Query 028771
Match_columns 204
No_of_seqs 155 out of 2020
Neff 9.9
Searched_HMMs 29240
Date Tue Mar 26 18:26:59 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/028771.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2262-2266//hhsearch_pdb/028771hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x7b_A N-acetyltransferase SSO 1.0 1 1 145.8 17.8 150 17-167 10-168 (168)
2 2ob0_A Human MAK3 homolog; ace 1.0 1 1 136.7 20.1 153 18-172 5-160 (170)
3 2cnt_A Modification of 30S rib 1.0 1 1 132.8 17.5 147 22-173 3-152 (160)
4 1tiq_A Protease synthase and s 1.0 1 1 132.6 18.8 147 23-169 5-173 (180)
5 3kkw_A Putative uncharacterize 1.0 1 1 132.5 17.8 147 18-168 23-181 (182)
6 4h89_A GCN5-related N-acetyltr 1.0 1 1 130.7 18.8 150 17-167 6-173 (173)
7 1mk4_A Hypothetical protein YQ 1.0 1 1 129.3 10.9 143 24-167 5-157 (157)
8 2r7h_A Putative D-alanine N-ac 1.0 1 1 127.1 19.3 151 17-168 17-177 (177)
9 2ree_A CURA; GNAT, S-acetyltra 1.0 1 1 125.4 18.4 153 17-170 10-209 (224)
10 1u6m_A Acetyltransferase, GNAT 1.0 1 1 124.5 16.8 146 22-170 3-192 (199)
No 1
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus}
Probab=1.00 E-value=1 Score=145.85 Aligned_cols=150 Identities=26% Similarity=0.400 Sum_probs=125.4
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEECCCC--------CCCEE
Q ss_conf 8883895438989768999999855299840989999986189859999989959999998843878--------87469
Q 028771 17 PPEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPHLSFLAFHKGKCVGTVVCKMGEHR--------STFRG 88 (204)
Q Consensus 17 ~~~~~~~~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~--------~~~~~ 88 (204)
...+.++. .+.+|++.+.++....+..+++...+...+...+..++++..+|++||++.+...... ....+
T Consensus 10 ~~~~~iR~-~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~ 88 (168)
T 2x7b_A 10 GRDFTLRN-ARMDDIDQIIKINRLTLPENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKG 88 (168)
T ss_dssp --CCEEEE-CCGGGHHHHHHHHHHHCSCCCCHHHHHHHHHHHGGGCEEEEETTEEEEEEEEEEEEEECSSCSSCCEEEEE
T ss_pred CCCEEEEE-CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCCCEE
T ss_conf 86379996-89899999999999877987528999999866995699999899589999999814654211135787479
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCC
Q ss_conf 9999985832104997999999999999980-982999997639988899998789888267742124885605576157
Q 028771 89 YIAMLVVIKPYRGRGIATELVTRSIKVMMES-GCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLLF 167 (204)
Q Consensus 89 ~i~~i~V~p~~Rg~Gig~~ll~~~~~~~~~~-g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~~m~~~l 167 (204)
+|..++|+|+|||+|+|+.|++++++++++. |+..+.+.|...|.+|++||+|+||+..+....++.++.+.++|.+.+
T Consensus 89 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~~~~~~~g~~~~~m~~~l 168 (168)
T 2x7b_A 89 HVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLKGYYADGEDAYLMARPL 168 (168)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCEEEEEETTCSTTSCCEEEEEEC-
T ss_pred EEEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEECC
T ss_conf 99999988888556799999999999998756916999999908799999999779989987602247998279999469
No 2
>2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A*
Probab=1.00 E-value=1 Score=136.67 Aligned_cols=153 Identities=23% Similarity=0.386 Sum_probs=130.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEECC
Q ss_conf 88389543898976899999985529984098999998618985999998995999999884387887469999998583
