BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028763
MLPRERREILLGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFD
FCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCD
SVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACL
YTRIQSMLSCDGSHRHTRRLCPCA

High Scoring Gene Products

Symbol, full name Information P value
AT3G59390 protein from Arabidopsis thaliana 8.2e-83
2410131K14Rik
RIKEN cDNA 2410131K14 gene
protein from Mus musculus 7.4e-11
Q17QN8
UPF0454 protein C12orf49 homolog
protein from Bos taurus 9.4e-11
C12orf49
UPF0454 protein C12orf49
protein from Homo sapiens 3.9e-09
RCJMB04_18o22
UPF0454 protein C12orf49 homolog
protein from Gallus gallus 6.8e-09
zgc:110063 gene_product from Danio rerio 2.3e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028763
        (204 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2081192 - symbol:AT3G59390 "AT3G59390" species...   830  8.2e-83   1
MGI|MGI:1924042 - symbol:2410131K14Rik "RIKEN cDNA 241013...   151  7.4e-11   1
UNIPROTKB|Q17QN8 - symbol:Q17QN8 "UPF0454 protein C12orf4...   150  9.4e-11   1
UNIPROTKB|Q9H741 - symbol:C12orf49 "UPF0454 protein C12or...   141  3.9e-09   1
UNIPROTKB|Q5ZJE4 - symbol:RCJMB04_18o22 "UPF0454 protein ...   140  6.8e-09   1
ZFIN|ZDB-GENE-050522-367 - symbol:zgc:110063 "zgc:110063"...   136  2.3e-08   1


>TAIR|locus:2081192 [details] [associations]
            symbol:AT3G59390 "AT3G59390" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR019352
            PANTHER:PTHR13481 Pfam:PF10218 IPI:IPI00528598 RefSeq:NP_191498.2
            RefSeq:NP_974460.1 UniGene:At.34636 PRIDE:F4J8A2
            EnsemblPlants:AT3G59390.1 EnsemblPlants:AT3G59390.2 GeneID:825108
            KEGG:ath:AT3G59390 OMA:VVHENAY Uniprot:F4J8A2
        Length = 273

 Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
 Identities = 144/193 (74%), Positives = 171/193 (88%)

Query:    12 GCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSE 71
             GCN+LSQCCNSYE+CVSCC+NP++TL E+V+ VK+AKP T+GTY SVFDFCAGRCRHNSE
Sbjct:    81 GCNILSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPATSGTYKSVFDFCAGRCRHNSE 140

Query:    72 SVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCV 131
             SVVHENAY S+FHHCFS+ SNASGA +TQ+E RL GI VI+G QG+SCD+VCKS GQ CV
Sbjct:   141 SVVHENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVIVGSQGDSCDAVCKSRGQLCV 200

Query:   132 LNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCD 191
             +NKL LLNQC+++++YM+CK  CLAS GADQPAEV +DAP +L P ACLYTR QS+LSCD
Sbjct:   201 MNKLSLLNQCDVMKRYMNCKGSCLASAGADQPAEVVEDAPRDLYPGACLYTRTQSLLSCD 260

Query:   192 GSHRHTRRLCPCA 204
             GSH+HTRRLCPCA
Sbjct:   261 GSHQHTRRLCPCA 273


>MGI|MGI:1924042 [details] [associations]
            symbol:2410131K14Rik "RIKEN cDNA 2410131K14 gene"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] MGI:MGI:1924042 GO:GO:0005576
            GeneTree:ENSGT00390000008031 HOVERGEN:HBG097587 OMA:LGYICER
            InterPro:IPR019352 PANTHER:PTHR13481 Pfam:PF10218 eggNOG:NOG237537
            HOGENOM:HOG000044706 OrthoDB:EOG4XD3S2 EMBL:AK090380 EMBL:BC104372
            EMBL:BC104373 IPI:IPI00277833 RefSeq:NP_001074705.1
            UniGene:Mm.103428 ProteinModelPortal:Q8BTG6 PRIDE:Q8BTG6
            Ensembl:ENSMUST00000049138 GeneID:76792 KEGG:mmu:76792
            UCSC:uc008zgj.1 InParanoid:Q8BTG6 NextBio:345819 Bgee:Q8BTG6
            CleanEx:MM_2410131K14RIK Genevestigator:Q8BTG6 Uniprot:Q8BTG6
        Length = 205

