Query 028745
Match_columns 204
No_of_seqs 104 out of 1030
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 18:09:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/028745.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2239-2242//hhsearch_pdb/028745hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hl7_A Naprtase, nicotinate ph 1.0 1 1 325.7 15.2 179 16-198 4-206 (446)
2 1ybe_A Naprtase, nicotinate ph 1.0 1 1 311.6 16.6 188 3-202 6-228 (449)
3 3os4_A Naprtase, nicotinate ph 1.0 1 1 310.1 18.5 174 19-202 3-200 (407)
4 1vlp_A Naprtase, nicotinate ph 1.0 1 1 304.3 20.5 171 17-195 11-207 (441)
5 2im5_A Nicotinate phosphoribos 1.0 1 1 293.0 20.1 166 23-202 2-192 (394)
6 1yir_A Naprtase 2, nicotinate 1.0 1 1 291.6 19.2 168 22-202 10-205 (408)
7 3dhf_A Nicotinamide phosphorib 1.0 1 1 290.6 11.6 179 19-203 4-217 (484)
8 2f7f_A Nicotinate phosphoribos 1.0 1 1 287.2 17.9 173 22-198 6-179 (494)
9 2i14_A Nicotinate-nucleotide p 1.0 1 1 203.1 10.3 137 20-191 14-150 (395)
10 2i1o_A Nicotinate phosphoribos 1.0 1 1 194.4 9.2 134 20-190 14-153 (398)
No 1
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=325.74 Aligned_cols=179 Identities=16% Similarity=0.168 Sum_probs=157.4
Q ss_pred CCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 99899998741-23413989999999998299995499999951499999605898999999999649999888999986
Q 028745 16 SVSGPTNPMVT-PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRD 94 (204)
Q Consensus 16 ~~~~~~~~i~~-~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~~~~~v~~gl~e~l~~L~~l~ft~eei~yL~~ 94 (204)
|-+|..+||+. .|+||+||+||+|+||++++ +.+|+|+||+|+.|+.++| ++||+++|++|++++||+||++||++
T Consensus 4 ~~~~~~~~iI~s~L~TDlYkltM~qa~~~~~~-~~~v~fe~f~R~~p~~~~~--~agL~~~l~~L~~l~ft~eei~yL~~ 80 (446)
T 4hl7_A 4 NPRLFSPHIIRSLLDLDAYKINMMQAIHHFYP-DVSVRYELIVRSEEDASGL--LDAIRQEIAHLGTLRFSDADIHYLTQ 80 (446)
T ss_dssp CTTTCCSCSSCSTTSSBHHHHHHHHHHHHHCT-TCEEEEEEEEESCTTTHHH--HHHHHHHHHHGGGCCCCHHHHHHHHH
T ss_pred CCCCCCCCHHCHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCCCCHHH--HHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 81346760313017878889999999998599-9869999998889971249--99999999999867999999999984
Q ss_pred HCCCCCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHH------HHHH-------
Q ss_conf 499999912888872489984189983099054299328999935503688878999898789------9998-------
Q 028745 95 SLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA------SLVT------- 161 (204)
Q Consensus 95 ~~~~~~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iIse~------~~va------- 161 (204)
..+ +|+++|++||++|++++-++++++||++++|+||+|+|+|||.++++||||||+|||++ +.+|
T Consensus 81 ~~~-~~~~~fl~yL~~frf~~~~~~av~eg~~~~~~ep~l~VeGp~~e~~L~Et~lL~iin~~~~~~~~s~ia~~~~~~~ 159 (446)
T 4hl7_A 81 HAP-HLKATFLQSLRYFHFVPQEQVEMGIVKQGGKQQLRISIRGSWRDTILYETLVMAIVSEVRSRQRWAEVPADLPLKV 159 (446)
T ss_dssp HCT-TSCHHHHHHHTTCCCCHHHHEEEEEECC----EEEEEEEEEHHHHTTHHHHHHHHHHHHHHHHHCTTSCTTHHHHH
T ss_pred CCC-CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 877-7998999999738999738999845666769988999997779985789999999989998405753037889999
