BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028755
(204 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus
Pfu-264096-001
Length = 186
Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 114/168 (67%)
Query: 37 AAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFI 96
++P+HDLE GP P++ +IEI KGS+ KYELDKK+GL+ +DRVLYS YP +YG I
Sbjct: 8 GSNPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGII 67
Query: 97 PRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHY 156
PRT ED+DP D+++IM+EPV P + A+ IGL MID G+KD K++AV +DP ++ +
Sbjct: 68 PRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDW 127
Query: 157 NDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 204
DI ++P L EI FF+ YK+ + KE+ V + A A + +++
Sbjct: 128 KDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAI 175
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|B Chain B, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|C Chain C, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
Length = 195
Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 113/172 (65%)
Query: 33 RRSVAAHPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHN 92
R S +P+HDLE GP P++ +IEI KGS+ KYELDK++GL+ +DRVLY+ YP +
Sbjct: 13 RGSHMMNPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYPVD 72
Query: 93 YGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPE 152
YG IPRT ED DP D+++IM+EP P + A+ IGL MID G+KD K++AV +DP
Sbjct: 73 YGIIPRTWYEDGDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPY 132
Query: 153 YRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 204
++ + DI ++P L EI FF+ YK+ E KE+ V + A A + +++
Sbjct: 133 FKDWKDISDVPKAFLDEIAHFFKRYKELEGKEIIVEGWEGAEAAKREILRAI 184
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|B Chain B, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|C Chain C, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|D Chain D, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|E Chain E, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|F Chain F, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3Q4W|A Chain A, The Structure Of Archaeal Inorganic Pyrophosphatase In
Complex With Substrate
pdb|3Q5V|A Chain A, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q5V|B Chain B, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q9M|A Chain A, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|B Chain B, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|C Chain C, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q3L|A Chain A, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|B Chain B, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|C Chain C, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|D Chain D, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|E Chain E, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|F Chain F, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3R5U|A Chain A, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5U|B Chain B, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5V|A Chain A, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|B Chain B, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|C Chain C, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|D Chain D, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|E Chain E, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|F Chain F, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
Length = 178
Score = 150 bits (379), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 110/166 (66%)
Query: 39 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPR 98
+P+H+LE GP P++ +IEI KGS+ KYELDKK+GL+ +DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 99 TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 158
T +D DP D+++IM+EPV P + A+ IG+M M D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 159 IKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 204
I ++P L EI FF+ YK+ + K + + A +A + +++
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAI 167
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From
Thermococcus Thioreducens Bound To Hydrolyzed Product At
0.99 Angstrom Resolution
Length = 178
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 109/166 (65%)
Query: 39 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPR 98
+P+H+LE GP P++ +IEI KGS+ KYELDK +GL+ +DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 99 TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 158
T +D DP D+++IM+EPV P + A+ IG+M M D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 159 IKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 204
I ++P L EI FF+ YK+ + K + + A +A + +++
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAI 167
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|B Chain B, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|C Chain C, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|D Chain D, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|E Chain E, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|F Chain F, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
Length = 178
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 106/166 (63%)
