BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028756
(204 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224115286|ref|XP_002332207.1| predicted protein [Populus trichocarpa]
gi|222875314|gb|EEF12445.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 161/192 (83%), Gaps = 1/192 (0%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE SEDG E+LFDHGAPFF+ +N+DVL LV EWES GLV EWK N GSFD +SKKF
Sbjct: 44 MSQRREISEDGKELLFDHGAPFFSASNSDVLRLVHEWESKGLVEEWKENCGSFDCISKKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++I+Q+ NKKYVG+PGMNSICKALC++ GVESKFGV +GR E L+D+ WS++GLDGQ+
Sbjct: 104 LDIEQEAPNKKYVGIPGMNSICKALCNETGVESKFGVSIGRLECLDDEK-WSLTGLDGQN 162
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVV SDK + SPRF DVTGRPPPLDL+ P+LA+KL++IPV+PCFALMLAFSEPL
Sbjct: 163 LGRFSGVVVSDKGIASPRFTDVTGRPPPLDLSLTPELALKLQDIPVSPCFALMLAFSEPL 222
Query: 181 SSDPSYQISYLN 192
SS S+ N
Sbjct: 223 SSISVKGFSFKN 234
>gi|147778135|emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]
Length = 369
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 157/192 (81%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS R+E +EDG E++FDHGAP FTV+N DVL +VREWE+ GLVAEWK N SFD +S+KF
Sbjct: 44 MSYRKEITEDGKELVFDHGAPLFTVSNPDVLGIVREWEARGLVAEWKENFASFDCISRKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++ +++G++KKYVGVP MNSIC+ALCH+PGVESKFGVGVG EW ++KNLWS++GLDGQ+
Sbjct: 104 IDFEKEGLSKKYVGVPVMNSICRALCHEPGVESKFGVGVGSLEWFDEKNLWSLTGLDGQN 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F GVVASDKN+ S RF DVTGRPPPLDL P+LA KL+E+PV CF LMLAF++PL
Sbjct: 164 LGNFEGVVASDKNIFSKRFTDVTGRPPPLDLNLIPELAAKLQEVPVCSCFVLMLAFTKPL 223
Query: 181 SSDPSYQISYLN 192
SS S+ N
Sbjct: 224 SSISVKGFSFKN 235
>gi|225462207|ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264528 [Vitis vinifera]
gi|296082792|emb|CBI21797.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 157/192 (81%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS R+E +EDG E++FDHGAP FTV+N DVL +VREWE+ GLVAEWK N SFD +S+KF
Sbjct: 44 MSYRKEITEDGKELVFDHGAPLFTVSNPDVLGIVREWEARGLVAEWKENFASFDCISRKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++ +++G+++KYVGVP MNSIC+ALCH+PGVESKFGVGVG EW ++KNLWS++GLDGQ+
Sbjct: 104 IDFEKEGLSEKYVGVPVMNSICRALCHEPGVESKFGVGVGSLEWFDEKNLWSLTGLDGQN 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F GVVASDKN+ S RF DVTGRPPPLDL P+LA KL+E+PV CF LMLAF++PL
Sbjct: 164 LGNFEGVVASDKNIFSKRFTDVTGRPPPLDLNLIPELAAKLQEVPVCSCFVLMLAFTKPL 223
Query: 181 SSDPSYQISYLN 192
SS S+ N
Sbjct: 224 SSISVKGFSFKN 235
>gi|356525815|ref|XP_003531517.1| PREDICTED: uncharacterized protein LOC100816696 [Glycine max]
Length = 369
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 155/192 (80%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAPFF+V+ ++VL LV+EWES GLVAEWK SFD + KF
Sbjct: 44 MSQRRERTEDGTELHFDHGAPFFSVSKSEVLHLVQEWESRGLVAEWKEKFASFDFHTLKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
NI+Q+G +K+YVGVPGMNSICKALC++ GVESKFGVG+GR EWL D+ LWS+ G+DGQ+
Sbjct: 104 NNIEQEGSSKRYVGVPGMNSICKALCNESGVESKFGVGIGRIEWLHDEKLWSLIGVDGQN 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LGQF G+VASDKN+VSPR +VTGR PPLD+ P+L+ KL ++PV PCF +MLAF+EPL
Sbjct: 164 LGQFKGLVASDKNIVSPRVAEVTGRTPPLDIKLVPELSEKLLDLPVKPCFIVMLAFAEPL 223
Query: 181 SSDPSYQISYLN 192
S+ P S+ N
Sbjct: 224 STVPVKAFSFEN 235
>gi|449460040|ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216187 [Cucumis sativus]
Length = 369
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/184 (66%), Positives = 145/184 (78%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAP+FTV + +VL+LVREWES + AEWK FD S +F
Sbjct: 44 MSQRREIAEDGRELHFDHGAPYFTVNSPEVLSLVREWESKKICAEWKEGFDIFDCFSNQF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +Q+ ++ +YVG PGMNSICKALCH+PGVESKFGV VGR EWLE N W + G+DGQS
Sbjct: 104 TSTEQERVSGRYVGTPGMNSICKALCHEPGVESKFGVSVGRMEWLEKDNSWLLLGIDGQS 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LGQF G+VASDKN+VSPRF VTGR PPLDL+ PDLA+KL+ IPV PCFALMLAF +PL
Sbjct: 164 LGQFEGIVASDKNIVSPRFTSVTGRVPPLDLSLVPDLAIKLQNIPVIPCFALMLAFEQPL 223
Query: 181 SSDP 184
S P
Sbjct: 224 SMIP 227
>gi|449502153|ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224633 [Cucumis sativus]
Length = 369
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/184 (66%), Positives = 145/184 (78%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAP+FTV + +VL+LVREWES + AEWK FD S +F
Sbjct: 44 MSQRREIAEDGRELHFDHGAPYFTVNSPEVLSLVREWESKKICAEWKEGFDIFDCFSNQF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +Q+ ++ +YVG PGMNSICKALCH+PGVESKFGV VGR EWLE N W + G+DGQS
Sbjct: 104 TSTEQERVSGRYVGTPGMNSICKALCHEPGVESKFGVSVGRMEWLEKDNSWLLLGIDGQS 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LGQF G+VASDKN+VSPRF VTGR PPLDL+ PDLA+KL+ IPV PCFALMLAF +PL
Sbjct: 164 LGQFEGIVASDKNIVSPRFTSVTGRVPPLDLSLVPDLAIKLQNIPVIPCFALMLAFEQPL 223
Query: 181 SSDP 184
S P
Sbjct: 224 SMIP 227
>gi|6056384|gb|AAF02848.1|AC009894_19 Hypothetical protein [Arabidopsis thaliana]
Length = 396
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 149/192 (77%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 71 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 130
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 131 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 190
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 191 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 250
Query: 181 SSDPSYQISYLN 192
SS P +S+ N
Sbjct: 251 SSIPVKGLSFKN 262
>gi|22330276|ref|NP_175996.2| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|17978976|gb|AAL47449.1| T6H22.19/T6H22.19 [Arabidopsis thaliana]
gi|22655396|gb|AAM98290.1| At1g55980/T6H22.19 [Arabidopsis thaliana]
gi|222423033|dbj|BAH19499.1| AT1G56000 [Arabidopsis thaliana]
gi|332195208|gb|AEE33329.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 384
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 149/192 (77%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 59 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 118
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 119 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 178
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 179 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 238
Query: 181 SSDPSYQISYLN 192
SS P +S+ N
Sbjct: 239 SSIPVKGLSFKN 250
>gi|186491294|ref|NP_175994.2| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|332195206|gb|AEE33327.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 466
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 149/192 (77%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 197 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 256
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 257 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 316
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 317 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 376
Query: 181 SSDPSYQISYLN 192
SS P +S+ N
Sbjct: 377 SSIPVKGLSFKN 388
>gi|6056386|gb|AAF02850.1|AC009894_21 Hypothetical protein [Arabidopsis thaliana]
Length = 418
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 149/192 (77%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 149 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 208
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 209 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 268
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 269 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 328
Query: 181 SSDPSYQISYLN 192
SS P +S+ N
Sbjct: 329 SSIPVKGLSFKN 340
>gi|297847978|ref|XP_002891870.1| hypothetical protein ARALYDRAFT_474667 [Arabidopsis lyrata subsp.
lyrata]
gi|297337712|gb|EFH68129.1| hypothetical protein ARALYDRAFT_474667 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 145/192 (75%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V N+D +ALV EWES G V+EWK GSFD KF
Sbjct: 59 MSQRREIGEDGKELMFDHGAPFFCVGNSDAMALVHEWESRGFVSEWKQVFGSFDCAFNKF 118
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALCH+ GV++ FG G+ + EWLE++ W ++ G +
Sbjct: 119 LGIQQEGDAKKYVGVPGMNSISKALCHESGVKTMFGTGIAKLEWLEEEIPWLLTDSKGDN 178
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 179 LGRFYGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 238
Query: 181 SSDPSYQISYLN 192
SS P +S+ N
Sbjct: 239 SSIPVKGLSFKN 250
>gi|297847968|ref|XP_002891865.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337707|gb|EFH68124.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 400
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 146/192 (76%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V N+D +ALV EWES G V+EWK SFD S KF
Sbjct: 75 MSQRREIGEDGKELMFDHGAPFFCVGNSDAMALVHEWESRGFVSEWKQVFRSFDYASNKF 134
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 135 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKLEWLEEEIPWLLTDSKGEN 194
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 195 LGRFDGVVASDKNIVSPRFTQVTGLSPPLDLSLVPELATKLQNIPVPPCFSLMLAFKEPL 254
Query: 181 SSDPSYQISYLN 192
SS P +S+ N
Sbjct: 255 SSIPVKGLSFKN 266
>gi|8778321|gb|AAF79330.1|AC002304_23 F14J16.28 [Arabidopsis thaliana]
Length = 499
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 149/223 (66%), Gaps = 31/223 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 199 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 258
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 259 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 318
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPL------------------------------- 149
LG+F+GVVASDKN+VSPRF VTG PPPL
Sbjct: 319 LGRFDGVVASDKNIVSPRFTQVTGLPPPLGKTCTNSVLLQLLFQCYITFISIHFYLLSYT 378
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLN 192
DL+ P+LA KL+ IPV PCF+LMLAF EPLSS P +S+ N
Sbjct: 379 DLSLVPELATKLQNIPVLPCFSLMLAFKEPLSSIPVKGLSFKN 421
>gi|8778316|gb|AAF79325.1|AC002304_18 F14J16.31 [Arabidopsis thaliana]
Length = 444
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 149/223 (66%), Gaps = 31/223 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 78 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 137
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 138 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 197
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPL------------------------------- 149
LG+F+GVVASDKN+VSPRF VTG PPPL
Sbjct: 198 LGRFDGVVASDKNIVSPRFTQVTGLPPPLGKTCTNSVLLQLLFQCYITFISIHFYLLSYT 257
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLN 192
DL+ P+LA KL+ IPV PCF+LMLAF EPLSS P +S+ N
Sbjct: 258 DLSLVPELATKLQNIPVLPCFSLMLAFKEPLSSIPVKGLSFKN 300
>gi|414873203|tpg|DAA51760.1| TPA: deoxyribodipyrimidine photolyase [Zea mays]
Length = 377
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 144/192 (75%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG+E+ FDHGAP+FTVTN +V +V WE+ G+VAEWK FD + KF
Sbjct: 46 MAQRREVMEDGSELRFDHGAPYFTVTNGEVARVVGGWEARGIVAEWKATFACFDLATGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVP MNSICK+LC + GV +KFGV VG+ +WL+D++ WS++ LDG+
Sbjct: 106 TDFEKEGTAKKYVGVPAMNSICKSLCLEDGVVAKFGVTVGKMDWLQDRSSWSLASLDGKD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SP F +TGRPPPLDL+ P L L++IPV PCFALM+AFSEPL
Sbjct: 166 LGYFDYVVATDKNIASPAFSGLTGRPPPLDLSSFPRLPTALQDIPVRPCFALMVAFSEPL 225
Query: 181 SSDPSYQISYLN 192
++ P + S+ N
Sbjct: 226 ATVPVHGFSFNN 237
>gi|226494307|ref|NP_001149840.1| deoxyribodipyrimidine photolyase [Zea mays]
gi|195634973|gb|ACG36955.1| deoxyribodipyrimidine photolyase [Zea mays]
Length = 377
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 143/192 (74%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG+E+ FDHGAP+FTVTN +V +V W + G+VAEWK FD + KF
Sbjct: 46 MAQRREVMEDGSELRFDHGAPYFTVTNGEVARVVGGWXARGIVAEWKATFACFDLATGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVP MNSICK+LC + GV +KFGV VG+ +WL+D++ WS++ LDG+
Sbjct: 106 TDFEKEGTAKKYVGVPAMNSICKSLCLEDGVVAKFGVTVGKMDWLQDRSSWSLASLDGKD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SP F +TGRPPPLDL+ P L L++IPV PCFALM+AFSEPL
Sbjct: 166 LGYFDYVVATDKNIASPAFSGLTGRPPPLDLSSFPRLPTALQDIPVRPCFALMVAFSEPL 225
Query: 181 SSDPSYQISYLN 192
++ P + S+ N
Sbjct: 226 ATVPVHGFSFNN 237
>gi|357115159|ref|XP_003559359.1| PREDICTED: uncharacterized protein LOC100828433 [Brachypodium
distachyon]
Length = 375
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 143/192 (74%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE +DG E+ FDHGAP+FTV++++V +V WE+ GLVAEWK FDR + KF
Sbjct: 44 MAQRREVMDDGTELRFDHGAPYFTVSSDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ ++G KKYVGVPGMNSICK+LC + GV ++FGV VG+ +WL++ + WS++ LDG+
Sbjct: 104 RDFDKEGTTKKYVGVPGMNSICKSLCLEDGVVARFGVTVGKMDWLQNGSSWSLTSLDGKD 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKNV S +F +TGRPPPLDL+ P+L+ ++IPV PCFALMLAFSEPL
Sbjct: 164 LGNFDYVVATDKNVASHKFSGLTGRPPPLDLSVFPNLSTMFQDIPVRPCFALMLAFSEPL 223
Query: 181 SSDPSYQISYLN 192
+ P S+ N
Sbjct: 224 AMVPVQGFSFYN 235
>gi|14718305|gb|AAK72883.1|AC091123_2 hypothetical protein [Oryza sativa Japonica Group]
Length = 347
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 146/192 (76%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 88 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 147
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 148 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 207
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 208 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 267
Query: 181 SSDPSYQISYLN 192
+ P S+ N
Sbjct: 268 TKVPVQGFSFNN 279
>gi|115455739|ref|NP_001051470.1| Os03g0784000 [Oryza sativa Japonica Group]
gi|108711417|gb|ABF99212.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|113549941|dbj|BAF13384.1| Os03g0784000 [Oryza sativa Japonica Group]
Length = 382
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 146/192 (76%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 51 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 110
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 111 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 170
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 171 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 230
Query: 181 SSDPSYQISYLN 192
+ P S+ N
Sbjct: 231 TKVPVQGFSFNN 242
>gi|222625916|gb|EEE60048.1| hypothetical protein OsJ_12845 [Oryza sativa Japonica Group]
Length = 377
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 146/192 (76%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 46 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 106 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 166 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 225
Query: 181 SSDPSYQISYLN 192
+ P S+ N
Sbjct: 226 TKVPVQGFSFNN 237
>gi|218193854|gb|EEC76281.1| hypothetical protein OsI_13783 [Oryza sativa Indica Group]
Length = 377
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 146/192 (76%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 46 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 106 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 166 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 225
Query: 181 SSDPSYQISYLN 192
+ P S+ N
Sbjct: 226 TKVPVQGFSFNN 237
>gi|357451403|ref|XP_003595978.1| hypothetical protein MTR_2g064620 [Medicago truncatula]
gi|355485026|gb|AES66229.1| hypothetical protein MTR_2g064620 [Medicago truncatula]
Length = 289
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 126/157 (80%), Gaps = 7/157 (4%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAPFF+V+ +V LV+EWES GLVAEW+ GSFD + KF
Sbjct: 33 MSQRREKTEDGKELHFDHGAPFFSVSKPEVARLVQEWESRGLVAEWREKFGSFDIQTLKF 92
Query: 61 VNIQQ-------DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSV 113
NI+Q +G++K++VGVPGMNSICKALC++ GVESKFGVG+GR EWL+D+ LWS+
Sbjct: 93 DNIEQVHKYSSYEGLSKRFVGVPGMNSICKALCNESGVESKFGVGIGRVEWLDDEKLWSL 152
Query: 114 SGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLD 150
G+DGQ+LGQF G+VASDKN+VS R DVTGR PPLD
Sbjct: 153 IGVDGQNLGQFKGLVASDKNIVSTRIADVTGRLPPLD 189
>gi|108711418|gb|ABF99213.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|215707008|dbj|BAG93468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 208
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 140/184 (76%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF + +++G
Sbjct: 2 EDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKFTDFEKEGT 61
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+ LG F+ VV
Sbjct: 62 IKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRDLGHFDYVV 121
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQI 188
A+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL+ P
Sbjct: 122 ATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPLTKVPVQGF 181
Query: 189 SYLN 192
S+ N
Sbjct: 182 SFNN 185
>gi|326513914|dbj|BAJ92107.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 107/148 (72%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
RRE +DG + FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF +
Sbjct: 118 RREVMDDGTGLRFDHGAPYFTVSNDEVARVVGGWEARGLVAEWKAMFACFDRETGKFRDF 177
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
++G KKYVGVPGMNSICK+LC + GV KFG+ +G+ +WL+D++ WS++ DG LG
Sbjct: 178 DKEGTMKKYVGVPGMNSICKSLCQEDGVVGKFGITIGKMDWLQDRSSWSLASFDGTDLGS 237
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDL 151
F+ VVA+DKN+ S + +TG+PPPL L
Sbjct: 238 FDFVVATDKNIASRKVSGLTGKPPPLGL 265
>gi|326512438|dbj|BAJ99574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 94/127 (74%)
Query: 66 DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+G KKYVGVPGMNSICK+LC + GV KFG+ +G+ +WL+D++ WS++ DG LG F+
Sbjct: 36 EGTMKKYVGVPGMNSICKSLCQEDGVVGKFGITIGKMDWLQDRSSWSLASFDGTDLGSFD 95
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPS 185
VVA+DKN+ S + +TG+PPPLDL+ P L+ +++IPV PCFALMLAFSEPLS P
Sbjct: 96 FVVATDKNIASRKVSGLTGKPPPLDLSVFPHLSAMIQDIPVRPCFALMLAFSEPLSMVPV 155
Query: 186 YQISYLN 192
S+ N
Sbjct: 156 QGFSFYN 162
>gi|168049602|ref|XP_001777251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671353|gb|EDQ57906.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 112/184 (60%), Gaps = 5/184 (2%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG+E++FDHGA +FTV +V LV +W++ G+VA+W+ G+ + + +F
Sbjct: 31 MSQRREKVEDGSELMFDHGAQYFTVKTAEVQQLVDKWQASGIVADWEGRFGTLNVATGEF 90
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
V +D K+YVGVPGMN+ICKAL PGV++K+G V +W+E + WS+ DG++
Sbjct: 91 V---ED--TKRYVGVPGMNAICKALTTSPGVQAKYGAQVVGLDWVEGLDTWSLKFKDGEN 145
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F VV +DK P + P+ K+ + PCFA+M+AFS PL
Sbjct: 146 LGNFTAVVVADKGAAKLLLGKWLSIPYAVCGAGFPEWHKKVAAVKAAPCFAVMMAFSSPL 205
Query: 181 SSDP 184
+ P
Sbjct: 206 TLIP 209
>gi|223947889|gb|ACN28028.1| unknown [Zea mays]
Length = 266
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 79/103 (76%)
Query: 90 GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149
GV +KFGV VG+ +WL+D++ WS++ LDG+ LG F+ VVA+DKN+ SP F +TGRPPPL
Sbjct: 24 GVVAKFGVTVGKMDWLQDRSSWSLASLDGKDLGYFDYVVATDKNIASPAFSGLTGRPPPL 83
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLN 192
DL+ P L L++IPV PCFALM+AFSEPL++ P + S+ N
Sbjct: 84 DLSSFPRLPTALQDIPVRPCFALMVAFSEPLATVPVHGFSFNN 126
>gi|108711419|gb|ABF99214.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|215695182|dbj|BAG90373.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712265|dbj|BAG94392.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 255
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 89/115 (77%)
Query: 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSP 137
MNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+ LG F+ VVA+DKN+ SP
Sbjct: 1 MNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRDLGHFDYVVATDKNIASP 60
Query: 138 RFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLN 192
RF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL+ P S+ N
Sbjct: 61 RFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPLTKVPVQGFSFNN 115
>gi|406832394|ref|ZP_11091988.1| DNA photolyase FAD-binding protein [Schlesneria paludicola DSM
18645]
Length = 368
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 20/178 (11%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T ++ FDHGA +FTVT+ LV+ W G+ AEW G + V +
Sbjct: 78 RTATRRADPDLEFDHGAQYFTVTDPLFEPLVQSWIERGIAAEWH---GRIVEIDGSIVKV 134
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
+ + K+YVGVPGM ++ + L H ++ + + + + D +W + G++ G
Sbjct: 135 KPP-LPKRYVGVPGMTAMARQLAHDVPIQLQSRI----VQVIRDDRIWRIIDEGGRAYGP 189
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
F+ +V S + S + D+ G P LA+++ IP+NPC+A+M+AF P++
Sbjct: 190 FDDLVVS---LPSTQAADLLGEHP---------LAMEIRAIPMNPCWAVMVAFERPVN 235
>gi|444915214|ref|ZP_21235350.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
gi|444713796|gb|ELW54688.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
Length = 338
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 24/180 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RRE DG+ FDHGA +FT + V W G+ AEW+ G+ D
Sbjct: 53 MSTRRE---DGSS--FDHGAQYFTARDEGFQRQVETWVEQGIAAEWRARFGTLD---NGA 104
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ ++ +G +YVGVPGM+++ +A + V+ + GV V ++ W+++ G++
Sbjct: 105 LTLKDEG-PVRYVGVPGMSALAQAFASR--VDVRCGVRVEHVR--REQEAWALTSETGEA 159
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+ V +P + PL L +P+L+ ++ + + PC+++M +F P+
Sbjct: 160 LGTFHAVVAA---VPAP-------QAVPL-LAGSPELSARVAGVRMEPCWSVMASFDTPV 208
>gi|383457618|ref|YP_005371607.1| FAD dependent oxidoreductase [Corallococcus coralloides DSM 2259]
gi|380730498|gb|AFE06500.1| FAD dependent oxidoreductase [Corallococcus coralloides DSM 2259]
Length = 340
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++E G+ FDHGA +FT ALV W + G+ AEW+ +G+ R + +
Sbjct: 60 RRSAEGGS---FDHGAQYFTAREPLFRALVDAWVADGVAAEWRGRIGTLTRGA-----VT 111
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQ 123
+ +YVGVPGM+++ KAL G++ + GV R E + + L W ++ G+ LG
Sbjct: 112 PAKASVRYVGVPGMSAVAKALAD--GLDVRTGV---RVERVAREGLAWRLTSETGEDLGL 166
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
VVA+ + L AP LA + ++PC+A+M F P++
Sbjct: 167 AEVVVAAVPAPQAVPL-----------LAGAPTLAAQAGTARMSPCWAVMARFDAPVA 213
>gi|325107068|ref|YP_004268136.1| FAD dependent oxidoreductase [Planctomyces brasiliensis DSM 5305]
gi|324967336|gb|ADY58114.1| FAD dependent oxidoreductase [Planctomyces brasiliensis DSM 5305]
Length = 341
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 1 MSQRRETSEDG-NEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKK 59
MS RR E G FDHGA +FT + V++W +VAEWK G F +SK
Sbjct: 42 MSLRRVLPEGGLPSFQFDHGAQYFTARTPEFQKQVQDWLEREVVAEWK---GPFVSLSKG 98
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ 119
V G + +YVG PGMN IC+ L + V G+ V E E+ W +S
Sbjct: 99 TVGPDPGGNDPRYVGTPGMNQICRDLAEEVCVTC--GIRVTGLEKTEEG--WQLSAETSA 154
Query: 120 SL------GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173
+ F+ VV S + +P+ + + P D++F L ++ + PC A M
Sbjct: 155 TKEPLTLDSTFDAVVCS---IPAPQAKTLL----PDDISFQQQLG----DVKIAPCRAAM 203
Query: 174 LAFSEPLSSD 183
+ F E + D
Sbjct: 204 VTFDEKIDVD 213
>gi|449443231|ref|XP_004139383.1| PREDICTED: uncharacterized protein LOC101219713 [Cucumis sativus]
Length = 545
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFTVT+N LV W + LV EWK +G + + +FV + +Y+
Sbjct: 150 LMFDHAAQFFTVTDNQFAQLVDGWLAADLVKEWKGTVGELE-LGGRFVPMSS---CPRYI 205
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
G GM + +L Q + + V R W+ +W +S +G+ G F+ +V
Sbjct: 206 GTNGMRPLADSLLSQTSL-----INVIRPCWISKLEPFNGMWHLSE-NGKPCGHFDAIVI 259
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ + R +G P +A +++ + ++ +AL+ AF +PL
Sbjct: 260 AHNGKCANRLLSTSG---------LPLIARQMKRLELSSIWALLAAFEDPL 301
>gi|449483109|ref|XP_004156495.1| PREDICTED: uncharacterized protein LOC101226129 [Cucumis sativus]
Length = 536
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFTVT+N LV W + LV EWK +G + + +FV + +Y+
Sbjct: 150 LMFDHAAQFFTVTDNQFAQLVDGWLAADLVKEWKGTVGELE-LGGRFVPMSS---CPRYI 205
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
G GM + +L Q + + V R W+ +W +S +G+ G F+ +V
Sbjct: 206 GTNGMRPLADSLLSQTSL-----INVIRPCWISKLEPFNGMWHLSE-NGKPCGHFDAIVI 259
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ + R +G P +A +++ + ++ +AL+ AF +PL
Sbjct: 260 AHNGKCANRLLSTSG---------LPLIARQMKRLELSSIWALLAAFEDPL 301
>gi|296284203|ref|ZP_06862201.1| putative deoxyribodipyrimidine photolyase [Citromicrobium
bathyomarinum JL354]
Length = 300
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR DG FDHGA +FT VR WE+ G+VA W
Sbjct: 30 MATRR-VEHDGATFRFDHGAQYFTAREMAFQTQVRAWEADGIVAPWPA------------ 76
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+DG +VG PGMN +A+ +E +FG + + D+ W V G +G
Sbjct: 77 ---AKDGA---WVGTPGMNVPIRAMAE--ALEVRFGTRIAGL--VPDRGGWRVEG-EGAP 125
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
+F+ VV + P + PL APD A ++ PC+ M+AF
Sbjct: 126 DDRFDAVV-----IAVP-----AEQAAPLLAVHAPDFAEDARDVKTEPCWTAMVAF 171
>gi|283779092|ref|YP_003369847.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
gi|283437545|gb|ADB15987.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
Length = 824
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TSE + FDHGA +FT + V L W G++A W R+ + N+Q
Sbjct: 521 RRTSEG---LAFDHGAQYFTARDERVQRLAESWAEQGIIAPWT------GRIVAREGNVQ 571
Query: 65 QDGMNK--KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
D +YVG P MNS CK L + + R D W + + + G
Sbjct: 572 TDVSKSIARYVGQPTMNSFCKHLATGLTTHLEHTITAAR----RDGEAWWLDFAEHPTQG 627
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ ++ S SP G+ + + AP LA +I + PC+AL++AF P+
Sbjct: 628 PFDWIIGS-----SP-----AGQAAKIFASGAPSLAAAAAKITMTPCWALLVAFDRPVEI 677
Query: 183 DPSYQISYLN 192
D Y +++N
Sbjct: 678 D--YDGAFIN 685
>gi|87306827|ref|ZP_01088973.1| amine oxidase, flavin-containing [Blastopirellula marina DSM 3645]
gi|87290200|gb|EAQ82088.1| amine oxidase, flavin-containing [Blastopirellula marina DSM 3645]
Length = 326
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R ++ ++ FDHGA +FT + V W + G++A WK +G VS N
Sbjct: 37 RMSTRRVEDLHFDHGAQYFTARDPRFQRQVEAWVAAGVIAPWKGAIGVLQSGEVSTPETN 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVE-SKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
+YVGVP MN+ K L V+ S+ V R WS++ G++L
Sbjct: 97 ------PVRYVGVPAMNAPAKRLAAGLNVQLSRRVQTVAR-----SGAGWSLTDESGETL 145
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
G F+ +V + V P + L AP A ++E++ +NPC+A ++ F + L
Sbjct: 146 GPFDALVCT----VPP------AQAADLLCDVAPTYAAQVEQVTLNPCWATLVQFEQRL 194
>gi|428183286|gb|EKX52144.1| hypothetical protein GUITHDRAFT_133871 [Guillardia theta CCMP2712]
Length = 405
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ R+ G + +HGAP F V + + L+ + S G+V E + S D +K
Sbjct: 1 MATRKTREHPG--LAINHGAPLFVVDDPEFTGLMERYVSKGVVKESSAQVYSLDWKTK-- 56
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++Q M KK+V P M S+C++L GV+ ++ V E + W + +
Sbjct: 57 -GMEQVKMAKKFVAQPDMTSLCESLLE--GVQVQYQTQVS--EISKRDGEWVFFDKEKKE 111
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPL-----DLTFAPDLAVKLEEIPVNPCFALMLA 175
+G+F+ V + V R+ V G PPPL + L +L+ + +P MLA
Sbjct: 112 VGRFDWCVVTSHTVGHKRWEQVFGSPPPLQKLSQEFPALNSLVGELQAVRSSPVMVAMLA 171
Query: 176 F 176
+
Sbjct: 172 Y 172
>gi|326493132|dbj|BAJ85027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+DG ++FDH A FFT ++ LV EW GL EW+ +G + F I
Sbjct: 113 DDGRRLVFDHAAQFFTASDRRFQKLVDEWVEKGLAREWRGAIGELE-AGGHFTAIPSS-- 169
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + GQ+
Sbjct: 170 TPRYIGVRGMRPLADAMLPEDDL-----IKVVRPSWISKLEPFNGLWRLFESE-KPQGQY 223
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ VV + + R +G P L +++ + ++ +AL+ AF +PL