Q 028771 18 PEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPHLSFLAFHKGKCVGTVVCKMGEHRSTFRGYIAMLVVIK 97 (204)
Q Consensus 18 ~~~~~~~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~~~i~~i~V~p 97 (204)
..+.++.. +.+|++.+.++....+...++...+...+.. +...++++.+|++||++.+..........++|..++|+|
T Consensus 5 ~~~~ir~~-~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~i~~~~v~p 82 (170)
T 2ob0_A 5 SRIELGDV-TPHNIKQLKRLNQVIFPVSYNDKFYKDVLEV-GELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLA 82 (170)
T ss_dssp CSEEEEEC-CTTTHHHHHHHHHHHCSSCCCHHHHHHHTTS-GGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEECG
T ss_pred CCEEEEEC-CHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC-CCCEEEEEECCEEEEEEEEEEEECCCCCEEEEEEEEECH
T ss_conf 86799978-7766999999999772600589999999638-983799999995899999998705787689999998898
Q ss_pred CCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCC--CCEEEEECCCCCCCC
Q ss_conf 2104997999999999999980-98299999763998889999878988826774212488--560557615788878
Q 028771 98 PYRGRGIATELVTRSIKVMMES-GCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNG--VDAFRLKLLFPCPEI 172 (204)
Q Consensus 98 ~~Rg~Gig~~ll~~~~~~~~~~-g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~~~--~~~~~m~~~l~~~~~ 172 (204)
+|||+|+|+.|+..+++++++. |+..+.+.+...|.++++||+|+||+.++....++.++ .+.++|.+.++....
T Consensus 83 ~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~g~~~~~~~m~~~l~~~~~ 160 (170)
T 2ob0_A 83 PYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKNYYKRIEPADAHVLQKNLKVPSG 160 (170)
T ss_dssp GGTTSSHHHHHHHHHHHHHHHHCCCSEEEEEEETTCHHHHHHHHHTTCEEEEEETTCCSSSSSCCEEEEEEEC-----
T ss_pred HHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCC
T ss_conf 882768899999999999986679558999996288899999998499796765040627998860888985168755
No 3
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=1.00 E-value=1 Score=132.79 Aligned_cols=147 Identities=21% Similarity=0.218 Sum_probs=124.8
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCC
Q ss_conf 95438989768999999855299840989999986189859999989959999998843878874699999985832104
Q 028771 22 YVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPHLSFLAFHKGKCVGTVVCKMGEHRSTFRGYIAMLVVIKPYRG 101 (204)
Q Consensus 22 ~~~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~~~i~~i~V~p~~Rg 101 (204)
.++..+.+|++.+.++....+..+|+...+...+.. +...+++..+|++||++.+.... ..++|..++|+|++||
T Consensus 3 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~vG~~~~~~~~----~~~~i~~~~v~p~~rg 77 (160)
T 2cnt_A 3 TISILSTTDLPAAWQIEQRAHAFPWSEKTFFGNQGE-RYLNLKLTADDRMAAFAITQVVL----DEATLFNIAVDPDFQR 77 (160)
T ss_dssp EEEECCGGGHHHHHHHHHHHCSSCCCHHHHHHSCST-TBCCEEEEETTEEEEEEEEEEET----TEEEEEEEEECGGGCS
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC-CCCEEEEEECCEEEEEEEEEECC----CCEEEEEEEECHHHCC
T ss_conf 898399889999999997425668999999987426-86189999899589999999538----9469999999978848
Q ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCC--CC-CCEEEEECCCCCCCCC
Q ss_conf 997999999999999980982999997639988899998789888267742124--88-5605576157888788
Q 028771 102 RGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYL--NG-VDAFRLKLLFPCPEIH 173 (204)
Q Consensus 102 ~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~--~~-~~~~~m~~~l~~~~~~ 173 (204)
+|+|+.|+..+++++++.|+..+.+.+...|.+|++||+|+||+.++....++. ++ .+.++|.+..+..+..
