08 E-value=54 Score=22.83 Aligned_cols=30 Identities=23% Similarity=0.224 Sum_probs=23.1
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhcCCC
Q 028745 84 LTEEEITFVRDSLPGSCEDGFFDYLRGINC 113 (204)
Q Consensus 84 ft~eei~yL~~~~~~~~~~~f~~~L~~~~~ 113 (204)
.|+++|+.+++.++..++++|.++|+..+.
T Consensus 2 ~s~~~i~~~e~~lg~~LP~~y~~f~~~~~g 31 (129)
T smart00860 2 ASEEEIAELEKKLGIKLPEDYKEFLLLHNG 31 (129)
T ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHHcCC
Confidence 366788888776654699999999987654
No 45
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=32.54 E-value=90 Score=27.64 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=58.0
Q ss_pred CccccCCCCCCCCCCCcchhhhhHHHHHHHHHHHHhCCCCceEEEEEEeecCC--CCCcchHHHHHHHHHHHHhcCCCCH
Q 028745 9 SENQAGRSVSGPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNP--FGGEYTIFAGLEECIRFIANFKLTE 86 (204)
Q Consensus 9 ~~~~~~~~~~~~~~~i~~~LlTD~Ykltm~~a~~~~~~~~~~v~f~ff~R~~p--~~~~~~v~~gl~~~i~~L~~l~ft~ 86 (204)
+-.|+.++|+...+ ...+++-|+-.+.+-+-+.+|-. +..+.+ -...| |.+|-...-+.+....|++
T Consensus 40 ~g~~~~s~~~~~~~---~~~~~~~~~~~~~~l~~~Y~PiE-------~d~~~~~~eK~~~-m~eWw~k~~~l~~~~~~~~ 108 (277)
T TIGR01544 40 DGKRCPTCHGIFDN---CKLLTDECRKKLLQLKEKYYPIE-------VDPVLTVEEKYPY-MVEWWTKSHGLLVQQAFPK 108 (277)
T ss_pred CCCCCcchHhHHhh---CCCCCHHHHHHHHHHHhhcccee-------cCCCCChHHhhhH-HHHHHHHHHHHHhcCCCCH
Confidence 33566667766663 46778999988777666666631 122221 12344 6799999999999999999
Q ss_pred HHHHHHHh--hCCCCCChh---HHHHHh
Q 028745 87 EEITFVRD--SLPGSCEDG---FFDYLR 109 (204)
Q Consensus 87 eei~yL~~--~~~~~~~~~---f~~~L~ 109 (204)
++++.+.+ .++ +.|. |+++|+
T Consensus 109 e~i~~~v~~~~l~--l~pG~~efl~~L~ 134 (277)
T TIGR01544 109 AKIKEIVAESDVM--LKDGYENFFDKLQ 134 (277)
T ss_pred HHHHHHHhhcCCc--cCcCHHHHHHHHH
Confidence 99998875 322 4444 555554
No 46
>PF09346 SMI1_KNR4: SMI1 / KNR4 family (SUKH-1); InterPro: IPR018958 Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation [, ]. Yeast members of this family are involved in the regulation of cell wall assembly. Saccharomyces cerevisiae (Baker's yeast) protein KNR4 (SMI1) has a regulatory role in chitin deposition and in cell wall assembly []. It was originally identified as a regulator of chitin synthase expression (acting as a repressor) [] and of 1,3-beta-glucan synthase levels []. It was shown to localise in patches at presumptive bud sites in unbudded cells and at the incipient bud site during bud emergence []. KNR4 is believed to connect the PKC1-SLT2 MAPK pathway with cell proliferation. It has been shown to interact with BCK2, a gene involved in cell cycle progression in S. cerevisiae (forming a complex) to allow PKC1 to coordinate the cell cycle (cell proliferation) with cell wall integrity [, ]. PKC1 plays an essential role in cell wall integrity and cell proliferation through a bifurcated PKC1/mitogen-activated protein (MAP) kinase pathway. KNR4 also interacts with the tyrosine-tRNA synthetase protein encoded by TYS1 and is involved in sporulation process []. Note: previously reported evidence that KNR4 may interact with nuclear matrix-association region [] may be due to an artefact [].; PDB: 3D5P_A 2ICG_A.
Probab=28.67 E-value=45 Score=24.00 Aligned_cols=27 Identities=30% Similarity=0.426 Sum_probs=18.1
Q ss_pred CCHHHHHHHHhhCCCCCChhHHHHHhc
Q 028745 84 LTEEEITFVRDSLPGSCEDGFFDYLRG 110 (204)
Q Consensus 84 ft~eei~yL~~~~~~~~~~~f~~~L~~ 110 (204)
.|++||+.+++.++.-++++|.++|+.