Sbjct: 224 DAVVIAHNGKCANRLLSTSG---------LPQLTRQMKRLELSSVWALLAAFDDPL 270
>gi|168008463|ref|XP_001756926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691797|gb|EDQ78157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 22/196 (11%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ R ++DG + FDH A +FTV++ LV W G V EWK +G + K+
Sbjct: 78 MATRDIHTKDGLSLTFDHAAQYFTVSDPKFRKLVDRWIDEGAVKEWKGVVGKL-QAGGKY 136
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKN----LWSVSGL 116
++ D +YVG GM + + + + + V R W+ + + LW ++
Sbjct: 137 SDLADD--VPRYVGTYGMRPLADHMVSRGRL-----IEVKRPVWISNMDAKGPLWHLN-E 188
Query: 117 DGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
+G+ G+F+ VV + + R +G AP++ +++ + ++ +AL+ AF
Sbjct: 189 NGKPHGEFDAVVIAHNGKCANRLLAPSG---------APEVFKQMKRLELSSIWALLAAF 239
Query: 177 SEPLSSDPSYQISYLN 192
EPL + S L+
Sbjct: 240 EEPLPLPEGLESSRLD 255
>gi|85709106|ref|ZP_01040172.1| hypothetical protein NAP1_07685 [Erythrobacter sp. NAP1]
gi|85690640|gb|EAQ30643.1| hypothetical protein NAP1_07685 [Erythrobacter sp. NAP1]
Length = 319
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 77/198 (38%), Gaps = 43/198 (21%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR GN + FDHGA +FT + + +V+EWE G+VA W GS D
Sbjct: 44 MAARRAEIA-GNVVSFDHGAQYFTARDARFVEVVKEWERLGVVARWD-GAGSSD------ 95
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VGVPGMN +AL H V WS
Sbjct: 96 ---------PAFVGVPGMNGPIRALAHPLDVR------------------WSTRAETLTR 128
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDL--TFAPDLAVKLEEIPVNPCFALMLAFSE 178
LG+ V A D++ + D+ PD A + PC+A+M AFS+
Sbjct: 129 LGEEWHVDAGDESFTADTVLVAVPAEQAADILAVTVPDFAKVAASVQSEPCWAVMAAFSQ 188
Query: 179 PLS------SDPSYQISY 190
L D S IS+
Sbjct: 189 KLDVTADSIRDESASISW 206
>gi|329848116|ref|ZP_08263144.1| FAD dependent oxidoreductase family protein [Asticcacaulis
biprosthecum C19]
gi|328843179|gb|EGF92748.1| FAD dependent oxidoreductase family protein [Asticcacaulis
biprosthecum C19]
Length = 318
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RRE DG + FDHGA +FTV + A V WE+ GLVA W
Sbjct: 41 MSTRRE-DRDGRNLFFDHGAQYFTVRDRRFAAQVATWEAQGLVAPWP------------- 86
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
Q G + Y G P M + + GV+ FGV + + D + W + G G+
Sbjct: 87 ----QAG-PQAYTGTPMMCAPLVDMAQAVGVQ--FGVRIDAV--VRDGDGWQLVGEQGR- 136
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
G F+ V+ + + + + D+ P AP+LA PC+ +++ S PL
Sbjct: 137 FGPFDAVIVA---LPAEQAADLLHWP-------APELAATAARQRSQPCWTTLVSLSAPL 186
>gi|395763144|ref|ZP_10443813.1| FAD dependent oxidoreductase [Janthinobacterium lividum PAMC 25724]
Length = 329
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ G+ DHGA +FT + + A V WE G+ +W + L S + +
Sbjct: 42 RMSTRRGDGWQCDHGAQYFTARHPEFRAEVTRWEQAGVAGQWHLQLPS---TAADGASGS 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG-Q 123
D +++VG+P M+SI L + + GV + + + + W + D Q L +
Sbjct: 99 DDTPAQRFVGMPRMSSIASWLAADLPLHT--GVAISALQ--REDSAWRLQAQDAQPLADR 154
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
++ VV + V +P + PL AP+ A + C+A+ML +++PL+
Sbjct: 155 YDAVVLA---VPAP-------QAVPLLRQVAPEQAALAAGTTMAGCWAMMLEYAQPLA 202
>gi|407792088|ref|ZP_11139161.1| FAD dependent oxidoreductase, partial [Gallaecimonas xiamenensis
3-C-1]
gi|407198253|gb|EKE68292.1| FAD dependent oxidoreductase, partial [Gallaecimonas xiamenensis
3-C-1]
Length = 177
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 31/173 (17%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +FT + + + W + G+ AEW V + S+ ++ Q + ++YVG
Sbjct: 11 FDLGAQYFTARHPRFIDELGNWTAQGIAAEWPV--APYHISSRGPIHAQD--VVQRYVGQ 66
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFE------WLEDKNLWSVSGLDGQSLGQFNGVVA 129
P M++I + L ++ +F V + WLED+ DG++ G F+G++
Sbjct: 67 PHMSAITRYLAS--SLDVRFEVSICSCHHRDEQWWLEDQ--------DGKAHGPFDGLLV 116
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V +P+ PL ++ +P LA+ ++ + PC+A+ L FS+PL++
Sbjct: 117 T---VPAPQAA-------PL-VSASPRLAMLTRKVRMEPCWAVGLVFSQPLAT 158
>gi|257453814|ref|ZP_05619092.1| NAD/FAD-dependent oxidoreductase [Enhydrobacter aerosaccus SK60]
gi|257448741|gb|EEV23706.1| NAD/FAD-dependent oxidoreductase [Enhydrobacter aerosaccus SK60]
Length = 344
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDR--VSKKFVN 62
R + FDHG FT +++D V + + G++A W VN + D +S K +
Sbjct: 39 RLATRRAEPFYFDHGVAAFTASDDDFQGFVNQLLAEGVIAVWAVNQATPDNSLISTKPQS 98
Query: 63 IQQ--DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ + D + YVG+P MN+I K L V+ V + N W + G++
Sbjct: 99 MPRVSDCYSDYYVGIPAMNAIGKHLASGLTVQRNTRVA-SIIDHHPIFNSWELLNDKGET 157
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFA-PDLAVK-LEEIPVNPCFALMLAFSE 178
LGQF+ ++++ P +FA L K L + + PC LML F
Sbjct: 158 LGQFDWIISA--------------MPVEQAKSFAQTSLHTKVLNKYALMPCSVLMLGFDT 203
Query: 179 PLSSDPSY 186
PL+ D Y
Sbjct: 204 PLALDYEY 211
>gi|296120560|ref|YP_003628338.1| DNA photolyase FAD-binding protein [Planctomyces limnophilus DSM
3776]
gi|296012900|gb|ADG66139.1| DNA photolyase FAD-binding protein [Planctomyces limnophilus DSM
3776]
Length = 843
Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR E G FDHG + T + +R WES GL+ W+ L + R +
Sbjct: 527 MATRR-LPEGGQ---FDHGCQYITAKSPQFERSLRSWESQGLITPWQ-GLLAAQRTDGSW 581
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +G +YVG+PGM S+ + L G++ V + + E + N W + G
Sbjct: 582 KELAANG--PRYVGLPGMTSMARHLSQ--GLKVHQEVQIQKVERI--ANQWQLQSTQGTV 635
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
G F+ ++ + + + + + G P LA L IP++PC+ +M S+ L
Sbjct: 636 AGPFDQLILA---IPAGQAARLVGEHP---------LAETLARIPMDPCWTVMATLSDRL 683
Query: 181 S 181
+
Sbjct: 684 N 684
>gi|354566242|ref|ZP_08985415.1| amine oxidase [Fischerella sp. JSC-11]
gi|353546750|gb|EHC16198.1| amine oxidase [Fischerella sp. JSC-11]
Length = 327
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 26/185 (14%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + E +FD+GA +FT + ALV W G+V EW +N ++S+K
Sbjct: 46 MATRRIRNSQYGEGIFDYGAQYFTAQDPKFQALVNSWIQEGIVKEWSLN----QQISRKV 101
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
Y GV SI + L V + + F W +D W V
Sbjct: 102 Y----------YRGVNSNRSIAQHLAENLDVHTN--IKAISFAWQDDH--WQV------- 140
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
L N +D +++P + P+ +LEEI +PC AL+ ++P
Sbjct: 141 LTANNETFLADVLILTPPLPQTLELLDRSQIQLPPETRHRLEEIVYHPCIALLALLAQP- 199
Query: 181 SSDPS 185
S PS
Sbjct: 200 SQIPS 204
>gi|410089559|ref|ZP_11286173.1| amine oxidase, flavin-containing protein [Pseudomonas viridiflava
UASWS0038]
gi|409763094|gb|EKN48079.1| amine oxidase, flavin-containing protein [Pseudomonas viridiflava
UASWS0038]
Length = 328
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + V++W++ G VAEW +L +F +
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPSLYNFQNGRLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG PGM++I +A+ + + F + E + W++ +G+S G F
Sbjct: 100 Q----VRWVGKPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + PL L AP LA + + ++P +A+ LAFS PL +
Sbjct: 152 SHVI-----IATP-----APQATPL-LAAAPKLASVVAGVKMDPTWAIALAFSTPLQT 198
>gi|357116570|ref|XP_003560053.1| PREDICTED: uncharacterized protein LOC100824134 [Brachypodium
distachyon]
Length = 477
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+D +++FDH A FFT ++ LV EW GLV EW+ ++G + F I
Sbjct: 120 DDERQLVFDHAAQFFTASDERFQKLVEEWVERGLVREWRGSIGELE-AGGHFRPIHSS-- 176
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + GQ+
Sbjct: 177 TPRYIGVNGMRPLADAMLPENDL-----IKVIRPSWISKLEPFNGLWRLFE-NEKPRGQY 230
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ +V + + R +G P L +++ + ++ +AL+ AF P
Sbjct: 231 DAIVIAHNGKCANRLLSTSG---------LPQLTKQMKRLELSSVWALLAAFEGPF 277
>gi|307110486|gb|EFN58722.1| hypothetical protein CHLNCDRAFT_16675, partial [Chlorella
variabilis]
Length = 406
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
+LFDH +FT T+ +V EW++ G+V W+ +G FV DG ++Y+
Sbjct: 69 LLFDHACQYFTATHPSFQQIVDEWQAAGVVQRWEGPVGRLR--GGSFVP---DGGQERYM 123
Query: 74 GVPGMNSICKALCHQPGVESKFGVG----VGRFEWLEDKNL----WSVSGLDGQSLGQFN 125
GM + + L + E + G G V R +W+ + W ++G G+ G ++
Sbjct: 124 ARGGMRQLAEHLAGRASREQRDGSGGLVEVRRPQWVSEARFTPDGWRLAGC-GRDQGVYD 182
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
VV + + R G P +A +L + + + LM AF P++
Sbjct: 183 AVVIAHNGKCANRLAAPMG---------VPAVAAQLRRLRLAATWVLMAAFRSPVA 229
>gi|224130614|ref|XP_002328333.1| predicted protein [Populus trichocarpa]
gi|222838048|gb|EEE76413.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV++ LV +W GLV +W+ +G + V +F+
Sbjct: 143 DPQPLIFDHAAQFFTVSDPRFSELVDDWLEKGLVRQWQGIIGELE-VGGQFLPFPSS--T 199
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFN 125
+Y+ V GM S+ ++ Q + V V R W+ +W +S +G+ GQF+
Sbjct: 200 PRYISVNGMRSLADSILSQTCM-----VNVVRPCWISKLEPFNGMWHLSE-NGKPCGQFD 253
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+V + + R +G P +A +++ + ++ +AL+ AF +PL
Sbjct: 254 IIVIAHNGKCANRLLASSG---------LPLIARQMKTLGLSSIWALLAAFEDPL 299
>gi|225463946|ref|XP_002268010.1| PREDICTED: uncharacterized protein LOC100241002 [Vitis vinifera]
Length = 467
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV + LV W GLV +W+ +G + V +FV + +
Sbjct: 119 DPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELE-VGGQFVPLPS--LP 175
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFN 125
+Y+GV GM + ++ Q + V V R W+ +W +S +G+ GQ++
Sbjct: 176 PRYIGVNGMRPLADSILSQTTM-----VNVVRPCWISKLDPFNGMWHLS-ENGKPHGQYD 229
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+V + + +G P +A +++++ ++ +AL+ AF +PL
Sbjct: 230 AIVIAHNGKCANHLLASSG---------LPLVARQMKKLELSSIWALLAAFEDPL 275
>gi|341615778|ref|ZP_08702647.1| putative deoxyribodipyrimidine photolyase [Citromicrobium sp.
JLT1363]
Length = 309
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 34/176 (19%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + FDHGA +FT A VR WE G+VA W
Sbjct: 39 MATRR-VEHESETYAFDHGAQYFTARELAFQAQVRAWEGDGIVARWPA------------ 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VG PGMN+ +A+ ++ +FG + L ++ W + G +G
Sbjct: 86 ------AKEDAWVGTPGMNAPIRAMSE--ALDVRFGTRITGL--LAERGGWLLEG-EGVP 134
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
+F+ VV V P + PL T APD A ++ PC+ M+AF
Sbjct: 135 ENRFDTVV-----VAVP-----AEQVAPLLGTHAPDFAEDARDVTSEPCWTAMVAF 180
>gi|296087896|emb|CBI35179.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV + LV W GLV +W+ +G + V +FV + +
Sbjct: 119 DPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELE-VGGQFVPLPS--LP 175
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFN 125
+Y+GV GM + ++ Q + V V R W+ +W +S +G+ GQ++
Sbjct: 176 PRYIGVNGMRPLADSILSQTTM-----VNVVRPCWISKLDPFNGMWHLS-ENGKPHGQYD 229
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+V + + +G P +A +++++ ++ +AL+ AF +PL
Sbjct: 230 AIVIAHNGKCANHLLASSG---------LPLVARQMKKLELSSIWALLAAFEDPL 275
>gi|387129739|ref|YP_006292629.1| putative deoxyribodipyrimidine photolyase [Methylophaga sp. JAM7]
gi|386271028|gb|AFJ01942.1| putative deoxyribodipyrimidine photolyase [Methylophaga sp. JAM7]
Length = 328
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQ-DGMNKKYVG 74
FDHGA FFT + + GL+A+W+ FD + K VN ++ D YVG
Sbjct: 50 FDHGAQFFTAKSASFQQFITPLLRAGLIADWQARFAEFD--AGKMVNARKWDAAFPHYVG 107
Query: 75 VPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNV 134
VP M +I +AL +E + V F +D W + G+ F+ ++ + +
Sbjct: 108 VPAMAAIGEALATDLPIEYNCQI-VSVF---QDDQKWYLVDKTGKISPPFDWLIIA---L 160
Query: 135 VSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQ 187
+ + R++ P +++F D+ +I + PC+ALM++ L+ DP ++
Sbjct: 161 PAEQTRELI----PTEVSFYQDML----QINMLPCYALMVS----LTQDPEFE 201
>gi|221068158|ref|ZP_03544263.1| FAD dependent oxidoreductase [Comamonas testosteroni KF-1]
gi|220713181|gb|EED68549.1| FAD dependent oxidoreductase [Comamonas testosteroni KF-1]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 1 MSQRRETSEDGN-EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKK 59
MS RR S DG+ + DHGA +FT +N + + V WE G W+ +G D
Sbjct: 1 MSTRR--SSDGDMDWQCDHGAQYFTASNTEFRSQVFAWEQAGAAQVWQGRIGKHD--GHD 56
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVG-RFEWLEDKNLWSVSGLDG 118
FV QD +++VG P M S + V + RF+W ++ L
Sbjct: 57 FV--LQDRPLERFVGTPRMTSPAAHM-----VRGMHAISQSVRFQWQA-----TIQPLQP 104
Query: 119 QSLGQFNGVVASDKNVVSP-RFRDVTGRPP-----PLDLTFAPDLAVKLEEIPVNPCFAL 172
+S F ++ S ++ P R++ V P PL AP+ A + PC+AL
Sbjct: 105 RSA--FGWILQSQEHGTEPHRYQAVVLAVPAPQAAPLLAGVAPEAAALASNARMLPCWAL 162
Query: 173 MLAFSEPLS 181
M+ +PLS
Sbjct: 163 MVRCHQPLS 171
>gi|303271275|ref|XP_003054999.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462973|gb|EEH60251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 33/191 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEW-KVNLGSFDRVSKK 59
+S RR DG ++ FDH +FTV + AL +EW + GL+A W +G D S +
Sbjct: 44 LSSRRFRDNDGRDVAFDHSTQYFTVDDPRFEALAKEWAAEGLIAPWPNSAVGVLDATSGR 103
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWL---------EDKNL 110
F + D +++GV G +C+ L G V R +W+ K
Sbjct: 104 FRSF--DDATTRWIGVDGWTPLCEFLAE--GAHE-----VVRPQWVGAMTPVGGDGAKRR 154
Query: 111 WSV-SGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPC 169
W + SG G+ LG F+ V S + L L +LA K ++ ++
Sbjct: 155 WELASGPGGKPLGTFDFVAVSHNGKCA------------LRLAPTAELA-KQRKLILSSV 201
Query: 170 FALMLAFSEPL 180
+ALM PL
Sbjct: 202 WALMFVVDAPL 212
>gi|126727526|ref|ZP_01743359.1| probable deoxyribodipyrimidine photolyase [Rhodobacterales
bacterium HTCC2150]
gi|126703116|gb|EBA02216.1| probable deoxyribodipyrimidine photolyase [Rhodobacterales
bacterium HTCC2150]
Length = 330
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 15 LFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK---K 71
FDHGA FF+ N+ A + + G++ W F + + + I++ N
Sbjct: 48 FFDHGAQFFSAQTNEFKAFIAPMITDGIMNSWNAR---FAEIEGRAI-IRERRWNDDYPH 103
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131
YVGVPGM+SI K L + G+ K G V + + WS++ G SLG+++ V+++
Sbjct: 104 YVGVPGMSSIAKHLSN--GMNLKLGTRVQSIS--KQMSKWSLADDQGHSLGEYDWVISA- 158
Query: 132 KNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
P + P L L P+++ I + CF++ML F + L
Sbjct: 159 ----IPAEQAAGLLPSSLPLY--PEVS----SIKMEGCFSMMLGFDQAL 197
>gi|126726548|ref|ZP_01742389.1| probable deoxyribodipyrimidine photolyase [Rhodobacterales
bacterium HTCC2150]
gi|126704411|gb|EBA03503.1| probable deoxyribodipyrimidine photolyase [Rhodobacteraceae
bacterium HTCC2150]
Length = 330
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 15 LFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK---K 71
FDHGA FF+ N+ A + + G++ W F + + + I++ N
Sbjct: 48 FFDHGAQFFSAQTNEFKAFIAPMITDGIMNSWNAR---FAEIEGRAI-IRERRWNDDYPH 103
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131
YVGVPGM+SI K L + G+ K G V + + WS++ G SLG+++ V+++
Sbjct: 104 YVGVPGMSSIAKHLSN--GMNLKLGTRVQSIS--KQMSKWSLADDQGHSLGEYDWVISA- 158
Query: 132 KNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
P + P L L P+++ I + CF++ML F + L
Sbjct: 159 ----IPAEQAAGLLPSSLPLY--PEVS----SIKMEGCFSMMLGFDQAL 197
>gi|429335275|ref|ZP_19215912.1| hypothetical protein CSV86_25424 [Pseudomonas putida CSV86]
gi|428760077|gb|EKX82354.1| hypothetical protein CSV86_25424 [Pseudomonas putida CSV86]
Length = 328
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + V+ W+ G VAEWK L ++
Sbjct: 40 RMASKRSDAGALDLGAQYFTARDRRFVEQVQHWQDKGWVAEWKPQLYNY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VGVP M++I + L V F + E K+ W + D
Sbjct: 89 RDGQLTPSPDEQTRWVGVPRMSAITRGLLKD--VTVNFSCRIS--EVFRGKHYWHLQDTD 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G S G F+ V+ + V +P + PL L P LA + + + P +A+ L F
Sbjct: 145 GCSHGPFSRVIVA---VPAP-------QATPL-LAATPKLAAVVAGVQMEPTWAIALGFD 193
Query: 178 EPLSS 182
PL +
Sbjct: 194 TPLDT 198
>gi|110679508|ref|YP_682515.1| hypothetical protein RD1_2239 [Roseobacter denitrificans OCh 114]
gi|109455624|gb|ABG31829.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 322
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT +D + G VA W L F ++
Sbjct: 41 RMSTRRADVFQFDHGAQYFTARGDDFQRFLAAHIEQGTVAMWCPRLACFGGQPPQWTA-- 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+YVGVPGMN++CKA+ V + V E W + DG+ G F
Sbjct: 99 -----PRYVGVPGMNALCKAMAGDVEVRHETRV----LELERKDGRWHIGTADGEGFGPF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
+ V +S +P + P +FA L + + C++LML F
Sbjct: 150 DWVFSS-----APAEQSAALLPACFSGSFA------LGQARMLGCYSLMLGF 190
>gi|264678044|ref|YP_003277951.1| hypothetical protein CtCNB1_1909 [Comamonas testosteroni CNB-2]
gi|262208557|gb|ACY32655.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 353
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + D N DHG +FT + D A V WE G VA W +GS+D + F
Sbjct: 50 MSTRRRSDSDANWQC-DHGVQYFTAHDADFRAQVATWEQAGAVASWSARIGSYD--GQSF 106
Query: 61 VNIQQDGMNKKYVGVPGMNSI 81
+ Q +++VG P M S+
Sbjct: 107 --MLQTSAGQRFVGTPRMTSL 125
>gi|254876319|ref|ZP_05249029.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842340|gb|EET20754.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 335
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT + + ++ G++ W+ N + + +N +
Sbjct: 37 RMSTRYADPYYFDHGAQYFTAKSFEFKEFLKPMIDQGIIKNWQANFVEIK--NSEIINQK 94
Query: 65 Q-DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D K YVG P MNS+ + L G++ VG ++ LW V + Q LG
Sbjct: 95 SWDNEYKHYVGSPRMNSVAQYLAQ--GLDISLNTRVGSIT--KEDRLWIVKDDNNQFLGC 150
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
F+ ++ + + S + +D+ P + +F ++ I ++ CF+LML + + ++
Sbjct: 151 FDWIIFA---IPSDQLKDLL----PQNTSFYN----QISSIKMDSCFSLMLGYDKEIN 197
>gi|374333917|ref|YP_005090604.1| flavin containing amine oxidoreductase-like protein [Oceanimonas
sp. GK1]
gi|372983604|gb|AEX99853.1| flavin containing amine oxidoreductase-like protein [Oceanimonas
sp. GK1]
Length = 327
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S ++ +DHGA FFT + AL+ + G V W+ N+ + +S +
Sbjct: 39 RMSSRRRDQQRWDHGAQFFTARSRAFKALLTPFMESGAVVAWQPNITT---LSPNQAPYK 95
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ YV P MNS+ KA+ PG+ V E D+ W + G+ LG+F
Sbjct: 96 RPWFEPHYVAAPAMNSLLKAM--SPGLNIALQTRVQSLEPQGDR--WRLLDDQGEWLGEF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE 178
+ V++S P P P A + PC+ALML +
Sbjct: 152 DWVISS--------------APLPQTRELLPLAADAYAGFGMRPCYALMLTVDD 191
>gi|167627222|ref|YP_001677722.1| NAD/FAD-dependent oxidoreductase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597223|gb|ABZ87221.1| NAD/FAD-dependent oxidoreductase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 348
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT + ++ G++ W+ N + + +N +
Sbjct: 50 RMSTRYADPYYFDHGAQYFTAKFFEFKEFLKPMIDQGIIKNWQANFVEIK--NSEIINQK 107
Query: 65 Q-DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D K YVG P MN++ + L G++ VG ++ LW V + Q LG
Sbjct: 108 SWDNEYKDYVGSPRMNAVAQYLAQ--GLDIYLNTRVGSIT--KEDRLWIVKDDNNQFLGC 163
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
F+ ++ + + S + +D+ PP + +F ++ I ++ CF+LML + + ++
Sbjct: 164 FDWIIFA---IPSDQLKDL----PPQNTSFYNHIS----SIKMDSCFSLMLGYDKEIN 210
>gi|398869854|ref|ZP_10625211.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM74]
gi|398210266|gb|EJM96918.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM74]
Length = 328
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQAKGWVAEWTPQLYTFH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVVIA---TPAPQATAL--------LASAPKLAGAAAGVKMDPTWAVALAFETPLET 198
>gi|440716033|ref|ZP_20896552.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
gi|436438979|gb|ELP32478.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
Length = 837
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 21/196 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTNVGSLHQVGERWKLQIENAGGNS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFA----PDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP T DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQATSLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSDPSYQISYLN 192
E L SD Y +++N
Sbjct: 674 GEGL-SDLGYAGAFIN 688
>gi|395650274|ref|ZP_10438124.1| FAD dependent oxidoreductase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 328
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G +WK L +F K
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQNNGWAEQWKPQLYNF----KAGQLTP 95
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++VG P M++I +AL VE FG + E + K W++ DG + G F
Sbjct: 96 SPDEQIRWVGTPRMSAITRALLDDLPVE--FGCRI--TEVFQGKQHWNLLDADGGNRGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVVIA---TPAPQATAL--------LATAPKLASVAAGVKMDPTWAIALAFDKPLDT 198
>gi|398952320|ref|ZP_10674709.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM33]
gi|398155248|gb|EJM43698.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM33]
Length = 328
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQARGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET 198
>gi|149920769|ref|ZP_01909233.1| probable deoxyribodipyrimidine photolyase [Plesiocystis pacifica
SIR-1]
gi|149818422|gb|EDM77873.1| probable deoxyribodipyrimidine photolyase [Plesiocystis pacifica
SIR-1]
Length = 343
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S DG + FDHGA +FT A+V G +A W+ L + + +
Sbjct: 47 RRASVDGLTLRFDHGAQYFTARTPAFQAVVEAGLEAGSLARWRPRLIAVEGTLAAGRSAV 106
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQ 123
+D +YVGVPGM+++ K L + GV+ R + LE W++ G+
Sbjct: 107 ED-ETPRYVGVPGMSALGKLLAARAGVDEARVHRKRRIQALERGVQGWTLVDEAGERSEG 165
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
F V+ N+ S + PL AP LA + PC+A ML +P
Sbjct: 166 FEAVL---LNLPS-------AQATPLLEAHAPALAERSRACTFEPCWAGMLRPEDP 211
>gi|398889399|ref|ZP_10643242.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM55]
gi|426411465|ref|YP_007031564.1| FAD dependent oxidoreductase [Pseudomonas sp. UW4]
gi|398189521|gb|EJM76795.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM55]
gi|426269682|gb|AFY21759.1| FAD dependent oxidoreductase [Pseudomonas sp. UW4]
Length = 328
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQARGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVVIA---TPAPQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET 198
>gi|28868341|ref|NP_790960.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213967208|ref|ZP_03395357.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. tomato
T1]
gi|301381056|ref|ZP_07229474.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato Max13]
gi|302062195|ref|ZP_07253736.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato K40]
gi|302130075|ref|ZP_07256065.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422659488|ref|ZP_16721913.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|28851578|gb|AAO54655.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213928050|gb|EEB61596.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. tomato
T1]
gi|331018106|gb|EGH98162.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 328
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +GQ+ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDMPVSFSCRI--TEVFRGEEHWNLLDAEGQNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + T L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQAST------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|417302748|ref|ZP_12089836.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
gi|327540991|gb|EGF27547.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
Length = 837
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 21/196 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTTVGSLHQVGERWKLQIENAGGAS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLD----LTFAPDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP L DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQAASLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSDPSYQISYLN 192
E L SD Y +++N
Sbjct: 674 GEGL-SDLGYAGAFIN 688
>gi|395492587|ref|ZP_10424166.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26617]
Length = 309
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 46/186 (24%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR DG+ + FDHGA +FT + A V +W + G+VA W
Sbjct: 39 MATRRVDGPDGD-VSFDHGAQYFTARDPAFGAQVEQWAAAGIVAAWPA------------ 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGV-----GRFEWLEDKNLWSVSG 115
+VG PGMN++ KA+ V +G V G WL
Sbjct: 86 ------AGEDAWVGTPGMNALVKAITDDRDV--TWGAKVDAIRRGDGGWL---------- 127
Query: 116 LDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
LD S +F+ V+ V +P + PL + P +A + P PC+ M+A
Sbjct: 128 LDPVSDTRFDAVI-----VATP-----AEQAGPLLVAHDPAMAAIAQACPSAPCWTAMVA 177
Query: 176 FSEPLS 181
F + ++
Sbjct: 178 FEDRVA 183
>gi|407363806|ref|ZP_11110338.1| oxidoreductase [Pseudomonas mandelii JR-1]
Length = 328
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQSNGWVAEWTPQLYTFH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMEPTWAVALAFDTPLDT 198
>gi|398923154|ref|ZP_10660518.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM48]
gi|398175696|gb|EJM63441.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM48]
Length = 328
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQAKGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVVIA---TPAPQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET 198
>gi|32475803|ref|NP_868797.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH 1]
gi|32446346|emb|CAD76174.1| probable deoxyribodipyrimidine photolyase [Rhodopirellula baltica
SH 1]
Length = 837
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 21/196 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTTVGSLHQVGERWKLQIENAGGNS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLD----LTFAPDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP L DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQAASLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSDPSYQISYLN 192
E L SD Y +++N
Sbjct: 674 GEGL-SDLGYVGAFIN 688
>gi|297828968|ref|XP_002882366.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297328206|gb|EFH58625.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ + LV W GLV EWK +G + +Y+
Sbjct: 142 LIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEVGGSFSQFPSS--SPPRYI 199
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
V GM S+ +L +ES+ V + R W+ +W +S +G GQF+ +V
Sbjct: 200 AVNGMLSLADSLL----LESQM-VNLVRPCWISKLEPLNGMWHLSE-NGTPRGQFDVIVI 253
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ + R +G P +A +++++ ++ +AL+ AF +PL +
Sbjct: 254 AHNGKCANRLLSASG---------LPLVAKQMKKLDLSSIWALLAAFDDPLPT 297
>gi|242086110|ref|XP_002443480.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
gi|241944173|gb|EES17318.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
Length = 507
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ ++V EW GLV EW +G + +F I +
Sbjct: 151 DGGEQLVFDHAAQFFTASDERFQSMVDEWLDRGLVREWSGLVGELE-AGGRFRAIPS--L 207
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 208 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLF-ENEKPHGEY 261
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ +V + + R +G P L +++ + ++ +AL+ AF PL
Sbjct: 262 DAIVIAHNGKCANRLLSTSG---------LPLLTKQMKRLELSSVWALLAAFEAPL 308
>gi|398914028|ref|ZP_10656752.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM49]
gi|398179237|gb|EJM66853.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM49]
Length = 328
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQAKGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVVIA---TPAPQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET 198
>gi|421612943|ref|ZP_16054037.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
gi|408496253|gb|EKK00818.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
Length = 837