Q ss_pred --HHHHHHHHHHC----CCCEEEECCCCCCCCHH---HHHHHH-HHH
Q ss_conf --79999999948----99906311688999811---689766-375
Q 028745 162 --TNAARHRFVAG----KSKMLLEFGLRRAQVAH---IIFNLL-FEL 198 (204)
Q Consensus 162 --T~a~~~~~a~~----~~~~~~eFGtRR~~s~~---a~~~~~-~~~ 198 (204)
|+++|++.+++ .+++++|||+|||||++ +++.++ +++
T Consensus 160 ~~tKa~rl~~aA~~~~~~~~~l~eFGtRR~~s~~~Q~~~v~~~raa~ 206 (446)
T 4hl7_A 160 LKTKLDQLKAEIERRGINNFSLTEMGTRRRFSSQVQRDVLACLKQEI 206 (446)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCEEECCSTTCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999986232466898578536524367678999999999996
No 2
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=1.00 E-value=1 Score=311.62 Aligned_cols=188 Identities=18% Similarity=0.180 Sum_probs=167.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC-CCCCHHHHHHHHHHHHHH
Q ss_conf 888999743248899899998741-234139899999999982999954999999514999-996058989999999996
Q 028745 3 GKANGPSENQAGRSVSGPTNPMVT-PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPF-GGEYTIFAGLEECIRFIA 80 (204)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~i~~-~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~-~~~~~v~~gl~e~l~~L~ 80 (204)
+-|..+++++++-|+.|.++||+. .|+||+||+||+|+||+++| +.+|+|+||+|+.|+ .++|++++||+++|++|+
T Consensus 6 ~~~~~~~~~~r~~~~~~~~~~ii~s~L~TD~YkltM~~~~~~~~p-~~~v~f~~~~R~~p~~~~~~~v~aGL~~~l~~l~ 84 (449)
T 1ybe_A 6 ASMTKTDIATRVHNHTWKLDPIVRSLIDTDFYKLLMLQMIWKLYP-EVDATFSLINRTKTVRLAEEIDEMELREQLDHAR 84 (449)
T ss_dssp --CHHHHHHTC-----CCCCCSCCCTTCSBHHHHHHHHHHHHHCT-TCBEEEEEEESCCSSCSTTTSCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 211023035554067766786664178899879999999998689-9869999998899766752307998999999998
Q ss_pred CCCCCHHHHHHHHHHCCCC------CCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHH
Q ss_conf 4999988899998649999------9912888872489984189983099054299328999935503688878999898
Q 028745 81 NFKLTEEEITFVRDSLPGS------CEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLI 154 (204)
Q Consensus 81 ~l~ft~eei~yL~~~~~~~------~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iI 154 (204)
+++||++|++||++ ++ + |+++|++||+++++.+ +|+++||| ||+|+|+|||.++++||||||++|
T Consensus 85 ~~~ft~eei~yL~~-~~-~~~~~~~f~~~fl~~L~~~~~~~-~i~a~~EG------ep~l~I~Gp~~~~~llET~lL~ii 155 (449)
T 1ybe_A 85 TLRLSKKENIWLAG-NT-FYGRSQIFEPEFLSWLSSYQLPE-YELFKRDG------QYELNFHGRWMDTTLWEIPALSII 155 (449)
T ss_dssp TCCCCHHHHHHHHH-SC-SSSCSCCSCHHHHHHHHTCCCCC-CEEEECSS------CEEEEECSBHHHHGGGHHHHHHHH
T ss_pred HCCCCHHHHHHHHH-CC-CCCCCCCCCHHHHHHHHHCCCCC-EEEEECCC------EEEEEEEECHHHHHHHHHHHHHHH
T ss_conf 47999999999985-66-66677777999999998579982-49993699------189999954899889999999998
Q ss_pred HHH----------------------HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHH----HHHHHHHH-HHCC
Q ss_conf 789----------------------999879999999948999063116889998116----89766375-5132
Q 028745 155 NYA----------------------SLVTTNAARHRFVAGKSKMLLEFGLRRAQVAHI----IFNLLFEL-LIFV 202 (204)
Q Consensus 155 se~----------------------~~vaT~a~~~~~a~~~~~~~~eFGtRR~~s~~a----~~~~~~~~-~~f~ 202 (204)
|++ +.++|+++++ .++ .+++++|||+||+||+++ +-++++|+ .+|.