Query: 39 HPWHDLEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPR 98
+P+H+LE GP P++ +IEI KGS+ KYELDKK+GL+ +DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 99 TLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYND 158
T +D DP D+ +I +EPV P + A+ IG+ D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIXVIXREPVYPLTIIEARPIGIXKXEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 159 IKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 204
I ++P L EI FF+ YK+ + K + + A +A + +++
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAI 167
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|B Chain B, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|C Chain C, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|D Chain D, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|E Chain E, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|F Chain F, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase
Length = 173
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 3/161 (1%)
Query: 47 GPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDP 106
G AP + N ++EI +GS +KYE D + G+I VDRVLY+S+ YP NYGFIP TL ED DP
Sbjct: 6 GKNAPDVVNVLVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDP 65
Query: 107 LDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPP 164
LDVL+I + PG + + IG++ M D+ +D KI+AV D DP + + DI +LP
Sbjct: 66 LDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQ 125
Query: 165 HRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
+I FFE YK+ E K V ++ + A++A N +Q ++
Sbjct: 126 ATKNKIVHFFEHYKELEPGKYVKISGWGSATEAKNRIQLAI 166
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
Length = 180
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 4/166 (2%)
Query: 43 DLEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
++ +G P+ N ++E+ G + +KYE+DKKSG + VDR LY+S+VYP NYGF+P TL
Sbjct: 9 EIAVGKNPPEDVNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSMVYPGNYGFVPHTLS 68
Query: 102 EDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYN--DI 159
ED DP+DVLI P+LPGC + IG + M D G KD+KIIA+ R+ N D
Sbjct: 69 EDGDPIDVLICNTRPLLPGCVINVYPIGALIMEDDGGKDEKIIAIPTPKLTQRYNNIHDY 128
Query: 160 KELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
+LP L +I FFE YK E K + + S A+ ++Q++
Sbjct: 129 TDLPEITLKQIEHFFEHYKDLEPGKWAKIEGWRDKSFAHELIKQAI 174
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|B Chain B, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|C Chain C, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
Length = 169
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Query: 54 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIM 113
F+ IEI KG + KYE+D ++G + +DR LY+ + YP +YGFI TL +D DPLD L+++
Sbjct: 10 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 69
Query: 114 QEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRF 173
+PV PG + A+ +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 70 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 129
Query: 174 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
F YK E K V D++ ++A VQ+S+
Sbjct: 130 FVHYKDLEPGKFVKAADWVDRAEAEAEVQRSV 161
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0
Length = 172
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Query: 54 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIM 113
F+ IEI KG + KYE+D ++G + +DR LY+ + YP +YGFI TL +D DPLD L+++
Sbjct: 13 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 72
Query: 114 QEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRF 173
+PV PG + A+ +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 73 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 132
Query: 174 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
F YK E K V D++ ++A VQ+S+
Sbjct: 133 FVHYKDLEPGKFVKAADWVDRAEAEAEVQRSV 164
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0
Length = 171
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Query: 54 FNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIM 113
F+ IEI KG + KYE+D ++G + +DR LY+ + YP +YGFI TL +D DPLD L+++
Sbjct: 12 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 71
Query: 114 QEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRF 173
+PV PG + A+ +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 72 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 131
Query: 174 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
F YK E K V D++ ++A VQ+S+
Sbjct: 132 FVHYKDLEPGKFVKAADWVDRAEAEAEVQRSV 163
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
pdb|4ECP|B Chain B, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
Length = 167
Score = 126 bits (317), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Query: 47 GPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDP 106
GPG+ F+ IEI KG + KYE+D K+G + +DR LY+ + YP +YGFI TL ED DP
Sbjct: 1 GPGSMVQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDP 60
Query: 107 LDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHR 166
LD L+++ EP+ PG + A+ +G+ M+D+ DDK++ V +D + H + I ++P
Sbjct: 61 LDALVLLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFE 120
Query: 167 LAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
L I+ FF YK E K V D++ +A VQ+S+
