BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028753
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZNA5|FRRS1_HUMAN Ferric-chelate reductase 1 OS=Homo sapiens GN=FRRS1 PE=2 SV=2
Length = 592
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 55 IAVHGLLLWASMGFLTPVGILTIRMSNKVDS---VIKARVFVYLHIILQMLSVVLATVGA 111
+ VHG L++ + +G+L R V S ++ + +H +L + VL +
Sbjct: 370 LKVHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAF 429
Query: 112 IMSI--RNFENSFNNNHQRLGLALYGALWLQVSIGFFKPPRGNKRRSMWYVVHWLLGTAI 169
+M R + H LG + LQ + F+PP + RR M+ HW +GTA
Sbjct: 430 VMPFIYRGGWSRHAGYHPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMFNWTHWSMGTAA 489
Query: 170 SLVGIINIYTGLK 182
++ + ++ G+
Sbjct: 490 RIIAVAAMFLGMD 502
>sp|Q6INU7|FRRS1_XENLA Putative ferric-chelate reductase 1 OS=Xenopus laevis GN=frrs1 PE=2
SV=1
Length = 590
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 55 IAVHGLLLWASMGFLTPVGILTIRMSNKV---DSVIKARVFVYLHIILQMLSVVLATVGA 111
I +HG +++ + +G++ R V S+ +++ +H L + +V L V
Sbjct: 369 IKLHGAMMFIAWMTTVSIGVIIARFFKPVWPTSSLFGEKIWFQIHRCLMITTVFLTVVAF 428
Query: 112 IMSI--RNFENSFNNNHQRLGLALYGALWLQVSIGFFKPPRGNKRRSMWYVVHWLLGTAI 169
++ R + + H LG+ + LQ + F+PP RR ++ HW GTA
Sbjct: 429 VLPFIYRGYFSKRAGYHPHLGVTVMILTVLQPVLAVFRPPPQTHRRGIFNWTHWATGTAA 488
Query: 170 SLVGIINIYTGLK 182
++ + ++ G+
Sbjct: 489 RIIAVAAMFLGMD 501
>sp|Q8K385|FRRS1_MOUSE Ferric-chelate reductase 1 OS=Mus musculus GN=FRRS1 PE=1 SV=1
Length = 592
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 48 GPQTASHIAVHGLLLWASMGFLTPVGILTIRMSNKVDS---VIKARVFVYLHIILQMLSV 104
G +++ + HG L++ + +G+L R V S ++ + +H +L + +
Sbjct: 363 GSRSSPLLKAHGALMFVAWMTTVSIGVLVARFFRSVWSKAFFLREAAWFQVHRMLMVATS 422
Query: 105 VLATVGAIMSI--RNFENSFNNNHQRLGLALYGALWLQVSIGFFKPPRGNKRRSMWYVVH 162
+L V ++ R + H LG + LQ + F+PP + RR ++ H
Sbjct: 423 LLTCVAFVLPFVYRGGWSWRAGYHPYLGCTVMTLAVLQPLLATFRPPLHDPRRQVFNWTH 482
Query: 163 WLLGTAISLVGIINIYTGLK 182
W +GTA ++ + ++ G+
Sbjct: 483 WSVGTAARIIAVAAMFLGMD 502
>sp|Q9QXA6|BAT1_MOUSE B(0,+)-type amino acid transporter 1 OS=Mus musculus GN=Slc7a9 PE=2
SV=1
Length = 487
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 60 LLLWASMGFLTPVGILTIRMSNKVDSVIKARVFVYLHIILQMLSVVLATVGAIMSIRNFE 119
LL A++ F+T V L++R+ + V +V A V + II+ V LA +++NF+
Sbjct: 153 LLAAAAILFITTVNALSVRLGSYVQNVFTAAKMVIVAIIIISGLVFLAQ----GNVKNFQ 208
Query: 120 NSFNNNHQRLG---LALYGALW 138
NSF +G LA Y LW
Sbjct: 209 NSFEGTQTSVGAISLAFYNGLW 230
>sp|A2VE04|FRRS1_BOVIN Ferric-chelate reductase 1 OS=Bos taurus GN=FRRS1 PE=2 SV=1