T Consensus 156 ~~~~~t~a~~t~~~~~~s~~~~~~~~~iatka~r~-~~a-~~~~l~dFG~RR~~s~~~~~~~~r~~aa~l~~gf~ 228 (449)
T 1ybe_A 156 NELRSRSAMRSLGYFTLDVLYARAKAKMWEKVERL-REL-PGLRISDFGTRRRHSFLWQRWCVEALKEGIGPAFT 228 (449)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHH-TTC-TTCCEEECCTTTCSCHHHHHHHHHHHHHHHGGGEE
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HCC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCE
T ss_conf 50211245444332210156789999999999998-616-99869843776667388999999999988568926
No 3
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=1.00 E-value=1 Score=310.14 Aligned_cols=174 Identities=20% Similarity=0.336 Sum_probs=151.0
Q ss_pred CCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
Q ss_conf 99998741234-13989999999998299995499999951499999605898999999999649999888999986499
Q 028745 19 GPTNPMVTPLL-NDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLP 97 (204)
Q Consensus 19 ~~~~~i~~~Ll-TD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~~~~~v~~gl~e~l~~L~~l~ft~eei~yL~~~~~ 97 (204)
+..+||+.+++ ||+||+||+|++|+++| +.+|+|+||+|+.|+.++ +++||+++|++|++++||++|++||++ |+
T Consensus 3 ~~~~~ii~s~L~TDlY~ltM~~a~~~~~~-~~~v~fe~f~R~~~~~~~--~~agl~~~l~~l~~l~ft~~ei~yL~~-~~ 78 (407)
T 3os4_A 3 QDASPILTSLLDTDAYKLHMQQAVFHHYR-HITVAAEFRCRSDELLGV--YADEIRHQVTLMGQLALTSDEFIYLSS-LP 78 (407)
T ss_dssp CTTSCSCCCTTSSBHHHHHHHHHHHHHCT-TCEEEEEEEECSSCCCGG--GHHHHHHHHHHHTTCCCCHHHHHHHHT-SS
T ss_pred CCCCCHHCCCHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCCCHHH--HHHHHHHHHHHHHHCCCCHHHHHHHHH-CC
T ss_conf 76543201222015679999999998699-975999999767994256--999999999999728999999999984-89
Q ss_pred CCCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHH---------------HHHHH
Q ss_conf 999912888872489984189983099054299328999935503688878999898789---------------99987
Q 028745 98 GSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVTT 162 (204)
Q Consensus 98 ~~~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iIse~---------------~~vaT 162 (204)
+|+++|++||++||+.+ ++++++| +|+||+|+|+|||.++++||||||+||||+ +.+||
T Consensus 79 -~~~~~fl~yL~~frf~~-~~~~~~e----~~~ep~l~I~Gp~~e~~l~Et~lL~iin~~~~~~~~~~~~~~~~~s~iat 152 (407)
T 3os4_A 79 -FFQDDYLHWLRDFRFKP-EQVSVAV----HDGKLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQAVQQLRT 152 (407)
T ss_dssp -SCCHHHHHHHHHCCCCG-GGEEEEE----ETTEEEEEEEEEHHHHTTSHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHCCCCC-EEEEEEC----CCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf -99989999997589886-5999855----89927999997799999999999999999998603665357899999999
Q ss_pred HHHHHHHHHC----CCCEEEECCCCCCCCHH---HHHHHH-HHHHHCC
Q ss_conf 9999999948----99906311688999811---689766-3755132
Q 028745 163 NAARHRFVAG----KSKMLLEFGLRRAQVAH---IIFNLL-FELLIFV 202 (204)
Q Consensus 163 ~a~~~~~a~~----~~~~~~eFGtRR~~s~~---a~~~~~-~~~~~f~ 202 (204)
+++|++.+++ ++++++|||+|||||++ +.+++. +|+-.|.
T Consensus 153 Ka~r~~~aa~~~~~~~~~~~eFGtRR~~s~~~q~~v~~~~~a~iggf~ 200 (407)
T 3os4_A 153 KLEQFNALSADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLV 200 (407)
T ss_dssp HHHHHHHHTTTSCCTTCCEEECCSTTCSCHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 999999863101469985885365454677889999999999857966
No 4
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=1.00 E-value=1 Score=304.28 Aligned_cols=171 Identities=19% Similarity=0.267 Sum_probs=149.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC--HHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 98999987412341398999999999829999549999995149999960--5898999999999649999888999986
Q 028745 17 VSGPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEY--TIFAGLEECIRFIANFKLTEEEITFVRD 94 (204)
Q Consensus 17 ~~~~~~~i~~~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~~~~--~v~~gl~e~l~~L~~l~ft~eei~yL~~ 94 (204)
|.|....|++.|+||+||+||+|+||+++|+ .+|+|+||+|+ |.. +| .+++||+++|++|++++||++|++||++
T Consensus 11 ~~~~~~ii~s~L~TD~YkltM~~a~~~~~~~-~~~~f~~~~R~-p~~-~~~~~v~~GL~~~l~~l~~l~ft~eei~yL~~ 87 (441)
T 1vlp_A 11 HHMSEPVIKSLLDTDMYKITMHAAVFTNFPD-VTVTYKYTNRS-SQL-TFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQ 87 (441)
T ss_dssp CCCCCCSCCCTTSSBHHHHHHHHHHHHHCTT-CEEEEEEEESC-TTC-CBCHHHHHHHHHHHHHGGGCCCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEEEEC-CCC-CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 1244201120464687799999999984899-77999999828-986-61399999999999999837989999999996