T Consensus 78 ~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 152 (160)
T 2cnt_A 78 RGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQGHEDAIIMALPISMKLHH 152 (160)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECCCCCC-
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEEEEEECHHHHHC
T ss_conf 887999999999999986995899998448789999999879989888820151589985479998500012210
No 4
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=1.00 E-value=1 Score=132.63 Aligned_cols=147 Identities=14% Similarity=0.190 Sum_probs=112.6
Q ss_pred EECCCCCCHHHHHHHHHHHCC----CCCHHH-------------HHHHHHHHCCCEEEEEEECCEEEEEEEEEECCC---
Q ss_conf 543898976899999985529----984098-------------999998618985999998995999999884387---
Q 028771 23 VSYGGEHHLPLIMNLVDQELS----EPYSIF-------------TYRYFVYLWPHLSFLAFHKGKCVGTVVCKMGEH--- 82 (204)
Q Consensus 23 ~~~~~~~d~~~i~~l~~~~~~----~~~~~~-------------~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~--- 82 (204)
++.++.+|++.+.++....+. ..++.. .+...+.......++++.+|++||++.+.....
T Consensus 5 iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~~~ivG~~~~~~~~~~~~ 84 (180)
T 1tiq_A 5 MKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQSE 84 (180)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGSSS
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCEEEEEEEEEECCCCCC
T ss_conf 99797876999999999999997055288999999999708999999997699844999997997899999982787655
Q ss_pred -CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCC-CCE
Q ss_conf -887469999998583210499799999999999998098299999763998889999878988826774212488-560
Q 028771 83 -RSTFRGYIAMLVVIKPYRGRGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNG-VDA 160 (204)
Q Consensus 83 -~~~~~~~i~~i~V~p~~Rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~~~-~~~ 160 (204)
.....++|..++|+|+|||+|+|++||+.+++++++.|+..+.|.|...|.+|++||+|+||+.++....+..+. .+.
T Consensus 85 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~g~~~~~~~~~~~~~ 164 (180)
T 1tiq_A 85 EMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSFYMGDEEQTD 164 (180)
T ss_dssp CCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEETTEEEEE
T ss_pred CCCCCCEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCCEECCCEEEEECCCCCCC
T ss_conf 56788589999999877828789999999999999977998799996416988899999869988676888648860555
Q ss_pred EEEECCCCC
Q ss_conf 557615788
Q 028771 161 FRLKLLFPC 169 (204)
Q Consensus 161 ~~m~~~l~~ 169 (204)
++|.+.+..
T Consensus 165 ~~m~~~l~~ 173 (180)
T 1tiq_A 165 LIMAKTLIL 173 (180)
T ss_dssp EEEEEECCC
T ss_pred EEEEEECCC
T ss_conf 799883232
No 5
>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1}
Probab=1.00 E-value=1 Score=132.53 Aligned_cols=147 Identities=16% Similarity=0.152 Sum_probs=123.3
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHH------C---CCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEECCCCCCCEE
Q ss_conf 883895438989768999999855------2---9984098999998618985999998995999999884387887469
Q 028771 18 PEIEYVSYGGEHHLPLIMNLVDQE------L---SEPYSIFTYRYFVYLWPHLSFLAFHKGKCVGTVVCKMGEHRSTFRG 88 (204)
Q Consensus 18 ~~~~~~~~~~~~d~~~i~~l~~~~------~---~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~~ 88 (204)
