BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028765
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia
oleracea GN=PSBP PE=1 SV=1
Length = 267
Score = 288 bits (736), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 178/268 (66%), Gaps = 65/268 (24%)
Query: 1 MASTQCFLHHHALSTTPA--RTSSSQRHVS-NIKPTQIVCRAQKQAVQEDD--GSAVSRR 55
MAST CFLHHHA ++PA R S++QR+ + +IKP QIVC+AQKQ E + S VSRR
Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDDNEANVLNSGVSRR 60
Query: 56 LALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKE 115
LALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPK NT+F+PYNGDGFKL +PSKWNPSKE
Sbjct: 61 LALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKE 120
Query: 116 REFPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS---------------- 148
+EFPGQVLRYEDNFD+ +N L V+P P FLS
Sbjct: 121 KEFPGQVLRYEDNFDATSN-LSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTD 179
Query: 149 --------------------------------VLTRTADGDEGGKHQLITATVKGGKLYI 176
VLTRTADGDEGGKHQ+I ATVK GKLYI
Sbjct: 180 SEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYI 239
Query: 177 CKAQAGDKRWFKGTRKYVESTASSFSVA 204
CKAQAGDKRWFKG +K+VES SSFSVA
Sbjct: 240 CKAQAGDKRWFKGAKKFVESATSSFSVA 267
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis
sativus GN=PSBP PE=2 SV=1
Length = 263
Score = 288 bits (736), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/265 (60%), Positives = 175/265 (66%), Gaps = 63/265 (23%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIK-PTQIVCRAQKQA-VQEDDGSAVSRRLAL 58
MAST CFLHHHAL T AR+SSS R + K P +VCRAQKQ QE++G VSRRLAL
Sbjct: 1 MASTSCFLHHHAL-TAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLAL 59
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
TVLIGAAA+GSKVSPADAAYGE+ANVFGKPK+NTD+LPY+GDGFKLSIPSKWNPSKEREF
Sbjct: 60 TVLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREF 119
Query: 119 PGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS------------------- 148
PGQVLRYEDNFDSN+N L + P P FLS
Sbjct: 120 PGQVLRYEDNFDSNSN-LSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQAYFGKTASEG 178
Query: 149 -----------VLTRTA------------------DGDEGGKHQLITATVKGGKLYICKA 179
+L TA DGDEGGKHQLITATV GKLYICKA
Sbjct: 179 GFDPDAVATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKLYICKA 238
Query: 180 QAGDKRWFKGTRKYVESTASSFSVA 204
QAGDKRWFKG RK+VE ASSFSVA
Sbjct: 239 QAGDKRWFKGARKFVEGAASSFSVA 263
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
tuberosum GN=PSBP PE=2 SV=1
Length = 260
Score = 287 bits (735), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/263 (58%), Positives = 175/263 (66%), Gaps = 65/263 (24%)
Query: 2 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
ASTQCFLH +HAL ++PARTSS V + KP Q++CRAQKQ + +AVSRRLALT+
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VPSPKPNQLICRAQKQDDANNTSNAVSRRLALTL 58
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL IP+KWNPSKE EFPG
Sbjct: 59 LIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPG 118
Query: 121 QVLRYEDNFDSNTNILEASVRP-----------PYYFLS--------------------- 148
QVLRYEDNFDS +N++ A V P P FLS
