Your job contains 1 sequence.
>028759
MCSLQSQHFLNSPLLIFPKFNDNRKFHLNRTRNFGQRIGALSSVEEFLPNATRRKKDSLW
RGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEFIIGLPK
SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTK
TDAYAAVVRQESITFGHLMNIIFW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028759
(204 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1009023117 - symbol:AT1G12244 species:3702 "Ar... 559 4.3e-54 1
UNIPROTKB|P0A8I1 - symbol:yqgF species:83333 "Escherichia... 136 2.9e-09 1
UNIPROTKB|Q0BZU8 - symbol:HNE_2300 "Putative Holliday jun... 132 7.6e-09 1
UNIPROTKB|Q8EBZ8 - symbol:SO_3347 "Putative Holliday junc... 131 9.7e-09 1
TIGR_CMR|SO_3347 - symbol:SO_3347 "conserved hypothetical... 131 9.7e-09 1
UNIPROTKB|Q81LK2 - symbol:BAS4282 "Putative Holliday junc... 117 4.0e-07 1
TIGR_CMR|BA_4614 - symbol:BA_4614 "conserved hypothetical... 117 4.0e-07 1
UNIPROTKB|Q48P91 - symbol:PSPPH_0475 "Putative Holliday j... 111 2.0e-06 1
UNIPROTKB|Q87VA1 - symbol:PSPTO_5038 "Putative Holliday j... 111 2.0e-06 1
UNIPROTKB|Q3AEN4 - symbol:CHY_0542 "Putative Holliday jun... 108 4.5e-06 1
UNIPROTKB|Q83A17 - symbol:CBU_2094 "Putative Holliday jun... 108 4.5e-06 1
TIGR_CMR|CBU_2094 - symbol:CBU_2094 "conserved hypothetic... 108 4.5e-06 1
TIGR_CMR|CHY_0542 - symbol:CHY_0542 "conserved hypothetic... 108 4.5e-06 1
UNIPROTKB|Q71ZG8 - symbol:LMOf2365_1521 "Putative Hollida... 102 2.2e-05 1
UNIPROTKB|Q3ZAE3 - symbol:DET0051 "Putative Holliday junc... 101 2.9e-05 1
TIGR_CMR|DET_0051 - symbol:DET_0051 "conserved hypothetic... 101 2.9e-05 1
UNIPROTKB|Q5LQY2 - symbol:SPO2350 "Putative Holliday junc... 107 4.7e-05 1
TIGR_CMR|SPO_2350 - symbol:SPO_2350 "conserved hypothetic... 107 4.7e-05 1
UNIPROTKB|Q2GL11 - symbol:APH_0332 "Putative Holliday jun... 106 0.00017 1
TIGR_CMR|APH_0332 - symbol:APH_0332 "conserved hypothetic... 106 0.00017 1
UNIPROTKB|Q4K4E4 - symbol:PFL_5831 "Putative Holliday jun... 98 0.00078 1
>TAIR|locus:1009023117 [details] [associations]
symbol:AT1G12244 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016788 "hydrolase
activity, acting on ester bonds" evidence=IEA] InterPro:IPR005227
InterPro:IPR006641 InterPro:IPR012337 Pfam:PF03652 SMART:SM00732
EMBL:CP002684 GO:GO:0005737 GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0016788 SUPFAM:SSF53098 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
IPI:IPI00657456 RefSeq:NP_001031028.1 UniGene:At.47869
ProteinModelPortal:F4IC62 SMR:F4IC62 EnsemblPlants:AT1G12244.1
GeneID:3766708 KEGG:ath:AT1G12244 OMA:SKSERQN PhylomeDB:F4IC62
Uniprot:F4IC62
Length = 254
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 121/197 (61%), Positives = 146/197 (74%)
Query: 1 MCSLQSQHFLNSPLLIF--PKFNDNRKFHLNRTRNFGQRI----GALSSVEEFLPNATRR 54
MCSL H +S + F K+ + H R G R A++S++E PNA RR
Sbjct: 18 MCSL---HSFSSVAISFRTQKYVNTSLVH--RLSPIGYRNYPLPWAVTSIDEIPPNAVRR 72
Query: 55 KKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREETDEF 114