Sbjct: 121 LDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSV 159
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
pdb|2BQY|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
Length = 173
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 3/152 (1%)
Query: 56 CVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQE 115
VIEI K S +KYELDK+SG +MVDRVLY + YP NYGF+P TL D DP+D L++
Sbjct: 17 VVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDV 76
Query: 116 PVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRF 173
G ++A+ +G++ M D+ D+K+IA+ D DP + + DI +L H L +I+ F
Sbjct: 77 AFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHF 136
Query: 174 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
FE YK E NK V V F A +++++
Sbjct: 137 FETYKDLEPNKWVKVKGFENKESAIKVLEKAI 168
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|C Chain C, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|D Chain D, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|E Chain E, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|F Chain F, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|G Chain G, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|H Chain H, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|I Chain I, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|J Chain J, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|K Chain K, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|L Chain L, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
Length = 197
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
Query: 44 LEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCE 102
+ IG P+ N +IE+ G + +KYE+DKK+G ++VDR LY+ + YP NYGF+P TL E
Sbjct: 27 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSE 86
Query: 103 DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIK 160
D DP+DVL+ P++PGC + + IG++ M D KD+KIIAV + Y +D
Sbjct: 87 DGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYT 146
Query: 161 ELPPHRLAEIRRFFEDYKKNE-NKEVAVNDF 190
++P L +I FFE YK E K V + D+
Sbjct: 147 DMPEITLKQIAHFFEHYKDLEPGKWVKIGDW 177
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
Length = 173
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 56 CVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQE 115
VIEI K S +KYELDK+SG + VDRVLY + YP NYGF+P TL D DP+D L++
Sbjct: 17 VVIEISKHSNIKYELDKESGALXVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDV 76
Query: 116 PVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRF 173
G ++A+ +G++ D+ D+K+IA+ D DP + + DI +L H L +I+ F
Sbjct: 77 AFQAGSVVKARLVGVLNXEDESGXDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHF 136
Query: 174 FEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
FE YK E NK V V F A +++++
Sbjct: 137 FETYKDLEPNKWVKVKGFENKESAIKVLEKAI 168
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Thermus Thermophilus
Length = 174
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 85/141 (60%)
Query: 44 LEIGPGAPKIFNCVIEIGKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCED 103
L +G AP++ + VIE+ +GS KYE D G I +DRVL + YP +YGFIP TL ED
Sbjct: 6 LPVGDKAPEVVHMVIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAED 65
Query: 104 NDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELP 163
DPLD L++ P+LPG + + +GL+ M D+ D K+I V A+D H DI ++P
Sbjct: 66 GDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVP 125
Query: 164 PHRLAEIRRFFEDYKKNENKE 184
EI+ FFE YK E K+
Sbjct: 126 EGVKQEIQHFFETYKALEAKK 146
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3EIY|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound Pyrophosphate
pdb|3EIZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei, H32 Crystal Form
pdb|3EJ0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound
N-(Pyridin-3-Ylmethyl) Aniline, H32 Crystal Form
pdb|3EJ2|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound 5-Amino-1-(4-
Chlorophenyl)-1h-Pyrazole-4-Carbonitrile, H32 Crystal
Form
pdb|3GVF|A Chain A, 1.7 Angstrom Crystal Structure Of Inorganic
Pyrophosphatase From Burkholderia Pseudomallei Bound
With Phosphate
Length = 196
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 47 GPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ FN +IEI S+ VKYE DK GL++VDR + + + YP NYGFIP+TL D D
Sbjct: 30 GKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDGD 89
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELP 163
P+DVL+I P+L G +RA+A+G++ M D+ D K++AV D P + I ++P
Sbjct: 90 PVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVP 149
Query: 164 PHRLAEIRRFFEDYKKNE 181
+ +I+ FFE YK E
Sbjct: 150 AYLKDQIKHFFEQYKALE 167
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
pdb|3LD3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
Length = 199
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 100/166 (60%), Gaps = 4/166 (2%)
Query: 43 DLEIGPGAPKIFNCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
D+ G AP+ N VIE+ + S VKYE D+K+G + VDR L +++ YP NYGFIP T+
Sbjct: 26 DIGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIPNTIA 85
Query: 102 EDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDI 159
D DP+DVL++ + PV+PG + + +G++ M D+ +D K++AV A D Y + +