..+.++. .+.+|++.+.++.... + ..+++...+...+.. +...++++.+|++||++.+..... ...+
T Consensus 23 m~~~iR~-~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~g~ivG~~~~~~~~~--~~~~ 98 (182)
T 3kkw_A 23 MQLSHRP-AETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAE-RRGSTVAVHDGQVLGFANFYQWQH--GDFC 98 (182)
T ss_dssp CCCEEEE-CCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHH-SEEEEEEEETTEEEEEEEEEEEET--TTEE
T ss_pred CCEEEEE-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC-CCCEEEEEECCEEEEEEEEEEECC--CCEE
T ss_conf 5179974-88778999999997289886416566788899999987358-863799986994999999986068--8559
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCCC--CEEEEEC
Q ss_conf 9999985832104997999999999999980-982999997639988899998789888267742124885--6055761
Q 028771 89 YIAMLVVIKPYRGRGIATELVTRSIKVMMES-GCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGV--DAFRLKL 165 (204)
Q Consensus 89 ~i~~i~V~p~~Rg~Gig~~ll~~~~~~~~~~-g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~~~~~--~~~~m~~ 165 (204)
+|..++|+|+|||+|+|++|++.+++++++. +.+.+.+.+...|.+|++||+|+||+.+++...++.+|. +.+.|.|
T Consensus 99 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~g~~~~~~~m~k 178 (182)
T 3kkw_A 99 ALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDK 178 (182)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEEEE
T ss_conf 99989999888089989999999999997457921999999669999999999879908652566466883875799860
Q ss_pred CCC
Q ss_conf 578
Q 028771 166 LFP 168 (204)
Q Consensus 166 ~l~ 168 (204)
.+.
T Consensus 179 ~L~ 181 (182)
T 3kkw_A 179 PLE 181 (182)
T ss_dssp ECC
T ss_pred CCC
T ss_conf 368
No 6
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=1.00 E-value=1 Score=130.73 Aligned_cols=150 Identities=16% Similarity=0.160 Sum_probs=109.4
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCC--------CCCHHHHHHHH-HHH---CCCEE-EEEEECCEEEEEEEEEECCCC
Q ss_conf 888389543898976899999985529--------98409899999-861---89859-999989959999998843878
Q 028771 17 PPEIEYVSYGGEHHLPLIMNLVDQELS--------EPYSIFTYRYF-VYL---WPHLS-FLAFHKGKCVGTVVCKMGEHR 83 (204)
Q Consensus 17 ~~~~~~~~~~~~~d~~~i~~l~~~~~~--------~~~~~~~~~~~-~~~---~~~~~-~v~~~~g~ivG~~~~~~~~~~ 83 (204)
+..+.++. ++++|++.+.+++++.+. .+.+....... ... ..... ++++.+|++||++.+.+....
T Consensus 6 p~~~~IR~-a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dg~ivG~~~~~~~~~~ 84 (173)
T 4h89_A 6 PEALQVRD-AEDADWPAILPFFREIVSAGETYAYDPELTDEQARSLWMTPSGAPQSRTTVAVDADGTVLGSANMYPNRPG 84 (173)
T ss_dssp TTTCEEEE-CCGGGHHHHHHHHHHHHHHCSSCCCCTTCCHHHHHHHHSCCCC-CCCEEEEEECTTCCEEEEEEEEESSSG
T ss_pred CCCEEEEE-CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEEEECCCC
T ss_conf 99649997-99899999999999998716641468998789999999865127873399999959969999999832787
Q ss_pred CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE-EECCCHHHHHHHHHCCCEEEEEEEECCC--CC--C
Q ss_conf 87469999998583210499799999999999998098299999-7639988899998789888267742124--88--5
Q 028771 84 STFRGYIAMLVVIKPYRGRGIATELVTRSIKVMMESGCEEVTLE-AEVTNKGALALYGRLGFIRAKRLFRYYL--NG--V 158 (204)
Q Consensus 84 ~~~~~~i~~i~V~p~~Rg~Gig~~ll~~~~~~~~~~g~~~i~l~-~~~~n~~a~~~y~k~GF~~~~~~~~~~~--~~--~ 158 (204)
......+..++|+|++||+|||++|++++++++++.|+..+.+. +...|.+|++||+|+||+.+++.+..+. ++ .