K D WRGGFSLGVDLGLSRTG+A+SKG+ V+PLTVLK RG+KLE +LLEIA+ EE DEF
Sbjct: 73 KIDRNWRGGFSLGVDLGLSRTGIAISKGYTVKPLTVLKSRGQKLETRLLEIAEEEEADEF 132
Query: 115 IIGLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSK 174
IIGLP+S DG ET QSNK+RSVAGRLA++AAERGWRVY+ DEH T++EA DRMI MGLSK
Sbjct: 133 IIGLPRSSDGKETIQSNKIRSVAGRLAIQAAERGWRVYVFDEHGTTSEASDRMIVMGLSK 192
Query: 175 SARQTKTDAYAAVVRQE 191
S RQ ++DAYAAV+ E
Sbjct: 193 SERQNRSDAYAAVILLE 209
>UNIPROTKB|P0A8I1 [details] [associations]
symbol:yqgF species:83333 "Escherichia coli K-12"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0031564 "transcription
antitermination" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0003676 EMBL:U28377
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
GO:GO:0031564 eggNOG:COG0816 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
HOGENOM:HOG000016954 PIR:D65080 RefSeq:NP_417424.1
RefSeq:YP_491148.1 PDB:1NMN PDB:1NU0 PDB:1OVQ PDBsum:1NMN
PDBsum:1NU0 PDBsum:1OVQ ProteinModelPortal:P0A8I1 SMR:P0A8I1
IntAct:P0A8I1 MINT:MINT-1317755 PRIDE:P0A8I1
EnsemblBacteria:EBESCT00000002163 EnsemblBacteria:EBESCT00000015039
GeneID:12930247 GeneID:947439 KEGG:ecj:Y75_p2879 KEGG:eco:b2949
PATRIC:32121308 EchoBASE:EB3075 EcoGene:EG13290
BioCyc:EcoCyc:G7525-MONOMER BioCyc:ECOL316407:JW2916-MONOMER
EvolutionaryTrace:P0A8I1 Genevestigator:P0A8I1 Uniprot:P0A8I1
Length = 138
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 40/133 (30%), Positives = 65/133 (48%)
Query: 63 GFSLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLP 119
G L D G G+A+ + RPL +K + + ++E +E + DE I+GLP
Sbjct: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62
Query: 120 KSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQT 179
+ DG+E P + + R A R+ R G V L DE ++ EA + G ++ +
Sbjct: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119
Query: 180 KTDAYAAVVRQES 192
K D+ +AV+ ES
Sbjct: 120 KVDSASAVIILES 132
>UNIPROTKB|Q0BZU8 [details] [associations]
symbol:HNE_2300 "Putative Holliday junction resolvase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0004518 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:YP_760995.1 ProteinModelPortal:Q0BZU8 STRING:Q0BZU8
GeneID:4289548 KEGG:hne:HNE_2300 PATRIC:32217441
BioCyc:HNEP228405:GI69-2322-MONOMER Uniprot:Q0BZU8
Length = 151
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 46/139 (33%), Positives = 70/139 (50%)
Query: 61 RGGFSLGVDLGLSRTGLALSKGF--CVRPL-TVLKLR-GEKLELQLLEIAQREETDEFII 116
R G LG+D G + G+A + P+ T+LK + LE +LL I I+
Sbjct: 11 REGVLLGIDPGTATIGVAATDRIRMMASPVETILKKKLAPSLE-RLLHIYDERAAVGLIV 69
Query: 117 GLPKSWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSA 176
GLP + DGS P++ VR++ L R V DE +SAEA D M G ++
Sbjct: 70 GLPLNVDGSMGPRAQSVRTLVSSLL---KVRDLPVTFQDERYSSAEAGDIMRAAGATRRN 126
Query: 177 RQTKTDAYAA-VVRQESIT 194
R+ + DA AA V+ Q++++
Sbjct: 127 REARIDASAAAVILQDALS 145
>UNIPROTKB|Q8EBZ8 [details] [associations]
symbol:SO_3347 "Putative Holliday junction resolvase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
