BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028749
MNSPAPCSRSWSISEDSLRRYVHFAKISKRRSGSLHTFRSRWLLKSVSPQQFITVANAID
AAKQWDSDLVEAKYIKDLEDNLSIIRLRFGEHSKPLFRNREFIVYERRETMEDGTLVVAV
ASLPKEIAAGLHPKQNNSIRGLLLQSGWVVEKLEDDSCMVTYVVQLDPAGWVPKCFVNRL
NTKLVMIIENLRKLAQACPTNKDT

High Scoring Gene Products

Symbol, full name Information P value
AT5G49800 protein from Arabidopsis thaliana 6.5e-81
zgc:77147 gene_product from Danio rerio 1.8e-11
STARD10
PCTP-like protein
protein from Homo sapiens 1.2e-09
Stard10
START domain containing 10
protein from Mus musculus 1.2e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028749
        (204 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155461 - symbol:AT5G49800 "AT5G49800" species...   725  6.5e-81   2
ZFIN|ZDB-GENE-040426-1797 - symbol:zgc:77147 "zgc:77147" ...   159  1.8e-11   1
UNIPROTKB|Q9Y365 - symbol:STARD10 "PCTP-like protein" spe...   148  1.2e-09   1
MGI|MGI:1860093 - symbol:Stard10 "START domain containing...   148  1.2e-09   1


>TAIR|locus:2155461 [details] [associations]
            symbol:AT5G49800 "AT5G49800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] INTERPRO:IPR002913 EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:3.30.530.20 InterPro:IPR023393
            Pfam:PF01852 PROSITE:PS50848 EMBL:BT020476 IPI:IPI00533024
            RefSeq:NP_199791.2 UniGene:At.29767 ProteinModelPortal:Q5HZ48
            EnsemblPlants:AT5G49800.1 GeneID:835043 KEGG:ath:AT5G49800
            TAIR:At5g49800 eggNOG:NOG258951 HOGENOM:HOG000243738
            InParanoid:Q5HZ48 OMA:ASESCIQ PhylomeDB:Q5HZ48
            ProtClustDB:CLSN2680490 Genevestigator:Q5HZ48 Uniprot:Q5HZ48
        Length = 242

 Score = 725 (260.3 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
 Identities = 139/175 (79%), Positives = 161/175 (92%)

Query:    26 KISKRRSGSLHTFRSRWLLKSVSPQQFITVANAIDAAKQWDSDLVEAKYIKDLEDNLSII 85
             +ISKR SGSLH FRSR +L SVSP+QFITVANAIDAAKQW+ DLVEA +I+D+++NLS+I
Sbjct:    60 EISKRDSGSLHAFRSRRILTSVSPEQFITVANAIDAAKQWEGDLVEATHIRDIDENLSVI 119

Query:    86 RLRFGEHSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHP---KQNNSIRGL 142
             RLRFGE+SKPLFRNREFI+YERRETM+DGTLVVAVASLPKE+A GL P   K+NN IRG 
Sbjct:   120 RLRFGENSKPLFRNREFIIYERRETMQDGTLVVAVASLPKEMAEGLEPTEKKKNNYIRGF 179

Query:   143 LLQSGWVVEKLEDDSCMVTYVVQLDPAGWVPKCFVNRLNTKLVMIIENLRKLAQA 197
             L++SGWV+EKLED SCM+TYVVQLDPAGW+PKCFVNRLNTKLVMII+NLRK+AQA
Sbjct:   180 LVESGWVLEKLEDTSCMITYVVQLDPAGWLPKCFVNRLNTKLVMIIDNLRKVAQA 234

 Score = 106 (42.4 bits), Expect = 6.5e-81, Sum P(2) = 6.5e-81
 Identities = 20/28 (71%), Positives = 22/28 (78%)

Query:     1 MNSPAPCSRSWSISEDSLRRYVHFAKIS 28
             MN P P SRSWS+SE+SLRRYV FA  S
Sbjct:     1 MNGPVPSSRSWSVSEESLRRYVRFASES 28