Length = 591
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 55 IAVHGLLLWASMGFLTPVGILTIRMSNKV--DSVIKARVFVYLHIILQMLSVVLATVGAI 112
+ VHG L++ + VG+L R V ++ + +H L + + L + +
Sbjct: 370 LKVHGALMFVAWMTTVSVGVLIARFFKPVWSKALFGDAAWFQVHRTLMLTTSALTFIAFL 429
Query: 113 MSI--RNFENSFNNNHQRLGLALYGALWLQVSIGFFKPPRGNKRRSMWYVVHWLLGTAIS 170
+ R N H LG + LQ+ + F+PP + RR M+ HW +GTA
Sbjct: 430 LPFIYRGGWNWHAGYHPYLGFIVMVLAVLQLLLAAFRPPLHDPRRQMFNWTHWSMGTAAR 489
Query: 171 LVGIINIYTGLK 182
++ + ++ G+
Sbjct: 490 IIAVAAMFLGMD 501
>sp|P82252|BAT1_RAT B(0,+)-type amino acid transporter 1 OS=Rattus norvegicus GN=Slc7a9
PE=1 SV=1
Length = 487
Score = 35.0 bits (79), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 70 TPVGILTIRMSNKVDSVIKARVFVYLHIILQMLSVVLATVGAIMSIRNFENSFNNNHQRL 129
T V L++R+ + V +V A V + II+ V+LA +++NF+NSF + +
Sbjct: 163 TTVNALSVRLGSYVQNVFTAAKLVIVAIIIISGLVLLAQ----GNVKNFQNSFEGSQTSV 218
Query: 130 G---LALYGALW 138
G LA Y LW
Sbjct: 219 GSISLAFYNGLW 230
>sp|B4UDT5|RL1_ANASK 50S ribosomal protein L1 OS=Anaeromyxobacter sp. (strain K) GN=rplA
PE=3 SV=1
Length = 234
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 10 FIVPSCYVIFLPFVGCLSNDEFSKSRNHKSIQENLYKMGPQTASHIAVHGLLLWASMG 67
F V ++ +PF G S D N +I E +YK PQTA + V + L +MG
Sbjct: 163 FRVEKAGIVHVPF-GKASFDPDKLKANFSAIMEVIYKAKPQTAKGVYVKNVTLSTTMG 219
>sp|B8JB73|RL1_ANAD2 50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain
2CP-1 / ATCC BAA-258) GN=rplA PE=3 SV=1
Length = 234
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 10 FIVPSCYVIFLPFVGCLSNDEFSKSRNHKSIQENLYKMGPQTASHIAVHGLLLWASMG 67
F V ++ +PF G S D N +I E +YK PQTA + V + L +MG
Sbjct: 163 FRVEKAGIVHVPF-GKASFDPDKLKANFSAIMEVIYKAKPQTAKGVYVKNVTLSTTMG 219
>sp|Q2II81|RL1_ANADE 50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=rplA PE=3 SV=1
Length = 234
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 10 FIVPSCYVIFLPFVGCLSNDEFSKSRNHKSIQENLYKMGPQTASHIAVHGLLLWASMG 67
F V ++ +PF G S D N +I E +YK PQTA + V + L +MG
Sbjct: 163 FRVEKAGIVHVPF-GKASFDPEKLKANFSAIMEVIYKAKPQTAKGVYVKNVTLSTTMG 219
>sp|Q6FST5|DBP6_CANGA ATP-dependent RNA helicase DBP6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP6 PE=3 SV=1
Length = 651
Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 72 VGILTIRMSNKVDSVIKARVFVYLHIILQMLSVVLATVGAIMSIRNFENSFNNNHQRL 129
+ L+ R NK+ +I + ++ + Q +S + ++++ ENSFN H+RL
Sbjct: 268 IQTLSSRTVNKLRVLIILPTKLLINQVFQTMSQLAEGTSLVITVSKLENSFNEEHKRL 325