ProtClustDB:PRK00109 HOGENOM:HOG000016954 OMA:ESYFENQ
RefSeq:NP_718901.1 ProteinModelPortal:Q8EBZ8 SMR:Q8EBZ8
GeneID:1171029 KEGG:son:SO_3347 PATRIC:23526368 Uniprot:Q8EBZ8
Length = 141
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 38/135 (28%), Positives = 68/135 (50%)
Query: 66 LGVDLGLSRTGLALSKGFCVR--PLTVLK-LRGEKLELQLLEIAQREETDEFIIGLPKSW 122
LG D G G+A+ + PL +K + G ++ ++ Q + D ++GLP +
Sbjct: 7 LGFDFGTKSIGVAVGQQITASATPLLSIKAVDGIPNWEEIAKLIQEWQPDLVVVGLPLNM 66
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E +++ R A RL A+ G +++ DE T+ +A R+ +G K+ + + D
Sbjct: 67 DGTEQEMTHRARKFANRLN---AKFGVKIFTQDERLTTTDAKARLFELGGYKALTKGQVD 123
Query: 183 AYAAVVRQESITFGH 197
A +AV+ ES H
Sbjct: 124 AVSAVLIIESYFENH 138
>TIGR_CMR|SO_3347 [details] [associations]
symbol:SO_3347 "conserved hypothetical protein TIGR00250"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
ProtClustDB:PRK00109 HOGENOM:HOG000016954 OMA:ESYFENQ
RefSeq:NP_718901.1 ProteinModelPortal:Q8EBZ8 SMR:Q8EBZ8
GeneID:1171029 KEGG:son:SO_3347 PATRIC:23526368 Uniprot:Q8EBZ8
Length = 141
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 38/135 (28%), Positives = 68/135 (50%)
Query: 66 LGVDLGLSRTGLALSKGFCVR--PLTVLK-LRGEKLELQLLEIAQREETDEFIIGLPKSW 122
LG D G G+A+ + PL +K + G ++ ++ Q + D ++GLP +
Sbjct: 7 LGFDFGTKSIGVAVGQQITASATPLLSIKAVDGIPNWEEIAKLIQEWQPDLVVVGLPLNM 66
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG+E +++ R A RL A+ G +++ DE T+ +A R+ +G K+ + + D
Sbjct: 67 DGTEQEMTHRARKFANRLN---AKFGVKIFTQDERLTTTDAKARLFELGGYKALTKGQVD 123
Query: 183 AYAAVVRQESITFGH 197
A +AV+ ES H
Sbjct: 124 AVSAVLIIESYFENH 138
>UNIPROTKB|Q81LK2 [details] [associations]
symbol:BAS4282 "Putative Holliday junction resolvase"
species:1392 "Bacillus anthracis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR005227
InterPro:IPR006641 InterPro:IPR012337 Pfam:PF03652 SMART:SM00732
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 RefSeq:NP_846833.1 RefSeq:YP_021261.1
RefSeq:YP_030530.1 ProteinModelPortal:Q81LK2 SMR:Q81LK2
DNASU:1088650 EnsemblBacteria:EBBACT00000010456
EnsemblBacteria:EBBACT00000016012 EnsemblBacteria:EBBACT00000020110
GeneID:1088650 GeneID:2816247 GeneID:2853167 KEGG:ban:BA_4614
KEGG:bar:GBAA_4614 KEGG:bat:BAS4282 OMA:KNMNGTV
ProtClustDB:PRK00109 BioCyc:BANT260799:GJAJ-4338-MONOMER
BioCyc:BANT261594:GJ7F-4486-MONOMER Uniprot:Q81LK2
Length = 137
Score = 117 (46.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 37/129 (28%), Positives = 69/129 (53%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
LG+D+G G+A+S G+ + L +K+ E+ + ++ E+ ++ + D+ ++GLPK
Sbjct: 4 LGLDVGTKTVGVAISDEMGWTAQGLETIKINEERGQFGFDRISELVKQYDVDKIVVGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM-INMGLSKSARQT 179
+ +G+ P+ + A L R + V + DE R S A +R+ I+ +S+ R+
Sbjct: 64 NMNGTIGPRGEACQQFAENL--RELLQ-LDVVMWDE-RLSTMAAERLLISADVSRKKRKQ 119
Query: 180 KTDAYAAVV 188
D AAVV
Sbjct: 120 VIDKMAAVV 128
>TIGR_CMR|BA_4614 [details] [associations]