Sbjct: 86 GDGDPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNY 145
Query: 160 KELPPHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
+LP L I FF YKK E +K V+V + A+ A ++ ++
Sbjct: 146 SDLPSSFLDSISHFFSFYKKLEKDKFVSVGCWQDAASAKELIRSAI 191
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Ehrlichia Chaffeensis
Length = 193
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 47 GPGAPKIFNCVIEIGKGS-KVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G PK N +IEI + S VKYE DK+ L VDR L +S+ YP NYGFIP T D D
Sbjct: 30 GDNVPKEINVIIEISQNSCPVKYEFDKEKNLFCVDRFLPTSMYYPCNYGFIPHTCAGDGD 89
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELP 163
P+DVL+ + PV+ G +RA+ +G++ M D+ +D KI+AV D Y + D + P
Sbjct: 90 PVDVLVASRFPVMSGAVIRARPVGVLVMHDESGEDVKILAVPTHKVDQYYNNIKDYSDFP 149
Query: 164 PHRLAEIRRFFEDYKK-NENKEVAV 187
L I FF YKK E+K V+V
Sbjct: 150 VSFLNSISHFFTFYKKLEEDKFVSV 174
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3EMJ|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|G Chain G, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|H Chain H, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|I Chain I, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|J Chain J, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|K Chain K, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|L Chain L, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
Length = 173
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
Query: 55 NCVIEIGKGSK-VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIM 113
N +IEI S +KYE DK+SG + VDR + +++ YP NYGFIP TL D DP+DVL++
Sbjct: 17 NVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVA 76
Query: 114 QEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIR 171
PV+PG ++ +AIG++ M D+ D+KIIAV D + H ++ +L I
Sbjct: 77 HHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIV 136
Query: 172 RFFEDYKKNE 181
FFE YK E
Sbjct: 137 HFFEHYKDLE 146
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase
pdb|2EIP|B Chain B, Inorganic Pyrophosphatase
pdb|1IPW|A Chain A, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1IPW|B Chain B, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1JFD|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1JFD|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1FAJ|A Chain A, Inorganic Pyrophosphatase
pdb|1INO|A Chain A, Recombinant Inorganic Pyrophosphatase From Escherichia
Coli
Length = 175
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ VIEI +KYE+DK+SG + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELP 163
P+DVL+ P+ PG +R + +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
A+I FFE YK E K V V + A A + S
Sbjct: 128 ELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASF 169
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|C Chain C, Structure Of Inorganic Pyrophosphatase
pdb|1I6T|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1I40|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|2AU6|A Chain A, Crystal Structure Of Catalytic Intermediate Of Inorganic
Pyrophosphatase
pdb|2AU8|A Chain A, Catalytic Intermediate Structure Of Inorganic
Pyrophosphatase
pdb|2AU9|A Chain A, Inorganic Pyrophosphatase Complexed With Substrate
pdb|2AUU|A Chain A, Inorganic Pyrophosphatase Complexed With Magnesium
Pyrophosphate And Fluoride
pdb|1IGP|A Chain A, X-Ray Crystallographic Studies Of Recombinant Inorganic
Pyrophosphatase From Escherichia Coli
Length = 175
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ VIEI +KYE+DK+SG + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELP 163
P+DVL+ P+ PG R + +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
A+I FFE YK E K V V + A A + S
Sbjct: 128 ELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASF 169
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|B Chain B, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|C Chain C, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|D Chain D, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|E Chain E, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|F Chain F, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
Length = 178
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 54 FNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLII 112
FN +IEI G +VKYE DK+ G + VDR +S YP NYGF+P TL +D DPLDVL++
Sbjct: 17 FNVIIEIPANGGEVKYEYDKELGFLTVDRFXPTSXRYPCNYGFVPSTLAQDGDPLDVLVL 76
Query: 113 MQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV-----CADDPEYRHYNDIKELPPHRL 167
PV PG R +A+G+ D+ +D K++AV C Y +K++ L
Sbjct: 77 TPVPVQPGVLXRVRALGIXKXEDEAGEDSKVLAVPVVKACR---AYEAIQSLKDISSLLL 133
Query: 168 AEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
I FFE YK E NK V + A + S+
Sbjct: 134 DAISHFFERYKDLEPNKWAKVKGWEDKEAAKKEFEASI 171
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n
Length = 175
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ VIEI +KYE+DK+SG + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELP 163
P+DVL+ P+ PG +R + +G++ M ++ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTNEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
A+I FFE YK E K V V + A A + S
Sbjct: 128 ELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASF 169