Q ss_pred HCCCCCCHHHHHHH--HCCCCCC---EEEEEEEC-CEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHH-----------
Q ss_conf 49999991288887--2489984---18998309-9054299328999935503688878999898789-----------
Q 028745 95 SLPGSCEDGFFDYL--RGINCSD---VEVHAITE-GSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA----------- 157 (204)
Q Consensus 95 ~~~~~~~~~f~~~L--~~~~~~~---v~I~a~~E-G~lv~~~eP~i~I~Gp~~~~~llEt~lL~iIse~----------- 157 (204)
.++ +|+++|++|| ++|++.+ |+|+++|| |++++ ++|+|+|+|||.++++||||||++|||+
T Consensus 88 ~~~-~f~~~fl~~L~~~~f~~~~~~~v~I~a~~EgGt~v~-~ep~l~IeGp~~~~~llET~lL~ii~e~~~~~v~t~~~~ 165 (441)
T 1vlp_A 88 EIP-YLPSAYIKYISSSNYKLHPEEQISFTSEEIEGKPTH-YKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDY 165 (441)
T ss_dssp HCT-TSCHHHHHHHHSTTCCCCHHHHEEEEEEEETTEEEE-EEEEEEEEEEHHHHTTSHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HCC-CCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEC-CEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 268-899999999985246768984279999547885379-988999997489989999999999988760011110158
Q ss_pred ----HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHH---HHHHH
Q ss_conf ----999879999999948999063116889998116---89766
Q 028745 158 ----SLVTTNAARHRFVAGKSKMLLEFGLRRAQVAHI---IFNLL 195 (204)
Q Consensus 158 ----~~vaT~a~~~~~a~~~~~~~~eFGtRR~~s~~a---~~~~~ 195 (204)
+.++|++++++ + .+++++|||+||+||+++ ++.++
T Consensus 166 ~~~~~~iatka~r~~--a-~~~~l~dFG~RR~~~~~~q~~a~~~~ 207 (441)
T 1vlp_A 166 ENQLEQAEKKAETLF--D-NGIRFSEFGTRRRRSLKAQDLIMQGI 207 (441)
T ss_dssp TTHHHHHHHHHHHHH--H-TTCCEEECCSTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--C-CCCEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 999999999999740--6-99869864898868738999999999
No 5
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=1.00 E-value=1 Score=293.00 Aligned_cols=166 Identities=24% Similarity=0.300 Sum_probs=144.1
Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC-H-HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 874-12341398999999999829999549999995149999960-5-89899999999964999988899998649999
Q 028745 23 PMV-TPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEY-T-IFAGLEECIRFIANFKLTEEEITFVRDSLPGS 99 (204)
Q Consensus 23 ~i~-~~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~~~~-~-v~~gl~e~l~~L~~l~ft~eei~yL~~~~~~~ 99 (204)
||+ +.|+||+||+||+|+||+++| +++|+|+||+|+ |. +| . +++||+++|++|++++||++|++||++.++ +
T Consensus 2 ~ii~~~L~TD~Ykltm~~~~~~~~~-~~~v~f~~~~R~-~~--~~~~~v~~gL~~~l~~l~~~~ft~~ei~yL~~~~~-~ 76 (394)
T 2im5_A 2 GIIRSILDTDLYKFTTGYAYAKLFP-RAYGEFRFIDRN-RQ--GFTEEFAELVRGEIRAMAALSLTRDEKEFLQRELP-Y 76 (394)
T ss_dssp -CCCCTTCSBHHHHHHHHHHHHHCT-TCEEEEEEEETT-CC--CCCHHHHHHHHHHHHHGGGCCCCHHHHHHHHHHCT-T
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECC-CC--CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC-C
T ss_conf 3225568778519999999999589-987999999679-98--60569999999999999818989999999997278-8
Q ss_pred CCHHHHHHHHCCCC--CCEEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHH---------------HHHHH
Q ss_conf 99128888724899--84189983099054299328999935503688878999898789---------------99987
Q 028745 100 CEDGFFDYLRGINC--SDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVTT 162 (204)
Q Consensus 100 ~~~~f~~~L~~~~~--~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iIse~---------------~~vaT 162 (204)
|+++|++||++|++ .+|+|+++|||+ |+|+|+|||.++++||||||++|||+ +.++|
T Consensus 77 f~~~fl~~L~~~r~~~~~v~I~a~~EGe------p~l~I~Gp~~~~~l~Et~lL~ii~e~~~~~Vat~~~~~~~~~~iat 150 (394)
T 2im5_A 77 LPPIYIDFLDGFRFDPEEVTVSIDAQGH------LDIRAQGLLYRVTLWETPILAVISELYYRFIGAEPDWKQVEEVTRS 150 (394)
T ss_dssp SCHHHHHHHHHCCCCGGGEEEEECTTSC------EEEEEEEEHHHHGGGHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCEEEEEECCCCC------EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 8999999998547798148999868995------8999995489999999999999987762022200158999999999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCHHHH----HHHHHHHH-HCC
Q ss_conf 99999999489990631168899981168----97663755-132
Q 028745 163 NAARHRFVAGKSKMLLEFGLRRAQVAHII----FNLLFELL-IFV 202 (204)
Q Consensus 163 ~a~~~~~a~~~~~~~~eFGtRR~~s~~a~----~~~~~~~~-~f~ 202 (204)
+++++ ++ .+++++|||+||+||++++ .++.+|++ .|.