Sbjct: 119 QVLRYEDNFDSTSNLMVA-VTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEGGF 177
Query: 149 ---------------------------VLTRTADGDEGGKHQLITATVKGGKLYICKAQA 181
VLTRTADGDEGGKHQLITATV GKLYICKAQA
Sbjct: 178 ESGAVATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQA 237
Query: 182 GDKRWFKGTRKYVESTASSFSVA 204
GDKRWFKG +K+VE+ A+SFS+A
Sbjct: 238 GDKRWFKGAKKFVENAATSFSIA 260
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum
lycopersicum GN=PSBP PE=2 SV=1
Length = 258
Score = 285 bits (729), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/265 (59%), Positives = 177/265 (66%), Gaps = 71/265 (26%)
Query: 2 ASTQCFLH-HHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS--AVSRRLAL 58
ASTQCFLH +HAL ++PARTSS VS+ KP Q++CRAQKQ DD S AVSRRLAL
Sbjct: 3 ASTQCFLHQYHALRSSPARTSS----VSSPKPNQLICRAQKQ----DDASNAAVSRRLAL 54
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
T+LIG AA+GSKVSPADAAYGE+ANVFGKPK NTDFLPYNGDGFKL +P+KWNPSKE E+
Sbjct: 55 TLLIGTAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEY 114
Query: 119 PGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS------------------- 148
PGQVLRYEDNFDS +N++ A V P P FLS
Sbjct: 115 PGQVLRYEDNFDSTSNLIVA-VTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFGKTDSEG 173
Query: 149 -----------------------------VLTRTADGDEGGKHQLITATVKGGKLYICKA 179
VLTRTADGDEGGKHQLITATV GKLYICKA
Sbjct: 174 GFESGAVATRNLLEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKA 233
Query: 180 QAGDKRWFKGTRKYVESTASSFSVA 204
QAGDKRWFKG +K+VE+ A+SFS+A
Sbjct: 234 QAGDKRWFKGAKKFVENAATSFSIA 258
>sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana
tabacum GN=PSBP2 PE=1 SV=2
Length = 265
Score = 283 bits (725), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/267 (59%), Positives = 180/267 (67%), Gaps = 65/267 (24%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQ-AVQEDD--GSAVSRRL 56
MASTQCFLHHHALST PART + V ++KP Q+ VCRAQKQ A QED+ +VSRRL
Sbjct: 1 MASTQCFLHHHALST-PARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRL 59
Query: 57 ALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKER 116
ALTVLIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE
Sbjct: 60 ALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEV 119
Query: 117 EFPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS----------------- 148
E+PGQVLR+EDNFD+ +N++ A + P P FLS
Sbjct: 120 EYPGQVLRFEDNFDATSNVIVA-ITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDS 178
Query: 149 -------------------------------VLTRTADGDEGGKHQLITATVKGGKLYIC 177
VLTRTADG+EGGKHQLITATV GKLYIC
Sbjct: 179 EGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITATVNDGKLYIC 238
Query: 178 KAQAGDKRWFKGTRKYVESTASSFSVA 204
KAQAGDKRWFKG +K+VE+TA+SFS+A
Sbjct: 239 KAQAGDKRWFKGAKKFVENTATSFSLA 265
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis
thaliana GN=PSBP1 PE=1 SV=2
Length = 263
Score = 279 bits (713), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/266 (59%), Positives = 178/266 (66%), Gaps = 65/266 (24%)
Query: 1 MASTQCFLHHHALSTTPARTSSS---QRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLA 57
MA + CFLH AL+++ AR+SSS QRHVS KP QI+C+AQ+ EDD SAVSRRLA
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQS--HEDDNSAVSRRLA 58