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n
pdb|1MJW|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D42n
Length = 175
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ VIEI +KYE+DK+SG + V+R + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVNRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELP 163
P+DVL+ P+ PG +R + +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
A+I FFE YK E K V V + A A + S
Sbjct: 128 ELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASF 169
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n
pdb|1MJX|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D65n
Length = 175
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ VIEI +KYE+DK+SG + VDR + +++ YP NYG+I TL + D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLNGD 67
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELP 163
P+DVL+ P+ PG +R + +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
A+I FFE YK E K V V + A A + S
Sbjct: 128 ELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASF 169
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic
Pyrophosphatase
Length = 175
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ VIEI +KYE+DK+SG + VD+ + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELP 163
P+DVL+ P+ PG R + +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
A+I FFE YK E K V V + A A + S
Sbjct: 128 ELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASF 169
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n
pdb|1MJY|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D70n
Length = 175
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P+ VIEI +KYE+DK+SG + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELP 163
P++VL+ P+ PG R + +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVNVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQSM 204
A+I FFE YK E K V V + A A + S
Sbjct: 128 ELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASF 169
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The
Oil- Degrading Bacterium Oleispira Antarctica
Length = 176
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 47 GPGAPKIFNCVIEI-GKGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDND 105
G P IEI S +KYE+DK ++VDR + YP NYG+I TL +D D
Sbjct: 10 GKDLPNDIYVAIEIPANASPIKYEIDKDXDALLVDRFXATPXFYPANYGYINNTLADDGD 69
Query: 106 PLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPE--YRHYNDIKELP 163
LDVL+I PV PG +RA+ +G++ D+ D+K++AV + Y +DI ++P
Sbjct: 70 ALDVLVITPYPVAPGSVIRARPVGVLKXSDEAGGDEKLLAVPHEKLTQLYNDIHDIDDVP 129
Query: 164 PHRLAEIRRFFEDYKKNE-NKEVAVNDFLPASDAYNSVQQS 203
+I FFE YK E K V V + A A ++ +S
Sbjct: 130 QLLKDQIVHFFEHYKDLEKGKWVKVEGWENADAARAAIVKS 170
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1M38|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 287
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 43 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 102
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 103 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 162
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 163 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 194
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUJ|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITREETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUK|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGI|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1E6A|A Chain A, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|1E6A|B Chain B, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|2IHP|A Chain A, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|2IHP|B Chain B, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|1E9G|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1E9G|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 286
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|8PRK|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
Length = 287
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 43 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLKFVRNCFPHHGYIHNYGAFPQTWE 102
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 103 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 162
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 163 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 194
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
pdb|2IK1|B Chain B, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
Length = 286
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HN+G P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNFGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
pdb|2IK0|B Chain B, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
Length = 286
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V++I + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVDIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
pdb|2IK7|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
Length = 286
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP++VL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPINVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase