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 21/196 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTTVGSLHQVGERWKLQIENAGGAS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLD----LTFAPDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP L DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQAASLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSDPSYQISYLN 192
E L SD Y +++N
Sbjct: 674 GEGL-SDLGYVGAFIN 688
>gi|339504108|ref|YP_004691528.1| flavin containing amine oxidoreductase-like protein [Roseobacter
litoralis Och 149]
gi|338758101|gb|AEI94565.1| flavin containing amine oxidoreductase-like protein [Roseobacter
litoralis Och 149]
Length = 323
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT D + G+V W+ L F ++
Sbjct: 41 RMSTRRADCFQFDHGAQYFTAQGEDFQRFLAPHIERGVVRAWRPRLTCFGGTIPQWTA-- 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+YVG+PGMN++CKA+ +E V E +D W + L G+ LG +
Sbjct: 99 -----PRYVGLPGMNALCKAMASD--IEVLRETRVASLERRDDH--WQLRSLAGEVLGPY 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
+ V +S S P + P LE + C++LML F
Sbjct: 150 DWVFSSAPAEQSAALM-------PACFSHLP----ALEHARMLGCYSLMLGF 190
>gi|18396966|ref|NP_566235.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|6175169|gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana]
gi|15215628|gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana]
gi|28416461|gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis thaliana]
gi|332640593|gb|AEE74114.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 486
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ + LV W GLV EWK +G + +Y+
Sbjct: 142 LIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEIGGSFSQFPSS--SPPRYI 199
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GM S+ +L +ES+ V + R W+ +W +S +G GQF+ +V
Sbjct: 200 AANGMRSLADSLL----LESQM-VNLVRPCWISKLEPLNGMWHLSE-NGTPRGQFDVIVI 253
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ + R +G P +A +++++ ++ +AL+ AF +PL +
Sbjct: 254 AHNGKCANRLLSASG---------LPLVAKQMKKLDLSSIWALLAAFDDPLPT 297
>gi|431800797|ref|YP_007227700.1| FAD dependent oxidoreductase [Pseudomonas putida HB3267]
gi|430791562|gb|AGA71757.1| FAD dependent oxidoreductase [Pseudomonas putida HB3267]
Length = 328
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G A+WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAAQWKPQLYNYRDGELSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P + PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQTPLDT 198
>gi|398866191|ref|ZP_10621691.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM78]
gi|398241528|gb|EJN27178.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM78]
Length = 328
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTKGWVAEWTPQLYTFHGGRLDLSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I ++L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRSLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVVIA---TPAPQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET 198
>gi|339485730|ref|YP_004700258.1| FAD dependent oxidoreductase [Pseudomonas putida S16]
gi|338836573|gb|AEJ11378.1| FAD dependent oxidoreductase [Pseudomonas putida S16]
Length = 328
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G A+WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAAQWKPQLYNYRDGELSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P + PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQTPLDT 198
>gi|344167803|emb|CCA80051.1| putative nad/fad-dependent oxidoreductase [blood disease bacterium
R229]
Length = 333
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G R + + +D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWG--HRTADGLLADTRD-- 104
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+YVG PGM+++ ++L ++ +FG V R + W++ G + Q + VV
Sbjct: 105 ETRYVGQPGMSALVRSLATP--LDVRFGHAVTRVA--QTGKGWTLH-RSGANAAQADMVV 159
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ P D G P L T AP + PC+ALM+ F++PL
Sbjct: 160 LALPAPELPALFDEGGTPATLRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|224008476|ref|XP_002293197.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971323|gb|EED89658.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 440
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 1 MSQRRETSEDGN--EMLFDHGAPF-FTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVS 57
MS R+ ++G + FDHG + F N+ + W G + +W G+
Sbjct: 84 MSTRKVMDDEGGTVKYQFDHGCQYIFPPKTNEFQQELARWRELGWIKQWNGKFGTVRGSG 143
Query: 58 KKFVNI-QQDGM-NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG 115
+ ++ ++G+ +++YVGVP MNSIC+ + Q ++ + + ++W +
Sbjct: 144 ESVYSVVGENGVEDERYVGVPSMNSICENML-QTNIDQSKHISSNS----NNNHVWQLQN 198
Query: 116 L-DGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALML 174
+ + + L F+ +V +D+N +P +D+ R LD F + +E + C +ML
Sbjct: 199 IKNNELLDTFDWLVVTDRNSAAPHRKDL--RSADLDERFRKPINESIESL--KSC-TVML 253
Query: 175 AFSEPL 180
AF + L
Sbjct: 254 AFEKRL 259
>gi|302754734|ref|XP_002960791.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
gi|300171730|gb|EFJ38330.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
Length = 434
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 26/187 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M R DG ++FDH A +FTV + LV +W S G V EW +G +F
Sbjct: 73 MGTRDIVHRDGKRLVFDHAAQYFTVKDPMFQKLVDQWLSEGAVKEWDGVVGMLR--EGEF 130
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLE----DKNLWSVSGL 116
+ + KYV GM + + + + + + W+ D W++
Sbjct: 131 SPLPH---SVKYVATHGMRLLADHMVSKARL-----ITIQHPCWISSMEVDNGTWNLKEN 182
Query: 117 D-GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
D GQ GQF+ VV + + R +G AP +A +++ + ++ +AL+ A
Sbjct: 183 DLGQ--GQFDAVVIAHNGKCANRLLGPSG---------APLVAKQMKRLELSSVWALLAA 231
Query: 176 FSEPLSS 182
F EPL +
Sbjct: 232 FDEPLPA 238
>gi|302804250|ref|XP_002983877.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
gi|300148229|gb|EFJ14889.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
Length = 434
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M R DG ++FDH A +FTV + LV +W S G V EW +G +F
Sbjct: 73 MGTRDIVHRDGKRLVFDHAAQYFTVKDPMFQKLVDQWLSEGAVKEWDGVVGMLR--EGEF 130
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLE----DKNLWSVSGL 116
+ + KYV GM + + + + + + W+ D W++
Sbjct: 131 SPLPH---SVKYVATHGMRLLADHMVSKARL-----ITIQHPCWISSMEVDNGTWNLKEN 182
Query: 117 D-GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
D GQ GQF+ VV + + R +G AP +A +++ + ++ +AL+ A
Sbjct: 183 DLGQ--GQFDAVVIAHNGKCANRLLGPSG---------APLVAKQMKRLELSSVWALLAA 231
Query: 176 FSEPL 180
F EPL
Sbjct: 232 FDEPL 236
>gi|344173737|emb|CCA88910.1| putative nad/fad-dependent oxidoreductase [Ralstonia syzygii R24]
Length = 333
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 69/172 (40%), Gaps = 17/172 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G R S +D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWG--HRTSNGLQADTRD-- 104
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+YVG PGM+++ ++L ++ +FG V R + W++ G Q + VV
Sbjct: 105 ETRYVGQPGMSALVRSLATP--LDVRFGHAVTRVA--QTGKGWTLH-RSGADAAQADMVV 159
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ P D G P L T AP + PC+ALM+ F++PL
Sbjct: 160 LALPAPELPALFDEGGAPAALRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|398876031|ref|ZP_10631191.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM67]
gi|398205323|gb|EJM92107.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM67]
Length = 328
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQAKGWVAEWAPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVIVA---TPAPQATAL--------LASAPKLAGAAAGVKMDPTWAVALAFDTPLDT 198
>gi|300692454|ref|YP_003753449.1| nad/fad-dependent oxidoreductase [Ralstonia solanacearum PSI07]
gi|299079514|emb|CBJ52192.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
PSI07]
Length = 333
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM+++ ++L ++ +FG V R + W++ G + Q + V
Sbjct: 104 DETRYVGQPGMSALVRSLATP--LDVRFGHAVTRVA--QTGKGWTLH-RSGANAAQADMV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V + P D G P L T AP + PC+ALM+ F++PL
Sbjct: 159 VLALPAPELPALFDEGGTPATLRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|386334512|ref|YP_006030683.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
Po82]
gi|334196962|gb|AEG70147.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
Po82]
Length = 333
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V + P D G P L T AP + PC+ALM+ F++PL
Sbjct: 159 VLALPAPELPALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|325273232|ref|ZP_08139514.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas sp.
TJI-51]
gi|324101638|gb|EGB99202.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas sp.
TJI-51]
Length = 328
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ + +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAEQWKPQLYNYRDGTLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V F + E K W + DG S G F
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFDCRIA--EVFRGKQYWHLQDTDGCSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P + PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT 198
>gi|421900024|ref|ZP_16330387.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
MolK2]
gi|206591230|emb|CAQ56842.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
MolK2]
Length = 333
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V + P D G P L T AP + PC+ALM+ F++PL
Sbjct: 159 VLALPAPELPALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|398882410|ref|ZP_10637378.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM60]
gi|398198952|gb|EJM85902.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM60]
Length = 328
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQAKGWVAEWAPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
VV + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 GHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAVALAFETPLDT 198
>gi|393722350|ref|ZP_10342277.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26605]
Length = 311
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR S G+ + FDHGA FFT + A V W ++K
Sbjct: 39 MATRRVASPCGD-VAFDHGAQFFTARDPHFAAAVTGW------------------AARKI 79
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
V + +VG P MN + KAL VE V R W LD S
Sbjct: 80 VTPWPSAGDDAWVGTPAMNVVVKALAEPLAVEWNAHVDALR----RSDGSWF---LDSVS 132
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
F+ V+ V +P + PL + P +A + P PC+ M+AF E +
Sbjct: 133 DKSFDAVI-----VATP-----AEQAGPLLVAHEPAMAAMAQACPSAPCWTAMVAFGERI 182
Query: 181 S 181
+
Sbjct: 183 A 183
>gi|397603862|gb|EJK58545.1| hypothetical protein THAOC_21317 [Thalassiosira oceanica]
Length = 442
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 17/177 (9%)
Query: 6 ETSEDGNEMLFDHGAPFFTVTNNDVLA-LVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
+ + D N FDHGA F D + W G V EW N S + + +
Sbjct: 126 KVTRDLNRYQFDHGAQFIGRPKTDSFRRALNSWMKDGFVGEWTGNFASVEGSA-----LL 180
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQ 123
+ ++YVG+P +SIC+ L H ++ V R + W + G + LG
Sbjct: 181 ETEPKERYVGIPRFSSICRNLLHHKNIKV---VTQTRALARNSEIGWEIIHGKSKKELGS 237
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
F+ +VASD+N + D L+ + L+ I M+ F PL
Sbjct: 238 FDWLVASDRNSGARHRND-------LNDAKVDEFNSSLKNIKSVKSLVAMIVFERPL 287
>gi|333899137|ref|YP_004473010.1| amine oxidase [Pseudomonas fulva 12-X]
gi|333114402|gb|AEF20916.1| amine oxidase [Pseudomonas fulva 12-X]
Length = 330
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + A V +W++ G V W NL + + ++
Sbjct: 42 RMASKRSDAGALDLGAQYFTARDRRFAATVAQWQARGWVEPWTPNLYQY---ANGVLSPS 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +A+ + KF + E + W + +G+S G F
Sbjct: 99 AD-EQVRWVGNPRMSAITRAMLG--ALPVKFSCRI--TEVFRGEQHWHLLDAEGESHGPF 153
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
V+ + +P+ + L AP LA + + + P +A+ LAF+EPL +
Sbjct: 154 AQVIIATP---APQASAL--------LATAPKLAGTVAGVTMEPTWAVALAFAEPLQT 200
>gi|104780108|ref|YP_606606.1| hypothetical protein PSEEN0884 [Pseudomonas entomophila L48]
gi|95109095|emb|CAK13792.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 328
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G A+WK L ++ +
Sbjct: 40 RMASKRSEVGALDLGAQYFTARDRRFVEQVQQWVAAGWAAQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G F
Sbjct: 100 Q----IRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P + PL L P LA + + P +A+ L F PL +
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAIALGFETPLET 198
>gi|404252978|ref|ZP_10956946.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26621]
Length = 309
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 36/181 (19%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR DG+ + FDHGA +FT + A V +W + G+VA W
Sbjct: 39 MATRRVDGPDGD-VSFDHGAQYFTARDPAFGAQVEQWAAAGIVAAWPA------------ 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VG PGMN++ KA+ ++ +G V ++ L L S
Sbjct: 86 ------AGEDAWVGTPGMNALVKAITVD--LDVTWGSKVDAIRHVDGGWL-----LGPVS 132
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+F+ V+ V +P + PL + P +A + P PC+ M+AF + +
Sbjct: 133 DTRFDAVI-----VATP-----AEQAGPLLVAHDPAMAAIAQACPSAPCWTAMVAFEDRV 182
Query: 181 S 181
+
Sbjct: 183 A 183
>gi|255580905|ref|XP_002531271.1| conserved hypothetical protein [Ricinus communis]
gi|223529104|gb|EEF31084.1| conserved hypothetical protein [Ricinus communis]
Length = 467
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV++ LV W GL+ +W+ +G +++ G +
Sbjct: 136 DPQPLVFDHAAQFFTVSDPQFAQLVDGWLEKGLIRQWQGTIG----------ELEKGGHS 185
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
Y G L VE + R E +W +S +G+ GQF+ +V
Sbjct: 186 LTYSGC---------LLQTSMVEVVRPCWISRLEPF--NGMWHLS-ENGKPCGQFDVIVI 233
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ + R +G P +A +++++ ++P +AL+ AF EPL
Sbjct: 234 AHNGKCANRLLASSG---------LPLIARQMKKLDLSPIWALLAAFEEPL 275
>gi|148546016|ref|YP_001266118.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
F1]
gi|148510074|gb|ABQ76934.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
F1]
Length = 328
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P+ PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT 198
>gi|395447163|ref|YP_006387416.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
ND6]
gi|397693742|ref|YP_006531622.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
DOT-T1E]
gi|388561160|gb|AFK70301.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
ND6]
gi|397330472|gb|AFO46831.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
DOT-T1E]
Length = 328
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P+ PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT 198
>gi|254447004|ref|ZP_05060471.1| amine oxidase, flavin-containing [gamma proteobacterium HTCC5015]
gi|198263143|gb|EDY87421.1| amine oxidase, flavin-containing [gamma proteobacterium HTCC5015]
Length = 329
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TS +E D GA +FT T+++ +A + WE LV W L + +
Sbjct: 41 RMTSIVFDEFQCDLGAQYFTATSDEFVAHMETWEDEWLVDRWHGWLVELENGQA----MT 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+D ++VG PGM++I + L V + GV + E W + +G G F
Sbjct: 97 RDDEVVRFVGRPGMDAIVEKLGELCSV--RCGVAIQTME--RSGKQWYLLDAEGHRHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ V+++ V L +P LA++ + V P + ++L +SEPL+
Sbjct: 153 DAVISA-----------VPAPAARRLLAASPKLAIEAGSVEVQPNWIVVLGYSEPLN 198
>gi|167031798|ref|YP_001667029.1| FAD dependent oxidoreductase [Pseudomonas putida GB-1]
gi|166858286|gb|ABY96693.1| FAD dependent oxidoreductase [Pseudomonas putida GB-1]
Length = 328
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P + PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQSPLDT 198
>gi|398942253|ref|ZP_10670191.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp.
GM41(2012)]
gi|398160805|gb|EJM49060.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp.
GM41(2012)]
Length = 328
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+ G VAEW L ++ +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQGNGWVAEWMPQLYTYHGGQLSLSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVIIATP---APQATAL--------LATAPKLAGAAAGVKMDPTWAVALAFETPLDT 198
>gi|421524609|ref|ZP_15971230.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
LS46]
gi|402751072|gb|EJX11585.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
LS46]
Length = 328
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKDATV--NFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P+ PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT 198
>gi|26987478|ref|NP_742903.1| hypothetical protein PP_0742 [Pseudomonas putida KT2440]
gi|386010402|ref|YP_005928679.1| hypothetical protein PPUBIRD1_0788 [Pseudomonas putida BIRD-1]
gi|24982143|gb|AAN66367.1|AE016265_1 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|313497108|gb|ADR58474.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 328
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P+ PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFETPLDT 198
>gi|108862915|gb|ABG22072.1| expressed protein [Oryza sativa Japonica Group]
Length = 456
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 104 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 161
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 162 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 215
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ + R +G P L +++ + ++ +AL+ AF +PL
Sbjct: 216 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL 257
>gi|447915123|ref|YP_007395691.1| hypothetical protein H045_00595 [Pseudomonas poae RE*1-1-14]
gi|445198986|gb|AGE24195.1| hypothetical protein H045_00595 [Pseudomonas poae RE*1-1-14]
Length = 328
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V FG + + + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPV--TFGCRITDV--FQGEQHWNLLDADGGNHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P+ + L AP L + ++P +A+ LAF +PL +
Sbjct: 152 SHVIIA---TPAPQATAL--------LAAAPKLVSAAAGVKMDPTWAIALAFDKPLDT 198
>gi|378952812|ref|YP_005210300.1| FAD dependent oxidoreductase [Pseudomonas fluorescens F113]
gi|359762826|gb|AEV64905.1| FAD dependent oxidoreductase [Pseudomonas fluorescens F113]
Length = 328
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWNPQLYNFQNGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLDK--LQVQFACRI--TEVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFA-PDLAVKLEEIPVNPCFALMLAFSEPLSS 182
VV + T P L A P LA + ++P +A+ LAF PL +
Sbjct: 152 GQVVIA------------TPAPQATALLAAVPKLAAVAAGVKMDPTWAVALAFEAPLDT 198
>gi|330811709|ref|YP_004356171.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379817|gb|AEA71167.1| Putative oxidoreductase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 328
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTNGWAAEWNPQLYNFQNGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLDK--LQVQFSCRI--TEVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFA-PDLAVKLEEIPVNPCFALMLAFSEPLSS 182
VV + T P L A P LA + ++P +A+ LAF PL +
Sbjct: 152 GQVVIA------------TPAPQATALLAAVPKLAAVAAGVKMDPTWAVALAFETPLDT 198
>gi|170723608|ref|YP_001751296.1| hypothetical protein PputW619_4447 [Pseudomonas putida W619]
gi|169761611|gb|ACA74927.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 328
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + + V FG + E K W + +G S G F
Sbjct: 100 Q----TRWVGVPRMSAITRGMLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P + PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVVMEPTWAVALAFQTPLDT 198
>gi|423699264|ref|ZP_17673754.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q8r1-96]
gi|387996823|gb|EIK58153.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q8r1-96]
Length = 328
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTNGWAAEWNPQLYNFQNGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLDK--LQVQFSCRI--TEVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFA-PDLAVKLEEIPVNPCFALMLAFSEPLSS 182
VV + T P L A P LA + ++P +A+ LAF PL +
Sbjct: 152 GQVVIA------------TPAPQATALLAAVPKLAAVAAGVKMDPTWAVALAFETPLDT 198
>gi|115489414|ref|NP_001067194.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|77556443|gb|ABA99239.1| expressed protein [Oryza sativa Japonica Group]
gi|113649701|dbj|BAF30213.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|215701342|dbj|BAG92766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 497
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 202
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 203 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 256
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQIS 189
+ + R +G P L +++ + ++ +AL+ AF +PL P Q
Sbjct: 257 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL---PIPQTD 304
Query: 190 YLNVLKGLYM 199
+G ++
Sbjct: 305 SYGTFEGAFV 314
>gi|125537277|gb|EAY83765.1| hypothetical protein OsI_38983 [Oryza sativa Indica Group]
Length = 497
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 202
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 203 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 256
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQIS 189
+ + R +G P L +++ + ++ +AL+ AF +PL P Q
Sbjct: 257 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL---PIPQTD 304
Query: 190 YLNVLKGLYM 199
+G ++
Sbjct: 305 SYGTFEGAFV 314
>gi|222617407|gb|EEE53539.1| hypothetical protein OsJ_36748 [Oryza sativa Japonica Group]
Length = 481
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 129 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 186
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 187 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 240
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQIS 189
+ + R +G P L +++ + ++ +AL+ AF +PL P Q
Sbjct: 241 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL---PIPQTD 288
Query: 190 YLNVLKGLYM 199
+G ++
Sbjct: 289 SYGTFEGAFV 298
>gi|387825265|ref|YP_005824736.1| hypothetical protein FN3523_1682 [Francisella cf. novicida 3523]
gi|332184731|gb|AEE26985.1| hypothetical protein FN3523_1682 [Francisella cf. novicida 3523]
Length = 327
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHG +FT + ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGTQYFTAKSEQFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKL- 96
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
D + YVG P MN++ + L V +G L+ N W V+ + L
Sbjct: 97 ---WDNQFEHYVGTPKMNAVAQYLAQDLQVH--LNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I +N CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLSELL----PQNISFYD----QISSIKMNGCFSLMLGYDKSIN 198
>gi|315500506|ref|YP_004089308.1| amine oxidase [Asticcacaulis excentricus CB 48]
gi|315418518|gb|ADU15157.1| amine oxidase [Asticcacaulis excentricus CB 48]
Length = 314
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 34/178 (19%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RRE +D LFDHGA +FTV + ++ V W GL A W
Sbjct: 41 MSTRRERIDDAT-YLFDHGAQYFTVRDPRFVSQVDAWTHEGLAARWP------------- 86
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
D +VG P M S ALC GV +F + + W ++ + ++
Sbjct: 87 -----DAGPDAFVGTPMMCSPLAALCEPFGV--RFATRIEGI--IGAPGAWHLTA-ENET 136
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE 178
G + V+ V P + + L ++APD A + PC+ M++F E
Sbjct: 137 FGPYAQVI-----VAIPSEQAAS-----LLASWAPDFAQLALKNVSQPCWTTMVSFEE 184
>gi|428178524|gb|EKX47399.1| hypothetical protein GUITHDRAFT_106844 [Guillardia theta CCMP2712]
Length = 426
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DH FFT T+ ALV EWE G+V EWK +G D+ S F + +K +VGV
Sbjct: 51 DHSTQFFTATDPKFTALVEEWEKNGVVQEWKGPVGVLDKGS--FTGLAAS--SKLWVGVG 106
Query: 77 GMNSICKALCHQPGVE 92
G+++I + L VE
Sbjct: 107 GIDAIARHLSKSLRVE 122
>gi|449136587|ref|ZP_21771963.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
gi|448884760|gb|EMB15236.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
Length = 837
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 MATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKAL 85
+++ +YVGVPGMN+I K L
Sbjct: 565 --VEEKCGTPRYVGVPGMNAIGKHL 587
>gi|337754616|ref|YP_004647127.1| amine oxidase [Francisella sp. TX077308]
gi|336446221|gb|AEI35527.1| Amine oxidase, flavin-containing [Francisella sp. TX077308]
Length = 226
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT + + ++ G++ W+ N + + +N +
Sbjct: 37 RMSTRYADPYYFDHGAQYFTAKSLEFKEFLKPMIDQGIIKNWQANFVEIK--NSEIINQK 94
Query: 65 QDGMN-KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
G K YVG P MN++ + L + V ++ LW V + Q LG
Sbjct: 95 PWGNEYKHYVGSPKMNAVAQYLAQDLDISLNTRVS----SITKEDRLWIVKDNNNQFLGY 150
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
F+ ++ + + S + +D+ P + +F ++ I ++ CF+LML + + ++
Sbjct: 151 FDWIIFA---IPSDQLKDLL----PQNTSFYN----QISSIKMDSCFSLMLGYDKKIN 197
>gi|254374992|ref|ZP_04990472.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151572710|gb|EDN38364.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 333
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + + ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTNFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + Y+G+P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYEP----YIGIPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I +N CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYE----QISSIKMNGCFSLMLGYDKSIN 198
>gi|386855570|ref|YP_006259747.1| putative nad/fad-dependent oxidoreductase [Deinococcus gobiensis
I-0]
gi|379999099|gb|AFD24289.1| putative nad/fad-dependent oxidoreductase oxidoreductase protein
[Deinococcus gobiensis I-0]
Length = 334
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 18/182 (9%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
+ RR + G E DHGA FFT + +L R E+ G + W +++ +
Sbjct: 41 ATRRVRLDRGREARLDHGARFFTARGERLRSLARAGEAAGWLRAWATGFPTWE---AGEI 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
+ G + +Y V G++++ + L G++ +GV R E W V DG
Sbjct: 98 RVDGGGEHPRYAPVDGLSALGRHLGE--GLDVAYGVTAARLE--RGGAGWRVHD-DGGGT 152
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ +V N+ + + + G AP+L L + +PC+A+ + L+
Sbjct: 153 HEARRLV---LNLPAAQASALLG-------EHAPELRAALSGVTYDPCWAVGAVLEQDLA 202
Query: 182 SD 183
+D
Sbjct: 203 AD 204
>gi|300705105|ref|YP_003746708.1| nad/fad-dependent oxidoreductase [Ralstonia solanacearum CFBP2957]
gi|299072769|emb|CBJ44124.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
CFBP2957]
Length = 333
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 19/173 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ + G V R + W++ +G Q + V
Sbjct: 104 DETRYVGQPGMGALVRSLAAP--LDVRLGHAVTRVA--QAGTGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V + P D G P L T AP + PC+ALM+ F++PL
Sbjct: 159 VLALPAPELPALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|418292120|ref|ZP_12904070.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379063553|gb|EHY76296.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 346
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL-GSFDRVSKKFVNI 63
R S+ + D GA +FT+ + V +W++ G V +W L S D K +
Sbjct: 59 RMASKRSDAGSLDLGAQYFTMRDRRFTETVHQWQAEGWVGQWTPTLFQSRDGQLKPSADE 118
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
Q ++VG P M++I + L + V + E + W++ G S G
Sbjct: 119 Q-----LRWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQFWTLVDATGASHGP 169
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ VV + V +P+ + L+ AP LA + + P +A+ L F+ PLS+
Sbjct: 170 FSQVVIA---VPAPQAAAL--------LSSAPKLAAVAASVAMEPTWAVALGFATPLST 217
>gi|194324366|ref|ZP_03058139.1| hypothetical protein FTE_0133 [Francisella novicida FTE]
gi|194321431|gb|EDX18916.1| hypothetical protein FTE_0133 [Francisella tularensis subsp.