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDFLPYNGDGFK+ +P+KWNPSKE E
Sbjct: 59 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIE 118
Query: 118 FPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS------------------ 148
+PGQVLR+EDNFD+ +N L V P P FLS
Sbjct: 119 YPGQVLRFEDNFDATSN-LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASE 177
Query: 149 ------------------------------VLTRTADGDEGGKHQLITATVKGGKLYICK 178
VLTRTADGDEGGKHQLITATV GGKLYICK
Sbjct: 178 GGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICK 237
Query: 179 AQAGDKRWFKGTRKYVESTASSFSVA 204
AQAGDKRWFKG RK+VES A+SFSVA
Sbjct: 238 AQAGDKRWFKGARKFVESAATSFSVA 263
>sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana
tabacum GN=PSBP1 PE=3 SV=2
Length = 268
Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/269 (58%), Positives = 182/269 (67%), Gaps = 66/269 (24%)
Query: 1 MASTQCFLHHHALSTTPARTS---SSQRHVSNIKPTQIVCRAQKQAV-QEDDGSAV--SR 54
MASTQCFLH HALS++ ART+ SSQR+VS++KP Q+VCRAQKQ+ QEDDG++V SR
Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60
Query: 55 RLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSK 114
RLALTVLIGAAA+GSKVSPADAAYGE+ANVFGKPK NTDFL YNGDGFKL +P+KWNPSK
Sbjct: 61 RLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSK 120
Query: 115 EREFPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLSVL------------- 150
E EFPGQVLRYEDNFDS +N++ +V P P FL+ +
Sbjct: 121 EVEFPGQVLRYEDNFDSTSNLI-VTVTPTDKKSITDYGSPEEFLTQVDFLLGKQAYFGKT 179
Query: 151 --------------------TRTADGDE---------------GGKHQLITATVKGGKLY 175
+ T G E GGKHQLI+ATV GGKLY
Sbjct: 180 DSEGGFESGAVATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKLY 239
Query: 176 ICKAQAGDKRWFKGTRKYVESTASSFSVA 204
ICKAQAGDKRWFKG RK+VE+ A+SFSVA
Sbjct: 240 ICKAQAGDKRWFKGARKFVENAATSFSVA 268
>sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana
tabacum GN=PSBP3 PE=2 SV=1
Length = 266
Score = 275 bits (702), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/268 (56%), Positives = 179/268 (66%), Gaps = 66/268 (24%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQ--AVQEDD--GSAVSRR 55
MASTQCFLHHHALST PARTS + V ++K Q+ VCRAQ + A Q+D+ +VSRR
Sbjct: 1 MASTQCFLHHHALST-PARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRR 59
Query: 56 LALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKE 115
LALT+LIGAAAVGSKVSPADAAYGE+ANVFGKPKT+TDF YNGDGFKL IPSKWNP+KE
Sbjct: 60 LALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKE 119
Query: 116 REFPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS---------------- 148
E+PGQVLR+EDNFD+ +N++ A + P P FLS
Sbjct: 120 VEYPGQVLRFEDNFDATSNVIVA-ITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTD 178
Query: 149 --------------------------------VLTRTADGDEGGKHQLITATVKGGKLYI 176
+LTRTADG+EGGKHQL+TATV GKLYI
Sbjct: 179 SEGGFESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYI 238
Query: 177 CKAQAGDKRWFKGTRKYVESTASSFSVA 204
CKAQAGDKRWFKG +K+VE+TA+SFS+A
Sbjct: 239 CKAQAGDKRWFKGAKKFVENTATSFSLA 266
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria
agrestis GN=PSBP PE=2 SV=1
Length = 264