pdb|1YPP|B Chain B, Acid Anhydride Hydrolase
Length = 286
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYELDKKSGL--IMVD---------RVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ K+ L I+ D R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTAKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|117E|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|2IK4|A Chain A, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
pdb|2IK4|B Chain B, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
Length = 286
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DN+P+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNEPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
pdb|2IK6|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
Length = 286
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP++VL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIEVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
pdb|2IK9|B Chain B, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
Length = 286
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ DNDP+DVL I + G + KA+G+M ++D+GE + K+IA+ +
Sbjct: 102 DPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETEWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
pdb|2IK2|B Chain B, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
Length = 286
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 26/152 (17%)
Query: 53 IFNCVIEIGKGSKVKYEL-----------DKKSGLIMVDRVLYSSVVYPHNYGFIPRTLC 101
IFN V+EI + + K E+ D K G + R + Y HNYG P+T
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWE 101
Query: 102 E------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD 149
+ +NDP+DVL I + G + KA+G+M ++D+GE D K+IA+ +
Sbjct: 102 DPNVSHPETKAVGENDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIN 161
Query: 150 DPEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
DP NDI+++ P L +F YK
Sbjct: 162 DPLAPKLNDIEDVEKYFPGLLRATNEWFRIYK 193
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
pdb|1PYP|B Chain B, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
Length = 285
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 25/151 (16%)
Query: 53 IFNCVIEIGKGSKVKYELDKKS----------GLIMVDRVLYSSVVYPHNYGFIPRTLCE 102
IFN V+EI + + K E+ K+ G + R + Y HNYG P+T +
Sbjct: 42 IFNMVVEIPRWTNAKLEITKEETLNPIIQNTKGKLRFVRNCFPHHGYIHNYGAFPQTWED 101
Query: 103 ------------DNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD 150
DN+P+DVL I + G KA+G+M ++D+GE D K+IA+ +D
Sbjct: 102 PNVSHPETKAVGDNNPIDVLQIGETIAYTGQVKEVKALGIMALLDEGETDWKVIAIDIND 161
Query: 151 PEYRHYNDIKELP---PHRLAEIRRFFEDYK 178
P NDI+++ P L +F YK
Sbjct: 162 PLAPKLNDIEDVEKYFPGLLRATDEWFRIYK 192
>pdb|1Q05|A Chain A, Crystal Structure Of The Cu(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q05|B Chain B, Crystal Structure Of The Cu(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q06|A Chain A, Crystal Structure Of The Ag(i) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q06|B Chain B, Crystal Structure Of The Ag(i) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q07|A Chain A, Crystal Structure Of The Au(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
pdb|1Q07|B Chain B, Crystal Structure Of The Au(I) Form Of E. Coli Cuer, A
Copper Efflux Regulator
Length = 135
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 149 DDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASDA 196
+DP+ RH D+K ++AEI R E+ + ++ +A+ + P D+
Sbjct: 71 NDPQ-RHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDS 117
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 170 IRRFFEDYKKNENKEVAVNDFLPASDAYNSVQQSM 204
+ RFFE +N++ V + +FL A ++ SM
Sbjct: 59 VERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSM 93
>pdb|4A2S|A Chain A, Structure Of The Engineered Retro-aldolase Ra95.5
Length = 258
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 11/63 (17%)
Query: 77 IMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPM-ID 135
I+ +R L S + Y +YG P L D + LD+ + A+ IG+ M +
Sbjct: 136 ILTERELESLLEYARSYGMEPLILINDENDLDI----------ALRIGARFIGIFSMNFE 185
Query: 136 QGE 138
GE
Sbjct: 186 TGE 188
>pdb|4A29|A Chain A, Structure Of The Engineered Retro-Aldolase Ra95.0
Length = 258
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 77 IMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDV 109
I+ +R L S + Y +YG P L D + LD+
Sbjct: 136 ILTERELESLLEYARSYGMEPLILINDENDLDI 168
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B
From Arthrobacter Tad20
Length = 435
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 167 LAEIRRFFEDYKKNENKEVAVNDFLPAS 194
LAE R+ + Y NK+ ++ FLPA+
Sbjct: 209 LAEFRKQLDAYGSTNNKKYVLSAFLPAN 236
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,512,346
Number of Sequences: 62578
Number of extensions: 275151
Number of successful extensions: 734
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 643
Number of HSP's gapped (non-prelim): 49
length of query: 204
length of database: 14,973,337
effective HSP length: 94
effective length of query: 110
effective length of database: 9,091,005
effective search space: 1000010550
effective search space used: 1000010550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)