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 32/89 (35%), Positives = 48/89 (53%)

Query:     2 LPRERREILLGCNLLSQCCNSYEYCVSCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVF 59
             +P  ++    GC L + CC +YEYCVSCC+ P++ L  E+ LN   +A           F
Sbjct:   108 VPSTKQYCCDGC-LANGCCEAYEYCVSCCLQPSKQLLLERFLNRAAVAFQNLFMAVEDHF 166

Query:    60 DFCAGRCRHNSESVVHENAYLSDF-HHCF 87
             + C  +CR +S+SV HEN Y      +C+
Sbjct:   167 ELCLAKCRTSSQSVQHENTYRDPIAKYCY 195


>UNIPROTKB|Q17QN8 [details] [associations]
            symbol:Q17QN8 "UPF0454 protein C12orf49 homolog"
            species:9913 "Bos taurus" [GO:0005576 "extracellular region"
            evidence=IEA] GO:GO:0005576 EMBL:BC118254 IPI:IPI00700058
            RefSeq:NP_001069491.1 UniGene:Bt.26675 PRIDE:Q17QN8
            Ensembl:ENSBTAT00000063283 GeneID:534423 KEGG:bta:534423 CTD:534423
            GeneTree:ENSGT00390000008031 HOVERGEN:HBG097587 OMA:LGYICER
            NextBio:20876398 InterPro:IPR019352 PANTHER:PTHR13481 Pfam:PF10218
            Uniprot:Q17QN8
        Length = 205

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 32/79 (40%), Positives = 44/79 (55%)

Query:    12 GCNLLSQCCNSYEYCVSCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHN 69
             GC L S CC++YEYCVSCC+ P + L  E+ LN   +A           F+ C  +CR +
Sbjct:   118 GC-LSSGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTS 176

Query:    70 SESVVHENAYLSDF-HHCF 87
             S+SV HEN Y      +C+
Sbjct:   177 SQSVQHENTYRDPIAKYCY 195


>UNIPROTKB|Q9H741 [details] [associations]
            symbol:C12orf49 "UPF0454 protein C12orf49" species:9606
            "Homo sapiens" [GO:0005576 "extracellular region" evidence=IEA]
            GO:GO:0005576 HOVERGEN:HBG097587 OMA:LGYICER InterPro:IPR019352
            PANTHER:PTHR13481 Pfam:PF10218 eggNOG:NOG237537
            HOGENOM:HOG000044706 OrthoDB:EOG4XD3S2 EMBL:AK025068 EMBL:AK222983
            EMBL:BC019843 IPI:IPI00015479 RefSeq:NP_079014.1 UniGene:Hs.592011
            ProteinModelPortal:Q9H741 IntAct:Q9H741 STRING:Q9H741 DMDM:74733622
            PRIDE:Q9H741 Ensembl:ENST00000261318 GeneID:79794 KEGG:hsa:79794
            UCSC:uc001tvz.1 CTD:79794 GeneCards:GC12M117153 HGNC:HGNC:26128
            HPA:HPA026905 neXtProt:NX_Q9H741 PharmGKB:PA128394721
            InParanoid:Q9H741 PhylomeDB:Q9H741 GenomeRNAi:79794 NextBio:69328
            ArrayExpress:Q9H741 Bgee:Q9H741 CleanEx:HS_C12orf49
            Genevestigator:Q9H741 Uniprot:Q9H741
        Length = 205

 Score = 141 (54.7 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 31/89 (34%), Positives = 47/89 (52%)