Score = 269 bits (687), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 171/266 (64%), Gaps = 64/266 (24%)
Query: 1 MASTQCFLHHHALSTTPARTS--SSQRHVSNIKPTQIVCRAQKQA-VQEDDGSAVSRRLA 57
MAS+ CFL HHA ST PA TS S R V IKP+Q++CRAQK + E+ +AVSRRLA
Sbjct: 1 MASSACFLLHHAPST-PATTSRTPSHRLVPTIKPSQLICRAQKSSDTDENSSTAVSRRLA 59
Query: 58 LTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE 117
LT+LIG+AAVG+K++PA+AAYGE+ANVFGK KTNTDFLPY GDGF L IP+KWNPSKE E
Sbjct: 60 LTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVE 119
Query: 118 FPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS------------------ 148
FPGQVLRYEDNFD +N+ +V P P FLS
Sbjct: 120 FPGQVLRYEDNFDVTSNV-SVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSGKTASE 178
Query: 149 ------------------------------VLTRTADGDEGGKHQLITATVKGGKLYICK 178
VLTRTADGDEGGKH +I+ATV GKLYICK
Sbjct: 179 GGFDPDSVATANILEVSTPVVGGKQYYNISVLTRTADGDEGGKHHVISATVTDGKLYICK 238
Query: 179 AQAGDKRWFKGTRKYVESTASSFSVA 204
AQAGDKRWFKG +K+VEST +SF+VA
Sbjct: 239 AQAGDKRWFKGAKKFVESTTTSFNVA 264
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba
GN=PSBP PE=2 SV=2
Length = 260
Score = 253 bits (646), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 166/263 (63%), Gaps = 62/263 (23%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
MA + CFLH AL+++ AR+S S + +++VC+AQ+ E+D S VSRRLALT+
Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISKLVCKAQQ--THEEDNSTVSRRLALTL 58
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
L+GAAAVGSKVSPADAAYGE+ANVFGKPK NTDF Y+GDGF++ +P+KWNPS+E E+PG
Sbjct: 59 LVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPG 118
Query: 121 QVLRYEDNFDSNTNILEASVRP-----------PYYFLS--------------------- 148
QVLRYEDNFD+ +N L V P P FLS
Sbjct: 119 QVLRYEDNFDATSN-LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF 177
Query: 149 ---------------------------VLTRTADGDEGGKHQLITATVKGGKLYICKAQA 181
VLTRTADGDEGGKHQLITATV GGKLYICKAQA
Sbjct: 178 DNNAVATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQA 237
Query: 182 GDKRWFKGTRKYVESTASSFSVA 204
GDKRWFKG K+VE A+SFSVA
Sbjct: 238 GDKRWFKGANKFVEKAATSFSVA 260
>sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum
GN=PSBP PE=1 SV=1
Length = 259
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 160/262 (61%), Gaps = 61/262 (23%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
MASTQCFLHH TTP RT S QR V KP IVC+AQKQ D + VSRRLAL+V
Sbjct: 1 MASTQCFLHHQYAITTPTRTLS-QRQVVTTKPNHIVCKAQKQDDVVD--AVVSRRLALSV 57
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
LIGAAAVGSKVSPADAAYGE+ANVFGK KTNTD+LPYNGDGFKL +P+KWNPSKEREFPG
Sbjct: 58 LIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG 117
Query: 121 QVLRYEDNFD--SNTNILEASVR--------PPYYFLS----VLTRTA-----DGDEGGK 161
QVLRYEDNFD SN ++L + P FLS +L + A D + G
Sbjct: 118 QVLRYEDNFDATSNVSVLVQTTDKKSITDYGSPEEFLSKVDYLLGKQAFFGQTDSEGGFD 177
Query: 162 HQLI--------TATVKGGKLY-------------------------------ICKAQAG 182
+ +A V GGK Y ICKAQAG
Sbjct: 178 TNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQAG 237
Query: 183 DKRWFKGTRKYVESTASSFSVA 204
DKRWFKG RK+VE TASSFSVA
Sbjct: 238 DKRWFKGARKFVEDTASSFSVA 259
>sp|P85189|PSBP_HELAN Oxygen-evolving enhancer protein 2, chloroplastic OS=Helianthus