novicida FTE]
Length = 332
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 42 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 101
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 102 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 153
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 154 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 202
>gi|385793594|ref|YP_005826570.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678919|gb|AEE88048.1| Deoxyribodipyrimidine photolyase, type II [Francisella cf. novicida
Fx1]
Length = 328
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 198
>gi|118498184|ref|YP_899234.1| NAD/FAD-dependent oxidoreductase [Francisella novicida U112]
gi|118424090|gb|ABK90480.1| predicted NAD/FAD-dependent oxidoreductase [Francisella novicida
U112]
Length = 328
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 198
>gi|208780210|ref|ZP_03247552.1| hypothetical protein FTG_0352 [Francisella novicida FTG]
gi|208743859|gb|EDZ90161.1| hypothetical protein FTG_0352 [Francisella novicida FTG]
Length = 328
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 198
>gi|332187717|ref|ZP_08389452.1| hypothetical protein SUS17_2783 [Sphingomonas sp. S17]
gi|332012283|gb|EGI54353.1| hypothetical protein SUS17_2783 [Sphingomonas sp. S17]
Length = 309
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 33/177 (18%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
+ S G++ FD+GA + T + LA V +WE G++A W
Sbjct: 44 KSLSAGGHDFAFDYGAQYLTARDPAFLAQVTDWEGAGIIARWPA---------------- 87
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+VGVP M +I + + V ++ + E D W + +G+ G F
Sbjct: 88 --AGEDAWVGVPSMAAIVAHMAEKQDV--RWSTHIRAVE--RDAAGWILIDDEGRE-GPF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ +V + P + PPL + P LA + P PC+ +ML F L+
Sbjct: 141 DALV-----LAIP-----AEQVPPLIASHDPSLAERAMACPSGPCWTVMLGFETRLA 187
>gi|357451407|ref|XP_003595980.1| hypothetical protein MTR_2g064640 [Medicago truncatula]
gi|355485028|gb|AES66231.1| hypothetical protein MTR_2g064640 [Medicago truncatula]
Length = 237
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDP--SYQISYLNVLKGLY 198
DL P+L+ KL +PV PCFA+MLAF+EPLS+ P + I VL Y
Sbjct: 60 DLKLLPELSEKLHNLPVRPCFAVMLAFAEPLSTIPVKGFSIKNSKVLSWAY 110
>gi|325926986|ref|ZP_08188261.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas perforans
91-118]
gi|325542645|gb|EGD14112.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas perforans
91-118]
Length = 344
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 20/177 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + Q M +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD--GTQLRRSQHALM--RYVGVP 120
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W +S + F+ V+ + V +
Sbjct: 121 EMTAPARTLAAQLDVRLSAEVRALR----RSRQGWRLSVSQAAAEHLFDTVLLA---VPA 173
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLNV 193
P + + P T A E++ + P +A+M F P+ DP Y ++N
Sbjct: 174 PSAAGLLAQAAPALATIA-------EQVRMQPAWAVMAHFDAPI--DPGYDALFVNA 221
>gi|398848331|ref|ZP_10605152.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM84]
gi|398248771|gb|EJN34172.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM84]
Length = 328
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V+ W G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQHWVEAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + V +P + PL L P LA + + P +A+ LAF PL +
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVVMEPTWAVALAFQTPLDT 198
>gi|17545252|ref|NP_518654.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427543|emb|CAD14061.1| probable nad/fad-dependent oxidoreductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 343
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R E FDHGA F V V GLV W G + +Q
Sbjct: 55 RVLPEGAPTHAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQ 109
Query: 65 QDGMNK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D ++ +YVG PGM+++ ++L ++ + G V R W++ DG Q
Sbjct: 110 ADTRDEARYVGQPGMSALVRSLATP--LDVRLGHAVTRVA--HAGKGWTLH-RDGADAAQ 164
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ VV + P D G P L AP + PC+ALM+ F++PL
Sbjct: 165 ADLVVLALPAPELPALFDDGGAPATLRDAIAP--------VRYAPCWALMMGFAQPL 213
>gi|423097273|ref|ZP_17085069.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q2-87]
gi|397888140|gb|EJL04623.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q2-87]
Length = 328
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWNPQLYNFQGGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLGK--LQVQFSCRI--TEVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
VV + +P+ + L P LA + ++P +A+ LAF +PL +
Sbjct: 152 GQVVIATP---APQATAL--------LAAVPKLAGVAAGVKMDPTWAVALAFEQPLDT 198
>gi|398860977|ref|ZP_10616618.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM79]
gi|398233996|gb|EJN19892.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM79]
Length = 328
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VA W L +F + +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTNGWVAVWTPQLYTFHGGQLRPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVVIATP---APQATAL--------LATAPKLAGAAAGVKMEPTWAVALAFDTPLET 198
>gi|289670313|ref|ZP_06491388.1| hypothetical protein XcampmN_17966 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 330
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G+ DHGA +FT + A+V W G+ A W+ + S+D
Sbjct: 45 GDHWQCDHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGAQLS----HSHSALT 100
Query: 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130
+YVGVP M + +AL ++ + V + WSVS + F+ V+ +
Sbjct: 101 RYVGVPDMAAPARALAVH--LDIRLSTEVHALQ--RSGQGWSVSCAQDTAAHMFDAVLLA 156
Query: 131 DKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISY 190
V +P + PP+ AP + + P +A++ F P+ DP Y +
Sbjct: 157 ---VPTPNAAKLF---PPI----APAFSSIAPHAQMQPAWAVIAHFDGPV--DPGYDALF 204
Query: 191 LN 192
+N
Sbjct: 205 VN 206
>gi|337279143|ref|YP_004618615.1| hypothetical protein Rta_15050 [Ramlibacter tataouinensis TTB310]
gi|334730220|gb|AEG92596.1| conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 345
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 21/183 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNND---VLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
R S D FDHGA +FTV + LAL S L W N +
Sbjct: 40 RMASRDTPFGRFDHGAQYFTVRDERFARALAL-----SPQLCRPWSANAVRVLDAHGRMA 94
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL----WSV--SG 115
+ +V VPGM+++ + QP ++ V R +E +L W + G
Sbjct: 95 EASLPAPERHWVPVPGMDALARHWA-QPLAQAGRTVLETRVARIERDSLDGRRWQLRTEG 153
Query: 116 LDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
+DG S F+G A V S + D+ + AP A +L ++ V PC+ LMLA
Sbjct: 154 MDG-SARVFSGFDAVMVAVPSRQAMDLL-----RESALAPAFAERLAQVEVAPCWTLMLA 207
Query: 176 FSE 178
F +
Sbjct: 208 FPQ 210
>gi|346724228|ref|YP_004850897.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346648975|gb|AEO41599.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 344
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTQLR----RSQSALMRYVGVP 120
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W +S + F+ V+ + V +
Sbjct: 121 EMTAPARTLAAQLDVRLSAEVRALR----RSRQGWRLSVSQAAAEHLFDTVLLA---VPA 173
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLNV 193
P + + P T A E++ + P +A+M F P+ DP Y ++N
Sbjct: 174 PSAAGLLAQAAPALATIA-------EQVRMQPAWAVMAHFDAPI--DPGYDALFVNA 221
>gi|421889301|ref|ZP_16320345.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
K60-1]
gi|378965341|emb|CCF97093.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
K60-1]
Length = 333
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 19/173 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R + W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRVA--QAGTGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V + P G P L T AP + PC+ALM+ F++PL
Sbjct: 159 VLALPAPELPALFGEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|383767232|ref|YP_005446213.1| putative oxidoreductase [Phycisphaera mikurensis NBRC 102666]
gi|381387500|dbj|BAM04316.1| putative oxidoreductase [Phycisphaera mikurensis NBRC 102666]
Length = 391
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 72/199 (36%), Gaps = 27/199 (13%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL------GSFDRVS 57
R T + FDHG+P FT + V W G+V W G D+ +
Sbjct: 51 RASTRRSRTGVAFDHGSPCFTAHSEAFAERVAGWREAGVVGPWTGRFLRADPGGERDQAA 110
Query: 58 KKFVNIQQDG--------MNKKYVGVPGMNSICKAL---CHQPGVESKFGVGVGRFEWLE 106
DG +++VGVP M ++ L + ES+ +G
Sbjct: 111 AAGDPAVADGPAVRWRPDPRERFVGVPSMAALVGHLLEGAAEAHAESEIVELLGEPAGRG 170
Query: 107 DKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPV 166
W + GQ G F+ VV + + R + AP LA E
Sbjct: 171 SAGPWLLKDAAGQEHGPFDAVVVAVAAPQAARLLGAS----------APRLARLAERAKA 220
Query: 167 NPCFALMLAFSEPLSSDPS 185
CF++MLAF EPL P+
Sbjct: 221 AGCFSVMLAFDEPLGLAPA 239
>gi|254244451|ref|ZP_04937773.1| hypothetical protein PA2G_05309 [Pseudomonas aeruginosa 2192]
gi|126197829|gb|EAZ61892.1| hypothetical protein PA2G_05309 [Pseudomonas aeruginosa 2192]
Length = 327
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSS 182
E L +
Sbjct: 194 EVLDT 198
>gi|83746114|ref|ZP_00943169.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Ralstonia solanacearum UW551]
gi|83727297|gb|EAP74420.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Ralstonia solanacearum UW551]
Length = 333
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V + D G P L T AP + PC+ALM+ F++PL
Sbjct: 159 VLALPAPELSALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPL 203
>gi|145589835|ref|YP_001156432.1| FAD dependent oxidoreductase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048241|gb|ABP34868.1| FAD dependent oxidoreductase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 333
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + + DHGA +FT + + V+EW + + A W L F N
Sbjct: 46 RMSTRNNDHWSGDHGAQYFTARDPLFINQVKEWINAEVAAIWNPRLKVFK------ANQW 99
Query: 65 QD--GMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD-GQSL 121
QD +YVG+P MNS K L +E F + R + ++K W + L+ G
Sbjct: 100 QDSTATENRYVGIPAMNSPGKHLAKALPIE--FNQTIDRVAYAQNK--WQLHSLESGDIH 155
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVN--PCFALMLAFSEP 179
QF+ +V V P P L LT + D +++ I N C+ +M +F++
Sbjct: 156 QQFDWLV-----VALP-------APQALALTKSIDKSIEKFTIDANMQGCWTVMASFTDN 203
Query: 180 LS 181
L+
Sbjct: 204 LN 205
>gi|254432493|ref|ZP_05046196.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197626946|gb|EDY39505.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 391
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
S RR +++ E+ DHGAP +T + AL+ +GG +A W + + SK +
Sbjct: 33 STRRSRADE--ELAIDHGAPLLNITADPAPALLEPLLAGGWIAPWSGLMALLEGESKLHI 90
Query: 62 NI-QQDGMNKKYVGVPGMNSICKALC------HQPGVESKFGVGVGRFEWLEDKNLWSVS 114
G YVGV GM+ +C+ L + + + + + D W +
Sbjct: 91 GRPDMLGQGDLYVGVGGMDGLCRGLLDLAAQGEGSAISPHYRTLIRSLD-VSDTGTWRLW 149
Query: 115 GLDGQSLGQFNGVVASDKNVVSPR 138
G LGQ + +V S + PR
Sbjct: 150 DGTGGLLGQADWLVLSSTLLAHPR 173
>gi|409427047|ref|ZP_11261577.1| FAD dependent oxidoreductase [Pseudomonas sp. HYS]
Length = 328
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +++W + G AEWK L +
Sbjct: 40 RMASKRSDAGALDLGAQYFTARDRRFVDQLQQWVAAGWAAEWKPQLYHY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
QDG+ ++VGVP M++I + L V F + E + W + D
Sbjct: 89 QDGVLSPSPDEQTRWVGVPRMSAITRGLLKD--VTVNFSCRIA--EVYRGQKYWHLQDTD 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G S G F+ VV + V +P+ + L+ AP LA + ++P +A+ LAF
Sbjct: 145 GCSHGPFSRVVVA---VPAPQATQL--------LSAAPKLAATAAGVQMDPTWAIALAFD 193
Query: 178 EPLSS 182
PL +
Sbjct: 194 TPLDT 198
>gi|107099676|ref|ZP_01363594.1| hypothetical protein PaerPA_01000694 [Pseudomonas aeruginosa PACS2]
gi|254238602|ref|ZP_04931925.1| hypothetical protein PACG_04757 [Pseudomonas aeruginosa C3719]
gi|386060814|ref|YP_005977336.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
gi|392986326|ref|YP_006484913.1| oxidoreductase [Pseudomonas aeruginosa DK2]
gi|416855515|ref|ZP_11911546.1| putative oxidoreductase [Pseudomonas aeruginosa 138244]
gi|419754595|ref|ZP_14280955.1| putative oxidoreductase [Pseudomonas aeruginosa PADK2_CF510]
gi|421182719|ref|ZP_15640191.1| hypothetical protein PAE2_4670 [Pseudomonas aeruginosa E2]
gi|424944566|ref|ZP_18360329.1| putative oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|451985077|ref|ZP_21933308.1| COG3380: Amine oxidase, flavin-containing [Pseudomonas aeruginosa
18A]
gi|126170533|gb|EAZ56044.1| hypothetical protein PACG_04757 [Pseudomonas aeruginosa C3719]
gi|334842872|gb|EGM21471.1| putative oxidoreductase [Pseudomonas aeruginosa 138244]
gi|346061012|dbj|GAA20895.1| putative oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|347307120|gb|AEO77234.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
gi|384399008|gb|EIE45411.1| putative oxidoreductase [Pseudomonas aeruginosa PADK2_CF510]
gi|392321831|gb|AFM67211.1| putative oxidoreductase [Pseudomonas aeruginosa DK2]
gi|404541465|gb|EKA50822.1| hypothetical protein PAE2_4670 [Pseudomonas aeruginosa E2]
gi|451757251|emb|CCQ85831.1| COG3380: Amine oxidase, flavin-containing [Pseudomonas aeruginosa
18A]
gi|453042707|gb|EME90446.1| oxidoreductase [Pseudomonas aeruginosa PA21_ST175]
Length = 327
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSS 182
E L +
Sbjct: 194 EVLDT 198
>gi|116052802|ref|YP_793119.1| hypothetical protein PA14_61600 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391478|ref|ZP_06880953.1| hypothetical protein PaerPAb_25129 [Pseudomonas aeruginosa PAb1]
gi|313107319|ref|ZP_07793514.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|355652215|ref|ZP_09056650.1| hypothetical protein HMPREF1030_05736 [Pseudomonas sp. 2_1_26]
gi|386063887|ref|YP_005979191.1| hypothetical protein NCGM2_0930 [Pseudomonas aeruginosa NCGM2.S1]
gi|416874238|ref|ZP_11918007.1| hypothetical protein PA15_08012 [Pseudomonas aeruginosa 152504]
gi|421170440|ref|ZP_15628393.1| hypothetical protein PABE177_5168 [Pseudomonas aeruginosa ATCC
700888]
gi|421176910|ref|ZP_15634568.1| hypothetical protein PACI27_5120 [Pseudomonas aeruginosa CI27]
gi|115588023|gb|ABJ14038.1| putative oxidoreductase [Pseudomonas aeruginosa UCBPP-PA14]
gi|310880016|gb|EFQ38610.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|334843642|gb|EGM22228.1| hypothetical protein PA15_08012 [Pseudomonas aeruginosa 152504]
gi|348032446|dbj|BAK87806.1| hypothetical protein NCGM2_0930 [Pseudomonas aeruginosa NCGM2.S1]
gi|354824423|gb|EHF08674.1| hypothetical protein HMPREF1030_05736 [Pseudomonas sp. 2_1_26]
gi|404523502|gb|EKA33923.1| hypothetical protein PABE177_5168 [Pseudomonas aeruginosa ATCC
700888]
gi|404530280|gb|EKA40287.1| hypothetical protein PACI27_5120 [Pseudomonas aeruginosa CI27]
Length = 327
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSS 182
E L +
Sbjct: 194 EVLDT 198
>gi|207742386|ref|YP_002258778.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
IPO1609]
gi|206593776|emb|CAQ60703.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
IPO1609]
Length = 354
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 70 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 124
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 125 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 179
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V + D G P L T AP + PC+ALM+ F++PL
Sbjct: 180 VLALPAPELSALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPL 224
>gi|188577273|ref|YP_001914202.1| lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521725|gb|ACD59670.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 344
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 59 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 114
Query: 71 KYVGVPGMNSICKALC-----HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+YVGVP M + + L H +GV WSVS + F+
Sbjct: 115 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGV---------QGWSVSFAQDAATHMFD 165
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPS 185
V+ + V +P + + AP A ++ ++P +A+M F P+ DP
Sbjct: 166 AVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPI--DPG 213
Query: 186 YQISYLNV 193
Y ++N
Sbjct: 214 YDALFVNA 221
>gi|392421720|ref|YP_006458324.1| amine oxidase, flavin-containing [Pseudomonas stutzeri CCUG 29243]
gi|452747420|ref|ZP_21947215.1| amine oxidase, flavin-containing [Pseudomonas stutzeri NF13]
gi|390983908|gb|AFM33901.1| amine oxidase, flavin-containing [Pseudomonas stutzeri CCUG 29243]
gi|452008536|gb|EME00774.1| amine oxidase, flavin-containing [Pseudomonas stutzeri NF13]
Length = 346
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL-GSFDRVSKKFVNI 63
R S+ + D GA +FT + VR+W+S G V +W ++ S D K +
Sbjct: 59 RMASKRSDAGSLDLGAQYFTARDRRFGETVRQWQSEGWVDQWSPSMYQSHDGQLKPSADE 118
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
Q ++VG P M+SI + L V + E + W++ G S G
Sbjct: 119 Q-----VRWVGTPTMSSITRGLLGDMPVNFSCRI----TEVFRGEQFWTLVDATGVSHGP 169
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ VV + V +P+ + L+ AP LA + + P +A+ L F+ PL++
Sbjct: 170 FSQVVIA---VPAPQAAAL--------LSSAPKLAAVAASVAMEPTWAVALGFATPLNT 217
>gi|393762550|ref|ZP_10351177.1| FAD dependent oxidoreductase [Alishewanella agri BL06]
gi|392606785|gb|EIW89669.1| FAD dependent oxidoreductase [Alishewanella agri BL06]
Length = 310
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TS+ D GA +FT + V+ W+ G+VA W + + + +
Sbjct: 26 RMTSKRTTHGYLDLGAQYFTAREPRFIKQVQHWQQQGVVAPWLAPVWQYQQGKLQPSPDS 85
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q +++GVP M+S K L G+ ++ + + ++ D W ++ + LG F
Sbjct: 86 Q----YRFIGVPAMHSPVKQLAM--GLNVQYQWQLTKLQY--DAAGWWLTDSQARQLGPF 137
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAP-DLAVKLEEIPVNPCFALMLAFSEP---- 179
+ VV S PP P +LA L + PC+A+ + P
Sbjct: 138 SAVVLSI--------------PPAQAAAMLPAELAASLPTASLTPCWAVNIELVAPSGVP 183
Query: 180 ----LSSDPSYQISYLN 192
DP+ +S+L+
Sbjct: 184 AGGIFVKDPALPVSWLS 200
>gi|284039538|ref|YP_003389468.1| FAD dependent oxidoreductase [Spirosoma linguale DSM 74]
gi|283818831|gb|ADB40669.1| FAD dependent oxidoreductase [Spirosoma linguale DSM 74]
Length = 323
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 26/166 (15%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGS-FDRVSKKFVNIQQDGMNKKYVGV 75
DHGA +F+ T ++ LV+E + ++ EWK S D V KK YVGV
Sbjct: 51 DHGAQYFSATTPELQELVQELLADKVITEWKPTQPSPADTVFKK----------PHYVGV 100
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF--NGVVASDKN 133
GMN++ KAL V + V R E +N W V + +S GQ+ + ++ +
Sbjct: 101 EGMNAVAKALSKDLTVRTAETVISFRVE----ENQWLV---ETESGGQYRADALLITIPA 153
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
+ + +G P + D +V L I PC A+M+A ++P
Sbjct: 154 PQALALIEKSGFP-----IVSADKSV-LSAIRYQPCIAVMVALNKP 193
>gi|414868816|tpg|DAA47373.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 384
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 174 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLFE-NEKPRGEY 227
Query: 125 NGVVASDKNVVSPRFRDVTGRP 146
+ VV + + R +G P
Sbjct: 228 DAVVIAHNGKCANRLLSTSGLP 249
>gi|84623417|ref|YP_450789.1| hypothetical protein XOO_1760 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84367357|dbj|BAE68515.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 344
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 59 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 114
Query: 71 KYVGVPGMNSICKALC-----HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+YVGVP M + + L H +GV WSVS + F+
Sbjct: 115 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGV---------QGWSVSFAQDAATHMFD 165
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPS 185
V+ + V +P + + AP A ++ ++P +A+M F P+ DP
Sbjct: 166 AVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPI--DPG 213
Query: 186 YQISYLNV 193
Y ++N
Sbjct: 214 YDALFVNA 221
>gi|226530158|ref|NP_001140386.1| uncharacterized protein LOC100272440 [Zea mays]
gi|223973745|gb|ACN31060.1| unknown [Zea mays]
Length = 505
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 174 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLFE-NEKPRGEY 227
Query: 125 NGVVASDKNVVSPRFRDVTGRP 146
+ VV + + R +G P
Sbjct: 228 DAVVIAHNGKCANRLLSTSGLP 249
>gi|58581488|ref|YP_200504.1| hypothetical protein XOO1865 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58426082|gb|AAW75119.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 363
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 78 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 133
Query: 71 KYVGVPGMNSICKALC-----HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+YVGVP M + + L H +GV WSVS + F+
Sbjct: 134 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGV---------QGWSVSFAQDAATHMFD 184
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPS 185
V+ + V +P + + AP A ++ ++P +A+M F P+ DP
Sbjct: 185 AVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPI--DPG 232
Query: 186 YQISYLNV 193
Y ++N
Sbjct: 233 YDALFVNA 240
>gi|218893754|ref|YP_002442623.1| putative oxidoreductase [Pseudomonas aeruginosa LESB58]
gi|218773982|emb|CAW29797.1| putative oxidoreductase [Pseudomonas aeruginosa LESB58]
Length = 327
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDSE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSS 182
E L +
Sbjct: 194 EVLDT 198
>gi|15599852|ref|NP_253346.1| hypothetical protein PA4657 [Pseudomonas aeruginosa PAO1]
gi|418588039|ref|ZP_13152056.1| hypothetical protein O1O_25105 [Pseudomonas aeruginosa MPAO1/P1]
gi|418590118|ref|ZP_13154033.1| hypothetical protein O1Q_05963 [Pseudomonas aeruginosa MPAO1/P2]
gi|420141845|ref|ZP_14649484.1| hypothetical protein PACIG1_4990 [Pseudomonas aeruginosa CIG1]
gi|421156083|ref|ZP_15615537.1| hypothetical protein PABE171_4911 [Pseudomonas aeruginosa ATCC
14886]
gi|421163216|ref|ZP_15621943.1| hypothetical protein PABE173_5471 [Pseudomonas aeruginosa ATCC
25324]
gi|421519215|ref|ZP_15965887.1| hypothetical protein A161_23188 [Pseudomonas aeruginosa PAO579]
gi|9950911|gb|AAG08044.1|AE004879_10 hypothetical protein PA4657 [Pseudomonas aeruginosa PAO1]
gi|375041179|gb|EHS33892.1| hypothetical protein O1O_25105 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051069|gb|EHS43542.1| hypothetical protein O1Q_05963 [Pseudomonas aeruginosa MPAO1/P2]
gi|403245402|gb|EJY59219.1| hypothetical protein PACIG1_4990 [Pseudomonas aeruginosa CIG1]
gi|404346200|gb|EJZ72551.1| hypothetical protein A161_23188 [Pseudomonas aeruginosa PAO579]
gi|404519462|gb|EKA30214.1| hypothetical protein PABE171_4911 [Pseudomonas aeruginosa ATCC
14886]
gi|404529464|gb|EKA39500.1| hypothetical protein PABE173_5471 [Pseudomonas aeruginosa ATCC
25324]
Length = 327
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDSE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSS 182
E L +
Sbjct: 194 EVLDT 198
>gi|299067906|emb|CBJ39120.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
CMR15]
Length = 333
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R E FDHGA F V V GLV W G + ++Q
Sbjct: 45 RVLPEGAPTHAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADSLQ 99
Query: 65 QDGMNK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D ++ +YVG PGM+++ ++L ++ + G V R W++ DG Q
Sbjct: 100 ADTRDEARYVGQPGMSALVRSLATP--LDVRLGHAVTRVA--PAGKGWTLH-RDGADAAQ 154
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ VV + P D P L AP + PC+ALM+ F+EPL
Sbjct: 155 ADLVVLALPAPELPALFDEGDAPATLRDAIAP--------VRYAPCWALMMGFAEPL 203
>gi|414868817|tpg|DAA47374.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 266
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 174 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLFE-NEKPRGEY 227
Query: 125 NGVVASDKNVVSPRFRDVTGRP 146
+ VV + + R +G P
Sbjct: 228 DAVVIAHNGKCANRLLSTSGLP 249
>gi|408483905|ref|ZP_11190124.1| hypothetical protein PsR81_25249 [Pseudomonas sp. R81]
Length = 328
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + K W++ DG++ G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRI--TEVFQGKQHWNLLDADGENHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT 198
>gi|414868815|tpg|DAA47372.1| TPA: hypothetical protein ZEAMMB73_111446 [Zea mays]
Length = 210
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKAL 85
+Y+GV GM + A+
Sbjct: 174 TPRYIGVNGMRPLADAM 190
>gi|384420080|ref|YP_005629440.1| lipoprotein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462993|gb|AEQ97272.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 344
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 36/191 (18%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 59 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 114
Query: 71 KYVGVPGMNSICK--------ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
+YVGVP M + + LC + G G WSVS +
Sbjct: 115 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGGQG------------WSVSFAQDAATH 162
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + V +P + + AP A ++ ++P +A+M F P+
Sbjct: 163 MFDAVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPI-- 210
Query: 183 DPSYQISYLNV 193
DP Y ++N
Sbjct: 211 DPGYDALFVNA 221
>gi|269914628|pdb|3KKJ|A Chain A, X-Ray Structure Of P. Syringae Q888a4 Oxidoreductase At
Resolution 2.5a, Northeast Structural Genomics
Consortium Target Psr10
gi|269914629|pdb|3KKJ|B Chain B, X-Ray Structure Of P. Syringae Q888a4 Oxidoreductase At
Resolution 2.5a, Northeast Structural Genomics
Consortium Target Psr10
Length = 336
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYV 73
D GA +FT + V++W++ G VAEW L +F R+S ++V
Sbjct: 51 LDXGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLSPS------PDEQVRWV 104
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKN 133
G PG ++I +A V + E + W++ +GQ+ G F+ V+
Sbjct: 105 GKPGXSAITRAXRGDXPVSFSCRI----TEVFRGEEHWNLLDAEGQNHGPFSHVI----- 155
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ +P + T L AP LA + + +P +A+ LAF PL +
Sbjct: 156 IATPAPQAST------LLAAAPKLASVVAGVKXDPTWAVALAFETPLQT 198
>gi|302842207|ref|XP_002952647.1| hypothetical protein VOLCADRAFT_105639 [Volvox carteri f.
nagariensis]
gi|300261991|gb|EFJ46200.1| hypothetical protein VOLCADRAFT_105639 [Volvox carteri f.