>ZFIN|ZDB-GENE-040426-1797 [details] [associations]
            symbol:zgc:77147 "zgc:77147" species:7955 "Danio
            rerio" [GO:0005575 "cellular_component" evidence=ND]
            INTERPRO:IPR002913 ZFIN:ZDB-GENE-040426-1797 Gene3D:3.30.530.20
            InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
            eggNOG:NOG292439 HOGENOM:HOG000019919 HOVERGEN:HBG031807
            OMA:TESREER OrthoDB:EOG4001K5 EMBL:BC065677 IPI:IPI00511899
            RefSeq:NP_991209.1 UniGene:Dr.152439 UniGene:Dr.82524
            ProteinModelPortal:Q6P0C0 PRIDE:Q6P0C0 GeneID:402943
            KEGG:dre:402943 NextBio:20816754 Bgee:Q6P0C0 Uniprot:Q6P0C0
        Length = 274

 Score = 159 (61.0 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 41/188 (21%), Positives = 95/188 (50%)

Query:    11 WSISEDSLRRYVHFAKISKRRSGSLHTFRSRWLLKSVSPQQFITVANAIDAAKQWDSDLV 70
             W+++ +     V    + + +S  LH  + R   K +  +    V + I+  ++WD++++
Sbjct:    31 WTVTHNKSNICVWIQLLEEDKS--LHKIKCRMTCKDIPAETMYDVLHDIEYRRKWDANVI 88

Query:    71 EAKYIKDLEDNLSIIRLRFGEHSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAG 130
             E   I  L  N  +    + +  KPL +NR+ I       M +  +++  +     +   
Sbjct:    89 ETFDIGKLTVNADVGYYSW-KCPKPL-KNRDVITLRSWLPMGNDYIIMNYS-----VKHS 141

Query:   131 LHPKQNNSIRGLLLQSGWVVEKLEDDSCMVTYVVQLDPAGWVPKCFVNRLNTKLVMIIEN 190
              +P + + +R + +Q+G+++++    SC +TY+ Q+DP G +PK  VN+ +  L    + 
Sbjct:   142 KYPPKKDLVRAVSIQTGYLIQRTGPSSCTLTYLAQVDPKGSLPKWVVNKSSQLLAP--KA 199

Query:   191 LRKLAQAC 198
             ++++++AC
Sbjct:   200 MKRISKAC 207


>UNIPROTKB|Q9Y365 [details] [associations]
            symbol:STARD10 "PCTP-like protein" species:9606 "Homo
            sapiens" [GO:0006869 "lipid transport" evidence=IEA] [GO:0008289
            "lipid binding" evidence=IEA] [GO:0042995 "cell projection"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] INTERPRO:IPR002913 GO:GO:0005737
            GO:GO:0019861 GO:GO:0016020 GO:GO:0006869 GO:GO:0008289
            Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
            PROSITE:PS50848 GermOnline:ENSG00000186635 EMBL:AF151810
            EMBL:BC007919 EMBL:BC014033 EMBL:AF039696 IPI:IPI00186008
            RefSeq:NP_006636.2 UniGene:Hs.188606 ProteinModelPortal:Q9Y365
            SMR:Q9Y365 STRING:Q9Y365 PhosphoSite:Q9Y365 DMDM:25090873
            PaxDb:Q9Y365 PRIDE:Q9Y365 DNASU:10809 Ensembl:ENST00000334805
            Ensembl:ENST00000543304 GeneID:10809 KEGG:hsa:10809 UCSC:uc001osy.3
            CTD:10809 GeneCards:GC11M072465 HGNC:HGNC:10666 HPA:HPA026661
            neXtProt:NX_Q9Y365 PharmGKB:PA35596 eggNOG:NOG292439
            HOGENOM:HOG000019919 HOVERGEN:HBG031807 InParanoid:Q9Y365
            OMA:TESREER OrthoDB:EOG4001K5 GenomeRNAi:10809 NextBio:41063
            ArrayExpress:Q9Y365 Bgee:Q9Y365 CleanEx:HS_STARD10
            Genevestigator:Q9Y365 Uniprot:Q9Y365
        Length = 291

 Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 43/166 (25%), Positives = 83/166 (50%)