annuus GN=PSBP PE=1 SV=1
Length = 263
Score = 236 bits (603), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 164/269 (60%), Gaps = 71/269 (26%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQ------RHVSNIKPTQIVCRAQKQAVQEDDGSAVSR 54
MA+ CF HALST PAR+SSS R + IKP Q++ R+QK+ + +A+SR
Sbjct: 1 MAAASCF---HALST-PARSSSSSLQSSSSRLPAPIKPNQLIIRSQKREETATNDAAISR 56
Query: 55 RLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSK 114
RLALTVLIGAAAVG+KVSPADAAYGE+ANVFGK K+ T+F Y G GFKLS+P+KWNPSK
Sbjct: 57 RLALTVLIGAAAVGTKVSPADAAYGEAANVFGKQKS-TEFSQYTGPGFKLSVPAKWNPSK 115
Query: 115 EREFPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS--------------- 148
E E+PGQVLRYEDNFD+ +N L V P P FLS
Sbjct: 116 EVEYPGQVLRYEDNFDTTSN-LAVMVTPTDKKAITDYGAPEEFLSKVDYLLGKQAYFGKT 174
Query: 149 ---------------------------------VLTRTADGDEGGKHQLITATVKGGKLY 175
VLTRTADGDEGGKHQLI+ATV GKLY
Sbjct: 175 ASEGGFEQDAVATANILEVATPTVDGKQYYFLSVLTRTADGDEGGKHQLISATVSDGKLY 234
Query: 176 ICKAQAGDKRWFKGTRKYVESTASSFSVA 204
ICKAQAGDKRWFKG RKYVE + S SVA
Sbjct: 235 ICKAQAGDKRWFKGARKYVEGSTSFISVA 263
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment)
OS=Brassica juncea GN=PSBP PE=2 SV=1
Length = 217
Score = 231 bits (588), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 138/218 (63%), Gaps = 60/218 (27%)
Query: 46 EDDGSAVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLS 105
EDD S VSRRLALT+L+GAAAVGSKVSPADAAYGE+ANVFGKPKTNTDF NGDGF++
Sbjct: 1 EDDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQ 60
Query: 106 IPSKWNPSKEREFPGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS------ 148
+P+KWNPS+E E+PGQVLRYEDNFD+ +N L V P P FLS
Sbjct: 61 VPAKWNPSREVEYPGQVLRYEDNFDATSN-LNVMVTPTDKKSITDYGSPEEFLSQVNYLL 119
Query: 149 ------------------------------------------VLTRTADGDEGGKHQLIT 166
VLTRTAD DEGGKHQLIT
Sbjct: 120 GKQAYFGETACEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLIT 179
Query: 167 ATVKGGKLYICKAQAGDKRWFKGTRKYVESTASSFSVA 204
ATV GGKLYICKAQAGDKRWFKG K+VE A+SFSVA
Sbjct: 180 ATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 217
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus
pseudonarcissus GN=PSBP PE=2 SV=1
Length = 265
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/263 (50%), Positives = 149/263 (56%), Gaps = 75/263 (28%)
Query: 1 MASTQCFLHHHA-------LSTTPA---RTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGS 50
MAST CFLHHHA LS T + R Q H + ++ + C + A+
Sbjct: 1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDAL------ 54
Query: 51 AVSRRLALTVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKW 110
+SRRLALT+LIG AA+GS+VS ADAAYGESANVFGKPKTNTDF GDGFK+ IPSKW
Sbjct: 55 -LSRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKW 113
Query: 111 NPSKEREFPGQVLRYEDN------------------------------------------ 128
NPSKE EFPGQVLRYEDN
Sbjct: 114 NPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYF 173
Query: 129 --------FDSNT----NILEASV----RPPYYFLSVLTRTADGDEGGKHQLITATVKGG 172
F+ N NILE S YY + VLTRTADGDEGGKH LITATV G
Sbjct: 174 GKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDG 233
Query: 173 KLYICKAQAGDKRWFKGTRKYVE 195