symbol:BA_4614 "conserved hypothetical protein TIGR00250"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0004518 eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
RefSeq:NP_846833.1 RefSeq:YP_021261.1 RefSeq:YP_030530.1
ProteinModelPortal:Q81LK2 SMR:Q81LK2 DNASU:1088650
EnsemblBacteria:EBBACT00000010456 EnsemblBacteria:EBBACT00000016012
EnsemblBacteria:EBBACT00000020110 GeneID:1088650 GeneID:2816247
GeneID:2853167 KEGG:ban:BA_4614 KEGG:bar:GBAA_4614 KEGG:bat:BAS4282
OMA:KNMNGTV ProtClustDB:PRK00109
BioCyc:BANT260799:GJAJ-4338-MONOMER
BioCyc:BANT261594:GJ7F-4486-MONOMER Uniprot:Q81LK2
Length = 137
Score = 117 (46.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 37/129 (28%), Positives = 69/129 (53%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
LG+D+G G+A+S G+ + L +K+ E+ + ++ E+ ++ + D+ ++GLPK
Sbjct: 4 LGLDVGTKTVGVAISDEMGWTAQGLETIKINEERGQFGFDRISELVKQYDVDKIVVGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRM-INMGLSKSARQT 179
+ +G+ P+ + A L R + V + DE R S A +R+ I+ +S+ R+
Sbjct: 64 NMNGTIGPRGEACQQFAENL--RELLQ-LDVVMWDE-RLSTMAAERLLISADVSRKKRKQ 119
Query: 180 KTDAYAAVV 188
D AAVV
Sbjct: 120 VIDKMAAVV 128
>UNIPROTKB|Q48P91 [details] [associations]
symbol:PSPPH_0475 "Putative Holliday junction resolvase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
GO:GO:0006281 GO:GO:0003676 GO:GO:0006310 GO:GO:0090305
SUPFAM:SSF53098 EMBL:CP000058 GenomeReviews:CP000058_GR
GO:GO:0004518 eggNOG:COG0816 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 ProtClustDB:PRK00109
HOGENOM:HOG000016954 OMA:ESYFENQ RefSeq:YP_272778.1
ProteinModelPortal:Q48P91 SMR:Q48P91 STRING:Q48P91 GeneID:3560056
KEGG:psp:PSPPH_0475 PATRIC:19969982 Uniprot:Q48P91
Length = 146
Score = 111 (44.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
LG+D G + G+A+ + R L LK + + ++ E + D ++GLP +
Sbjct: 8 LGIDYGTKQIGVAVGQAITGQARELCTLKAQNGVPDWDKVQALINEWKPDAIVVGLPLNM 67
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAV-DRMINMGLSKSARQTKT 181
DG+ + S + + +L R G VY DE T+ EA +RM G S R
Sbjct: 68 DGTPSDMSARAEKFSRKLNGRF---GVTVYTHDERLTTFEAKGERMARGGQKGSYRNNPV 124
Query: 182 DAYAAVVRQESITFGH--LMNI 201
DA AA + + H L+N+
Sbjct: 125 DAIAAALLLQGWLDEHPELLNV 146
>UNIPROTKB|Q87VA1 [details] [associations]
symbol:PSPTO_5038 "Putative Holliday junction resolvase"
species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
GO:GO:0006281 GO:GO:0003676 GO:GO:0006310 GO:GO:0090305
SUPFAM:SSF53098 EMBL:AE016853 GenomeReviews:AE016853_GR
GO:GO:0004518 eggNOG:COG0816 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 ProtClustDB:PRK00109
HOGENOM:HOG000016954 OMA:AHENTAR RefSeq:NP_794771.1
ProteinModelPortal:Q87VA1 SMR:Q87VA1 GeneID:1186723
KEGG:pst:PSPTO_5038 PATRIC:20001602
BioCyc:PSYR223283:GJIX-5106-MONOMER Uniprot:Q87VA1
Length = 146
Score = 111 (44.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
LG+D G + G+A+ + R L LK + + ++ E + D ++GLP +
Sbjct: 8 LGIDYGTKQIGVAVGQAITGQARELCTLKAQNGVPDWDKVQALINEWKPDAIVVGLPLNM 67