T Consensus 151 ka~r~--a~-~~~~l~dFG~RR~~~~~~~~~~~~~~ra~~~~gf~ 192 (394)
T 2im5_A 151 KGELM--RE-HRATFSIFGMRRRFSLEVEDRVTDILKQYAGESLF 192 (394)
T ss_dssp HHHHH--HH-TTCCEEECCSTTCSCHHHHHHHHHHHHHHSGGGEE
T ss_pred HHHHH--HC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEE
T ss_conf 99987--18-99889975896546688999999999998638805
No 6
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=1.00 E-value=1 Score=291.61 Aligned_cols=168 Identities=21% Similarity=0.348 Sum_probs=145.4
Q ss_pred CCCCC-HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 98741-2341398999999999829999549999995149999-960589899999999964999988899998649999
Q 028745 22 NPMVT-PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFG-GEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGS 99 (204)
Q Consensus 22 ~~i~~-~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~-~~~~v~~gl~e~l~~L~~l~ft~eei~yL~~~~~~~ 99 (204)
+||+. .|+||+||+||+|+||+++| +++|+|+||+|+ |+. +++ ++||+++|++|++++||++|++||++ ++ +
T Consensus 10 ~~iI~~~L~TD~YkltM~~~~~~~~~-~~~~~f~~~~R~-~~~~~~~--~~GL~~~l~~l~~~~ft~~ei~yL~~-~~-~ 83 (408)
T 1yir_A 10 ERIVQNLLDTDFYKLTMMQAVLHNYP-NAEVEWEFRCRN-QEDLRLY--LPAIREQLEYLAGLAISDEQLAFLER-IP-F 83 (408)
T ss_dssp SCSSCSTTSSBHHHHHHHHHHHHHCT-TCEEEEEEEETT-CCCCGGG--HHHHHHHHHHHHHCCCCHHHHHHHHT-ST-T
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECC-CCCCCCH--HHHHHHHHHHHHHCCCCHHHHHHHHH-CC-C
T ss_conf 56777678899879999999998589-987999999668-9873018--99999999999847999999999986-79-9
Q ss_pred CCHHHHHHHHCCCCC--CEEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHH---------------HHHHH
Q ss_conf 991288887248998--4189983099054299328999935503688878999898789---------------99987
Q 028745 100 CEDGFFDYLRGINCS--DVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYA---------------SLVTT 162 (204)
Q Consensus 100 ~~~~f~~~L~~~~~~--~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iIse~---------------~~vaT 162 (204)
|+++|++||+++++. +|+|++ |||++ +|+|+|||.++++|||+||++||++ +.++|
T Consensus 84 f~~~fl~~L~~~rf~~~~v~I~a-~EG~~------~l~i~Gp~~~~~llEt~lL~ii~~~~~~~~~~~~~~~~~~~~iat 156 (408)
T 1yir_A 84 LAPDFIRFLGLFRFNPRYVQTGI-ENDEF------FLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQE 156 (408)
T ss_dssp SCHHHHHHHHHCCCCGGGEEEEE-ETTEE------EEEEEEEHHHHGGGHHHHHHHHHHHHHHHHCTTCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCEEEEEC-CCCCE------EEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 89999999985588994489984-89958------999983389989999999999976675226776346899999999
Q ss_pred HHHHHHHHHC----CCCEEEECCCCCCCCHHH----HHHHHHHH-HHCC
Q ss_conf 9999999948----999063116889998116----89766375-5132
Q 028745 163 NAARHRFVAG----KSKMLLEFGLRRAQVAHI----IFNLLFEL-LIFV 202 (204)
Q Consensus 163 ~a~~~~~a~~----~~~~~~eFGtRR~~s~~a----~~~~~~~~-~~f~ 202 (204)
++++++++++ .+++++|||+||+||+++ .-++++|+ -.|.