KLYICKAQAGDKRWFKG +K+VE
Sbjct: 234 KLYICKAQAGDKRWFKGAKKFVE 256
>sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum
aestivum GN=PSBP PE=2 SV=1
Length = 258
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/265 (50%), Positives = 156/265 (58%), Gaps = 68/265 (25%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQI-VCRAQKQAVQEDDGSAV-SRRLAL 58
MAST CFLH + AR ++S R + TQ+ VC+AQK D + V SRR AL
Sbjct: 1 MASTSCFLHQ-----STARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAAL 55
Query: 59 TVLIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREF 118
++L GAAA+ KVSPA AAYGE+ANVFGK K NTDF+ Y+G+GFKL IP+KWNPSKEREF
Sbjct: 56 SLLAGAAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREF 115
Query: 119 PGQVLRYEDNFDSNTNILEASVRP-----------PYYFLS------------------- 148
PGQVLRYEDNFD+ +N L + P P FLS
Sbjct: 116 PGQVLRYEDNFDATSN-LSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSEG 174
Query: 149 -----------------------------VLTRTADGDEGGKHQLITATVKGGKLYICKA 179
VLTRTADGDEGGKHQLITATV GKLY+CKA
Sbjct: 175 GFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKA 234
Query: 180 QAGDKRWFKGTRKYVESTASSFSVA 204
Q DKRWFKG +K+VE+ A SFSVA
Sbjct: 235 QR-DKRWFKGAKKFVENAAGSFSVA 258
>sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis
thaliana GN=PSBP2 PE=5 SV=3
Length = 125
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 8/87 (9%)
Query: 126 EDNFDSNT----NILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYIC 177
E FD+N NILE S + YY+LSVLTRTADGDEGGKHQLITATV GGKLYIC
Sbjct: 39 EGGFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYIC 98
Query: 178 KAQAGDKRWFKGTRKYVESTASSFSVA 204
KAQAGDKRWFKG RK+VE+ A+SFSVA
Sbjct: 99 KAQAGDKRWFKGARKFVENAATSFSVA 125
>sp|P11471|PSBP_CHLRE Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas
reinhardtii GN=PSBP PE=2 SV=1
Length = 245
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 122/263 (46%), Gaps = 79/263 (30%)
Query: 1 MASTQCFLHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTV 60
MA+ C + A + P +S+R + +V RA GS VSRR AL
Sbjct: 1 MATALC---NKAFAAAPVARPASRR-------SAVVVRAS--------GSDVSRRAALAG 42
Query: 61 LIGAAAVGSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKEREFPG 120
GAAA+ S SPA+AAYG+SANVFGK + F+PY GDGF L +P+KWNPSKE +FPG
Sbjct: 43 FAGAAALVSS-SPANAAYGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPG 101
Query: 121 QVLRYEDNFDSNTNIL-----------------EASVRPPYYFL---------------- 147
+LRYEDNFD+ N++ + + Y L
Sbjct: 102 VILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFLESVSYLLGKQAYSGETQSEGGFA 161
Query: 148 -------SVLTRTADGDEGG----KHQLITATVKG----------------GKLYICKAQ 180
S+L + D+ G K++L+ + G KLYI K Q
Sbjct: 162 PNRVSAASLLDVSTTTDKKGKTYYKYELLVRSADGDEGGRHQLIGATVGSDNKLYIIKIQ 221
Query: 181 AGDKRWFKGTRKYVESTASSFSV 203
GDKRWFKG +K SF+V
Sbjct: 222 IGDKRWFKGAKKEAMGAFDSFTV 244
>sp|P83687|PSBP_EUGGR Oxygen-evolving enhancer protein 2 (Fragment) OS=Euglena gracilis
GN=PSBP PE=1 SV=1
Length = 30
Score = 33.5 bits (75), Expect = 0.96, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 77 AYGESANVFGKPKTNTDFLPYNGDGF 102
AYGE ANVFGK K F +GDG+
Sbjct: 1 AYGEGANVFGKRKETDQFFEISGDGW 26