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAV-DRMINMGLSKSARQTKT 181
DG+ + S + + +L R G VY DE T+ EA +RM G S R
Sbjct: 68 DGTPSEMSARAEKFSRKLNGRF---GVTVYTHDERLTTFEAKGERMARGGQKGSYRDNPV 124
Query: 182 DAYAAVVRQESITFGH--LMNI 201
DA AA + + H L+N+
Sbjct: 125 DAIAAALLLQGWLDEHPELLNV 146
>UNIPROTKB|Q3AEN4 [details] [associations]
symbol:CHY_0542 "Putative Holliday junction resolvase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV RefSeq:YP_359400.1
ProteinModelPortal:Q3AEN4 STRING:Q3AEN4 GeneID:3727317
KEGG:chy:CHY_0542 PATRIC:21274231
BioCyc:CHYD246194:GJCN-543-MONOMER Uniprot:Q3AEN4
Length = 138
Score = 108 (43.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G + G+ALS G + LTV+ K +L+ + +I E +IG P++
Sbjct: 4 LGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDLEEIKKIIDLHHVTEVVIGYPRNM 63
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
+G+ P++ V+ A L G + DE ++ EA +I+ +S+ R+ D
Sbjct: 64 NGTAGPRAELVKRFARELYKFT---GIKPVFWDERLSTVEAEKLLISGDISRRKRKKVID 120
Query: 183 AYAAVV 188
AA +
Sbjct: 121 KLAATL 126
>UNIPROTKB|Q83A17 [details] [associations]
symbol:CBU_2094 "Putative Holliday junction resolvase"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
ProtClustDB:PRK00109 HOGENOM:HOG000016954 RefSeq:NP_821064.2
ProteinModelPortal:Q83A17 GeneID:1210007 KEGG:cbu:CBU_2094
PATRIC:17932937 OMA:CDPLCIT BioCyc:CBUR227377:GJ7S-2060-MONOMER
Uniprot:Q83A17
Length = 141
Score = 108 (43.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 65 SLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLE-IAQREETDEFIIGLPKS 121
+LG D G+ R G+A+ + + +LK + + + ++ + + + ++G+P +
Sbjct: 8 ALGFDFGMKRIGVAVGQTVTHSANAIAILKAQDGVPDWEKIKMLIETWHANVLVVGIPYN 67
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKT 181
DGSE + R A +L +R G V ++DE T+ EA + GL+K R
Sbjct: 68 MDGSEQTLTFAARKFARKLQMRF---GLPVSMVDERLTTIEAKRQWYEQGLTK--RPQHL 122
Query: 182 DAYAA 186
D YAA
Sbjct: 123 DNYAA 127
>TIGR_CMR|CBU_2094 [details] [associations]
symbol:CBU_2094 "conserved hypothetical protein TIGR00250"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
ProtClustDB:PRK00109 HOGENOM:HOG000016954 RefSeq:NP_821064.2
ProteinModelPortal:Q83A17 GeneID:1210007 KEGG:cbu:CBU_2094
PATRIC:17932937 OMA:CDPLCIT BioCyc:CBUR227377:GJ7S-2060-MONOMER
Uniprot:Q83A17
Length = 141
Score = 108 (43.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 65 SLGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLE-IAQREETDEFIIGLPKS 121
+LG D G+ R G+A+ + + +LK + + + ++ + + + ++G+P +
Sbjct: 8 ALGFDFGMKRIGVAVGQTVTHSANAIAILKAQDGVPDWEKIKMLIETWHANVLVVGIPYN 67
Query: 122 WDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKT 181
DGSE + R A +L +R G V ++DE T+ EA + GL+K R
Sbjct: 68 MDGSEQTLTFAARKFARKLQMRF---GLPVSMVDERLTTIEAKRQWYEQGLTK--RPQHL 122
Query: 182 DAYAA 186
D YAA
Sbjct: 123 DNYAA 127
>TIGR_CMR|CHY_0542 [details] [associations]
symbol:CHY_0542 "conserved hypothetical protein TIGR00250"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006281 GO:GO:0003676