T Consensus 157 K~~rl~~aa~~~~~~~~~l~dFG~RR~~~~~~~~~~~~~~~a~l~~gf~ 205 (408)
T 1yir_A 157 KFDWLRREASAEELAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFV 205 (408)
T ss_dssp HHHHHHTTSCHHHHTTCEEEECCSTTCSCHHHHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCE
T ss_conf 9999998613324689858971576566278899999999998558936
No 7
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=1.00 E-value=1 Score=290.61 Aligned_cols=179 Identities=21% Similarity=0.278 Sum_probs=155.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC---------CCCCCHHHHHHHHHH-HHHHCCCCCHHH
Q ss_conf 9999874123413989999999998299995499999951499---------999605898999999-999649999888
Q 028745 19 GPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNP---------FGGEYTIFAGLEECI-RFIANFKLTEEE 88 (204)
Q Consensus 19 ~~~~~i~~~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~---------~~~~~~v~~gl~e~l-~~L~~l~ft~ee 88 (204)
|.....+..|+||+||+||.++| |.++.++|++|.|+.+ +.++++|++||+++| ++|++++||++|
T Consensus 4 m~~~~~n~~L~tD~YK~th~~~Y----p~~~~~v~s~f~~R~~~~~~~~~~~~~~~~~v~~GL~~~l~~~l~~~~ft~~d 79 (484)
T 3dhf_A 4 AAEAEFNILLATDSYKVTHYKQY----PPNTSKVYSYFECREKKTENSKLRKVKYEETVFYGLQYILNKYLKGKVVTKEK 79 (484)
T ss_dssp -----CCGGGSSBGGGGGGGGTS----CTTEEEEEEEEEECC------------CCEEECCCHHHHHHHHTSSCCCCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHC----CCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHH
T ss_conf 45464562255676799999866----48982999999976897665432224678253077999999999867999999
Q ss_pred HHHHHHHCC-----CCCCHHHHHHHHC---CCCCCEEEEEEECCEEECCCCCEEEEEECCC----HHHHHHHHHHHHHHH
Q ss_conf 999986499-----9999128888724---8998418998309905429932899993550----368887899989878
Q 028745 89 ITFVRDSLP-----GSCEDGFFDYLRG---INCSDVEVHAITEGSVVFPKVPLLRVEGPVA----VVQLLETPFVNLINY 156 (204)
Q Consensus 89 i~yL~~~~~-----~~~~~~f~~~L~~---~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~----~~~llEt~lL~iIse 156 (204)
++||++.|+ .+|+++|++||++ +++ +++|+|+|||++|||++|+++|+||.. ++++|||+||+ ||+
T Consensus 80 i~~l~~~~~~~~g~~~f~~~f~~~L~~~~~~~~-~~~I~A~pEGt~v~~~~Pll~Ve~~~~~f~w~~~llET~Ll~-l~~ 157 (484)
T 3dhf_A 80 IQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHL-PIEIKAVPEGFVIPRGNVLFTVENTDPECYWLTNWIETILVQ-SWY 157 (484)
T ss_dssp HHHHHHHHHHHHTSCCCCHHHHHHHHHHHTTCC-CEEEEECCTTCEEETTSCCEEEEESSGGGTTHHHHTHHHHHT-THH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC-CEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-HHH
T ss_conf 999997654303667689899999974137877-338999789845369982799998374422343667999998-878
Q ss_pred HHHHHHHHHHHHHHH------------CCCCEEEECCCCCCCCHHH-HHHHHHHHHHCCC
Q ss_conf 999987999999994------------8999063116889998116-8976637551324
Q 028745 157 ASLVTTNAARHRFVA------------GKSKMLLEFGLRRAQVAHI-IFNLLFELLIFVC 203 (204)
Q Consensus 157 ~~~vaT~a~~~~~a~------------~~~~~~~eFGtRR~~s~~a-~~~~~~~~~~f~~ 203 (204)
++++||+++|+++++ +.+++++|||+||+||+++ .+++++|+.+|.-
T Consensus 158 ~s~vAT~A~r~~~~~~~~~~~t~~~~~~~~~~l~dFG~Rr~~~~~~a~~~~aa~i~gf~G 217 (484)
T 3dhf_A 158 PITVATNSREQKKILAKYLLETSGNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKG 217 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCTTGGGSEEECCTTTSSCHHHHHHHHHHHTTTCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 888888999999999998875023213689868755887666618999999788618821
No 8
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=1.00 E-value=1 Score=287.22 Aligned_cols=173 Identities=38% Similarity=0.677 Sum_probs=157.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 98741234139899999999982999954999999514999996058989999999996499998889999864999999
Q 028745 22 NPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCE 101 (204)
Q Consensus 22 ~~i~~~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~~~~~v~~gl~e~l~~L~~l~ft~eei~yL~~~~~~~~~ 101 (204)
++.++.|+||+||+||+|+||+++|++.+++|+||+|+.|+.++|.+++|+++++++|++++||++|++||++. + +|+