nagariensis]
Length = 595
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 20/105 (19%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD---------------- 54
G + FD+G F T T+ + LV EW G+VAEW+ LG +D
Sbjct: 118 GTDFQFDYGCQFLTATSPHMRRLVEEWLEAGVVAEWRPRLGVYDAARGVVKSGEELSAAE 177
Query: 55 --RVSKKFVNIQQDGMNKKYVGVPGMNS--ICKALCHQPGVESKF 95
V + YVGVP M + +C + PG + +
Sbjct: 178 VLEVGSSRLPPLPPPGAPLYVGVPAMGALDVCTDMYPYPGTDDRL 222
>gi|257094708|ref|YP_003168349.1| FAD dependent oxidoreductase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047232|gb|ACV36420.1| FAD dependent oxidoreductase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 336
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + G+ DHGA +FT + D A V W+ G+ W L FD S
Sbjct: 48 RMNTRRGDGWQCDHGAQYFTARHPDFRAEVARWQKAGVAGLWTPRLWLFDGDSPA----G 103
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSV-SGLDGQSLG 122
++ +++VG P M + + L V++ R + L + W V S G
Sbjct: 104 RESTVERFVGTPAMTAPARYLASTLTVQA-----TTRIQQLRHRAPGWQVFSAEQGWLEA 158
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+F V+ + V +P + PL AP+LA + C+AL+L F+ P+
Sbjct: 159 RFAAVLLA---VPAP-------QAVPLLERLAPELAALAGSAVMRGCWALLLRFAAPV-- 206
Query: 183 DPSYQISYLN 192
D + +++N
Sbjct: 207 DLPFDAAFVN 216
>gi|187927513|ref|YP_001898000.1| hypothetical protein Rpic_0410 [Ralstonia pickettii 12J]
gi|309779785|ref|ZP_07674540.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|404394485|ref|ZP_10986289.1| hypothetical protein HMPREF0989_01223 [Ralstonia sp. 5_2_56FAA]
gi|187724403|gb|ACD25568.1| putative transmembrane protein [Ralstonia pickettii 12J]
gi|308921362|gb|EFP67004.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|348616457|gb|EGY65957.1| hypothetical protein HMPREF0989_01223 [Ralstonia sp. 5_2_56FAA]
Length = 332
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V + V G V W G + +Q D
Sbjct: 49 ESAPAYAFDHGAQSFNVRSEVFRRAVDAAGRQGSVLPWPARWGH-----RTIDALQADSR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG+PGM ++ ++L ++ +FG V R D W++ + NG
Sbjct: 104 DEARYVGLPGMGALVRSLAAP--LDVRFGHAVTRVA--HDGRRWTI---------ERNGT 150
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI--PVN--PCFALMLAFSEPL 180
A+ + F + P L F L+E PV+ PC+ALM+ F++PL
Sbjct: 151 DAAHAD-----FLALALPAPELSALFHGATPASLQEAIAPVHYAPCWALMMGFAQPL 202
>gi|388470441|ref|ZP_10144650.1| FAD dependent oxidoreductase [Pseudomonas synxantha BG33R]
gi|388007138|gb|EIK68404.1| FAD dependent oxidoreductase [Pseudomonas synxantha BG33R]
Length = 328
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + W++ DG+S G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRI--TEVFQGTQHWNLLDADGESHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT 198
>gi|344340883|ref|ZP_08771806.1| amine oxidase [Thiocapsa marina 5811]
gi|343799128|gb|EGV17079.1| amine oxidase [Thiocapsa marina 5811]
Length = 320
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 37/194 (19%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T + + FDHGA + T ++ D A++++ G A W DR
Sbjct: 42 RLATRRTPDGLQFDHGAQYVTASSTDFQAVLKQARGDGAAALWNDGAQRTDR-------- 93
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
VG PGM + K L G++ + G+ V W+VS + ++
Sbjct: 94 ------PHVVGTPGMTGLAKHLGR--GLDIRRGIQVTALR--RAGRGWTVSLPEEEA--D 141
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP---- 179
F+ VV + V +P+ D+ G P+ A AV+L +PC LM AF
Sbjct: 142 FDRVVVT---VPAPQLADLLGSDHPISREVA---AVRL-----DPCLTLMAAFDHAAPRP 190
Query: 180 --LSSDPSYQISYL 191
+DP + ++++
Sbjct: 191 FITRTDPEHPLAWI 204
>gi|425440174|ref|ZP_18820482.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719438|emb|CCH96718.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 314
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ LV W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENLVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + P +T P+ L I +PC +M + + L +
Sbjct: 141 SAIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|160899735|ref|YP_001565317.1| FAD dependent oxidoreductase [Delftia acidovorans SPH-1]
gi|160365319|gb|ABX36932.1| FAD dependent oxidoreductase [Delftia acidovorans SPH-1]
Length = 339
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR G DHGAP F + + + VR+WE G+VA W+ R+ K
Sbjct: 30 MSTRRAQDPQGAWQC-DHGAPSFAAQDPEFVQEVRQWEQHGVVAAWRPR---AVRLQGKD 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
V + D ++VGVP M S L Q G ++ + + + W+V +
Sbjct: 86 V-VPADAGPDRWVGVPRMTSPAAFLVQRLAQQGHGARLHLQATVQQLQYESACWTVHCAE 144
Query: 118 -GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
GQ ++ +V + V +P+ + G P +A LA + PC+ ML
Sbjct: 145 HGQIGSEYCALVLA---VPAPQAAALLGPVSP----YASALAASAR---MQPCWVAMLRT 194
Query: 177 SEPLSSD 183
PL D
Sbjct: 195 DAPLPLD 201
>gi|220934065|ref|YP_002512964.1| transmembrane protein [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995375|gb|ACL71977.1| putative transmembrane protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 329
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +FTV + + V W SG V W+ + DR F++ + ++YV
Sbjct: 55 FDAGAQYFTVRDPVFRSYVDTWLSGQRVMPWRGWVVELDR--GDFISRES---AERYVAQ 109
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M ++ + L V V R + ++ LW + G L + +V + +
Sbjct: 110 PSMGALVRHLAEFCDVREH--QAVARADRVD--GLWRLRDGRGVELARCRELVLA---LP 162
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLN 192
+P D+ G AP ++ +L C+A+ML F EPL + +Y+N
Sbjct: 163 APMALDILG-------DAAPQVSTRLAHFETTSCWAVMLGFDEPLPV--PFDAAYVN 210
>gi|163758919|ref|ZP_02166006.1| FAD dependent oxidoreductase [Hoeflea phototrophica DFL-43]
gi|162284209|gb|EDQ34493.1| FAD dependent oxidoreductase [Hoeflea phototrophica DFL-43]
Length = 321
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 31/176 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR S+ GN FDHGA +FT + ALV + G +A W+
Sbjct: 42 MSTRR--SDYGN---FDHGAQYFTSRTPEFTALVNQLVENGDIAPWQPK----------- 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+D +VG PGM+++ KAL G++ +F V ++D + D S
Sbjct: 86 ---GKDSTWPWWVGQPGMSAMGKALAG--GLDIRFQAQVSGINRIDDGYSVEIEAADNAS 140
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
+++ + V + PLD F +E++ + PC+A M+AF
Sbjct: 141 -----NAISAARVVAAIPAPQAASLLVPLDPAF-----TAIEQVVMAPCWAAMVAF 186
>gi|121605824|ref|YP_983153.1| FAD dependent oxidoreductase [Polaromonas naphthalenivorans CJ2]
gi|120594793|gb|ABM38232.1| FAD dependent oxidoreductase [Polaromonas naphthalenivorans CJ2]
Length = 383
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 19/185 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
RET G FDHG +FTV + + + GLV W N + V
Sbjct: 84 RETEFGG----FDHGTQYFTVRDERFEEALTT--ATGLVRPWSANTVRVLDDLGRVVAAS 137
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL----WSVSGLDGQS 120
+V PGMN++ + QP +++ V R ++E+ L W + DG
Sbjct: 138 LPAREAHWVAKPGMNALLRQWA-QPLLDAGHLVPDTRVVYIEEDKLEPQRWQLQ-TDGPG 195
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
G +G A + +P+ R++ D A L L + + PC+ LM+AF P
Sbjct: 196 AGVHSGFDAVVLTIPAPQARELLD-----DSEVAAPLLADLAGVSIAPCWTLMVAF--PQ 248
Query: 181 SSDPS 185
+ P+
Sbjct: 249 AQQPT 253
>gi|288555896|ref|YP_003427831.1| FAD dependent oxidoreductase [Bacillus pseudofirmus OF4]
gi|288547056|gb|ADC50939.1| FAD dependent oxidoreductase [Bacillus pseudofirmus OF4]
Length = 336
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFT ++ + +LV W G V EW D + V+++ DG +YVG
Sbjct: 54 DHGAQFFTARSDVMKSLVDSWMEEGTVNEWTKGFHQMDLGGQ--VHLEADGY-PRYVGSS 110
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMN++ K+L + + L + + LD Q Q+ V ++++ V+
Sbjct: 111 GMNTLTKSLVDENDI------------LLNHRAV----HLDYQK-QQWQLEVINEQDSVT 153
Query: 137 PRFRD---VTGRPPPLDLT------FAPDLAVKLEEIPVNPCFALMLAF 176
+ ++ P P LT D+ ++L I +PC LM+
Sbjct: 154 ETIQAAGIISTIPIPQVLTWMNLELLESDIKIELANITYDPCICLMVTL 202
>gi|307108861|gb|EFN57100.1| hypothetical protein CHLNCDRAFT_143910 [Chlorella variabilis]
Length = 409
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 75/226 (33%), Gaps = 47/226 (20%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S + FD GA FFT + D + EW++ G+V EW+ G F +
Sbjct: 9 RVASRQFEALSFDTGAQFFTARSPDFRKQLEEWQASGVVQEWRGRHGRICTEDGTFELLS 68
Query: 65 QDGMNKK----------------------YVGVPGMNSICKALCH--------------- 87
YVG P N++C+ +
Sbjct: 69 TSSSGGSGSRGGGGGGSSGFCGSLTGLPLYVGTPTNNALCQQMARQLQEQLGAAEVQSGC 128
Query: 88 --QPGVESKFGVGVGRFEW--LEDKNLWSVSG-----LDGQSLGQFNGVVASDKNVVSPR 138
Q + G G +W + + +G D Q LG F+ V+ +D + P
Sbjct: 129 IVQSVTRTSGGCGGAGMQWQLRGSRQGRAAAGEPPQPADQQDLGSFDAVILADAMPLIPG 188
Query: 139 FRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDP 184
L + A LA + CFALM AF +PL P
Sbjct: 189 SAGHVSGIDQLSTSLA-QLARSAQAAAPQACFALMAAFHQPLPGVP 233
>gi|395794841|ref|ZP_10474157.1| hypothetical protein A462_06315 [Pseudomonas sp. Ag1]
gi|421138205|ref|ZP_15598275.1| hypothetical protein MHB_03048 [Pseudomonas fluorescens BBc6R8]
gi|395341002|gb|EJF72827.1| hypothetical protein A462_06315 [Pseudomonas sp. Ag1]
gi|404510628|gb|EKA24528.1| hypothetical protein MHB_03048 [Pseudomonas fluorescens BBc6R8]
Length = 328
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G +WK L +F S +
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQANGCAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V+ FG + E + K+ W++ DG+S G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVQ--FGCRI--TEVFQGKHHWNLLDADGESHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASVAAGVKMDPTWAIALAFDKPLDT 198
>gi|38489211|gb|AAR21290.1| hypothetical protein [Bacillus pseudofirmus OF4]
Length = 214
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFT ++ + +LV W G V EW D + V+++ DG +YVG
Sbjct: 54 DHGAQFFTARSDVMKSLVDSWMEEGTVNEWTKGFHQMDLGGQ--VHLEADGY-PRYVGSS 110
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMN++ K+L + + L + + LD Q Q+ V ++++ V+
Sbjct: 111 GMNTLTKSLVDENDI------------LLNHRAV----HLDYQK-QQWQLEVINEQDSVT 153
Query: 137 PRFRD---VTGRPPPLDLT------FAPDLAVKLEEIPVNPCFALMLAF 176
+ ++ P P LT D+ ++L I +PC LM+
Sbjct: 154 ETIQAAGIISTIPIPQVLTWMNLELLESDIKIELANITYDPCICLMVTL 202
>gi|359394407|ref|ZP_09187460.1| Dehydrosqualene desaturase [Halomonas boliviensis LC1]
gi|357971654|gb|EHJ94099.1| Dehydrosqualene desaturase [Halomonas boliviensis LC1]
Length = 356
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ D GA F+V + D V EW + G +A W + S +
Sbjct: 49 RMSSKRRPSATLDLGAQAFSVRDVDFQRAVDEWLAAGCIAAWPTRT---YQASSRGWQAH 105
Query: 65 QDGMNKKYVGVPGMNSICK----ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
DG K+Y G P M+++ + +L QP E G + N W + G DG
Sbjct: 106 NDG-QKRYTGAPRMSALTRHMADSLTAQPNAELHTGTPIAALN--PSPNGWMLVGADGVH 162
Query: 121 LGQFNGVVAS 130
G ++ +V S
Sbjct: 163 HGPYDQIVIS 172
>gi|87199251|ref|YP_496508.1| deoxyribodipyrimidine photolyase [Novosphingobium aromaticivorans
DSM 12444]
gi|87134932|gb|ABD25674.1| putative deoxyribodipyrimidine photolyase [Novosphingobium
aromaticivorans DSM 12444]
Length = 324
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 72/186 (38%), Gaps = 41/186 (22%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + G+ FDHGA +FTV + +A V W + G+ A W
Sbjct: 41 MSTRRMETPLGDAH-FDHGAQYFTVRDPAFMAQVARWSASGVAAPWPA------------ 87
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VGVPGMN++ + + + V FG W V GL ++
Sbjct: 88 ------AGTGAWVGVPGMNAVIREMAERHDV--TFG--------------WHVRGLVNRN 125
Query: 121 LGQ-FNGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPV--NPCFALML 174
G G + + V F V PP + DL++ + PC+ M
Sbjct: 126 GGWLLTGDASGGQRVQDGPFDAVVVSIPPEQAAAIVALHDLSLASTALAARSQPCWTGMY 185
Query: 175 AFSEPL 180
AF+E L
Sbjct: 186 AFAERL 191
>gi|77460953|ref|YP_350460.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Pf0-1]
gi|77384956|gb|ABA76469.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 328
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSKGWVAEWAPQLYTFH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLL--DGLEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT 198
>gi|398974396|ref|ZP_10685023.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM25]
gi|398141598|gb|EJM30514.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM25]
Length = 328
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSKGWVAEWAPQLYTF---HGGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLL--DGLEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT 198
>gi|260802390|ref|XP_002596075.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
gi|229281329|gb|EEN52087.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
Length = 276
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R G LFDH A +FTV++N +V + G V W +G +FV
Sbjct: 51 RTVDVGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLK--GGRFV--- 105
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ + +VG GM S+ + L V+ VG W W V G F
Sbjct: 106 KNANLQAFVGTGGMKSVPECLATLSRVQRP--AWVGNVVWEPMAKKWKV-----DKYGYF 158
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ +V + + R G P L + F P L K++++ + + L++ F L
Sbjct: 159 DYLVIAHNGKCADRLMGSAGAPKIHELLRVRFTPKLIQKVQQMQLCSLWVLLVVFPASL 217
>gi|425469622|ref|ZP_18848542.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880491|emb|CCI38747.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 314
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + P +T P+ L I +PC +M A+ + L +
Sbjct: 141 SVIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAAYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|289662806|ref|ZP_06484387.1| hypothetical protein XcampvN_06873 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 336
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G+ DHGA +FT + ++V W G+ A W+ + S+D
Sbjct: 51 GDHWQCDHGAQYFTARDPAFASVVDAWIDAGIAAPWQARIASWDGAQLS----HSHSALT 106
Query: 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130
+YVGVP M + + L + ++ + V + WSVS + F+ V+ +
Sbjct: 107 RYVGVPDMAAPARVLAVR--LDIRLSTEVHALQ--RSGQGWSVSCAQDTAAHMFDAVLLA 162
Query: 131 DKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISY 190
V +P + PP+ AP + + P +A++ F P+ DP Y +
Sbjct: 163 ---VPTPNAAKLF---PPI----APAFSSIAPHAQMQPAWAVIAHFDGPV--DPGYDALF 210
Query: 191 LN 192
+N
Sbjct: 211 VN 212
>gi|443645378|ref|ZP_21129228.1| Putative NAD/FAD-dependent oxidoreductase [Pseudomonas syringae pv.
syringae B64]
gi|443285395|gb|ELS44400.1| Putative NAD/FAD-dependent oxidoreductase [Pseudomonas syringae pv.
syringae B64]
Length = 328
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|339494519|ref|YP_004714812.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338801891|gb|AEJ05723.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 359
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++GG V +W L F +
Sbjct: 72 RMASKRSDAGSLDLGAQYFTARDRRFAETVRQWQAGGWVDQWTPTL--FQSRDGQLSPSA 129
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ G S G F
Sbjct: 130 DEQL--RWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQYWTLVDATGASHGPF 183
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 184 SHVVIALPAPQA-----------AALLSGAPKLAAVAASVAMEPTWAVALGFATPLGT 230
>gi|424070824|ref|ZP_17808256.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407999907|gb|EKG40277.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 328
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|424066176|ref|ZP_17803648.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408002579|gb|EKG42823.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 328
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|398969091|ref|ZP_10682704.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM30]
gi|398142785|gb|EJM31676.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM30]
Length = 328
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSLGWVAEWTPQLYTFQ---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLL--DGLEVHFACRI--TEVFRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT 198
>gi|425450461|ref|ZP_18830287.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
gi|389768693|emb|CCI06265.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
Length = 314
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + P +T P+ L I +PC +M + + L +
Sbjct: 141 SAIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|390993399|ref|ZP_10263564.1| putative deoxyribodipyrimidine photolyase [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372551868|emb|CCF70539.1| putative deoxyribodipyrimidine photolyase [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 336
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + F+ V+ + V +
Sbjct: 113 EMPAPARTLAAQLDVRLCAEVHALR----RSRQGWRVSVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLNV 193
P + + P T A E++ + P +A+M F P+ DP Y ++N
Sbjct: 166 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAPI--DPGYDALFVNA 213
>gi|312958867|ref|ZP_07773386.1| hypothetical protein PFWH6_0763 [Pseudomonas fluorescens WH6]
gi|311286637|gb|EFQ65199.1| hypothetical protein PFWH6_0763 [Pseudomonas fluorescens WH6]
Length = 328
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + + W++ DG G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRITDV--FQGTQHWNLLDADGGHHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + T L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVV-----IATPAPQATT------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLET 198
>gi|381172517|ref|ZP_09881643.1| putative uncharacterized protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687007|emb|CCG38130.1| putative uncharacterized protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 336
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + F+ V+ + V +
Sbjct: 113 EMPAPARTLAAQLDVRLCAEVHALR----RSRQGWRVSVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLNV 193
P + + P T A E++ + P +A+M F P+ DP Y ++N
Sbjct: 166 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAPI--DPGYDALFVNA 213
>gi|398985073|ref|ZP_10690900.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM24]
gi|399013268|ref|ZP_10715578.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM16]
gi|398114207|gb|EJM04039.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM16]
gi|398154676|gb|EJM43142.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM24]
Length = 328
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSQGWVAEWTPQLYTYQ---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGAPRMSAITRGLL--DGLEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFETPLDT 198
>gi|294626956|ref|ZP_06705547.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598816|gb|EFF42962.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 336
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 20/189 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + DHGA +FT + A+V W G+ A W+ + S+D + +
Sbjct: 45 RTRHYSAEQWQCDHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----R 100
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+YVGVP M + + L Q V V R + W V+ + F
Sbjct: 101 PQSALTRYVGVPEMTAPARTLAAQLDVRLCAEVHALR----RSRQGWRVAVSQDAAEPLF 156
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDP 184
+ V+ + V +P + + P T A E++ + P +A+M F P+ DP
Sbjct: 157 DTVLLA---VPAPSTAALLAQAAPALRTIA-------EQVRMQPAWAVMARFDVPI--DP 204
Query: 185 SYQISYLNV 193
Y ++N
Sbjct: 205 GYDALFVNA 213
>gi|146282856|ref|YP_001173009.1| amine oxidase, flavin-containing [Pseudomonas stutzeri A1501]
gi|145571061|gb|ABP80167.1| amine oxidase, flavin-containing [Pseudomonas stutzeri A1501]
Length = 328
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++GG V +W L F +
Sbjct: 41 RMASKRSDAGSLDLGAQYFTARDRRFAETVRQWQAGGWVDQWTPTL--FQSRDGQLSPSA 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ G S G F
Sbjct: 99 DEQL--RWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQYWTLVDATGASHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 153 SHVIIALPAPQA-----------AALLSGAPKLAAVAASVAMEPTWAVALGFATPLGT 199
>gi|395500665|ref|ZP_10432244.1| hypothetical protein PPAM2_31462 [Pseudomonas sp. PAMC 25886]
Length = 328
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQAQGCAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V FG + E + K+ W++ DG++ G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVH--FGCRI--TEVFQGKHHWNLLDADGENHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT 198
>gi|357976443|ref|ZP_09140414.1| putative deoxyribodipyrimidine photolyase [Sphingomonas sp. KC8]
Length = 314
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + G E+ FDHGA +FT + D V W + G+V W++
Sbjct: 39 MSTRRVETSLG-EVSFDHGAQYFTARSPDFCKQVESWAARGIVRRWQLP----------- 86
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFE 103
++G PGMN++ KA+ + V ++ V V R E
Sbjct: 87 -------APDAWIGAPGMNAMVKAMAGEHDV--RWNVHVNRIE 120
>gi|398854294|ref|ZP_10610864.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM80]
gi|398236386|gb|EJN22171.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM80]
Length = 328
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGSLDLGAQYFTARDRRFVTEVQRWQSQGWVAEWTPQLYTYQ---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGAPRMSAITRGLL--DGLEVHFACRI--TEVFRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT 198
>gi|159485780|ref|XP_001700922.1| hypothetical protein CHLREDRAFT_167639 [Chlamydomonas reinhardtii]
gi|158281421|gb|EDP07176.1| predicted protein [Chlamydomonas reinhardtii]
Length = 856
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 20/166 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQ-DGMNKKYVG 74
+DHG FF T+ + LV EW + G+VAEW+ LG +D S F ++ + G
Sbjct: 21 YDHGCQFFKATSPAMKKLVAEWVAAGVVAEWRPKLGVYDASSGVFKRREELSAAELQAAG 80
Query: 75 VPGMNSICKA----LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG-----QSLGQ-- 123
+S+ A +P +++ G G L LW++ D S GQ
Sbjct: 81 SGFFDSLSPASGPMYVAKPSMDTLVGSNGGVDPGLPAGELWNLGVFDALLITDSSPGQIT 140
Query: 124 FNGVVASDKNVVS--------PRFRDVTGRPPPLDLTFAPDLAVKL 161
F G A+ +V+ P F + G PP + P AV +
Sbjct: 141 FEGGTAALSALVARLAALTRVPLFSLMVGWPPNVAGALLPGDAVHV 186
>gi|260802418|ref|XP_002596089.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
gi|229281343|gb|EEN52101.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
Length = 401
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R G LFDH A +FTV++N +V + G V W +G +FV
Sbjct: 51 RTVDVGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLK--GGRFV--- 105
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ + +VG GM S+ + L V+ VG W W V G F
Sbjct: 106 KNANLQAFVGTGGMKSVPECLATLSRVQRP--AWVGNVVWEPMAKKWKV-----DKYGYF 158
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ +V + + R G P L + F P L K++++ + + L++ F L
Sbjct: 159 DYLVIAHNGKCADRLMGSAGAPKIHELLRVRFTPKLIQKVQQMQLCSLWVLLVVFPTSL 217
>gi|333914188|ref|YP_004487920.1| FAD dependent oxidoreductase [Delftia sp. Cs1-4]
gi|333744388|gb|AEF89565.1| FAD dependent oxidoreductase [Delftia sp. Cs1-4]
Length = 352
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR G DHGAP F + + + VR+WE G+VA W+ R+ K
Sbjct: 43 MSTRRAQDPQGAWQC-DHGAPSFAAQDPEFVQEVRQWEQHGVVAAWRPR---AVRLQGKD 98
Query: 61 VNIQQDGMNKKYVGVPGMNS 80
V + D ++VGVP M S
Sbjct: 99 V-VPADAGPDRWVGVPRMTS 117
>gi|103486488|ref|YP_616049.1| hypothetical protein Sala_0999 [Sphingopyxis alaskensis RB2256]
gi|98976565|gb|ABF52716.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 320
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 19/85 (22%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + G E+ FDHGA FTV + D A V WE+ G A W
Sbjct: 40 MAARRAATPRG-EIAFDHGATHFTVRSADFRARVDRWEAAGCAAPWP------------- 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKAL 85
D ++GVP MN+ K +
Sbjct: 86 -----DAGQDAWIGVPTMNAPLKHM 105
>gi|229588299|ref|YP_002870418.1| hypothetical protein PFLU0754 [Pseudomonas fluorescens SBW25]
gi|229360165|emb|CAY47022.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 328
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + K W++ D ++ G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRI--TEVFQGKQHWNLLDADSENHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT 198
>gi|21242085|ref|NP_641667.1| hypothetical protein XAC1332 [Xanthomonas axonopodis pv. citri str.
306]
gi|21107492|gb|AAM36203.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 336
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + F+ V+ + V +
Sbjct: 113 EMPAPARTLAAQLDVRLCAEVHALR----RGRQGWRVSVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLNV 193
P + + P T A E++ + P +A+M F P+ DP Y ++N
Sbjct: 166 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAPI--DPGYDALFVNA 213
>gi|152987397|ref|YP_001350638.1| hypothetical protein PSPA7_5306 [Pseudomonas aeruginosa PA7]
gi|150962555|gb|ABR84580.1| hypothetical protein PSPA7_5306 [Pseudomonas aeruginosa PA7]
Length = 327
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EW+ L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWQPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL V + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALLTDLPVVFSCRI----TEVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---LPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSS 182
E L +
Sbjct: 194 EVLDT 198
>gi|422620506|ref|ZP_16689184.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. japonica
str. M301072]
gi|440720036|ref|ZP_20900457.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34876]
gi|440726162|ref|ZP_20906418.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34881]
gi|330900864|gb|EGH32283.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. japonica
str. M301072]
gi|440366758|gb|ELQ03835.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34876]
gi|440366895|gb|ELQ03965.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34881]
Length = 328
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|374702509|ref|ZP_09709379.1| FAD dependent oxidoreductase [Pseudomonas sp. S9]
Length = 330
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 25/181 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G ++W+ +L ++ +
Sbjct: 42 RMASKRSDAGALDLGAQYFTARDRRFVEVVQQWQARGWASQWQPSLYNYRDGELSASPDE 101
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +A+ + KF + E ++ WS+ +GQS G F
Sbjct: 102 Q----VRWVGSPRMSAITRAML--GALPVKFSCRI--TEVYRGEHHWSLQDAEGQSHGPF 153
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLT---FAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ V V P P T AP LA + ++P +A+ L+F+ PL
Sbjct: 154 SHV--------------VIAMPAPQATTLLAAAPKLAAAAASVSMDPTWAVALSFASPLD 199
Query: 182 S 182
+
Sbjct: 200 T 200
>gi|422661581|ref|ZP_16723844.1| amine oxidase, flavin-containing, partial [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330982721|gb|EGH80824.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 246
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|241662043|ref|YP_002980403.1| hypothetical protein Rpic12D_0425 [Ralstonia pickettii 12D]
gi|240864070|gb|ACS61731.1| putative transmembrane protein [Ralstonia pickettii 12D]
Length = 355
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V + V G V W G + ++ D
Sbjct: 72 ESAPAYAFDHGAQSFNVRSEVFRRAVDAAGRQGSVLPWPARWGH-----RTVDGLEADSR 126
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG+PGM ++ ++L ++ +FG V R D W++ + NG
Sbjct: 127 DEARYVGLPGMGALVRSLAAP--LDVRFGRAVTRVT--HDGRRWTI---------ERNGT 173
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI--PVN--PCFALMLAFSEPL 180
A+ + F + P L F L+E PV+ PC+ALM+ F++PL
Sbjct: 174 DAAHAD-----FLALALPAPELPALFHGATPASLQEAIAPVHYAPCWALMMGFAQPL 225
>gi|146306109|ref|YP_001186574.1| FAD dependent oxidoreductase [Pseudomonas mendocina ymp]
gi|145574310|gb|ABP83842.1| FAD dependent oxidoreductase [Pseudomonas mendocina ymp]
Length = 328
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G W L ++ + +
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQNRGWAEPWAPEL--YNSQAGQLSPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V + E + WS+ DG S G F
Sbjct: 98 DEQV--RWVGAPRMSAISRALLGALPVHFSCRI----TEVFRGGSHWSLQDADGNSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVIVATP---APQASAL--------LACAPKLAGVAASVVMEPTWAVALAFDTPLDT 198
>gi|390440103|ref|ZP_10228455.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836469|emb|CCI32579.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 314
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E ++K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENHQEK--WFLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + P +T P+ L I +PC +M + + L +
Sbjct: 141 SVIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|329901867|ref|ZP_08272954.1| putative deoxyribodipyrimidine photolyase [Oxalobacteraceae
bacterium IMCC9480]
gi|327548959|gb|EGF33576.1| putative deoxyribodipyrimidine photolyase [Oxalobacteraceae
bacterium IMCC9480]
Length = 330
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 22/180 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FDHGA +FT +++ V W G VA W+ + D + ++VGV
Sbjct: 49 FDHGAQYFTASSDTFKKDVASWTKAGWVAPWQGKFVALDHGTATVAGKS----GSRHVGV 104
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQSLGQFNGVVASDK 132
PGM S+ L G++ + G V E ++ L +V S G F+ V+ +
Sbjct: 105 PGMRSVGVHLAQ--GLDVRTGQRVDHIEAHGEQWLLAVHCDTVPVAASAGPFDAVIVA-- 160
Query: 133 NVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLN 192
V L P A ++ + PC+ LM AF + L + Y +++N
Sbjct: 161 ---------VPADQATALLEVVPAFAKAAKKAFLVPCWTLMAAFQDSL--ELGYDGAWVN 209
>gi|421506151|ref|ZP_15953082.1| FAD dependent oxidoreductase [Pseudomonas mendocina DLHK]
gi|400343101|gb|EJO91480.1| FAD dependent oxidoreductase [Pseudomonas mendocina DLHK]
Length = 328
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G W L ++ + +
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQNRGWAEPWAPEL--YNSQAGQLSPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V + E + WS+ DG S G F
Sbjct: 98 DEQV--RWVGAPRMSAISRALLGALPVHFSCRI----TEVFRGGSHWSLQDTDGNSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVIVATP---APQASAL--------LACAPKLAGVAASVVMEPTWAVALAFDTPLDT 198
>gi|255072361|ref|XP_002499855.1| predicted protein [Micromonas sp. RCC299]
gi|226515117|gb|ACO61113.1| predicted protein [Micromonas sp. RCC299]
Length = 429
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 18/154 (11%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWK---VNLGSFDRV- 56
S R +G M FDHGA FFT + A+ E ++ G VA W L +FD V
Sbjct: 48 TSSSRPVEVNGETMAFDHGAQFFTANDPKFKAVCEELKAKGYVARWDGVFGTLNAFDGVF 107
Query: 57 -SKKFVNI----QQD-----GMNKKYVGVPGMNSICKALCHQPG--VESKFGVGVGRFEW 104
K+ V +QD ++ VGVP +IC+ L G V + + V +
Sbjct: 108 IPKRRVETMGPPRQDFFKLLTADEVLVGVPTNQAICEGLRALAGDDVTAHWHTTVTGLDL 167
Query: 105 LEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPR 138
WS+SG++ + L + G S + +S R
Sbjct: 168 DASGKTWSLSGVNKRRLDE--GRAGSKEKRLSGR 199
>gi|325920669|ref|ZP_08182579.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas gardneri
ATCC 19865]
gi|325548859|gb|EGD19803.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas gardneri
ATCC 19865]
Length = 336
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S G+ DHGA +FT + A+V EW + G+ A W + S+D + +F Q
Sbjct: 45 RMRSCAGDGWQCDHGAQYFTARDRAFAAVVDEWIATGVAAAWPARVASWDGI--QFRPSQ 102
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VGVP M + +AL ++ + G V + + + W ++ ++ F
Sbjct: 103 S--VLARFVGVPDMAAPARALAAD--LDVRLGTAVRSLQ--RNGDTWCLAVSGDETRRAF 156
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDP 184
+ ++ + V+ AP LA + P +A++L F PL DP
Sbjct: 157 DTMLLAVPAPVAAALLQ----------HIAPRLAAIAAGANMQPAWAVVLHFDTPL--DP 204
Query: 185 SYQISYLNV 193
Y ++N
Sbjct: 205 GYDALFVNA 213
>gi|260802416|ref|XP_002596088.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
gi|229281342|gb|EEN52100.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
Length = 401
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R G LFDH A +FTV++N +V + G V W +G +FV
Sbjct: 51 RTVDVGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLK--GGRFV--- 105
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ + +VG GM S+ + L V+ VG W W V G F
Sbjct: 106 KNTNLQAFVGTGGMKSVPECLATLSRVQRP--AWVGNVVWEPMAKKWKV-----DKYGYF 158
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ +V + + R G P L + F P L K++++ + + L++ F L
Sbjct: 159 DYLVIAHNGKCADRLMGSAGAPKIHELLRVRFTPKLIQKVQQMQLCSLWVLLVVFPTSL 217
>gi|83859572|ref|ZP_00953092.1| probable deoxyribodipyrimidine photolyase [Oceanicaulis sp.
HTCC2633]
gi|83851931|gb|EAP89785.1| probable deoxyribodipyrimidine photolyase [Oceanicaulis sp.