GO:GO:0006310 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518
eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV RefSeq:YP_359400.1
ProteinModelPortal:Q3AEN4 STRING:Q3AEN4 GeneID:3727317
KEGG:chy:CHY_0542 PATRIC:21274231
BioCyc:CHYD246194:GJCN-543-MONOMER Uniprot:Q3AEN4
Length = 138
Score = 108 (43.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
LG+D+G + G+ALS G + LTV+ K +L+ + +I E +IG P++
Sbjct: 4 LGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDLEEIKKIIDLHHVTEVVIGYPRNM 63
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
+G+ P++ V+ A L G + DE ++ EA +I+ +S+ R+ D
Sbjct: 64 NGTAGPRAELVKRFARELYKFT---GIKPVFWDERLSTVEAEKLLISGDISRRKRKKVID 120
Query: 183 AYAAVV 188
AA +
Sbjct: 121 KLAATL 126
>UNIPROTKB|Q71ZG8 [details] [associations]
symbol:LMOf2365_1521 "Putative Holliday junction resolvase"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR005227 InterPro:IPR006641
InterPro:IPR012337 Pfam:PF03652 SMART:SM00732 GO:GO:0005737
GO:GO:0006281 GO:GO:0003676 GO:GO:0006310 GO:GO:0090305
SUPFAM:SSF53098 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0004518 eggNOG:COG0816 HOGENOM:HOG000016953 KO:K07447
Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250 OMA:KNMNGTV
ProtClustDB:PRK00109 RefSeq:YP_014119.1 ProteinModelPortal:Q71ZG8
SMR:Q71ZG8 STRING:Q71ZG8 GeneID:2798572 KEGG:lmf:LMOf2365_1521
PATRIC:20324281 Uniprot:Q71ZG8
Length = 138
Score = 102 (41.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/132 (24%), Positives = 66/132 (50%)
Query: 66 LGVDLGLSRTGLALSK--GFCVRPLTVLKLRGEKLEL---QLLEIAQREETDEFIIGLPK 120
+G+D+G G+A+S G+ + + +++ + + ++ E+ E ++ ++GLPK
Sbjct: 4 MGLDVGSKTVGVAISDPLGWTAQGVETIQIDENRKQFGYDRVKELVLEYEVEKVVVGLPK 63
Query: 121 SWDGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTK 180
+ + + P++ + A L R G V L DE T++ A +I +S+ R+
Sbjct: 64 NMNNTIGPRAESSKIYAEVLESRI---GLPVVLWDERLTTSAAERTLIEADVSRKKRKEV 120
Query: 181 TDAYAAVVRQES 192
D AAV+ +S
Sbjct: 121 IDKLAAVMILQS 132
>UNIPROTKB|Q3ZAE3 [details] [associations]
symbol:DET0051 "Putative Holliday junction resolvase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 RefSeq:YP_180806.1
ProteinModelPortal:Q3ZAE3 STRING:Q3ZAE3 GeneID:3229044
KEGG:det:DET0051 PATRIC:21607205 ProtClustDB:CLSK836769
BioCyc:DETH243164:GJNF-51-MONOMER Uniprot:Q3ZAE3
Length = 133
Score = 101 (40.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 76 GLALSKGFCV--RPLTVLKLRGEKLELQLLE-IAQREETDEFIIGLPKSWDGSETPQSNK 132
G+ALS + PL +L+ + ++ +E + + + D +IGLP S +G+ PQ+ K
Sbjct: 7 GVALSDPLRILASPLVILRRDDDAKTVENIEALVKTHQPDLLVIGLPVSLNGTIGPQAEK 66
Query: 133 VRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTDAYAAVV 188
V++ +G L+ + DE ++ EA +M + G K+ + + DA AA V
Sbjct: 67 VKAFSGLLS---QSLNTEIIFRDERFSTDEARRKMNDSG--KNNKTVRDDAAAAAV 117
>TIGR_CMR|DET_0051 [details] [associations]
symbol:DET_0051 "conserved hypothetical protein TIGR00250"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 RefSeq:YP_180806.1