T Consensus 6 ~~~~~~L~TD~Ykltm~~~~~~~g~~~~~~~f~~~~R~~p~~~~~~v~aGl~~~l~~l~~l~ft~~ei~yl~~~-~-~f~ 83 (494)
T 2f7f_A 6 ADDSLTLHTDMYQINMMQTYWELGRADLHAVFECYFREMPFNHGYAIFAGLERLVNYLENLTFTESDIAYLREV-E-EYP 83 (494)
T ss_dssp CCCCSTTCSCHHHHHHHHHHHHTTCTTCEEEEEEECSSCGGGCSCEECCCHHHHHHHHHTCCCCHHHHHHHHHT-S-CCC
T ss_pred CCCCCCHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHC-C-CCC
T ss_conf 67882243144389999999983999977999999877987776475175999999998089899999999856-9-999
Q ss_pred HHHHHHHHCCCCCCEEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 12888872489984189983099054299328999935503688878999898789999879999999948999063116
Q 028745 102 DGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLEFG 181 (204)
Q Consensus 102 ~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iIse~~~vaT~a~~~~~a~~~~~~~~eFG 181 (204)
++|++||+++++. ++|++++||+.|+|++|+++|+|||.+++++|+++|++||+.+.+||++++++.+++ +.+++|||
T Consensus 84 ~~fl~~L~~~~f~-~~i~av~EG~~v~~g~pll~v~Gp~~~~~~~Et~lLnil~~~S~IAT~a~r~v~aa~-~~~v~~fg 161 (494)
T 2f7f_A 84 EDFLTYLANFEFK-CTVRSALEGDLVFNNEPLIQIEGPLAQCQLVETALLNMVNFQTLIATKAARIKSVIG-DDPLLEFG 161 (494)
T ss_dssp HHHHHHHHTCCCC-CEEEECCTTCEECTTSCSEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSCEEECC
T ss_pred HHHHHHHHHCCCC-CEEEEECCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEC
T ss_conf 8999999748998-369980689763599779999977999999999999999999899999999999728-99569802
Q ss_pred CCCCCCHHHHHHH-HHHH
Q ss_conf 8899981168976-6375
Q 028745 182 LRRAQVAHIIFNL-LFEL 198 (204)
Q Consensus 182 tRR~~s~~a~~~~-~~~~ 198 (204)
|||++|.+++..+ .+++
T Consensus 162 tRr~~~~~~a~~~~raa~ 179 (494)
T 2f7f_A 162 TRRAQELDAAIWGTRAAY 179 (494)
T ss_dssp GGGSSSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 678786789999868998
No 9
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=1.00 E-value=1 Score=203.07 Aligned_cols=137 Identities=23% Similarity=0.357 Sum_probs=123.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 99987412341398999999999829999549999995149999960589899999999964999988899998649999
Q 028745 20 PTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGS 99 (204)
Q Consensus 20 ~~~~i~~~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~~~~~v~~gl~e~l~~L~~l~ft~eei~yL~~~~~~~ 99 (204)
+.+.|...|+||+|+++|+|++|++++ +.+++|+|++|+.|+.+++.|++|+++++++++++
T Consensus 14 ~~~~I~~~L~tD~Y~~tm~~~~~~~g~-~~~~~~~~~~R~~p~~~~~~v~aGl~~~~~~l~~~----------------- 75 (395)
T 2i14_A 14 NEDEIKAGKTTDVYFLRTKKILEVKNI-RKKVLADVTTTSLPNNWRWGVLVGVEEVAKLLEGI----------------- 75 (395)
T ss_dssp CHHHHHHTTTSBHHHHHHHHHHHHTTC-CCEEEEEEECSCCGGGCSCEECCCHHHHHHHHTTS-----------------
T ss_pred CHHHHHHHHHHHCHHHHHHHHHHHHCC-CCEEEEEEEECCCCCCCCCEEECCHHHHHHHHHCC-----------------
T ss_conf 999999999866519999999998589-97599999983798788865766699999998479-----------------
Q ss_pred CCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99128888724899841899830990542993289999355036888789998987899998799999999489990631
Q 028745 100 CEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGKSKMLLE 179 (204)
Q Consensus 100 ~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~eP~i~I~Gp~~~~~llEt~lL~iIse~~~vaT~a~~~~~a~~~~~~~~e 179 (204)
+++|++++||+.|+|++|+++|+|||.+++++|+++|++||++|.+||++++++.+++ +.++.+
T Consensus 76 ---------------~~~i~~~~eG~~v~~ge~ll~v~G~~~~~~~~E~~~Lnil~~~SgIAT~a~r~v~aa~-~~~~~~ 139 (395)
T 2i14_A 76 ---------------PVNVYAMPEGTIFHPYEPVLQIEGDYADFGIYETALLGMLSQASGIATAALRIKIAAK-FKPVYS 139 (395)
T ss_dssp ---------------SEEEEECCTTCEECTTSCSEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTT-TCCEEE
T ss_pred ---------------CCEEEEECCCCEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEE
T ss_conf ---------------9279997689881499779999960899999999999999998999999999999707-998799
Q ss_pred CCCCCCCCHHHH
Q ss_conf 168899981168
Q 028745 180 FGLRRAQVAHII 191 (204)
Q Consensus 180 FGtRR~~s~~a~ 191 (204)
|||||++ +++.