HTCC2633]
Length = 331
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 79/203 (38%), Gaps = 42/203 (20%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + G + FDHGA F T T + + + G W S DR
Sbjct: 42 MSTRRAETPLG-PVRFDHGAQFITATGESFSEFLEQARTAGAADLWTGRTVSIDRGG--- 97
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
N + ++VGVPGM++I K G +++FG + VSG G
Sbjct: 98 -NAESLREKTRWVGVPGMSAIVKTALD--GFDARFG-----------RRASHVSGEAGAW 143
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTF------------APDLAVKLEEIPVNP 168
+ F D V P R V PP + F A LA KL +P
Sbjct: 144 MIHFE-----DSPVEGPFDRLVLTLPPEQLIEFLARSDGDFSEIIAEALATKL-----SP 193
Query: 169 CFALMLAFSEPLSSDPSYQISYL 191
C+A+M + ++DP + + L
Sbjct: 194 CWAVMTVPAN--AADPGFDGAKL 214
>gi|384082266|ref|ZP_09993441.1| amine oxidase [gamma proteobacterium HIMB30]
Length = 311
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA FFTV + ALV S G V WK +G+F + + +
Sbjct: 27 RLASKRIEQQRADIGAQFFTVRDPRFQALVELAHSAGAVQPWKPRMGTF----QSSIPVD 82
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESK 94
+++VG P MN++ + L +ES+
Sbjct: 83 SPDTQRRFVGAPYMNALGRFLTQSVRIESQ 112
>gi|428773848|ref|YP_007165636.1| amine oxidase [Cyanobacterium stanieri PCC 7202]
gi|428688127|gb|AFZ47987.1| amine oxidase [Cyanobacterium stanieri PCC 7202]
Length = 321
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S + DHG +F+++NN + ++ + G ++ W+ S++ V +
Sbjct: 40 RMSSRRTDWGYIDHGTQYFSLSNNQLKEFIKIY--GDVLKPWQGKFASWENG----VFEK 93
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D KYV MN++CK L V+ K + ++ + W++ G F
Sbjct: 94 DDSPKIKYVPDKAMNNLCKFLGGDITVKLKTRI----CSIVKVDDSWTLRDEQNHCYGDF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALML 174
+GV+ + +P ++ T P D F ++A +I + PCF+LM+
Sbjct: 150 DGVI-----ITAPPYQ--TANLLPDDCLFKAEIA----QIKMFPCFSLMV 188
>gi|147823105|emb|CAN66332.1| hypothetical protein VITISV_000600 [Vitis vinifera]
Length = 463
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV + LV W GLV +W+ +G + V +FV + +
Sbjct: 7 DPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELE-VGGQFVPL--PSLP 63
Query: 70 KKYVGVPGMNSICKALCHQ 88
+Y+GV GM + ++ Q
Sbjct: 64 PRYIGVNGMRPLADSILSQ 82
>gi|422638690|ref|ZP_16702121.1| amine oxidase, flavin-containing [Pseudomonas syringae Cit 7]
gi|440744572|ref|ZP_20923875.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP39023]
gi|330951085|gb|EGH51345.1| amine oxidase, flavin-containing [Pseudomonas syringae Cit 7]
gi|440373990|gb|ELQ10733.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP39023]
Length = 328
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|339051146|ref|ZP_08647917.1| Deoxyribodipyrimidine photolyase2C type II [gamma proteobacterium
IMCC2047]
gi|330721651|gb|EGG99664.1| Deoxyribodipyrimidine photolyase2C type II [gamma proteobacterium
IMCC2047]
Length = 349
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 33/186 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEW--KVNLGSFDRVSKKFVN 62
R ++ FDHGA FFT + ++ + G V W +V + D +
Sbjct: 46 RMSTRYAQHYQFDHGAQFFTARSKSFNTFLKPLLADGTVQPWQPRVLTLALDEQGRAKKP 105
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVE-----SKFGVGVGRFEWLEDKNLWSVSGLD 117
++D YV P MN + K L + + S VG W + +
Sbjct: 106 YKRDWFEPHYVAAPKMNHLAKVLAKERDIHLETQLSGLKKTVGG---------WVLEDIQ 156
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDL---AVKLEEIPVNPCFALML 174
G G F+ VV++ P P P + + C+ LML
Sbjct: 157 GHQHGVFDWVVST--------------APAPQTAALLPQTFSGYADIRHTNMEGCYCLML 202
Query: 175 AFSEPL 180
SEPL
Sbjct: 203 GLSEPL 208
>gi|422671623|ref|ZP_16730989.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. aceris
str. M302273]
gi|330969363|gb|EGH69429.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. aceris
str. M302273]
Length = 328
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|66044218|ref|YP_234059.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. syringae
B728a]
gi|63254925|gb|AAY36021.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. syringae
B728a]
Length = 328
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|387891973|ref|YP_006322270.1| FAD dependent oxidoreductase [Pseudomonas fluorescens A506]
gi|387162521|gb|AFJ57720.1| FAD dependent oxidoreductase [Pseudomonas fluorescens A506]
Length = 328
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRI--TEVFQGTQHWNLLDADGGNHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT 198
>gi|226946174|ref|YP_002801247.1| FAD dependent oxidoreductase [Azotobacter vinelandii DJ]
gi|226721101|gb|ACO80272.1| FAD dependent oxidoreductase [Azotobacter vinelandii DJ]
Length = 329
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
D GA +FT + V++W G +AEW+ +L +D + Q + + +++G
Sbjct: 51 LDLGAQYFTCRDRRFAEAVQQWRDRGWIAEWQPSL--YDSANGTLRPSQDEQI--RWIGT 106
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M+++ + L V +F + E K W + DG++ G FN VV V
Sbjct: 107 PRMSALTRGLLGDMPV--RFSCRI--TEVFHGKQHWMLQDADGKAYGPFNQVV-----VA 157
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+P + L AP LA + + + P +A+ L+F +PL +
Sbjct: 158 TPSPQAAQ------LLAAAPKLASSVASVAMEPNWAVALSFEQPLDT 198
>gi|407958012|dbj|BAM51252.1| hypothetical protein BEST7613_2321 [Bacillus subtilis BEST7613]
Length = 318
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 19/170 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +F + LA V +W G+V W +G+ + I+ G+ K Y G
Sbjct: 40 FDFGAQYFKAQHPLFLAWVEDWIKAGVVKVWAEGMGT------ETGTIRSQGV-KLYRGE 92
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P S+ + L V ++ V F W N+W + G G+ D+ VV
Sbjct: 93 PSNRSLAQYLAQDLKVVNQEKVNA--FHW--QDNIWQIHCDSG-------GIYQGDRLVV 141
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP-LSSDP 184
+ ++ D+ L + +PCF+L L +P L DP
Sbjct: 142 TAPLPQTLELLTVSNINLPADIQQTLTGVVYDPCFSLSLLLEQPSLVPDP 191
>gi|351729485|ref|ZP_08947176.1| FAD dependent oxidoreductase [Acidovorax radicis N35]
Length = 333
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR E G DHGA +FT + A V W+ G+ A W L SFD
Sbjct: 45 MSTRRAEDEHGAWQC-DHGAQYFTARDPAFRAEVARWQRAGVAAVWNARLASFD----GS 99
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPG 90
+ K++VG P M S L G
Sbjct: 100 IWTTPHTPLKRFVGTPRMTSPAAWLVQSLG 129
>gi|381208123|ref|ZP_09915194.1| fumarate reductase/succinate dehydrogenase flavoprotein
domain-containing protein, partial [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 277
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 31/172 (18%)
Query: 13 EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKY 72
E DHGA FFTV ++ VR WE G+ W K ++ DG + ++
Sbjct: 5 EFRLDHGAQFFTVRDSRFEKYVRRWEKAGVAKIW-----------CKGFSLAGDG-HLRF 52
Query: 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDK 132
G GMNSI K L Q V + V + W LD ++ F V A
Sbjct: 53 RGTDGMNSIPKWLAGQLDVRTGHKVKSVQLA----HQSWQ---LDFEA---FPSVCADQL 102
Query: 133 NVVSPRFRDV----TGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ SP + + TG+ + A L +I +PC A+M+ +PL
Sbjct: 103 LMTSPVPQSIALLETGK-----VELASSTKNYLNKISYDPCIAMMVLPKQPL 149
>gi|302185905|ref|ZP_07262578.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. syringae
642]
Length = 328
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTEGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|425434511|ref|ZP_18814980.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
gi|389675999|emb|CCH94927.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
Length = 314
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV GMNS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGMNSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M + + L +
Sbjct: 141 SAIVLA---IPAPQAALLLENSC---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|16330108|ref|NP_440836.1| hypothetical protein sll1135 [Synechocystis sp. PCC 6803]
gi|383321851|ref|YP_005382704.1| hypothetical protein SYNGTI_0942 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325020|ref|YP_005385873.1| hypothetical protein SYNPCCP_0941 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490904|ref|YP_005408580.1| hypothetical protein SYNPCCN_0941 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436171|ref|YP_005650895.1| hypothetical protein SYNGTS_0942 [Synechocystis sp. PCC 6803]
gi|451814267|ref|YP_007450719.1| hypothetical protein MYO_19490 [Synechocystis sp. PCC 6803]
gi|1652595|dbj|BAA17516.1| sll1135 [Synechocystis sp. PCC 6803]
gi|339273203|dbj|BAK49690.1| hypothetical protein SYNGTS_0942 [Synechocystis sp. PCC 6803]
gi|359271170|dbj|BAL28689.1| hypothetical protein SYNGTI_0942 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274340|dbj|BAL31858.1| hypothetical protein SYNPCCN_0941 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277510|dbj|BAL35027.1| hypothetical protein SYNPCCP_0941 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451780236|gb|AGF51205.1| hypothetical protein MYO_19490 [Synechocystis sp. PCC 6803]
Length = 334
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 19/170 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +F + LA V +W G+V W +G+ + I+ G+ K Y G
Sbjct: 56 FDFGAQYFKAQHPLFLAWVEDWIKAGVVKVWAEGMGT------ETGTIRSQGV-KLYRGE 108
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P S+ + L V ++ V F W N+W + G G+ D+ VV
Sbjct: 109 PSNRSLAQYLAQDLKVVNQEKVNA--FHW--QDNIWQIHCDSG-------GIYQGDRLVV 157
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP-LSSDP 184
+ ++ D+ L + +PCF+L L +P L DP
Sbjct: 158 TAPLPQTLELLTVSNINLPADIQQTLTGVVYDPCFSLSLLLEQPSLVPDP 207
>gi|399545112|ref|YP_006558420.1| Dehydrosqualene desaturase [Marinobacter sp. BSs20148]
gi|399160444|gb|AFP31007.1| Dehydrosqualene desaturase [Marinobacter sp. BSs20148]
Length = 358
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 31/170 (18%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDG-------MN 69
D G +FT N D L +R V W LG QQD
Sbjct: 68 DMGGQYFTTRNPDFLPFLRRHAGEQTVVPWHGLLG-----------YQQDNGDWSEFPAE 116
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
++YVG P M +I + L G+ + V R W + DGQ+LG F+ V+
Sbjct: 117 QRYVGAPRMTAITRGLS--AGLNVQAQTRVARLHRDSQVKKWHLQDADGQNLGAFDQVII 174
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEE--IPVNPCFALMLAFS 177
+ + L+ + A LA++L + PC+A+ + FS
Sbjct: 175 TAPPAQARAL---------LEDSSAAQLAIELNTAVAQILPCWAVAVKFS 215
>gi|429212761|ref|ZP_19203926.1| putative oxidoreductase [Pseudomonas sp. M1]
gi|428157243|gb|EKX03791.1| putative oxidoreductase [Pseudomonas sp. M1]
Length = 327
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 33/185 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + L ++ W G VAEW L +
Sbjct: 40 RMASKRSDAGALDLGAQYFTARDRRFLDAIQHWRDAGWVAEWDPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DGM ++VG P M++I +AL G++ F + E + W + +
Sbjct: 89 RDGMLSPSPDEQPRWVGTPRMSAITRALLQ--GLQVTFSCRI--TEVFRGQQHWHLQDSE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G + G F+ V+ + + L AP LA I + P +A+ L F+
Sbjct: 145 GCNHGPFSHVLVATPAPQA-----------AALLAGAPKLAAAAASIAMEPTWAVALGFA 193
Query: 178 EPLSS 182
EPL +
Sbjct: 194 EPLQT 198
>gi|365092851|ref|ZP_09329931.1| hypothetical protein KYG_14348 [Acidovorax sp. NO-1]
gi|363415037|gb|EHL22172.1| hypothetical protein KYG_14348 [Acidovorax sp. NO-1]
Length = 338
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 1 MSQRRETSEDGN-EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKK 59
MS RR +EDG+ DHGA +FT + A V W+ G+ A W L SFD +
Sbjct: 46 MSTRR--AEDGHGAWQCDHGAQYFTARDPGFRAEVDRWQQAGVAALWNARLASFDGSAWT 103
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESK 94
+ + ++VG P M S L G ++
Sbjct: 104 TPHTPLE----RFVGTPRMTSPAAWLVQHLGDRAR 134
>gi|318041924|ref|ZP_07973880.1| hypothetical protein SCB01_09444 [Synechococcus sp. CB0101]
Length = 398
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
Query: 13 EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM--NK 70
++ +HGAP F +T + L+ GG + ++ +GS D + I D +
Sbjct: 58 QLALNHGAPLFNITASPEPQLLEPLRRGGWITRFQGAIGSLDEHGQLGAAIANDPLCSGT 117
Query: 71 KYVGVPGMNSICKAL--CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+ G P M+ +C+ L Q + G N W++ G G++L + +V
Sbjct: 118 LWQGSPQMDHVCRGLLALAQEAAPTPLISGTLVRHLEATSNGWTLRGQQGETLLHCSWLV 177
Query: 129 ASDKNVVSPRFRDVTG 144
S + PR + V G
Sbjct: 178 LSGTLLAHPRCQTVFG 193
>gi|323455686|gb|EGB11554.1| hypothetical protein AURANDRAFT_61838 [Aureococcus anophagefferens]
Length = 387
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
S R+T +DG + HGAP F VT + AL+ +G V K +G+ V F
Sbjct: 49 SATRKTRDDGR-VAISHGAPSFKVTTHKFRALLDGLPAGTTVPLPK-PVGAL--VGDAF- 103
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
+ + + G G ++C AL G + +F V E D W++ G DG L
Sbjct: 104 ---EPDGDDRRAGAGGAAALCDALLRDSGADPRFRSMVRGIERTGD-GAWALRGTDGAEL 159
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLD-------LTFAPDLAVKLEEIPVNPCFALML 174
G+F+ + S V R+ G PPL + + P A+ML
Sbjct: 160 GRFDWLAVSGSGVAHDRWTATFGGEPPLKAAAASLGDAALDAAIAAVNGVASKPVMAVML 219
Query: 175 AF 176
AF
Sbjct: 220 AF 221
>gi|307946411|ref|ZP_07661746.1| FAD dependent oxidoreductase [Roseibium sp. TrichSKD4]
gi|307770075|gb|EFO29301.1| FAD dependent oxidoreductase [Roseibium sp. TrichSKD4]
Length = 319
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 35/184 (19%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T N++ FDHGA + T + L+ E + +EW + DR
Sbjct: 42 RLATRRAENDLQFDHGAQYITAKTDGFQRLLAELTANCAASEWHMG----DRTG------ 91
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
VG P MN++ KAL + + V +E + WSVS DG +
Sbjct: 92 --------VVGTPSMNALAKALADGLTIRRQTQV----TSVMETGSTWSVSTGDGTL--E 137
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSD 183
F+ ++ + +P+ + G P L+ ++ + + PC+ LM+AF + +
Sbjct: 138 FDRLIIT---APAPQTMALLGNDHP--------LSKQIAHVSLLPCWTLMVAFDKAPALA 186
Query: 184 PSYQ 187
+Y
Sbjct: 187 ATYH 190
>gi|387906122|ref|YP_006336459.1| FAD dependent oxidoreductase [Burkholderia sp. KJ006]
gi|387581014|gb|AFJ89728.1| FAD dependent oxidoreductase [Burkholderia sp. KJ006]
Length = 348
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGAP+FT + +A V W + G A W+ + S + + + +YVGVP
Sbjct: 58 DHGAPYFTAQHPAFVAEVARWVASGAAAPWEARVASIGSLGPRALLAPA----LRYVGVP 113
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM++ + L G+ + + E + D + W + + L + V V
Sbjct: 114 GMSAPARRL--SAGIRTLCETAI--VELIRDGDCWRATSAEHGVLDAHHDAVI----VAV 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLN 192
P + V PL P LAV + + + +M A L DP + +++N
Sbjct: 166 PAPQAV-----PLLRHAEPSLAVIAQRSEMRATWTVM-AQCRGL-PDPGFDAAFVN 214
>gi|359782592|ref|ZP_09285812.1| amine oxidase, flavin-containing protein [Pseudomonas
psychrotolerans L19]
gi|359369412|gb|EHK69983.1| amine oxidase, flavin-containing protein [Pseudomonas
psychrotolerans L19]
Length = 328
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + + EW G AEW L + ++
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFIDALNEWRRAGCAAEWNPVLYQY---RDGRLSPS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
QD ++VGVP M++I + L V + E W + G++ G F
Sbjct: 97 QD-EQPRWVGVPRMSAITRHLLADLPVTFDCRI----TEVFRGAQHWHLLDASGETHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
VV + + +P+ + L+ P LA + + + P +++ LAF PL +
Sbjct: 152 AQVVIA---MPAPQATAL--------LSSVPKLAATVAGVSMEPTWSVALAFPTPLQT 198
>gi|418521633|ref|ZP_13087675.1| hypothetical protein WS7_11522 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410702168|gb|EKQ60677.1| hypothetical protein WS7_11522 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 344
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 20/177 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 120
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + + V+ + V +
Sbjct: 121 EMPAPARTLAAQLDVRLCAEVHALR----RSRQGWRVSVSQDAAEPLLDTVLLA---VPA 173
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLNV 193
P + + P T A E++ + P +A+M F P +DP Y ++N
Sbjct: 174 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAP--TDPGYDALFVNA 221
>gi|408376661|ref|ZP_11174265.1| hypothetical protein QWE_03693 [Agrobacterium albertimagni AOL15]
gi|407749351|gb|EKF60863.1| hypothetical protein QWE_03693 [Agrobacterium albertimagni AOL15]
Length = 329
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM------- 68
FDHGA +FT + A + + G + W K ++ DG+
Sbjct: 50 FDHGAQYFTARSPAFKAAAEQAVAQGHASIWP----------KAVHALKADGLVTDTRPT 99
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+Y+G+PGM+ L G++ + V R D W ++ + + LG+F+ V+
Sbjct: 100 EPRYIGLPGMSGFANGLAE--GLDIRKEATVARLAASRDD--WVLTDNEDKDLGRFDLVI 155
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPD---LAVKLEEIPVNPCFALMLAFSEPLSSDPS 185
++ P P + P+ L+ + ++ CF LM+ PL+ P
Sbjct: 156 STA--------------PAPQTIRLMPEAFSAHAALKAVEMSGCFTLMIGLDAPLA--PG 199
Query: 186 YQISYLN 192
++ + +
Sbjct: 200 FEAARIE 206
>gi|422631803|ref|ZP_16696983.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330941664|gb|EGH44440.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 328
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|402699635|ref|ZP_10847614.1| FAD dependent oxidoreductase [Pseudomonas fragi A22]
Length = 328
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V++W++ G AEW+ +L ++ + +
Sbjct: 40 RMSSKRSDAGSLDLGAQYFTARDRRFVDEVQQWQALGWAAEWEPHL--YNHKNGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VG P M++I + + V F + + + W + D S G +
Sbjct: 98 DE--QTRWVGSPRMSAITRGMLGHFKV--NFACRITDL--IRGEKHWHLLDADEVSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVIVA---TPAPQATAL--------LACAPKLASTAAGVKMDPTWAVALAFDTPLET 198
>gi|338999058|ref|ZP_08637713.1| amine oxidase [Halomonas sp. TD01]
gi|338764079|gb|EGP19056.1| amine oxidase [Halomonas sp. TD01]
Length = 354
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 69/184 (37%), Gaps = 28/184 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ D GA FTV N V EW++ G VA W + + + +
Sbjct: 52 RMSSKRRPSAALDLGAQAFTVRNERFANKVAEWQTAGCVAIWPTS--RYQASASGWQTHN 109
Query: 65 QDGMNKKYVGVPGMNSICKALCHQ----PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
D + +Y G P M+++ + L P + F+ + W + +G
Sbjct: 110 DDQL--RYTGAPRMSAVTRHLADTLNALPNAAITLETHITAFD--KTAAGWQLHDTNGSI 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPP----LDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G F+ VV S PPP L + P L+ E P C+A + F
Sbjct: 166 HGPFDVVVIS--------------APPPQAKALLAEWEPTLSAACEAKPQRGCWAGWVIF 211
Query: 177 SEPL 180
+PL
Sbjct: 212 EKPL 215
>gi|359785438|ref|ZP_09288589.1| amine oxidase [Halomonas sp. GFAJ-1]
gi|359297170|gb|EHK61407.1| amine oxidase [Halomonas sp. GFAJ-1]
Length = 339
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 10/130 (7%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA FTV + V+EW+ G A W N + S +
Sbjct: 36 RMSSKRRPQATLDLGAQAFTVRDPRFAQAVKEWQLAGCAALWPAN--RYQASSSGWQTHN 93
Query: 65 QDGMNKKYVGVPGMNSICK----ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
D + +Y G P M++I + AL P F + FE D W + G +
Sbjct: 94 DDQL--RYAGAPRMSAITRHMAEALSSLPNTTLAFETPIAAFEKTSDG--WQLIDQHGAT 149
Query: 121 LGQFNGVVAS 130
G F V+ S
Sbjct: 150 YGPFAAVIIS 159
>gi|436837502|ref|YP_007322718.1| hypothetical protein FAES_4125 [Fibrella aestuarina BUZ 2]
gi|384068915|emb|CCH02125.1| hypothetical protein FAES_4125 [Fibrella aestuarina BUZ 2]
Length = 345
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 40/184 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R D DHGA +F+ + ++ ALV W++ GLV EW + D S +
Sbjct: 58 RRLGRDAEASRADHGAQYFSARSPELQALVHNWQAQGLVQEWHIE--QSDPASFQ----- 110
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQ 123
+ +Y GM+ + K L G++ + G R +L + W V G +L
Sbjct: 111 ----HPRYAVTGGMSQLAKQLAQ--GLDVRTGE---RATYLTQTDTGWQVRCDSGLTL-- 159
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEE--------IPVNPCFALMLA 175
++D +++ P P + + V L E I PC A+ML
Sbjct: 160 -----SADALLLT--------LPAPQAIALLNESGVTLAEADQQALTSIHYEPCLAVMLR 206
Query: 176 FSEP 179
++P
Sbjct: 207 LNQP 210
>gi|388547194|ref|ZP_10150462.1| FAD dependent oxidoreductase [Pseudomonas sp. M47T1]
gi|388274769|gb|EIK94363.1| FAD dependent oxidoreductase [Pseudomonas sp. M47T1]
Length = 328
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G V EWK L F+ S+ V
Sbjct: 40 RASSKRSDAGSLDLGAQYFTARDRRFVDQVQRWQTSGCVEEWKPQL--FN--SQGGVLSP 95
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++VG P M +I KA+ + + FG + E K+ W + +G S G F
Sbjct: 96 SPDEQTRWVGTPRMGAIAKAMLGD--MNAVFGCRI--TEVFRGKHHWHLLDAEGCSHGPF 151
Query: 125 NGVV 128
+ V+
Sbjct: 152 SHVI 155
>gi|386021221|ref|YP_005939245.1| amine oxidase, flavin-containing [Pseudomonas stutzeri DSM 4166]
gi|327481193|gb|AEA84503.1| amine oxidase, flavin-containing [Pseudomonas stutzeri DSM 4166]
Length = 346
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++ G V +W L F +
Sbjct: 59 RMASKRSDAGSLDLGAQYFTARDRRFAETVRQWQARGWVDQWTPTL--FQSRDGQLSPSA 116
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ G S G F
Sbjct: 117 DEQL--RWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQYWTLVDATGASHGPF 170
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 171 SHVVIALPAPQA-----------AALLSGAPKLAAVAASVAMEPTWAVALGFATPLDT 217
>gi|294667313|ref|ZP_06732532.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602865|gb|EFF46297.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 336
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + DHGA +FT + A+V W G+ A W+ + S+D + +
Sbjct: 45 RTRHYSAEQWQCDHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----R 100
Query: 65 QDGMNKKYVGVPGMNSICKALCHQ 88
+YVGVP M + + L Q
Sbjct: 101 PQSALTRYVGVPEMTAPARTLAAQ 124
>gi|423689842|ref|ZP_17664362.1| FAD dependent oxidoreductase [Pseudomonas fluorescens SS101]
gi|388000846|gb|EIK62175.1| FAD dependent oxidoreductase [Pseudomonas fluorescens SS101]
Length = 328
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRI--TEVFQGTQHWNLLDADGGNHGPF 151
Query: 125 NGVV 128
+ V+
Sbjct: 152 SHVI 155
>gi|422587420|ref|ZP_16662091.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873291|gb|EGH07440.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 328
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPQLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +GQ+ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDMPVSFSCRI--TEVFRGEEHWNLLDAEGQNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|205372695|ref|ZP_03225506.1| putative deoxyribodipyrimidine photolyase [Bacillus coahuilensis
m4-4]
Length = 320
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 35/162 (21%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFTV D+ + V EW S G V EW + K++
Sbjct: 52 DHGAQFFTVRTEDLQSEVNEWLSHGWVREWYRD------------------PYPKFIAPE 93
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMNS+ K L V+ + V E K L S + + +F G +K +V+
Sbjct: 94 GMNSLIKRLSKSLPVKLRSKV-------TEVKKLDSYVEVLTEDGKRFQG----EKLIVT 142
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE 178
P +DL KL EIP N C+ ++ +E
Sbjct: 143 APL------PQTIDLVQEIGQVDKLLEIPYNACYVGIIRCAE 178
>gi|422651899|ref|ZP_16714689.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964972|gb|EGH65232.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 328
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWAPQLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +GQ+ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDMPVSFSCRI--TEVFRGEEHWNLLDAEGQNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|335436715|ref|ZP_08559508.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
gi|335437381|ref|ZP_08560161.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
gi|334896167|gb|EGM34322.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
gi|334897678|gb|EGM35809.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
Length = 335
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S N +FD GA + V + D+ +VR+ LV E + + FD + V
Sbjct: 37 RMASRRRNGCVFDFGANYLEVGDPDLEEIVRDAARSDLV-EIEPPVWRFDAAGE--VTAG 93
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ N ++ G G++ I + + G K GVGV E L+D W ++ +G +F
Sbjct: 94 ETPQNSRWTGRGGLDEIVRGMIDASGATLKEGVGVTHLERLDDG--WRLTTEEGDR--EF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
+ VV + + + PL +LA+ + +IP + L F+
Sbjct: 150 DEVVLAVPTASASVLLETADWDAPL----REELAIAINQIPYRTMDTVALHFA 198
>gi|424924867|ref|ZP_18348228.1| NAD/FAD-dependent oxidoreductase [Pseudomonas fluorescens R124]
gi|404306027|gb|EJZ59989.1| NAD/FAD-dependent oxidoreductase [Pseudomonas fluorescens R124]
Length = 328
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSEGWVAEWTPQLYTF---QGGKLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQIRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVFRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT 198
>gi|260222875|emb|CBA32880.1| hypothetical protein Csp_B16240 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 347
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN----LGSFDRVSKKFVNIQQDGMNKK 71
FDHGA +FTV + ++ + GL W N L S RV+ + G +
Sbjct: 53 FDHGAQYFTVRDARFTQALQT--TPGLCRPWSANTVRVLDSHGRVAAAAL----PGRDAH 106
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL----WSV--SGLDGQS--LGQ 123
+V PGMN++ +A +P +++ + R LE +L W + SG G + G
Sbjct: 107 WVPAPGMNALLRAWA-KPLLDAGQLLVNTRVTALEQDSLHKKKWQLRTSGDAGTNHVYGG 165
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
F+ V+ + + P+ +++ P LA K ++ V PC+ LMLA+ + +
Sbjct: 166 FDEVILA---IPHPQAQELLATTPK-----GAALAKKTSKVSVAPCWTLMLAYPQAV 214
>gi|425456990|ref|ZP_18836696.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
gi|389801784|emb|CCI19099.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
Length = 314
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF TV AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTVQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVNRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M + + L +
Sbjct: 141 SVIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYGDSLPAVT 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTAIAWLGL 200
>gi|134291313|ref|YP_001115082.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
gi|134134502|gb|ABO58827.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
Length = 351
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGAP+FT + +A V W + G A W+ + S + + + +YVGVP
Sbjct: 61 DHGAPYFTAQHPAFVAEVARWVASGAAAPWEARVASIGALGPRALLAPA----LRYVGVP 116
Query: 77 GMNSICKAL 85
GM++ + L
Sbjct: 117 GMSAPAQRL 125
>gi|397169902|ref|ZP_10493329.1| FAD dependent oxidoreductase [Alishewanella aestuarii B11]
gi|396088430|gb|EJI86013.1| FAD dependent oxidoreductase [Alishewanella aestuarii B11]
Length = 322
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TS+ E D GA +FT + +A V++W+ G+VA W + F V+ K +
Sbjct: 38 RMTSKRSAEGYLDLGAQYFTARHPAFMAQVQQWQQQGVVAPWLAAMSQF--VAGKL--LP 93