ProteinModelPortal:Q3ZAE3 STRING:Q3ZAE3 GeneID:3229044
KEGG:det:DET0051 PATRIC:21607205 ProtClustDB:CLSK836769
BioCyc:DETH243164:GJNF-51-MONOMER Uniprot:Q3ZAE3
Length = 133
Score = 101 (40.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 76 GLALSKGFCV--RPLTVLKLRGEKLELQLLE-IAQREETDEFIIGLPKSWDGSETPQSNK 132
G+ALS + PL +L+ + ++ +E + + + D +IGLP S +G+ PQ+ K
Sbjct: 7 GVALSDPLRILASPLVILRRDDDAKTVENIEALVKTHQPDLLVIGLPVSLNGTIGPQAEK 66
Query: 133 VRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTDAYAAVV 188
V++ +G L+ + DE ++ EA +M + G K+ + + DA AA V
Sbjct: 67 VKAFSGLLS---QSLNTEIIFRDERFSTDEARRKMNDSG--KNNKTVRDDAAAAAV 117
>UNIPROTKB|Q5LQY2 [details] [associations]
symbol:SPO2350 "Putative Holliday junction resolvase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
RefSeq:YP_167573.1 ProteinModelPortal:Q5LQY2 GeneID:3194839
KEGG:sil:SPO2350 PATRIC:23378069 Uniprot:Q5LQY2
Length = 154
Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 67 GVDLGLSRTGLALS---KGFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
G+DLG G+A+S +G PL ++ + L+ LL I ++ E ++GLP++
Sbjct: 21 GLDLGDKTIGVAVSDRMRGVAT-PLETIRRKKFGLDASALLAIVEQREIAGIVLGLPRNM 79
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DGSE P+ R+ A L+ R E + DE ++ A ++ ++ R D
Sbjct: 80 DGSEGPRCQSTRAFARNLS-RLTEVA--ITFWDERLSTVAAEKALLEADTTRKRRSEVID 136
Query: 183 AYAA 186
AA
Sbjct: 137 HVAA 140
>TIGR_CMR|SPO_2350 [details] [associations]
symbol:SPO_2350 "conserved hypothetical protein TIGR00250"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0003676 GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651
TIGRFAMs:TIGR00250 OMA:KNMNGTV ProtClustDB:PRK00109
RefSeq:YP_167573.1 ProteinModelPortal:Q5LQY2 GeneID:3194839
KEGG:sil:SPO2350 PATRIC:23378069 Uniprot:Q5LQY2
Length = 154
Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 67 GVDLGLSRTGLALS---KGFCVRPLTVLKLRGEKLELQ-LLEIAQREETDEFIIGLPKSW 122
G+DLG G+A+S +G PL ++ + L+ LL I ++ E ++GLP++
Sbjct: 21 GLDLGDKTIGVAVSDRMRGVAT-PLETIRRKKFGLDASALLAIVEQREIAGIVLGLPRNM 79
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DGSE P+ R+ A L+ R E + DE ++ A ++ ++ R D
Sbjct: 80 DGSEGPRCQSTRAFARNLS-RLTEVA--ITFWDERLSTVAAEKALLEADTTRKRRSEVID 136
Query: 183 AYAA 186
AA
Sbjct: 137 HVAA 140
>UNIPROTKB|Q2GL11 [details] [associations]
symbol:APH_0332 "Putative Holliday junction resolvase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 RefSeq:YP_504940.1
ProteinModelPortal:Q2GL11 STRING:Q2GL11 GeneID:3930978
KEGG:aph:APH_0332 PATRIC:20949248 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP ProtClustDB:CLSK749487
BioCyc:APHA212042:GHPM-361-MONOMER Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 Uniprot:Q2GL11
Length = 166
Score = 106 (42.4 bits), Expect = 0.00017, P = 0.00017
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 66 LGVDLGLSRTGLALSKG-FCVR-PLTVLKLRGEKLEL-QLLEIAQREETDEFIIGLPKSW 122
LG+D G + GLALS + + P +V R + +L +L + + E+ ++G P
Sbjct: 20 LGIDFGERKIGLALSDPTYLIAIPHSVYHRRNMRQDLGELSAVLRSEDAAVVVMGNPLQS 79