T Consensus 2 ~t~~~I~~~E~~lg~~LP~~yk~fl~~ 28 (130)
T PF09346_consen 2 ATEEEIQELEEKLGVRLPDDYKEFLKE 28 (130)
T ss_dssp --HHHHHHHHHHHTS---HHHHHHHH-
T ss_pred CCHHHHHHHHHHhCCCCcHHHHHHHHh
Confidence 478899999887654599999999994
No 47
>PHA00650 hypothetical protein
Probab=27.61 E-value=82 Score=22.05 Aligned_cols=60 Identities=23% Similarity=0.393 Sum_probs=35.6
Q ss_pred CHHHHHHHHhhCCCCCChhHHHHHhcC-CCCceEEEEeeCCeeecCCccEEEEEeccchhHHHHHHHHHHH
Q 028745 85 TEEEITFVRDSLPGSCEDGFFDYLRGI-NCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLI 154 (204)
Q Consensus 85 t~eei~yL~~~~~~~~~~~f~~~L~~~-~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI 154 (204)
|.|+++-|+.. | -.-+|+|||++- .-++ +.+..|+|--. -.-+||-.+-.|-.+-=|+.|
T Consensus 8 tredldalagt-p--ahgefldylrgsitrkq-daqtypdgydt------pdyegptldpvwqdvedlsti 68 (82)
T PHA00650 8 TREDLDALAGT-P--AHGEFLDYLRGSITRKQ-DAQTYPDGYDT------PDYEGPTLDPVWQDVEDLSTI 68 (82)
T ss_pred cHHHHHHhcCC-C--cchhHHHHHhhhccccc-ccccCCCCCCC------CCCcCCCcChHHHhHHHHHHH
Confidence 56677777654 3 566899999873 2222 45556887542 234677766555544444444
No 48
>PF08225 Antimicrobial19: Pseudin antimicrobial peptide; InterPro: IPR013156 Pseudins are a subfamily of the FSAP family (Frog Secreted Active Peptides) extracted from the skin of the paradoxical frog Pseudis paradoxa (Paradoxical frog). The pseudins belong to the class of cationic, amphipathic-helical antimicrobial peptides [].; GO: 0006952 defense response
Probab=25.91 E-value=78 Score=17.29 Aligned_cols=14 Identities=50% Similarity=0.968 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhc
Q 028745 68 IFAGLEECIRFIAN 81 (204)
Q Consensus 68 v~~gl~~~i~~L~~ 81 (204)
|+.||.|+|+.+.+
T Consensus 8 v~qglhe~ikli~n 21 (23)
T PF08225_consen 8 VFQGLHEVIKLINN 21 (23)
T ss_pred HHHHHHHHHHHHhc
Confidence 68999999987764
No 49
>PF13533 Biotin_lipoyl_2: Biotin-lipoyl like
Probab=24.18 E-value=1e+02 Score=19.61 Aligned_cols=23 Identities=26% Similarity=0.241 Sum_probs=19.9
Q ss_pred EeeCCeeecCCccEEEEEeccch
Q 028745 120 AITEGSVVFPKVPLLRVEGPVAV 142 (204)
Q Consensus 120 a~~EG~lv~~~eP~i~I~Gp~~~ 142 (204)
.+.||+.|-.|+|++++..+-.+
T Consensus 17 ~V~~G~~VkkGd~L~~ld~~~~~ 39 (50)
T PF13533_consen 17 YVKEGQQVKKGDVLLVLDSPDLQ 39 (50)
T ss_pred EecCCCEEcCCCEEEEECcHHHH
Confidence 45899999999999999887665
No 50
>PF03927 NapD: NapD protein; InterPro: IPR005623 This entry represents NapD, the twin-arginine signal-peptide-binding chaperone for NapA, functioning as an assembly protein for the periplasmic nitrate reductase NapABC. The periplasmic NapABC enzyme likely functions during growth in nitrate-limited environments [].; PDB: 2JSX_A 2PQ4_A.
Probab=23.47 E-value=1.5e+02 Score=20.91 Aligned_cols=24 Identities=33% Similarity=0.598 Sum_probs=19.1
Q ss_pred CCceEEEEeeC-CeeecCCccEEEEEeccch
Q 028745 113 CSDVEVHAITE-GSVVFPKVPLLRVEGPVAV 142 (204)
Q Consensus 113 ~~~v~I~a~~E-G~lv~~~eP~i~I~Gp~~~ 142 (204)
..+++|++..+ |.+ ++.|+++-.+
T Consensus 27 ~~gvEVh~~~~~GKi------VVtiE~~~~~ 51 (79)
T PF03927_consen 27 IPGVEVHAVDEDGKI------VVTIEAESSE 51 (79)
T ss_dssp STTEEEEEEETTTEE------EEEEEESSHH
T ss_pred CCCcEEEeeCCCCeE------EEEEEeCChH
Confidence 45689988776 999 7999998653
No 51
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=20.43 E-value=54 Score=26.52 Aligned_cols=56 Identities=20% Similarity=0.199 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCCCCceEEEEEEeecCC----CCCcchHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 028745 34 QFTMAYAYWKAGKHDERAVFDLYFRKNP----FGGEYTIFAGLEECIRFIANFKLTEEEITFVR 93 (204)
Q Consensus 34 kltm~~a~~~~~~~~~~v~f~ff~R~~p----~~~~~~v~~gl~~~i~~L~~l~ft~eei~yL~ 93 (204)
++.|-|++-++. .+.+|+=|.+... .+.+++..+.|+.+|-.|-+ ++|++|++-|-
T Consensus 71 fLpm~q~vaknk---~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGe-kl~eeEVe~Ll 130 (152)
T KOG0030|consen 71 FLPMYQQVAKNK---DQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGE-KLTEEEVEELL 130 (152)
T ss_pred HHHHHHHHHhcc---ccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHh-hccHHHHHHHH
Confidence 477878876663 3688887876542 35788899999999998886 78999999874
Done!