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++VGVP M+S + L G++ + + R W +D + W + GQ G F
Sbjct: 94 SPDAQLRFVGVPAMHSPLRQLAQ--GLDIHYQCQLQRI-WQQD-HYWWLQDTTGQDYGPF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAP-DLAVKLEEIPVNPCFALMLAFSEPLSS- 182
+ VV + PP P + + L + + PC+A+ L + P S
Sbjct: 150 SQVVLT--------------VPPQQAAALLPAEFSTLLPQQILTPCWAVDLQLTRPSGSN 195
Query: 183 -------DPSYQISYL 191
DP +S+L
Sbjct: 196 VGGIFVKDPQLPLSWL 211
>gi|330502054|ref|YP_004378923.1| FAD dependent oxidoreductase [Pseudomonas mendocina NK-01]
gi|328916340|gb|AEB57171.1| FAD dependent oxidoreductase [Pseudomonas mendocina NK-01]
Length = 328
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G VAEW+ +L N Q
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQARGWVAEWQPSL----------YNAQ 89
Query: 65 QDGMNK------KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG 118
++ ++VG P M++I +A+ + +F + E + WS+ DG
Sbjct: 90 DGQLSASPDEQVRWVGSPRMSAITRAML--GALPVRFSCRI--TEVFRGDHYWSLLDADG 145
Query: 119 QSLGQFNGVVAS 130
+S G ++ V+ +
Sbjct: 146 KSHGPYSHVIVA 157
>gi|383645219|ref|ZP_09957625.1| deoxyribodipyrimidine photolyase [Sphingomonas elodea ATCC 31461]
Length = 315
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR DG ++ FDHGA +FTV ++ V++W++ G+ + W
Sbjct: 39 MSTRR-VELDGEQLQFDHGAQYFTVRDDRFRRQVQDWQTQGVASPW-------------- 83
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALC 86
Q+ +VG P MN+ + +
Sbjct: 84 ----QEAGPDAWVGTPAMNAPVRRMA 105
>gi|334131047|ref|ZP_08504816.1| FAD dependent oxidoreductase [Methyloversatilis universalis FAM5]
gi|333443876|gb|EGK71834.1| FAD dependent oxidoreductase [Methyloversatilis universalis FAM5]
Length = 337
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEW-KVNLGSFDRVSKKFVNI 63
R + + FDHGA F +V + + A + EW+ G++A W + +G
Sbjct: 39 RMATRVAGRLRFDHGAQFMSVRGDAMRARLPEWQQAGVLARWPQAAVGD----------- 87
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESK---FGVGVGRFEWLEDKNLWSVSGLDGQS 120
++++V VPGMN++ + ++ +G RF W ++ G
Sbjct: 88 -----SERWVAVPGMNALAPRMLWGAEFSAQTLIHTLGADRFGWW-------LAEESGTL 135
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
F+ V+ + + +P+ + R L D + +I PC+ LML+ SE L
Sbjct: 136 PDCFDAVLVT---LPAPQAVTLFERSTGAGLARFID---AMRQIRYAPCWTLMLSLSERL 189
>gi|427428587|ref|ZP_18918627.1| hypothetical protein C882_4338 [Caenispirillum salinarum AK4]
gi|425881695|gb|EKV30379.1| hypothetical protein C882_4338 [Caenispirillum salinarum AK4]
Length = 339
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWK---VNLG--SFDR 55
++ RR +EDG + FDHGA + T + A + G A W LG F R
Sbjct: 47 LATRR--AEDG-ALTFDHGAQYATARDPAFRAALEAAAEAGTAAPWDGRWAMLGEEGFTR 103
Query: 56 VSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG 115
VS ++VG PGM+ + KAL V GV + + + LW ++
Sbjct: 104 VSAS---------ETRWVGRPGMSGLVKALAADVAVTQ--GVRITALD-RDAAGLWRLTD 151
Query: 116 LDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
DG++ G ++ V + +P+ R++ G + F L + PC+A M A
Sbjct: 152 ADGRTHGPYHAVALT---APAPQAREMLGE---WEAAFP-----ALSRVRYAPCWAAMAA 200
Query: 176 FSEPL 180
+ PL
Sbjct: 201 WEAPL 205
>gi|443326788|ref|ZP_21055430.1| putative NAD/FAD-dependent oxidoreductase [Xenococcus sp. PCC 7305]
gi|442793581|gb|ELS03026.1| putative NAD/FAD-dependent oxidoreductase [Xenococcus sp. PCC 7305]
Length = 341
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 18/179 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR + E +FD+GA FTV++ V EW +V W S D
Sbjct: 52 LATRRIEHSEAVEGIFDYGAQHFTVSDPKFQVWVDEWLKKDIVEAWNKGFPSVDG----- 106
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
NIQQ+ Y GV +I K L + V + + + W++ +G +
Sbjct: 107 -NIQQENQ-VYYRGVVSNRNIAKYLSQELDVHTSTKI----INLNRQNSQWNLEADNGAN 160
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
D +++ ++ AP++ +LE+I + C A++ +P
Sbjct: 161 F-------VGDILIMTAPIPQSLALLDSSHISLAPEIRDRLEQIVYHKCIAILALLDKP 212
>gi|425448182|ref|ZP_18828161.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
gi|389731111|emb|CCI04798.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
Length = 325
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + E+ DHG PF T+ AL+ LV W FD
Sbjct: 47 RRVNRANQEIAVDHGLPFLTIQGEKTAALIDNLLRENLVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M +++ L +
Sbjct: 141 SVIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYADSLPAVT 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTAIAWLGL 200
>gi|399002470|ref|ZP_10705156.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM18]
gi|398124910|gb|EJM14406.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM18]
Length = 328
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VA W L ++ + +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWVAVWTPQLYTYHGGQLRPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL +E +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLGD--LEVQFSCRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVVIATP---APQATAL--------LPAAPKLAGAAAGVKMEPTWAVALAFDTPLDT 198
>gi|422303561|ref|ZP_16390912.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791449|emb|CCI12731.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 314
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ + +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLTDNIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E ++K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAKGLEIERDF--LVTRLENRQEK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M + + L +
Sbjct: 141 SVIVLA---IPAPQAALLLENSL---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
P+ I++L +
Sbjct: 191 PATDIAWLGL 200
>gi|440739056|ref|ZP_20918578.1| hypothetical protein A986_12259 [Pseudomonas fluorescens BRIP34879]
gi|440380428|gb|ELQ16995.1| hypothetical protein A986_12259 [Pseudomonas fluorescens BRIP34879]
Length = 328
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V FG + + + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPV--TFGCRITDV--FQGEQHWNLLDADGGNHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ V+ + +P + L AP LA + ++P +A+ LAF +PL +
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT 198
>gi|294055434|ref|YP_003549092.1| fumarate reductase/succinate dehydrogenase flavoprotein
domain-containing protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614767|gb|ADE54922.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
protein [Coraliomargarita akajimensis DSM 45221]
Length = 326
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFTV V EW + G++ EW R SK V+ DG + +YVGV
Sbjct: 55 DHGAQFFTVREQRFRGYVDEWLNAGVIREWF-------RHSK--VDHHPDG-HPRYVGVD 104
Query: 77 GMNSICKALC 86
GM+++ K L
Sbjct: 105 GMHAVPKFLA 114
>gi|404399157|ref|ZP_10990741.1| oxidoreductase [Pseudomonas fuscovaginae UPB0736]
Length = 328
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQAQGWVAEWDPKLYTWQNGQ---LNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L + + S F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLLGE--LSSHFSCRI--TEVFRGEQHWHLQDSEGVTYGPF 151
Query: 125 NGVV 128
+ VV
Sbjct: 152 SHVV 155
>gi|407768954|ref|ZP_11116331.1| FAD dependent oxidoreductase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407287874|gb|EKF13353.1| FAD dependent oxidoreductase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 341
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 47/198 (23%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR +E GN F+HGA + T + A +R S +W+ NL + ++
Sbjct: 42 LATRR--TEFGN---FNHGAQYVTARDPAFRAFLRHAASQNSARDWRPNLYHGQQAQRQQ 96
Query: 61 V-NIQQDGMNKK---YVGVPGMNSICKALCHQPGVESKFGVGV----GRFEWLEDKNLWS 112
DG Y G P MN + L + ++ + G E++ NL
Sbjct: 97 TPRPIADGNTAADIWYQGAPLMNKLVTPLLTSFEIRTRHHINRIEPHGPREFILHNNL-- 154
Query: 113 VSGLDGQSLGQFNGVVASDK--------NVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI 164
GQ G F+GV+A+ +SPRF DV + +
Sbjct: 155 -----GQEFGPFDGVIATAPAPQAAELLQPLSPRF-DV------------------INNV 190
Query: 165 PVNPCFALMLAFSEPLSS 182
+ PC++ M+AF+ PL +
Sbjct: 191 KIAPCWSAMIAFANPLPT 208
>gi|384427195|ref|YP_005636553.1| hypothetical protein XCR_1536 [Xanthomonas campestris pv. raphani
756C]
gi|341936296|gb|AEL06435.1| conserved hypothetical protein [Xanthomonas campestris pv. raphani
756C]
Length = 326
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + G + DHGA +FT + D +A V W + A W L S+D + +
Sbjct: 36 RMRALAGQQWHCDHGAQYFTARDPDFMAAVGAWVANDCAAPWLARLASWDGSTLQ----P 91
Query: 65 QDGMNKKYVGVPGMNSICKAL 85
G +++VGVP M + AL
Sbjct: 92 SLGTLQRFVGVPDMAAPAHAL 112
>gi|237799746|ref|ZP_04588207.1| amine oxidase, flavin-containing protein, partial [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022601|gb|EGI02658.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 281
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G++ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDLPVSFSCRIA--EVFRGEEHWNLLDAEGKNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQASA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|114570835|ref|YP_757515.1| FAD dependent oxidoreductase [Maricaulis maris MCS10]
gi|114341297|gb|ABI66577.1| FAD dependent oxidoreductase [Maricaulis maris MCS10]
Length = 314
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 34/170 (20%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKY-VG 74
FDHGA + T + A + + + GL A W +Q GM + + VG
Sbjct: 50 FDHGAQYVTARDAGFAAWLDQAAATGLAAPW-----------------EQLGMEQTWWVG 92
Query: 75 VPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNV 134
PGM+ + L G+E + V +D W V+ +G+ VA +
Sbjct: 93 APGMSKLVAPLAE--GLEIRNPCRVETVG--QDGEGWLVACENGEMFQADRLAVA----I 144
Query: 135 VSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDP 184
+P+ + + L+ LA +L+ + PC+ LML+ +EPL P
Sbjct: 145 PAPQAKTL--------LSGVTPLADRLDAVRYAPCWTLMLSLAEPLEQAP 186
>gi|440752549|ref|ZP_20931752.1| FAD dependent oxidoreductase family protein [Microcystis aeruginosa
TAIHU98]
gi|440177042|gb|ELP56315.1| FAD dependent oxidoreductase family protein [Microcystis aeruginosa
TAIHU98]
Length = 314
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + E+ DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEIAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M + + L +
Sbjct: 141 SAIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|21230738|ref|NP_636655.1| hypothetical protein XCC1281 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769266|ref|YP_244028.1| hypothetical protein XC_2960 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992417|ref|YP_001904427.1| hypothetical protein xccb100_3022 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112332|gb|AAM40579.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574598|gb|AAY50008.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734177|emb|CAP52385.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 335
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G + DHGA +FT + D +A V W + A W L S+D + + G +
Sbjct: 51 GQQWHCDHGAQYFTARDPDFMAAVGAWVANDCAAPWLARLASWDGSTLQ----PSLGTLQ 106
Query: 71 KYVGVPGMNSICKAL 85
++VGVP M + AL
Sbjct: 107 RFVGVPDMAAPAHAL 121
>gi|385331507|ref|YP_005885458.1| FAD dependent oxidoreductase [Marinobacter adhaerens HP15]
gi|311694657|gb|ADP97530.1| FAD dependent oxidoreductase [Marinobacter adhaerens HP15]
Length = 342
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 27/176 (15%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA +FT N D L + ++ W+ G F + K+ + Q+ +YVG+P
Sbjct: 61 DMGAQYFTSRNPDFLPFLHKFAGPESFGPWEGRFG-FQTNADKWESFPQE---TRYVGIP 116
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M +I +AL V ++ V R + WS+ G LG F+ V+ V +
Sbjct: 117 RMTAITRALSGHAHVVTE--TRVARLA--RNDQSWSLFSTAGSHLGDFDAVI-----VTA 167
Query: 137 P--RFRDVTGRPPPLDLTFAPDLAVKLEEIPVN---PCFALMLAFSEPLSSDPSYQ 187
P + RD+ L + LA L++ PV+ PC+A+ F P+S P ++
Sbjct: 168 PPAQARDL------LADSSLDALASYLDD-PVSRVLPCWAVAAHF--PVSPWPHHE 214
>gi|443646857|ref|ZP_21129535.1| FAD dependent oxidoreductase [Microcystis aeruginosa DIANCHI905]
gi|159028881|emb|CAO90686.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335686|gb|ELS50150.1| FAD dependent oxidoreductase [Microcystis aeruginosa DIANCHI905]
Length = 314
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF TV AL+ +V W FD
Sbjct: 47 RRVNRANREMAVDHGLPFLTVQGEKTAALIDNLLREHIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVNRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M + + L +
Sbjct: 141 SLIVLA---IPAPQAALLLENSC---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVT 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTAIAWLGL 200
>gi|425460187|ref|ZP_18839669.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9808]
gi|389827182|emb|CCI21777.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9808]
Length = 314
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF TV AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTVQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L G+E V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQ--GLEIDRDFLVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M + + L +
Sbjct: 141 SVIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|422648207|ref|ZP_16711331.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330961745|gb|EGH62005.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 328
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDLPVSFSCRITDV--FRGEEHWNLLDAEGKSHG 149
Query: 123 QFNGVV 128
F+ V+
Sbjct: 150 PFSHVI 155
>gi|85374513|ref|YP_458575.1| transmembrane protein [Erythrobacter litoralis HTCC2594]
gi|84787596|gb|ABC63778.1| putative transmembrane protein [Erythrobacter litoralis HTCC2594]
Length = 310
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 63/172 (36%), Gaps = 36/172 (20%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G + FDHGA +FT + + V W S G A W D
Sbjct: 50 GETVTFDHGAQYFTARDPRFVEAVEGWTSAGFAAPWP------------------DAGED 91
Query: 71 KYVGVPGMNSICKALCHQPGVESKFGV-GVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
YVG PGMN+ K + V+ + G+ L D+ W + + +
Sbjct: 92 AYVGTPGMNAPIKQMAQFFNVQWNTRIDGI-----LRDELGWHL---------RAENTIF 137
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+N+V + L A D A + + PC+ALM+ F PL+
Sbjct: 138 RAQNLVCAIPAEQAAE---LLEKQASDFAAQAAAVQSRPCWALMMGFDTPLA 186
>gi|399519486|ref|ZP_10760281.1| FAD dependent oxidoreductase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112582|emb|CCH36839.1| FAD dependent oxidoreductase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 328
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G VAEW+ +L N Q
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQARGWVAEWQPSL----------YNAQ 89
Query: 65 QDGMNK------KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG 118
++ ++VG P M++I +A+ + KF + E WS+ +G
Sbjct: 90 DGQLSASPDEQVRWVGCPRMSAITRAMLG--ALPVKFSCRI--TEVFRGDRYWSLLDAEG 145
Query: 119 QSLGQFNGVVAS 130
S G ++ V+ +
Sbjct: 146 NSHGPYSHVIVA 157
>gi|407939961|ref|YP_006855602.1| hypothetical protein C380_16345 [Acidovorax sp. KKS102]
gi|407897755|gb|AFU46964.1| hypothetical protein C380_16345 [Acidovorax sp. KKS102]
Length = 344
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR G DHGA +FT + A V W+ G+ A W L SFD
Sbjct: 46 MSTRRAEDAAGPWQC-DHGAQYFTARDPQFRAEVARWQQAGVAALWDARLASFDGA---- 100
Query: 61 VNIQQDGMNKKYVGVPGMNS 80
V +++VG P M S
Sbjct: 101 VWTTPATPLERFVGTPRMTS 120
>gi|443322975|ref|ZP_21051987.1| putative NAD/FAD-dependent oxidoreductase [Gloeocapsa sp. PCC
73106]
gi|442787279|gb|ELR97000.1| putative NAD/FAD-dependent oxidoreductase [Gloeocapsa sp. PCC
73106]
Length = 331
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR + + E + D+GAP FT + ALV +W L+ W S F
Sbjct: 43 LATRRLSHPEYGEGVIDYGAPHFTANGPEFKALVSQWLEQNLIKVW----------STGF 92
Query: 61 VNIQ-QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ 119
V+ Q Y G G +I K L V + V + W + N W Q
Sbjct: 93 VSSNGQIEETTYYCGREGNRAIAKHLAQNLNVHTN--TQVTKVVW--EANYWQAHTATDQ 148
Query: 120 SLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAV--KLEEIPVNPCFALM 173
+ + +++P P L+L + +LA+ KL E+ +PC A++
Sbjct: 149 -------IFTGEYLLLTPPV------PQSLELLKSLNLALPQKLTEVAYHPCIAVL 191
>gi|88798548|ref|ZP_01114132.1| FAD dependent oxidoreductase [Reinekea blandensis MED297]
gi|88778648|gb|EAR09839.1| FAD dependent oxidoreductase [Reinekea sp. MED297]
Length = 326
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 25/178 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ ++ DHG +FT + A V W+ G ++ W V R + +
Sbjct: 39 RLSTRRRDDWQVDHGTQYFTARSEQFKAEVDRWQQKGWISVWPVTPWKLGRETL----VP 94
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+YVG P MN++ L G+E + R E ++ W + G+ GQF
Sbjct: 95 SPDEQIRYVGSPTMNAMIHGLS--DGLEFYTRTRIDRLERVDGG--WRLWDEHGEQYGQF 150
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKL---EEIPVNPCFALMLAFSEP 179
+ V+ + P L P+ + L + ++P +A +A +P
Sbjct: 151 DAVLIT--------------APLAQSLALLPENSAALPAMKHARMSPTWATAIALDQP 194
>gi|407775765|ref|ZP_11123057.1| FAD dependent oxidoreductase [Thalassospira profundimaris WP0211]
gi|407281126|gb|EKF06690.1| FAD dependent oxidoreductase [Thalassospira profundimaris WP0211]
Length = 348
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 34/192 (17%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL-----------GSFDRVSKKFVNIQ 64
F+HGA + T + A ++E W NL + +++ N+
Sbjct: 55 FNHGAQYVTARDPGFNAFLQEATEFNAAQNWSPNLHRGTSAPAQSGAALSPIARHVGNLA 114
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ Y G P MN + + L ++ + + VG E ++ LDG + G F
Sbjct: 115 EEPW---YQGAPQMNKLIRPLVDTFPIQKQHRI-VG-IEPNGPRSFMLHDDLDG-TYGPF 168
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSD- 183
+GV+ + +P+ D+ PL +AP ++E+ + PC+A+M AF PL +
Sbjct: 169 DGVIVT---APAPQTADLLR---PLAPRYAP-----IDEVVMAPCWAVMAAFESPLPTGF 217
Query: 184 -----PSYQISY 190
PS +IS+
Sbjct: 218 DAMLYPSPEISW 229
>gi|352105731|ref|ZP_08960938.1| oxidoreductase [Halomonas sp. HAL1]
gi|350598308|gb|EHA14430.1| oxidoreductase [Halomonas sp. HAL1]
Length = 349
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 73/197 (37%), Gaps = 32/197 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ D GA F+V + D V W S G +A W + + S
Sbjct: 47 RMSSKRRPSATLDLGAQAFSVRDADFQRAVDTWLSIGCIASWPT---ATYQASPNGWQAH 103
Query: 65 QDGMNKKYVGVPGMNSICKALCHQ----PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
DG K+Y G P M+++ + L P G + + ++ W + G +
Sbjct: 104 NDG-QKRYAGAPRMSALTRHLADSLTALPQAALHTGTSITSLK--RNQKGWQLVAAGGMT 160
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPP----LDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G ++ VV S PPP L + DLA + C+A F
Sbjct: 161 HGPYDQVVIS--------------APPPQAHALLAMWDDDLATACQTRKQRACWAGWAIF 206
Query: 177 SEPLSS----DPSYQIS 189
PL + DP +Q++
Sbjct: 207 DGPLPAIPGVDPDWQMA 223
>gi|409397881|ref|ZP_11248739.1| amine oxidase, flavin-containing [Pseudomonas sp. Chol1]
gi|409117620|gb|EKM94047.1| amine oxidase, flavin-containing [Pseudomonas sp. Chol1]
Length = 328
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ FD GA +FT + ++ W+ G A W NL R + +
Sbjct: 41 RTASKQIESGSFDLGAQYFTARDRRFREALQHWQEEGWAAPWSPNL-YLSRAGQLEPSTD 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VG P M SI +AL V F + E + LW++ DG S G F
Sbjct: 100 E---QARWVGTPQMASIARALLGDLPV--TFSCRI--TEAFRGEELWTLVDADGASHGPF 152
Query: 125 NGVVAS 130
+ V+ +
Sbjct: 153 SHVIVA 158
>gi|418515630|ref|ZP_13081809.1| hypothetical protein MOU_02287 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707539|gb|EKQ65990.1| hypothetical protein MOU_02287 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 344
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + Q + +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD---GTRLRRSQSALT-RYVGVP 120
Query: 77 GMNSICKALCHQ 88
M + + L Q
Sbjct: 121 EMPAPARTLAAQ 132
>gi|126668272|ref|ZP_01739232.1| hypothetical protein MELB17_13722 [Marinobacter sp. ELB17]
gi|126627298|gb|EAZ97935.1| hypothetical protein MELB17_13722 [Marinobacter sp. ELB17]
Length = 358
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 67/172 (38%), Gaps = 35/172 (20%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDG-------MN 69
D G +FT N D L + + V W LG QQD
Sbjct: 68 DMGGQYFTTRNPDFLPFLHQHAGEQTVVPWHGLLG-----------YQQDNGDWSEFPAE 116
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
+YVG P M +I + L G+ + V R W + DGQ+LG F+ V+
Sbjct: 117 PRYVGAPRMTAITRGLS--AGLNVQAQTRVARLHRDSQVKKWHLQDADGQNLGAFDQVI- 173
Query: 130 SDKNVVSP--RFRDVTGRPPPLDLTFAPDLAVKLEEI--PVNPCFALMLAFS 177
+ +P + R++ L + A LA +L + PC+A+ + FS
Sbjct: 174 ----ITAPPAQAREL------LADSSAAQLATELNTAVSQILPCWAVAVKFS 215
>gi|114707631|ref|ZP_01440526.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
gi|114536875|gb|EAU40004.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
Length = 282
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 65/183 (35%), Gaps = 36/183 (19%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR +D + FDHGA FFT + V W G VA W
Sbjct: 1 MSTRRVDIDD-TCLQFDHGAQFFTARDPRFAKRVEGWVEAGHVARWP------------- 46
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWL-EDKNLWSVSGLDGQ 119
+G ++G P MN+ A+ V R E L D W L G
Sbjct: 47 -----EGQQDAWIGQPAMNAPLLAMAENLKVSVST-----RIETLTRDNGHWH---LHGG 93
Query: 120 SLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
+G+ A D VV+ P D T +A E PC+ +M AF
Sbjct: 94 GVGE----TAYDAVVVAVPAEQAVSLLAPQDAT----MAAYAESTRSKPCWTVMAAFDTR 145
Query: 180 LSS 182
+++
Sbjct: 146 VTA 148
>gi|408672459|ref|YP_006872207.1| amine oxidase [Emticicia oligotrophica DSM 17448]
gi|387854083|gb|AFK02180.1| amine oxidase [Emticicia oligotrophica DSM 17448]
Length = 318
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 25/174 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + E FDHGA +F+ D + + EW++ GS
Sbjct: 40 RLATRRAAEAKFDHGAQYFSTKTPDFQSFAENLIQKQIAKEWQLQEGS------------ 87
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + + +G+ GM+SI K L G+ K V E E N +SV G S +
Sbjct: 88 ANFRHARLIGIQGMSSIAKFLAE--GLSIKLSEKVIHIE--ETNNGFSVKTEAGNSF-EA 142
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE 178
++ + +P+ ++ L F P++A +L++I +PC A+M E
Sbjct: 143 KAIICT---APAPQAIELMTNS---HLNF-PEIA-QLQQIKYHPCIAVMANLKE 188
>gi|398992811|ref|ZP_10695772.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM21]
gi|398136267|gb|EJM25359.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM21]
Length = 328
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L ++ +
Sbjct: 40 RMSSKRSDAGALDLGAQYFTARDRRFVTEVQRWQTNGWAAEWTPQLYTYHGGQLSLSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPHMSAITRGLLGD--LEVQFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVV 128
+ VV
Sbjct: 152 SHVV 155
>gi|304321242|ref|YP_003854885.1| amine oxidase, flavin-containing [Parvularcula bermudensis
HTCC2503]
gi|303300144|gb|ADM09743.1| amine oxidase, flavin-containing [Parvularcula bermudensis
HTCC2503]
Length = 322
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 65/168 (38%), Gaps = 30/168 (17%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FDHG PF T ++ D A + W + G W + G D V+ VG
Sbjct: 58 FDHGTPFLTASHPDFQAQLERWIASGQAQNWPCSGG--DHVT---------------VGS 100
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M + + + GV FG + ED+ W V G+ LG A+D V+
Sbjct: 101 PHMRTPIEHAAQRLGV--LFGSRIAPLTRGEDRA-WPVLTETGEPLG------AADILVL 151
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSD 183
+ V L T LA + +PC+ M+ F+ PL +
Sbjct: 152 AIPAEQVAE----LLATVGGPLAQAASAVRSSPCWTTMVHFAAPLQGE 195
>gi|70732460|ref|YP_262222.1| FAD dependent oxidoreductase [Pseudomonas protegens Pf-5]
gi|68346759|gb|AAY94365.1| FAD dependent oxidoreductase [Pseudomonas protegens Pf-5]
Length = 328
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +
Sbjct: 40 RMSSKRSDAGSLDLGAQYFTARDRRFVTEVQRWQAKGWVAEWTPQL--YNSHGGQLSPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VG P M++I +AL +E+ F + E + W + +G + G F
Sbjct: 98 DE--QTRWVGTPRMSAITRALIGD--LEAHFACRI--TEVFRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVV 128
+ VV
Sbjct: 152 SHVV 155
>gi|90416921|ref|ZP_01224850.1| hypothetical protein GB2207_06658 [gamma proteobacterium HTCC2207]
gi|90331268|gb|EAS46512.1| hypothetical protein GB2207_06658 [gamma proteobacterium HTCC2207]
Length = 336
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 23/166 (13%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FDHGA F T N+ A V EW G+ EW + + +Y GV
Sbjct: 61 FDHGAQFMTARNSRFQASVAEWIEAGVAEEWYSSYPG------------HPNGHPRYRGV 108
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M ++ K L V V ++ LWS + +G+++ ++ S
Sbjct: 109 PTMTAVAKYLATDMNVLRTTRVD----SITQEDRLWSAALDNGETVSAKALLITSPV--- 161
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
P+ D+ ++ D +L+ I C A+M P +
Sbjct: 162 -PQTIDLLASG---NIQIPADKQARLDRIDYEACIAVMAVLDGPTA 203
>gi|358448961|ref|ZP_09159453.1| FAD dependent oxidoreductase [Marinobacter manganoxydans MnI7-9]
gi|357226756|gb|EHJ05229.1| FAD dependent oxidoreductase [Marinobacter manganoxydans MnI7-9]
Length = 342
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA +FT N D L +R++ WK G F+ ++++ ++ ++VG P
Sbjct: 61 DMGAQYFTSRNPDFLPFLRKFAGDETFEIWKGRFG-FETAAREWEPFPEEA---RFVGTP 116
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
M +I +AL + ++ VG + + WSV G LG F+ V+
Sbjct: 117 RMTAITRALSAHARLVAETRVG----KLARNDQSWSVFDDAGSHLGDFHQVI 164
>gi|78046940|ref|YP_363115.1| hypothetical protein XCV1384 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035370|emb|CAJ23015.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 331
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGV
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTQLR----RSQSALMRYVGVS 120
Query: 77 GMNSICKALCHQ 88
M + + L Q
Sbjct: 121 EMTAPARTLAAQ 132
>gi|421619012|ref|ZP_16059976.1| amine oxidase, flavin-containing [Pseudomonas stutzeri KOS6]
gi|409778808|gb|EKN58488.1| amine oxidase, flavin-containing [Pseudomonas stutzeri KOS6]
Length = 328
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++ G V +W NL F +
Sbjct: 41 RMASKRSDAGSLDLGAQYFTTRDRRFSETVRQWQTQGWVDQWSPNL--FQASEGQLRPSA 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ +G S G F
Sbjct: 99 DEQL--RWVGAPTMSAITRGLLGELPVTFNCRI----TEVFRGERFWTLVDANGASHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 153 SQVVIAAPAPQAAAL-----------LSAAPKLAAVAASVAMEPTWAVALGFATPLDT 199
>gi|289624745|ref|ZP_06457699.1| hypothetical protein PsyrpaN_06332 [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648374|ref|ZP_06479717.1| hypothetical protein Psyrpa2_11579 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|416014639|ref|ZP_11562389.1| hypothetical protein PsgB076_04863 [Pseudomonas syringae pv.