>sp|Q9SYI2|AB3B_ARATH ABC transporter B family member 3 OS=Arabidopsis thaliana GN=ABCB3
PE=1 SV=1
Length = 1229
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 133 LYGALWLQVSIGFFKPPRGNKRRS-MWYVVHWLLGTA 168
++G L+ +V FFKPP KR S W ++ LLG A
Sbjct: 678 IFGILFAKVIEAFFKPPHDMKRDSRFWSMIFVLLGVA 714
>sp|P49384|ADH3_KLULA Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ADH3 PE=3 SV=2
Length = 374
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 30 EFSKSRNHKSIQENLYKMGPQTASHIAVHGLLLWASMGFLTPVGILTIRMSNKVDSVIKA 89
+F+K+++ + + + GP +++V + AS F+ P G + + + +VIK+
Sbjct: 247 DFTKTKDMVAEIQEITNGGPHGVINVSVSEAAMNASTQFVRPTGTVVL-VGLPAGAVIKS 305
Query: 90 RVFVYLHIILQMLSVVLATVGAIMSIRNFENSFNNNH 126
VF + +++ +++ + VG R N F N H
Sbjct: 306 EVFSH---VVKSINIKGSYVGNRADTREAINFFANGH 339
>sp|Q67ZF6|ACFR3_ARATH Probable transmembrane ascorbate ferrireductase 3 OS=Arabidopsis
thaliana GN=CYB561C PE=2 SV=1
Length = 224
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 57 VHGLLLWASMGFLTPVGILTIRMSNKVDSVIKARVFVYLHIILQMLSVVLATVGAIMSIR 116
VH L++ FL ++T + + V K +H L ++ +VL VG + R
Sbjct: 56 VHPFLMYCGFLFLVGQAMMTYKTAYASHQVQKM-----VHGGLHLIGLVLGIVGICAAFR 110
Query: 117 NFENSFN-----NNHQRLGLA---LYGALWLQVSIGFFKPPRGNKRRSMWYVVHWLLGTA 168
F + N + H +GL L G WL + F P + R+ H L G A
Sbjct: 111 -FHDKVNLKDMVSLHSWIGLTTFILLGVQWLFGAFTFLAPQSSSGTRTRMMPWHVLGGRA 169
Query: 169 ISLVGIINIYTGL 181
+ +GI+ TGL
Sbjct: 170 LLYMGIVAALTGL 182
>sp|P0C6X1|R1AB_CVH22 Replicase polyprotein 1ab OS=Human coronavirus 229E GN=rep PE=1 SV=1
Length = 6758
Score = 30.8 bits (68), Expect = 6.1, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 53 SHIAVHGLLLWASMGFLTPVGILTIRMSNKVDSVIKARVFVYLHIILQMLSVVLATV 109
+ + V+ +W + GFLTP IL + +S + V+K +V ++L + L + S+++A +
Sbjct: 3290 AELFVYTTTIWVNPGFLTPFMILLVALSLCLTFVVKHKV-LFLQVFL-LPSIIVAAI 3344
>sp|P0C6U2|R1A_CVH22 Replicase polyprotein 1a OS=Human coronavirus 229E GN=1a PE=1 SV=1
Length = 4085
Score = 30.8 bits (68), Expect = 6.3, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 53 SHIAVHGLLLWASMGFLTPVGILTIRMSNKVDSVIKARVFVYLHIILQMLSVVLATV 109
+ + V+ +W + GFLTP IL + +S + V+K +V ++L + L + S+++A +
Sbjct: 3290 AELFVYTTTIWVNPGFLTPFMILLVALSLCLTFVVKHKV-LFLQVFL-LPSIIVAAI 3344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,296,607
Number of Sequences: 539616
Number of extensions: 2687172
Number of successful extensions: 6730
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 6715
Number of HSP's gapped (non-prelim): 32
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)