T Consensus 85 ~~~~~~~~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF~~~G~~~~~~~~~~~~~~ 164 (173)
T 4h89_A 85 PGAHVASASFMVAAAARGRGVGRALCQDMIDWAGREGFRAIQFNAVVETNTVAVKLWQSLGFRVIGTVPEAFHHPTHGYV 164 (173)
T ss_dssp GGTTEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEEEETTTEEE
T ss_pred CCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEECCCCCEE
T ss_conf 77559998669997004355999999999999998799499875322467999999998899899997462598999876
Q ss_pred CEEEEECCC
Q ss_conf 605576157
Q 028771 159 DAFRLKLLF 167 (204)
Q Consensus 159 ~~~~m~~~l 167 (204)
|.++|.|.|
T Consensus 165 D~~~M~k~L 173 (173)
T 4h89_A 165 GLHVMHRPL 173 (173)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEECCC
T ss_conf 889997899
No 7
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=1.00 E-value=1 Score=129.27 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=114.5
Q ss_pred ECCCCCCHHHHHHHHHHHCCCCCHHHHHHH-HHHHCCCEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCC
Q ss_conf 438989768999999855299840989999-9861898599999899599999988438788746999999858321049
Q 028771 24 SYGGEHHLPLIMNLVDQELSEPYSIFTYRY-FVYLWPHLSFLAFHKGKCVGTVVCKMGEHRSTFRGYIAMLVVIKPYRGR 102 (204)
Q Consensus 24 ~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~~~i~~i~V~p~~Rg~ 102 (204)
+..+++|++.+.+++...+........+.. .........+++.++|++||++.+...... ...++|..++|+|++||+
T Consensus 5 r~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~-~~~~~i~~~~v~p~~rg~ 83 (157)
T 1mk4_A 5 RTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSD-PETAYIHFSGVHPDFRKM 83 (157)
T ss_dssp EECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSS-TTEEEEEEEEECTTSCHH
T ss_pred EECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEECCCCC-CCEEEEEEEEECHHHCCC
T ss_conf 9778857999999999853586632689999972667768999979928999999537788-980899877888888279
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEEE---------EEEECCCCCCCEEEEECCC
Q ss_conf 9799999999999998098299999763998889999878988826---------7742124885605576157
Q 028771 103 GIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAK---------RLFRYYLNGVDAFRLKLLF 167 (204)
Q Consensus 103 Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~---------~~~~~~~~~~~~~~m~~~l 167 (204)
|+|+.|+..+++++.+.|+..+.+.+...|.++++||+|+||+.++ ...+++.++.+.++|.|.|
T Consensus 84 Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~g~~~~~~~~~~~~~~~~~~k~l 157 (157)
T 1mk4_A 84 QIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRVLFVKNI 157 (157)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCBEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEECCCCCEECCEEEECCCCCCCCEEEEEEECC
T ss_conf 87999999999999977986899997478889999999869998377416515055427778885269998429
No 8
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp}
Probab=1.00 E-value=1 Score=127.07 Aligned_cols=151 Identities=12% Similarity=0.046 Sum_probs=120.6
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCC-----CHHHHHHHHHHH---CCCEEEEEEECCEEEEEEEEEECCCCCCCEE
Q ss_conf 88838954389897689999998552998-----409899999861---8985999998995999999884387887469
Q 028771 17 PPEIEYVSYGGEHHLPLIMNLVDQELSEP-----YSIFTYRYFVYL---WPHLSFLAFHKGKCVGTVVCKMGEHRSTFRG 88 (204)
Q Consensus 17 ~~~~~~~~~~~~~d~~~i~~l~~~~~~~~-----~~~~~~~~~~~~---~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~~ 88 (204)
...+.++...+.+|++.+.++.......+ +..+.+...+.. ....++++..+|++||++.+...... ...+
T Consensus 17 ~~~~~ir~~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~-~~~~ 95 (177)
T 2r7h_A 17 AGAVAFRRQVLPQDALLVRRVVESTGFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYACYGPTPAT-EGTY 95 (177)
T ss_dssp --CEEEECSCCTTHHHHHHHHHHHTSCSCHHHHHHHHHHHHHHHTC--CCSCEEEEEEETTEEEEEEEEEECTTS-SSEE
T ss_pred CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEEEEECCCC-CCEE
T ss_conf 663688568877779999999986073584004568999999986065788179999989948999998830688-9759
Q ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE--CCCHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECC
Q ss_conf 99999858321049979999999999999809829999976--3998889999878988826774212488560557615
Q 028771 89 YIAMLVVIKPYRGRGIATELVTRSIKVMMESGCEEVTLEAE--VTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLL 166 (204)
Q Consensus 89 ~i~~i~V~p~~Rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~--~~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~~m~~~ 166 (204)
+|..++|+|+|||+|+|+.|+..+++++++.|+..+.+.+. .+|.++++||+|+||+.+++...++.++.+.++|.|.