Query:    34 SLHTFRSRWLLKSVSPQQFITVANAIDAAKQWDSDLVEAKYIKDLEDNLSIIRLRFGEHS 93
             +LH  + R     V  +    V + I+  K+WDS+++E   I  L  N  +    +    
Sbjct:    64 TLHKIKCRMECCDVPAETLYDVLHDIEYRKKWDSNVIETFDIARLTVNADVGYYSW-RCP 122

Query:    94 KPLFRNREFIVYERRETMEDGTLVVAVA-SLPKEIAAGLHPKQNNSIRGLLLQSGWVVEK 152
             KPL +NR+ I       M    +++  +   PK      +P + + +R + +Q+G++++ 
Sbjct:   123 KPL-KNRDVITLRSWLPMGADYIIMNYSVKHPK------YPPRKDLVRAVSIQTGYLIQS 175

Query:   153 LEDDSCMVTYVVQLDPAGWVPKCFVNRLNTKLVMIIENLRKLAQAC 198
                 SC++TY+ Q+DP G +PK  VN+ +  L    + ++K+ +AC
Sbjct:   176 TGPKSCVITYLAQVDPKGSLPKWVVNKSSQFLAP--KAMKKMYKAC 219


>MGI|MGI:1860093 [details] [associations]
            symbol:Stard10 "START domain containing 10" species:10090
            "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
            "cilium" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
            [GO:0006869 "lipid transport" evidence=IEA] [GO:0008289 "lipid
            binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0042995 "cell projection" evidence=IEA] MGI:MGI:1860093
            INTERPRO:IPR002913 GO:GO:0005737 GO:GO:0019861 GO:GO:0016020
            GO:GO:0006869 GO:GO:0005929 GO:GO:0008289 Gene3D:3.30.530.20
            InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
            CTD:10809 eggNOG:NOG292439 HOVERGEN:HBG031807 OrthoDB:EOG4001K5
            EMBL:AB031550 IPI:IPI00125515 RefSeq:NP_064374.1 UniGene:Mm.28896
            ProteinModelPortal:Q9JMD3 SMR:Q9JMD3 PhosphoSite:Q9JMD3
            PaxDb:Q9JMD3 PRIDE:Q9JMD3 Ensembl:ENSMUST00000032927
            Ensembl:ENSMUST00000164479 GeneID:56018 KEGG:mmu:56018
            GeneTree:ENSGT00510000047611 InParanoid:Q9JMD3 ChiTaRS:STARD10
            NextBio:311762 Bgee:Q9JMD3 CleanEx:MM_STARD10 Genevestigator:Q9JMD3
            GermOnline:ENSMUSG00000030688 Uniprot:Q9JMD3
        Length = 291

 Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 43/166 (25%), Positives = 83/166 (50%)

Query:    34 SLHTFRSRWLLKSVSPQQFITVANAIDAAKQWDSDLVEAKYIKDLEDNLSIIRLRFGEHS 93
             +LH  + R     V  +    V + I+  K+WDS+++E   I  L  N  +    +    
Sbjct:    64 TLHKIKCRMECCDVPAETLYDVLHDIEYRKKWDSNVIETFDIARLTVNADVGYYSW-RCP 122

Query:    94 KPLFRNREFIVYERRETMEDGTLVVAVA-SLPKEIAAGLHPKQNNSIRGLLLQSGWVVEK 152
             KPL +NR+ I       M    +++  +   PK      +P + + +R + +Q+G++++ 
Sbjct:   123 KPL-KNRDVITLRSWLPMGADYIIMNYSVKHPK------YPPRKDLVRAVSIQTGYLIQS 175

Query:   153 LEDDSCMVTYVVQLDPAGWVPKCFVNRLNTKLVMIIENLRKLAQAC 198
                 SC++TY+ Q+DP G +PK  VN+ +  L    + ++K+ +AC
Sbjct:   176 TGPKSCVITYLAQVDPKGSLPKWVVNKSSQFLAP--KAMKKMYKAC 219


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      204       204   0.00094  111 3  11 22  0.47    32
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  177 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.81u 0.10s 18.91t   Elapsed:  00:00:01
  Total cpu time:  18.81u 0.10s 18.91t   Elapsed:  00:00:01
  Start:  Sat May 11 09:28:12 2013   End:  Sat May 11 09:28:13 2013

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