T Consensus 140 fgtRrt~-p~~~ 150 (395)
T 2i14_A 140 FGIRHMH-PAIA 150 (395)
T ss_dssp CGGGGSC-GGGH
T ss_pred ECCCCCC-HHHH
T ss_conf 7288887-8899
No 10
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=1.00 E-value=1 Score=194.36 Aligned_cols=134 Identities=28% Similarity=0.473 Sum_probs=119.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf 99987412341398999999999829999549999995149999960589899999999964999988899998649999
Q 028745 20 PTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGS 99 (204)
Q Consensus 20 ~~~~i~~~LlTD~Yk~tm~~~~~~~~~~~~~v~y~f~~R~~~~~~~~~v~~gl~e~l~~L~~l~ft~eei~yL~~~~~~~ 99 (204)
+.+.|...|+||+|+++|+|+++++++ +.+++|+|++|+.|+ ++.|++|+++++++++++
T Consensus 14 ~~~~I~~~L~tD~Y~~tm~~~~~~~~~-~~~~~~~~~~R~~p~--~~~v~aGl~~~~~~l~~~----------------- 73 (398)
T 2i1o_A 14 SDEDIKKGLASDVYFERTISAIGDKCN-DLRVAMEATVSGPLD--TWINFTGLDEVLKLLEGL----------------- 73 (398)
T ss_dssp CHHHHHHTCSSCTHHHHHHHHHGGGGG-GCEEEEEEEECSCCS--SCEECCCHHHHHHHHTTS-----------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCCC--CCEEECCHHHHHHHHHHC-----------------
T ss_conf 999999999736359999999997489-975999999877997--265876799999998148-----------------
Q ss_pred CCHHHHHHHHCCCCCCEEEEEEECCEEECCCC------CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99128888724899841899830990542993------289999355036888789998987899998799999999489
Q 028745 100 CEDGFFDYLRGINCSDVEVHAITEGSVVFPKV------PLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVAGK 173 (204)
Q Consensus 100 ~~~~f~~~L~~~~~~~v~I~a~~EG~lv~~~e------P~i~I~Gp~~~~~llEt~lL~iIse~~~vaT~a~~~~~a~~~ 173 (204)
+++|++++||+.|+|++ |+++|+|||.+++++|+++|++||++|.+||++++++.+++
T Consensus 74 ---------------~~~i~~~~eG~~v~~g~~~g~~~~ll~v~G~~~~~~~~E~~~Lnil~~~SgIAT~a~r~v~aa~- 137 (398)
T 2i1o_A 74 ---------------DVDLYAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQASGISTKASKVRLAAG- 137 (398)
T ss_dssp ---------------SCEEEECCTTCEECSBCTTSCBCEEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ---------------CEEEEEECCCCEECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf ---------------8689996789887899856666469999973999999999999999898999999999998717-
Q ss_pred CCEEEECCCCCCCCHHH
Q ss_conf 99063116889998116
Q 028745 174 SKMLLEFGLRRAQVAHI 190 (204)
Q Consensus 174 ~~~~~eFGtRR~~s~~a 190 (204)
+.++.+|||||++ +++
T Consensus 138 ~~~~~~fgtRrt~-p~~ 153 (398)
T 2i1o_A 138 DSPFFSFGIRRMH-PAI 153 (398)
T ss_dssp TSCEEECCGGGSC-GGG
T ss_pred CCCEEEECCCCCC-HHH
T ss_conf 9988996178887-888
Done!