glycinea str. B076]
gi|416029108|ref|ZP_11571997.1| hypothetical protein PsgRace4_26606 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422406633|ref|ZP_16483657.1| hypothetical protein Pgy4_23281 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422584092|ref|ZP_16659207.1| hypothetical protein PSYAE_17033 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598309|ref|ZP_16672572.1| hypothetical protein PLA107_26430 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|320325706|gb|EFW81767.1| hypothetical protein PsgB076_04863 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320327375|gb|EFW83389.1| hypothetical protein PsgRace4_26606 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868914|gb|EGH03623.1| hypothetical protein PSYAE_17033 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330881869|gb|EGH16018.1| hypothetical protein Pgy4_23281 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330988589|gb|EGH86692.1| hypothetical protein PLA107_26430 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 328
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKAL 85
++VG PGM++I +A+
Sbjct: 97 ---PDEQVRWVGEPGMSAITRAM 116
>gi|298159722|gb|EFI00764.1| Amine oxidase, flavin-containing [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 328
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKAL 85
++VG PGM++I +A+
Sbjct: 97 ---PDEQVRWVGEPGMSAITRAM 116
>gi|257482024|ref|ZP_05636065.1| hypothetical protein PsyrptA_02082, partial [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 304
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 16 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 72
Query: 63 IQQDGMNKKYVGVPGMNSICKAL 85
++VG PGM++I +A+
Sbjct: 73 ---PDEQVRWVGEPGMSAITRAM 92
>gi|257053846|ref|YP_003131679.1| FAD dependent oxidoreductase [Halorhabdus utahensis DSM 12940]
gi|256692609|gb|ACV12946.1| FAD dependent oxidoreductase [Halorhabdus utahensis DSM 12940]
Length = 335
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR N +FD GA + V + D+ ++ + +G + E + + FD +
Sbjct: 38 MASRRR-----NGCVFDFGANYLEVADPDLEEVIED-AAGEKLVEIEPPVWRFDAAGE-- 89
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ N ++ G G++ I + + + G + GVGV E L+D W V+ G+
Sbjct: 90 ITPGDTPQNSRWTGRGGLDEIVRGMINASGATLEDGVGVTHLERLDDG--WRVTTEAGER 147
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
+F+ +V + + + PL +LA+++ +IP + L F+
Sbjct: 148 --EFDAIVLAVPTASASVLLETADWDAPL----REELAIEINQIPYRTMDTVALHFA 198
>gi|389877932|ref|YP_006371497.1| FAD dependent oxidoreductase [Tistrella mobilis KA081020-065]
gi|388528716|gb|AFK53913.1| FAD dependent oxidoreductase [Tistrella mobilis KA081020-065]
Length = 351
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 31/192 (16%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR T +DG + FDHGA F T + ++A + E+ L + +
Sbjct: 51 LATRRATLDDGTVLRFDHGAQFMTARSPALVAAMAGAEAANLARRLPAPPLHGPSLHGQP 110
Query: 61 VNIQQDGMNKKYVGVP------GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVS 114
++D ++VG P GM +I K L G++ + G VG + LW +
Sbjct: 111 PAPERD--QPRWVGQPHWVGMGGMTAIAKHLAQ--GLDIRTGTRVGGVV-RTGRGLWRLE 165
Query: 115 GLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAV------KLEEIPVNP 168
DG L Q ++ + PP L D+ + ++ V P
Sbjct: 166 DEDGLPLVQARRLIVTA--------------PPEQTLDLLIDVLLPEGWRRRIASTIVAP 211
Query: 169 CFALMLAFSEPL 180
C+ALMLA E L
Sbjct: 212 CWALMLAVDEAL 223
>gi|422297094|ref|ZP_16384738.1| amine oxidase [Pseudomonas avellanae BPIC 631]
gi|407991586|gb|EKG33409.1| amine oxidase [Pseudomonas avellanae BPIC 631]
Length = 288
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYV 73
D G +FT + V++W++ G VAEW L +F R+S ++V
Sbjct: 11 LDMGTQYFTARDRRFATAVKQWQAQGHVAEWTPQLYNFHGGRLSPS------PDEQVRWV 64
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKN 133
G PGM++I +A+ + + F + E + W++ +GQ+ G F+ V+
Sbjct: 65 GKPGMSAITRAM--RGDMPVSFSCRIT--EVFRGEEHWNLLDDEGQNHGPFSHVI----- 115
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 116 IATPAPQATAL------LAAAPKLASVVAGVKMDPTWAVALAFETPLQT 158
>gi|289678386|ref|ZP_06499276.1| amine oxidase, flavin-containing, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 217
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG GM++I +A+ + + F + + + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTLGMSAITRAM--RGDLPVSFSCRI--TDVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
>gi|398842544|ref|ZP_10599723.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM102]
gi|398904480|ref|ZP_10652323.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM50]
gi|398105641|gb|EJL95728.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM102]
gi|398175859|gb|EJM63599.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM50]
Length = 328
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 19/178 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VA W L +F + +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWVAVWTPQLYTFHGGQLRPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+ VV + +P + VK+E P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATA-LLAAAPKLAGAAAGVKME-----PTWAVALAFDTPLET 198
>gi|399008565|ref|ZP_10711035.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM17]
gi|398116001|gb|EJM05772.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM17]
Length = 327
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWAPQLYNFHGGQLTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L + E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGE--TEVHFACRI--TEVYRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVV 128
+ V+
Sbjct: 152 SHVI 155
>gi|389685948|ref|ZP_10177271.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis O6]
gi|388550290|gb|EIM13560.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis O6]
Length = 327
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWAPQLYNFHGGQLTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L + E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGE--TEVHFACRI--TEVYRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVV 128
+ V+
Sbjct: 152 SHVI 155
>gi|419954807|ref|ZP_14470942.1| amine oxidase, flavin-containing [Pseudomonas stutzeri TS44]
gi|387968420|gb|EIK52710.1| amine oxidase, flavin-containing [Pseudomonas stutzeri TS44]
Length = 328
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 19/179 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ FD GA +FT + ++ W+ G A W NL R + +
Sbjct: 41 RTASKQIESGSFDLGAQYFTARDRRFREALQHWQDEGWAAPWAPNL-YLSRAGQLEPSTD 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VG P M SI +AL V F + E + LW++ +G S G F
Sbjct: 100 E---QLRWVGTPQMASIARALLGDLPV--TFSCRI--TEAFRGEELWTLVDANGASHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSD 183
+ V+ V +P + L AP LA + + P +A+ L FS PL ++
Sbjct: 153 SQVI-----VATPAPQASA------LLAAAPKLAAVAASVAMEPAWAVALGFSTPLPTE 200
>gi|425901484|ref|ZP_18878075.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883125|gb|EJK99611.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 327
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWAPQLYNFHGGQLTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L + E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGE--TEVHFACRI--TEVYRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVV 128
+ V+
Sbjct: 152 SHVI 155
>gi|297183024|gb|ADI19170.1| predicted NAD/FAD-dependent oxidoreductase [uncultured delta
proteobacterium HF0130_05G09]
Length = 319
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 27/181 (14%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D E +D+GA FFTV + + V EWE V W F N DG N
Sbjct: 45 DNKEFRYDYGAQFFTVRSEEFGDQVSEWEMKKHVKVW----------CNGFEN--NDGHN 92
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
+Y+ GM + K + G++ + V + E+L+D W + G S F
Sbjct: 93 -RYMSTNGMRDLLKNIS--SGLKIQQNQKVAKIEYLDD--YWRL----GTSRANF----E 139
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSDP--SYQ 187
S+ V++ + + + D ++++I C AL++ + D +YQ
Sbjct: 140 SELLVITTPLPQCVELLKTIPIFYHHDSLDEIKKIEYKKCIALIMTMGSESNFDSPGAYQ 199
Query: 188 I 188
+
Sbjct: 200 M 200
>gi|166365146|ref|YP_001657419.1| hypothetical protein MAE_24050 [Microcystis aeruginosa NIES-843]
gi|425465389|ref|ZP_18844698.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|166087519|dbj|BAG02227.1| hypothetical protein MAE_24050 [Microcystis aeruginosa NIES-843]
gi|389832390|emb|CCI24050.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 314
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 37/190 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + + DHG PF T+ AL+ LV W FD
Sbjct: 47 RRVNRVNQVIAVDHGLPFLTIQGEKTAALIDNLLRENLVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E ++K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAKGLEIERDF--LVTRLENRQEK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-D 183
+ +V + + +P+ + +T P+ L I +PC +M + + L +
Sbjct: 141 SAIVLA---IPAPQAALLLENSL---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 184 PSYQISYLNV 193
PS I++L +
Sbjct: 191 PSTDIAWLGL 200
>gi|254439311|ref|ZP_05052805.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus
307]
gi|198254757|gb|EDY79071.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus
307]
Length = 314
Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 36/176 (20%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + ++ FDHGA + +++ E+ G +A W
Sbjct: 39 RVATRRAGDLQFDHGAQYVNAHGAGFASVLEAQETAGALAGWA----------------- 81
Query: 65 QDGMNKKY-VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
DG + + VGVPGM+++ KAL G++ + V R D W + DG +L
Sbjct: 82 -DGTGRTHMVGVPGMSALPKAL--GSGLDIRQNTQVLRLT--PDAGGWLLHLADG-TLRA 135
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
+ VV V +P+ + G P L +L + + PC LM A P
Sbjct: 136 ASVVV----TVPAPQVAALVGADHP--------LVARLGAVQMAPCLTLMAAVPGP 179
>gi|443290244|ref|ZP_21029338.1| Amine oxidase [Micromonospora lupini str. Lupac 08]
gi|385886571|emb|CCH17412.1| Amine oxidase [Micromonospora lupini str. Lupac 08]
Length = 332
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD 54
D GA +FT ++ D A+V EW + GLV EW S+D
Sbjct: 68 DTGAAYFTASDPDFAAVVDEWRAAGLVREWTDTFWSYD 105
>gi|422679535|ref|ZP_16737808.1| hypothetical protein PSYTB_04115 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331008882|gb|EGH88938.1| hypothetical protein PSYTB_04115 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 288
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYV 73
D GA +FT + V++W++ G VAEW L +F R+S ++V
Sbjct: 11 LDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS------PDEQVRWV 64
Query: 74 GVPGMNSICKAL 85
G PGM++I +A+
Sbjct: 65 GEPGMSAITRAM 76
>gi|161522869|ref|YP_001585798.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC 17616]
gi|160346422|gb|ABX19506.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC 17616]
Length = 354
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 27/193 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + DHGA +FT + +A V W +GG A W + S + + +
Sbjct: 63 RTSTRRTDGWQADHGAQYFTARHPAFVAEVARWVAGGAAAPWAARVASIGSLGPR----E 118
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++YVGVPGM + + L G+++ + E D W + + +L
Sbjct: 119 LLAPAQRYVGVPGMTAPARYLS--AGIDTMLETTI--IELTRDAQRWRLISAEHGALRMH 174
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTF----APDLAVKLEEIPVNPCFALMLAFSEPL 180
+ V + PPP + P LAV + + P +A+M +
Sbjct: 175 HDAV-------------IVAVPPPQAVALLRRAEPGLAVIAQRTEMRPAWAVMAQYGR-- 219
Query: 181 SSDPSYQISYLNV 193
DP + +++NV
Sbjct: 220 LPDPGFDAAFVNV 232
>gi|71737721|ref|YP_273285.1| hypothetical protein PSPPH_1014 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558274|gb|AAZ37485.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 328
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G V+EW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVSEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKAL 85
++VG PGM++I +A+
Sbjct: 97 ---PDEQVRWVGEPGMSAITRAM 116
>gi|323451534|gb|EGB07411.1| hypothetical protein AURANDRAFT_64951 [Aureococcus anophagefferens]
Length = 1585
Score = 39.3 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQSLGQFNGVVASDKNV 134
MN+ +ALCH P + F G E+ D N+ +S G S G +A+ K
Sbjct: 737 MNATVQALCHAPPIRDYFASG----EYAYDVNVDSRYSPRGALAASFGDLVAALATRKGP 792
Query: 135 VSP-RFRDVTGRPPPLDLTFA 154
V+P +FR V G+ D TFA
Sbjct: 793 VAPHKFRRVVGK---FDATFA 810
>gi|333368027|ref|ZP_08460249.1| NAD/FAD-dependent oxidoreductase family protein [Psychrobacter sp.
1501(2011)]
gi|332977968|gb|EGK14712.1| NAD/FAD-dependent oxidoreductase family protein [Psychrobacter sp.
1501(2011)]
Length = 389
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 13/143 (9%)
Query: 1 MSQRRETSEDGNEML--FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRV-- 56
++ R +T ED + FD GA FFT + ++ W + G++ W + +
Sbjct: 64 LATRYKTLEDNRDQQWQFDFGAQFFTAKSQSFQDYLQPWLAQGVIEPWLAKTATINSTTA 123
Query: 57 -SKKFVNIQQDGMNKKYVGVPGMNSICKALC--------HQPGVESKFGVGVGRFEWLED 107
S+ + Q D +Y+G P M S + L H + E +
Sbjct: 124 PSEIQITGQWDSDQPRYIGSPKMTSFGRHLATLLKHTEIHYKTRVAPLEQSEQTIEHTQS 183
Query: 108 KNLWSVSGLDGQSLGQFNGVVAS 130
N S+ ++G LG F+ V+ +
Sbjct: 184 NNKTSLVDIEGNDLGVFDWVICT 206
>gi|189348296|ref|YP_001941492.1| hypothetical protein BMULJ_05680 [Burkholderia multivorans ATCC
17616]
gi|189338434|dbj|BAG47502.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 337
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 27/193 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + DHGA +FT + +A V W +GG A W + S + + +
Sbjct: 46 RTSTRRTDGWQADHGAQYFTARHPAFVAEVARWVAGGAAAPWAARVASIGSLGPR----E 101
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++YVGVPGM + + L G+++ + E D W + + +L
Sbjct: 102 LLAPAQRYVGVPGMTAPARYLS--AGIDTMLETTI--IELTRDAQRWRLISAEHGALRMH 157
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTF----APDLAVKLEEIPVNPCFALMLAFSEPL 180
+ V + PPP + P LAV + + P +A+M +
Sbjct: 158 HDAV-------------IVAVPPPQAVALLRRAEPGLAVIAQRTEMRPAWAVMAQYGR-- 202
Query: 181 SSDPSYQISYLNV 193
DP + +++NV
Sbjct: 203 LPDPGFDAAFVNV 215
>gi|254503871|ref|ZP_05116022.1| hypothetical protein SADFL11_3910 [Labrenzia alexandrii DFL-11]
gi|222439942|gb|EEE46621.1| hypothetical protein SADFL11_3910 [Labrenzia alexandrii DFL-11]
Length = 283
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 35/182 (19%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T N + FDHGA + T + L++ S EW +
Sbjct: 12 RLATRRAENGLQFDHGAQYITAKTEEFQKLIQSLMSVDAAGEWDM--------------- 56
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
G ++GVP MN++ KAL + + V ED+ ++ G+
Sbjct: 57 ---GERTGFIGVPSMNALAKALASDLDIRRQ--AQVSSVTETEDRWFLAI----GEESLV 107
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSD 183
F+ ++ + +P+ + G P ++ ++ + + PC+ LM AF + + +
Sbjct: 108 FDRLIIT---APAPQTMALLGTGHP--------ISKQIAHVSLLPCWTLMAAFVDEVDAL 156
Query: 184 PS 185
P+
Sbjct: 157 PA 158
>gi|254491731|ref|ZP_05104910.1| hypothetical protein MDMS009_2066 [Methylophaga thiooxidans DMS010]
gi|224463209|gb|EEF79479.1| hypothetical protein MDMS009_2066 [Methylophaga thiooxydans DMS010]
Length = 326
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 21/162 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD+GA FFT + + V E ++ G+V W + FD + D YVG
Sbjct: 51 FDYGAQFFTAKTSAFQSFVDEMQAKGVVGIWNGHFIEFDH-TDICSERDWDESYPHYVGT 109
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M++I L + + + E + + W + D LG ++ VV
Sbjct: 110 PNMSAIGNWLAEPLTIHYETTIT----ELKKTASGWQLLQ-DDTELGAYDWVV------- 157
Query: 136 SPRFRDVTGRPPPLDLTFAPD--LAVKLEEIPVNPCFALMLA 175
+T PP + A + L I + CFAL +A
Sbjct: 158 ------LTMPPPQVSQLLAAEHTFQTTLSAITMQACFALRVA 193
>gi|456063712|ref|YP_007502682.1| FAD dependent oxidoreductase [beta proteobacterium CB]
gi|455441009|gb|AGG33947.1| FAD dependent oxidoreductase [beta proteobacterium CB]
Length = 331
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 29/193 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ E DHGA +FT + V+ W A W L ++ + + N Q
Sbjct: 45 RMSTRRSEEWSTDHGAQYFTARDPRFAQEVQRWIQASAAAVWNPRLRVYESKTWRESNSQ 104
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD-GQSLGQ 123
+ +YVG P MNS K L G+ ++ + + E + K W++ L+ G+
Sbjct: 105 E----IRYVGTPNMNSPGKYLA--KGLSIQYERTISQLERKDGK--WNLKCLEIGEITAS 156
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIP----VNPCFALMLAFSEP 179
++ VV + P P DL + I + C+ +M P
Sbjct: 157 YDFVVLAI--------------PAPQASALLKDLDTRASHITSSAQMKACWTMMAHL--P 200
Query: 180 LSSDPSYQISYLN 192
+ + +++N
Sbjct: 201 NQTRADFDAAFIN 213
>gi|405967022|gb|EKC32236.1| Small conductance calcium-activated potassium channel protein
[Crassostrea gigas]
Length = 861
Score = 38.1 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 14/179 (7%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R+T +G FDH +FTV++ +V + V W +G S KF +
Sbjct: 42 RKTMINGQLHTFDHSCQYFTVSDRRFANIVSFLHNKNAVKIWTGKIGHLK--SGKFH--E 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++G GM ++ L V+ V + W E W V G +
Sbjct: 98 DSNITQAFIGTDGMQTVADCLASNANVQRP--VWISEVFWEEGSRKWKVD-----RFGFY 150
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ ++ + + + G P L + F L + + + + + L++AF PL
Sbjct: 151 DYLIIAHNGKCADKLMSSAGAPEVHSLLRVRFNDVLNPRDQRMHLCSLWVLLIAFETPL 209
>gi|440796219|gb|ELR17328.1| FAD dependent oxidoreductase [Acanthamoeba castellanii str. Neff]
Length = 377
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 24/160 (15%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWK-VNLGSFDRVSKKFVNIQQDG----- 67
+ FD GA +FT + A V E + G V EW + + DR + + +G
Sbjct: 77 LSFDDGAQYFTARAPEFRAFVEECVARGCVREWAPLRVAVIDREGEVVLKPDDEGKKKEE 136
Query: 68 ----MNKKYVGVPGMNSICKALCHQPGVESKFGVGVG---RFEWLEDKNLWSVSGLDGQS 120
N +YVG P M + L + V V R E + W + G G+
Sbjct: 137 KEAENNARYVGSPTMQAFIPFLAQPVAHTIQQSVRVADIQRREGGDGGERWGLVGEKGED 196
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVK 160
LG F VV V +P+ D+ L AP+L K
Sbjct: 197 LGDFEAVVV---GVPAPQAVDL--------LRAAPNLRAK 225
>gi|334119311|ref|ZP_08493397.1| amine oxidase [Microcoleus vaginatus FGP-2]
gi|333458099|gb|EGK86718.1| amine oxidase [Microcoleus vaginatus FGP-2]
Length = 355
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA + + + V L+ ++ W ++G F + + + YV
Sbjct: 51 DHGARYLELQGDAVQGLIEALVDRDILKLWTDSVGEFRQGKLSAI------ASSCYVAPA 104
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMN+I K L +E FG V D +W +S + +D N+ +
Sbjct: 105 GMNAIGKYLAED--LEIWFGRRVQAIS-TTDNQMWHLS------------LEVTDDNLQT 149
Query: 137 PR----FRDVTGRPPPLDLTF-------APDLAVKLEEIPVNPCFALMLAFSEPLSSDPS 185
P+ V P P L F PD KL + +PC +M +S D S
Sbjct: 150 PQELIAKAVVVAIPAPQALMFLNSEIGFKPDFLDKLRSVDYDPCITVMAGYSAAEQQDLS 209
>gi|326389099|ref|ZP_08210681.1| putative deoxyribodipyrimidine photolyase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326206699|gb|EGD57534.1| putative deoxyribodipyrimidine photolyase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 320
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 19/85 (22%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + G FD GA +FTV + VREWE GL+ W
Sbjct: 47 MASRRIETPLGIAT-FDFGAQYFTVRDERFAFEVREWERAGLIQPWPA------------ 93
Query: 61 VNIQQDGMNKKYVGVPGMNSICKAL 85
+GVP MNSI K L
Sbjct: 94 ------AGPDALIGVPNMNSILKHL 112
>gi|304392272|ref|ZP_07374214.1| deoxyribodipyrimidine photolyase [Ahrensia sp. R2A130]
gi|303296501|gb|EFL90859.1| deoxyribodipyrimidine photolyase [Ahrensia sp. R2A130]
Length = 324
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 34/180 (18%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T +E+ FDHGA + V +++ LA + V LG V V
Sbjct: 45 RMATRRIDDEVAFDHGAQYARVRSDEFLAFL-------------VGLGDSAGVWTPRVKD 91
Query: 64 QQDGMNKK-YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
+K YVGV GMN + + L + V+ + V + G DG +
Sbjct: 92 DTVATDKPLYVGVSGMNRLLEPLRER--VDLRLNTLVSGL----------LVGADGVIIT 139
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAV--KLEEIPVNPCFALMLAFSEPL 180
+G S V+ T P + F D A+ + + V+PC++LM+ F +PL
Sbjct: 140 LEDGSTESFDRVI------CTIPVPQARVLFGTDQALVDAMSVVEVDPCWSLMVTFEQPL 193
>gi|255080734|ref|XP_002503940.1| predicted protein [Micromonas sp. RCC299]
gi|226519207|gb|ACO65198.1| predicted protein [Micromonas sp. RCC299]
Length = 468
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 76/206 (36%), Gaps = 46/206 (22%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVL-ALVREWESGGLVAEWKVNL------GSFDRVS 57
RE +++G FDH + T T ++ +EW GL+AEW + GSF
Sbjct: 46 REAADNGRRFSFDHSTQYMTCTEGSRFESMAKEWAKEGLLAEWPADRVGTLKDGSFTPFD 105
Query: 58 KKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED---------K 108
V +Y+G G+ + L ++ V R +W+ K
Sbjct: 106 DGVV---------RYIGAGGLRPLADFL-------AEGSTEVVRPQWVGAMTPVGGEGPK 149
Query: 109 NLWSV-SGLDGQSLGQFNGVVASDKNVVSPRFRDVT----GRPPPLDLTFAPDLAV---- 159
W + SG G+ LG F+ V S + R + G P + A
Sbjct: 150 RRWELASGPRGKPLGTFDFVAISHNGKCALRLAETAKLQDGSPAAAKTRASLQCAFGARP 209
Query: 160 -----KLEEIPVNPCFALMLAFSEPL 180
K ++ ++ +ALM A +PL
Sbjct: 210 TEELKKQRKLILSSVWALMFAVDKPL 235
>gi|170746499|ref|YP_001752759.1| FAD dependent oxidoreductase [Methylobacterium radiotolerans JCM
2831]
gi|170653021|gb|ACB22076.1| FAD dependent oxidoreductase [Methylobacterium radiotolerans JCM
2831]
Length = 313
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 42/124 (33%), Gaps = 24/124 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + +M FDHGA F A + W G+V W DR
Sbjct: 42 RMATRRAGDMQFDHGAQFMRARGPAFAAQLECWAQRGIVKPW----AGADR--------- 88
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YVGVPGM +AL G+ V R + W V G G F
Sbjct: 89 -------YVGVPGMTEPVRALLR--GLPVSSATTVVRLRRAGPR--WHVEDASGTVHGPF 137
Query: 125 NGVV 128
+G+
Sbjct: 138 DGIA 141
>gi|281205736|gb|EFA79925.1| hypothetical protein PPL_06745 [Polysphondylium pallidum PN500]
Length = 1221
Score = 37.4 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 136 SPRFRDVTGR----PPPLDLTFAPDLAVKLEEIPVN-PCFALMLAFSEPLSSDPSYQISY 190
SP F ++T R PPP D+ A+ E + V PC + ++ ++ + SY
Sbjct: 292 SPSFAEITTRTGLLPPPFDVRAMLMSAISSESLAVAVPCVIEFVRMADNVTRETSYFQEL 351
Query: 191 LNVLKGLYMV 200
+N+LK +YM+
Sbjct: 352 INILKNIYML 361
>gi|443473434|ref|ZP_21063458.1| Amine oxidase [Pseudomonas pseudoalcaligenes KF707]
gi|442904171|gb|ELS29287.1| Amine oxidase [Pseudomonas pseudoalcaligenes KF707]
Length = 327
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + +V++W G VAEW S N
Sbjct: 40 RMASKRTDAGSVDLGAQYFTARDRRFAEVVQQWRDRGWVAEW----------SPSLYNAS 89
Query: 65 QDGM------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG 118
+ G+ ++VG P M++I +AL + F + E + W + +G
Sbjct: 90 EGGLLPSPDEQIRWVGTPRMSAITRALL--GALPVNFACRI--TEVFRGERHWGLQDAEG 145
Query: 119 QSLGQFNGVV 128
S G F+ V+
Sbjct: 146 LSHGPFSHVI 155
>gi|422604190|ref|ZP_16676207.1| hypothetical protein PSYMO_03014 [Pseudomonas syringae pv. mori
str. 301020]
gi|330887849|gb|EGH20510.1| hypothetical protein PSYMO_03014 [Pseudomonas syringae pv. mori
str. 301020]
Length = 276
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 19 GAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYVGVP 76
GA +FT + V++W++ G VAEW L +F R+S ++VG P
Sbjct: 2 GAQYFTARDRRFATPVKQWQAQGHVAEWTPLLYNFHGGRLSPS------PDEQVRWVGEP 55
Query: 77 GMNSICKAL 85
GM++I +A+
Sbjct: 56 GMSAITRAM 64
>gi|86608160|ref|YP_476922.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556702|gb|ABD01659.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 366
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR G + DHGA + T ++ V+E GL+AEW +L DR +
Sbjct: 59 MATRR-VEHAGQTVPVDHGAQYLTADSDGFYRWVKELLGLGLLAEWTRSLHVLDREGLRP 117
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLD 117
+ + +YV GM + K L V ++ V + K L W + +
Sbjct: 118 EDPNDE--KPRYVCPQGMTMLAKHLAAPLSVHTQTRV-------VSLKPLATSWQLRAEN 168
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ V + P R+ + A +L LE PC A++ +S
Sbjct: 169 GQCYEAAALVATIPAPQLLPLLRE--------GIPSAENLLPLLESAQYQPCLAVLAGYS 220
Query: 178 E 178
E
Sbjct: 221 E 221
>gi|383790127|ref|YP_005474701.1| putative NAD/FAD-dependent oxidoreductase [Spirochaeta africana DSM
8902]
gi|383106661|gb|AFG36994.1| putative NAD/FAD-dependent oxidoreductase [Spirochaeta africana DSM
8902]
Length = 441
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 18/81 (22%)
Query: 12 NEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKK 71
E +FDHGA F TV + + W G+VA W F + N +
Sbjct: 81 GEAVFDHGAQFMTVRDPGFARAMAGWTKSGVVAPW-------------FGD-----KNTR 122
Query: 72 YVGVPGMNSICKALCHQPGVE 92
Y G GM ++ K L Q V+
Sbjct: 123 YRGQTGMTALAKQLSQQVDVQ 143
>gi|302848563|ref|XP_002955813.1| hypothetical protein VOLCADRAFT_121465 [Volvox carteri f.
nagariensis]
gi|300258781|gb|EFJ43014.1| hypothetical protein VOLCADRAFT_121465 [Volvox carteri f.
nagariensis]
Length = 464
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 14/184 (7%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN--LGSFDRVSKKFVNIQQ--- 65
G + FDHG + T A++ + G VA+W + +G+ V++
Sbjct: 89 GERLTFDHGCQYLTARTPLFGAVLGDLHDRGAVAQWGLGRPVGAAHLAEDGTVDMSTFVA 148
Query: 66 DGMNKKYVGVPGMNSICKALCHQPGVES---KFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
D +VG P +++ +AL + G + V V W +KN+W+ ++
Sbjct: 149 DTGKTMWVGNPTNSAVGRALAARVGSQRLAPLTAVRVDELVWNPEKNVWTCRARRAGAIN 208
Query: 123 QFNGVVASDKNVV------SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G +D + +G + P+L EI N C+AL++A
Sbjct: 209 TGGGGGGTDIDAAVANSSGGSGGSHGSGDGDGAESGLVPELVAAAREIRSNVCWALLVAL 268
Query: 177 SEPL 180
++ +
Sbjct: 269 NKKI 272
>gi|328770023|gb|EGF80065.1| hypothetical protein BATDEDRAFT_35055 [Batrachochytrium
dendrobatidis JAM81]
Length = 847
Score = 36.6 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 93 SKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152
S FG G+ + +K+LWSVS A DK+ + R L T
Sbjct: 435 SSFG-GILQTSQTTEKSLWSVS--------------ADDKHAIMHIRDQYIARVNTLIAT 479
Query: 153 FAPDLAVKLEEIPVNPCFALMLAFSEPLSSDPSYQISYLNVLK 195
D+ V P FA + +P S PS++I++LNV++
Sbjct: 480 LPIDVTTSYSHPLVKPPFAAIPVSLDPPSHSPSFEIAFLNVMR 522
>gi|427409810|ref|ZP_18900012.1| hypothetical protein HMPREF9718_02486 [Sphingobium yanoikuyae ATCC
51230]
gi|425711943|gb|EKU74958.1| hypothetical protein HMPREF9718_02486 [Sphingobium yanoikuyae ATCC
51230]
Length = 319
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 62/165 (37%), Gaps = 33/165 (20%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
+D GAP+FT + V W G VA W DG VGV
Sbjct: 49 WDLGAPWFTARDPRFRTEVGRWRKAGWVARWS------------------DGPGNAMVGV 90
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M ++ + + V +F V + + + W + +G +G F+ VV +
Sbjct: 91 PAMATLVREQSRRFDVHFEFRVQ----SLVREDSSWMIQA-EGDCVGPFDTVV-----IA 140
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
P + PL + A + + +PC+A+M+ F L
Sbjct: 141 VP-----AEQAAPLLSLHDLEAAREAASVRSSPCWAVMVEFPHQL 180
>gi|219124354|ref|XP_002182470.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405816|gb|EEC45757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 523
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 64/187 (34%), Gaps = 37/187 (19%)
Query: 13 EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKY 72
++ +DHG FF V W GG+ EW F QD + +
Sbjct: 57 KLEWDHGCQFFRADTERFRQKVEGWIEGGMCQEW-------------FGKFGQDSSSADF 103
Query: 73 VGVP-------GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG------- 118
G+P GM + +L ++ G+ V E + +W + G+ G
Sbjct: 104 FGLPGKPPFFVGMKGLIDSLLNEEGIHVYSDQRVSSLE--REGKVWKLLGVHGEAAFHDT 161
Query: 119 ------QSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFAL 172
Q +G NG A VS F + FA V+ P F+
Sbjct: 162 SVEAKPQPIGSTNGYDAVVLTDVSSSFDSWHRASAGVPAAFAAR--VRERAGSRVPLFSA 219
Query: 173 MLAFSEP 179
M+AF +P
Sbjct: 220 MVAFEQP 226
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,567,745,274
Number of Sequences: 23463169
Number of extensions: 152752423
Number of successful extensions: 281029
Number of sequences better than 100.0: 357
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 280618
Number of HSP's gapped (non-prelim): 376
length of query: 204
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 68
effective length of database: 9,168,204,383
effective search space: 623437898044
effective search space used: 623437898044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)