>sp|Q8TYT7|PYRG_METKA CTP synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM
9639 / NBRC 100938) GN=pyrG PE=3 SV=1
Length = 535
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 9 HHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLAL 58
H H L T P + S + I+P IVCR ++ DDG V R++AL
Sbjct: 182 HVHELKTKPTQHSVKELRSLGIQPDAIVCRCERPL---DDG--VKRKIAL 226
>sp|P80660|PSBP1_PHYPA Oxygen-evolving enhancer protein 2 (Fragments) OS=Physcomitrella
patens subsp. patens PE=1 SV=1
Length = 43
Score = 31.6 bits (70), Expect = 3.8, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Query: 89 KTNTDFLPYNGDGFKLSIP---SKWNPSKEREFPGQVLRYEDNFDSNTNIL 136
K T F P+ G+GF L +P +++ P + + EDNFD+ N+
Sbjct: 1 KKQTGFTPFIGNGFSLDVPXSITEYGPXE---------KXEDNFDATNNLF 42
>sp|B0SQ07|TAL_LEPBP Probable transaldolase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=tal PE=3 SV=1
Length = 214
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 117 EFPGQVLRYEDNFDSNTNILEASVRPPYYFLSVLTRTAD 155
E ++ DN+ T IL ASVR P +F V R AD
Sbjct: 142 ELISEIREIYDNYGIETQILAASVRHPIHFKEVALRGAD 180
>sp|B0SGW0|TAL_LEPBA Probable transaldolase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=tal PE=3 SV=1
Length = 214
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 117 EFPGQVLRYEDNFDSNTNILEASVRPPYYFLSVLTRTAD 155
E ++ DN+ T IL ASVR P +F V R AD
Sbjct: 142 ELISEIREIYDNYGIETQILAASVRHPIHFKEVALRGAD 180
>sp|Q92FR7|ARCA_LISIN Arginine deiminase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=arcA PE=3 SV=1
Length = 408
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 68 GSKVSPADAAYGESANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE--FPGQVLRY 125
G +++P A V G P+ DF+P G+ +S +WN PG+V+ Y
Sbjct: 306 GLEITPRRDFKRVIAEVLGVPEV--DFIPCGGEDVIVSAREQWNDGANTLAIAPGEVITY 363
Query: 126 EDNFDSNTNILEASVRPPYYFLSVLTRTADG 156
+ N SN + +A ++ S L+R G
Sbjct: 364 DRNHVSNDLLRKAGIKVHEVISSELSRGRGG 394
>sp|Q73IW9|RPOBC_WOLPM Bifunctional DNA-directed RNA polymerase subunit beta-beta'
OS=Wolbachia pipientis wMel GN=rpoBC PE=3 SV=1
Length = 2837
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 8 LHHHALSTTPARTSSSQRHVSNIKPTQIVCRAQKQAVQEDDGSAVSRRLALTVLIGAAAV 67
L+HH T ++ R + ++ P +I+ R +K+ +QE S T++ A AV
Sbjct: 1697 LNHHY--RTIINRNNRLRKLLSLNPPEIMIRNEKRMLQEAVDSLFDNSRRNTLVNKAGAV 1754
Query: 68 GSKVSPADAAYGESA----NVFGK 87
G K S +D G+ N+ GK
Sbjct: 1755 GYKKSISDMLKGKQGRFRQNLLGK 1778
>sp|B8DAM3|ARCA_LISMH Arginine deiminase OS=Listeria monocytogenes serotype 4a (strain
HCC23) GN=arcA PE=3 SV=1
Length = 410
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 82 ANVFGKPKTNTDFLPYNGDGFKLSIPSKWNPSKERE--FPGQVLRYEDNFDSNTNILEAS 139
A V G+P+ DF+P G+ +S +WN PG+V+ Y+ N SN + A
Sbjct: 322 AEVLGEPEV--DFIPCGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAG 379
Query: 140 VRPPYYFLSVLTRTADG 156
++ S L+R G
Sbjct: 380 IKVHEVISSELSRGRGG 396
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,341,522
Number of Sequences: 539616
Number of extensions: 3165031
Number of successful extensions: 6306
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6240
Number of HSP's gapped (non-prelim): 48
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)