T Consensus 96 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~~~g~~~~~~~~~ 175 (177)
T 2r7h_A 96 DLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFSAEAVLKAFYRAGDDKIIYRLE 175 (177)
T ss_dssp EEEEEEECTTTTTTTHHHHHHHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEECCCCHHHHHCCCCEEEEEEE
T ss_conf 99999988888378989999999999998669977999914665667999999986997444247677478867999985
Q ss_pred CC
Q ss_conf 78
Q 028771 167 FP 168 (204)
Q Consensus 167 l~ 168 (204)
++
T Consensus 176 l~ 177 (177)
T 2r7h_A 176 VA 177 (177)
T ss_dssp CC
T ss_pred CC
T ss_conf 59
No 9
>2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A*
Probab=1.00 E-value=1 Score=125.37 Aligned_cols=153 Identities=13% Similarity=0.049 Sum_probs=120.8
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCC--CCHHHHHHHHHHHCCCEEEEEEECCEEEEEEEEEECCC------------
Q ss_conf 8883895438989768999999855299--84098999998618985999998995999999884387------------
Q 028771 17 PPEIEYVSYGGEHHLPLIMNLVDQELSE--PYSIFTYRYFVYLWPHLSFLAFHKGKCVGTVVCKMGEH------------ 82 (204)
Q Consensus 17 ~~~~~~~~~~~~~d~~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~------------ 82 (204)
...+.+ +.++.+|++.+.++....+.. .++...+...+...+...++++.+|++||++.+.+...
T Consensus 10 ~~~~~i-R~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~g~ivG~~~~~~~~~~~~~~~~~~~~~ 88 (224)
T 2ree_A 10 NNYYNL-RHPKIEDLRDLIALETLCWSENLQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQV 88 (224)
T ss_dssp -CCEEE-ECCCGGGHHHHHHHHHHHSCTTTCCCHHHHHHHHHHCGGGCEEEEESSCEEEEEEEEEESCGGGGTTCCTTTG
T ss_pred CCCEEE-EECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEEEEEEECCCCHHHCHHHCCCCH
T ss_conf 685399-9799889999999999766671006989999999859983089998997999999964675010112023310
Q ss_pred -----CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEEEC--------------------C---CH
Q ss_conf -----8874699999985832104997999999999999980-98299999763--------------------9---98
Q 028771 83 -----RSTFRGYIAMLVVIKPYRGRGIATELVTRSIKVMMES-GCEEVTLEAEV--------------------T---NK 133 (204)
Q Consensus 83 -----~~~~~~~i~~i~V~p~~Rg~Gig~~ll~~~~~~~~~~-g~~~i~l~~~~--------------------~---n~ 133 (204)
.....++|..++|+|+|||+|||+.||+++++++++. |++.+.+.+.. . |.