Query:     2 LPRERREILLGCNLLSQCCNSYEYCVSCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVF 59
             +P  ++    GC   + CC++YEYCVSCC+ P + L  E+ LN   +A           F
Sbjct:   108 VPSTKQYCCDGC-WPNGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHF 166

Query:    60 DFCAGRCRHNSESVVHENAYLSDF-HHCF 87
             + C  +CR +S+SV HEN Y      +C+
Sbjct:   167 ELCLAKCRTSSQSVQHENTYRDPIAKYCY 195


>UNIPROTKB|Q5ZJE4 [details] [associations]
            symbol:RCJMB04_18o22 "UPF0454 protein C12orf49 homolog"
            species:9031 "Gallus gallus" [GO:0005576 "extracellular region"
            evidence=IEA] GO:GO:0005576 GeneTree:ENSGT00390000008031
            HOVERGEN:HBG097587 OMA:LGYICER InterPro:IPR019352 PANTHER:PTHR13481
            Pfam:PF10218 EMBL:AJ720490 IPI:IPI00599851 RefSeq:NP_001007842.1
            UniGene:Gga.22617 Ensembl:ENSGALT00000013379 GeneID:417026
            KEGG:gga:417026 CTD:417026 eggNOG:NOG237537 HOGENOM:HOG000044706
            InParanoid:Q5ZJE4 OrthoDB:EOG4XD3S2 NextBio:20820406 Uniprot:Q5ZJE4
        Length = 205

 Score = 140 (54.3 bits), Expect = 6.8e-09, P = 6.8e-09
 Identities = 31/83 (37%), Positives = 45/83 (54%)

Query:    10 LLGCN--LLSQCCNSYEYCVSCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGR 65
             L  C+  L + CC+ YEYCVSCC+ P++  L E+ LN   +A           F+ C  +
Sbjct:   113 LYSCDSCLPNGCCSVYEYCVSCCLQPSKQHLLERFLNRAAMAFQNLFMAVEDRFELCLAK 172

Query:    66 CRHNSESVVHENAYLSDF-HHCF 87
             CR +S+SV HEN Y      +C+
Sbjct:   173 CRTSSQSVQHENTYRDPIAKYCY 195


>ZFIN|ZDB-GENE-050522-367 [details] [associations]
            symbol:zgc:110063 "zgc:110063" species:7955 "Danio
            rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=IEA] ZFIN:ZDB-GENE-050522-367
            GO:GO:0005576 HOVERGEN:HBG097587 InterPro:IPR019352
            PANTHER:PTHR13481 Pfam:PF10218 eggNOG:NOG237537
            HOGENOM:HOG000044706 OrthoDB:EOG4XD3S2 EMBL:BC095168
            IPI:IPI00607345 RefSeq:NP_001018573.1 UniGene:Dr.85020
            GeneID:553772 KEGG:dre:553772 InParanoid:Q503V3 NextBio:20880494
            ArrayExpress:Q503V3 Uniprot:Q503V3
        Length = 199

 Score = 136 (52.9 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 32/90 (35%), Positives = 48/90 (53%)

Query:     3 PRERREILLGCNLLSQCCNSYEYCVSCCVNPART-LKEQVLNVKIAKPTTAGTYGSV--- 58
             P   + +   C L + CC+ YEYCVSCC+ P +  L E+ LN   A       + +V   
Sbjct:   103 PSSSQYVCKSC-LSNGCCSIYEYCVSCCLQPDKQPLLERFLNR--AAEGFQNLFTAVEDH 159

Query:    59 FDFCAGRCRHNSESVVHENAYLS-DFHHCF 87
             F+ C  +CR +S+SV HEN Y +    +C+
Sbjct:   160 FELCLAKCRTSSQSVQHENTYRNPQAKYCY 189


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.133   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      204       204   0.00094  111 3  11 22  0.44    32
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  180 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.60u 0.12s 18.72t   Elapsed:  00:00:01
  Total cpu time:  18.60u 0.12s 18.72t   Elapsed:  00:00:01
  Start:  Sat May 11 10:01:55 2013   End:  Sat May 11 10:01:56 2013

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