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG E VR+ A +L ++ G +YL DE T+A A GL + Q D
Sbjct: 80 DGLEGEMCQIVRAFAQKLIKKS---GVSIYLHDERYTTAMASRATREAGLRRKESQKIDD 136
Query: 183 AY-AAVVRQE 191
AA+V Q+
Sbjct: 137 KISAALVLQQ 146
>TIGR_CMR|APH_0332 [details] [associations]
symbol:APH_0332 "conserved hypothetical protein TIGR00250"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 GO:GO:0006310 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 RefSeq:YP_504940.1
ProteinModelPortal:Q2GL11 STRING:Q2GL11 GeneID:3930978
KEGG:aph:APH_0332 PATRIC:20949248 eggNOG:COG0816
HOGENOM:HOG000016953 KO:K07447 OMA:ERSIAMP ProtClustDB:CLSK749487
BioCyc:APHA212042:GHPM-361-MONOMER Gene3D:3.30.420.140
HAMAP:MF_00651 TIGRFAMs:TIGR00250 Uniprot:Q2GL11
Length = 166
Score = 106 (42.4 bits), Expect = 0.00017, P = 0.00017
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 66 LGVDLGLSRTGLALSKG-FCVR-PLTVLKLRGEKLEL-QLLEIAQREETDEFIIGLPKSW 122
LG+D G + GLALS + + P +V R + +L +L + + E+ ++G P
Sbjct: 20 LGIDFGERKIGLALSDPTYLIAIPHSVYHRRNMRQDLGELSAVLRSEDAAVVVMGNPLQS 79
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAVDRMINMGLSKSARQTKTD 182
DG E VR+ A +L ++ G +YL DE T+A A GL + Q D
Sbjct: 80 DGLEGEMCQIVRAFAQKLIKKS---GVSIYLHDERYTTAMASRATREAGLRRKESQKIDD 136
Query: 183 AY-AAVVRQE 191
AA+V Q+
Sbjct: 137 KISAALVLQQ 146
>UNIPROTKB|Q4K4E4 [details] [associations]
symbol:PFL_5831 "Putative Holliday junction resolvase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005227 InterPro:IPR006641 InterPro:IPR012337
Pfam:PF03652 SMART:SM00732 GO:GO:0005737 GO:GO:0006281
GO:GO:0003676 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006310
GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0004518 eggNOG:COG0816
KO:K07447 Gene3D:3.30.420.140 HAMAP:MF_00651 TIGRFAMs:TIGR00250
OMA:KNMNGTV ProtClustDB:PRK00109 HOGENOM:HOG000016954
RefSeq:YP_262889.1 ProteinModelPortal:Q4K4E4 SMR:Q4K4E4
STRING:Q4K4E4 GeneID:3480203 KEGG:pfl:PFL_5831 PATRIC:19881169
BioCyc:PFLU220664:GIX8-5871-MONOMER Uniprot:Q4K4E4
Length = 145
Score = 98 (39.6 bits), Expect = 0.00078, P = 0.00078
Identities = 37/127 (29%), Positives = 55/127 (43%)
Query: 66 LGVDLGLSRTGLALSKGFC--VRPLTVLKLRGEKLELQLLEIAQRE-ETDEFIIGLPKSW 122
LG D G + G+A+ + R L LK + + +E +E + D ++GLP +
Sbjct: 7 LGFDYGTKQIGVAVGQAITGQARELCTLKAQNGVPDWNQVEALIKEWKPDAVVVGLPLNM 66
Query: 123 DGSETPQSNKVRSVAGRLAVRAAERGWRVYLLDEHRTSAEAV-DRMINMGLSKSARQTKT 181
DGS + + A RL R Y DE T+ EA +R+ G S R
Sbjct: 67 DGSPSDMCVRAEKFARRLNGRF---NVPFYTHDERLTTFEAKGERLARGGQKGSYRDNPV 123
Query: 182 DAYAAVV 188
DA AA +
Sbjct: 124 DAIAAAL 130
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 204 204 0.00094 111 3 11 22 0.45 32
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 602 (64 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.31u 0.09s 18.40t Elapsed: 00:00:01
Total cpu time: 18.31u 0.09s 18.40t Elapsed: 00:00:01
Start: Sat May 11 09:48:12 2013 End: Sat May 11 09:48:13 2013