T Consensus 89 ~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~~~l~~~~~~~~~~~~~~~y~~~~~~~g~~N~ 168 (224)
T 2ree_A 89 PLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGLLVD 168 (224)
T ss_dssp GGGCCTTCSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECCSSGGGTTTSCHHHHTTCBCTTSCBSS
T ss_pred HHCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 01258999869999989997884777999999999999987269657998536875124789999999888752896448
Q ss_pred HHHHHHHHCCCEEEEEEEECCC-CC---CCEEEEECCCCCC
Q ss_conf 8899998789888267742124-88---5605576157888
Q 028771 134 GALALYGRLGFIRAKRLFRYYL-NG---VDAFRLKLLFPCP 170 (204)
Q Consensus 134 ~a~~~y~k~GF~~~~~~~~~~~-~~---~~~~~m~~~l~~~ 170 (204)
+|++||+++||+.++....|+. ++ .+.++|.+.++.+
T Consensus 169 ~a~~fY~k~GF~~~g~~~~y~~~~~~~~~~~~~m~~~l~~~ 209 (224)
T 2ree_A 169 PLLRFHQIHGAKIEKLLPGYRPKDWENQTCGVLVSYDIQHR 209 (224)
T ss_dssp HHHHHHHHTTCEEEEEETTSCTTCGGGTTCEEEEEECCTTC
T ss_pred CCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 52135330780899971666564424787159999854556
No 10
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=1.00 E-value=1 Score=124.54 Aligned_cols=146 Identities=20% Similarity=0.168 Sum_probs=111.2
Q ss_pred EEECCCCCCHHHHHHHHHHHCCC-------CCHHHHHH----HHHHHCC-----CEEEEEEECCEEEEEEEEEECCC---
Q ss_conf 95438989768999999855299-------84098999----9986189-----85999998995999999884387---
Q 028771 22 YVSYGGEHHLPLIMNLVDQELSE-------PYSIFTYR----YFVYLWP-----HLSFLAFHKGKCVGTVVCKMGEH--- 82 (204)
Q Consensus 22 ~~~~~~~~d~~~i~~l~~~~~~~-------~~~~~~~~----~~~~~~~-----~~~~v~~~~g~ivG~~~~~~~~~--- 82 (204)
.++.++.+|++.+.++....+.. .++..... ..+.... ..++|++.+|++||++.+.+...
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~~~~~~ 82 (199)
T 1u6m_A 3 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 82 (199)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEEECCCHHHH
T ss_conf 13069867799999999999754677775468999999999999818887003456799998996999999743737888
Q ss_pred -------------------------CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
Q ss_conf -------------------------8874699999985832104997999999999999980982999997639988899
Q 028771 83 -------------------------RSTFRGYIAMLVVIKPYRGRGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALA 137 (204)
Q Consensus 83 -------------------------~~~~~~~i~~i~V~p~~Rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~ 137 (204)
.....++|..++|+|++||+|||++||+.+++++++.|+..+.|.|..+|.+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~ 162 (199)
T 1u6m_A 83 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARK 162 (199)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
T ss_conf 88999999997386433210001347998399999999978848889999999999999976997899998668789999
Q ss_pred HHHHCCCEEEEEEEECCCCCCCEEEEECCCCCC
Q ss_conf 998789888267742124885605576157888
Q 028771 138 LYGRLGFIRAKRLFRYYLNGVDAFRLKLLFPCP 170 (204)
Q Consensus 138 ~y~k~GF~~~~~~~~~~~~~~~~~~m~~~l~~~ 170 (204)
||+|+||+.+++... .+.....|.+.+..+
T Consensus 163 fY~k~GF~~~~~~~~---~~~~~~~m~~~~~~~ 192 (199)
T 1u6m_A 163 LYASKGFKDVTTMTI---SGHLYNHMQKEVEGG 192 (199)
T ss_dssp HHHTTTCEEEEEEEE---TTEEEEEEEEEC---
T ss_pred HHHHCCCEECCEEEE---CCCEEEEEEEECCCC
T ss_conf 999879989547971---795378888861577
Done!