Query 028772
Match_columns 204
No_of_seqs 122 out of 1180
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 16:45:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028772.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028772hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02378 glutathione S-transfe 100.0 4E-42 8.6E-47 260.6 18.6 203 1-203 1-203 (213)
2 PLN02817 glutathione dehydroge 100.0 5.8E-38 1.3E-42 243.6 18.5 195 3-198 56-250 (265)
3 TIGR00862 O-ClC intracellular 100.0 2.9E-37 6.2E-42 235.0 20.3 196 3-199 3-220 (236)
4 PRK09481 sspA stringent starva 100.0 4.6E-35 9.9E-40 221.8 17.2 180 16-202 15-205 (211)
5 KOG1422 Intracellular Cl- chan 100.0 4.7E-33 1E-37 201.0 17.9 199 1-199 2-205 (221)
6 KOG0406 Glutathione S-transfer 100.0 2.6E-32 5.6E-37 203.4 18.4 182 18-200 16-212 (231)
7 PLN02473 glutathione S-transfe 100.0 3.2E-32 6.8E-37 206.7 18.3 187 1-201 1-213 (214)
8 PRK15113 glutathione S-transfe 100.0 2E-31 4.2E-36 202.3 18.4 173 19-201 15-210 (214)
9 TIGR01262 maiA maleylacetoacet 100.0 1.2E-31 2.6E-36 202.8 15.9 180 15-200 3-205 (210)
10 PLN02395 glutathione S-transfe 100.0 3.5E-31 7.7E-36 201.0 16.8 187 1-202 1-213 (215)
11 PRK13972 GSH-dependent disulfi 100.0 5.5E-31 1.2E-35 200.0 16.7 171 20-200 9-206 (215)
12 PRK10542 glutathionine S-trans 100.0 2.1E-30 4.6E-35 194.7 14.5 173 20-200 8-198 (201)
13 PTZ00057 glutathione s-transfe 100.0 6.1E-30 1.3E-34 192.9 16.2 173 18-200 11-200 (205)
14 COG0625 Gst Glutathione S-tran 100.0 8.8E-30 1.9E-34 192.9 15.4 169 18-194 7-199 (211)
15 KOG0868 Glutathione S-transfer 100.0 1.4E-29 3.1E-34 178.3 14.0 184 9-198 3-206 (217)
16 PRK10357 putative glutathione 100.0 1.9E-28 4E-33 184.4 16.9 177 16-198 5-199 (202)
17 PRK11752 putative S-transferas 100.0 3.1E-28 6.6E-33 190.0 16.4 176 19-198 51-257 (264)
18 PRK10387 glutaredoxin 2; Provi 100.0 1.7E-27 3.7E-32 180.1 14.5 167 16-194 5-208 (210)
19 KOG0867 Glutathione S-transfer 99.9 2.9E-26 6.2E-31 174.8 17.0 185 1-199 1-209 (226)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 1.8E-26 4E-31 174.4 13.8 167 15-194 3-207 (209)
21 KOG1695 Glutathione S-transfer 99.9 3.8E-24 8.3E-29 158.6 17.7 186 1-200 2-201 (206)
22 cd03061 GST_N_CLIC GST_N famil 99.9 1.8E-24 3.9E-29 140.3 10.5 85 2-87 5-89 (91)
23 KOG4420 Uncharacterized conser 99.9 2.1E-24 4.6E-29 160.6 11.5 187 14-201 29-289 (325)
24 PLN02907 glutamate-tRNA ligase 99.9 6E-21 1.3E-25 165.2 17.8 156 1-192 1-159 (722)
25 PF13417 GST_N_3: Glutathione 99.8 1.8E-19 3.8E-24 114.3 8.8 71 17-87 4-74 (75)
26 KOG4244 Failed axon connection 99.8 4.6E-18 1E-22 127.6 10.8 174 3-189 46-272 (281)
27 cd03059 GST_N_SspA GST_N famil 99.8 6.8E-18 1.5E-22 106.3 9.0 68 17-84 6-73 (73)
28 cd03052 GST_N_GDAP1 GST_N fami 99.7 7E-18 1.5E-22 106.2 8.0 66 16-81 5-73 (73)
29 KOG3029 Glutathione S-transfer 99.7 5.4E-17 1.2E-21 122.6 13.7 165 18-189 97-354 (370)
30 cd03041 GST_N_2GST_N GST_N fam 99.7 1E-17 2.2E-22 106.6 8.2 67 18-84 8-77 (77)
31 PF13409 GST_N_2: Glutathione 99.7 9.7E-18 2.1E-22 104.7 7.9 65 19-83 1-70 (70)
32 cd03060 GST_N_Omega_like GST_N 99.7 7.7E-18 1.7E-22 105.5 7.4 66 15-80 4-70 (71)
33 cd03038 GST_N_etherase_LigE GS 99.7 2.1E-17 4.6E-22 107.0 8.6 80 3-85 1-84 (84)
34 cd03053 GST_N_Phi GST_N family 99.7 2.9E-17 6.3E-22 104.3 8.9 67 17-83 7-76 (76)
35 cd03058 GST_N_Tau GST_N family 99.7 2E-17 4.3E-22 104.5 7.9 69 16-84 5-74 (74)
36 cd03198 GST_C_CLIC GST_C famil 99.7 5.1E-17 1.1E-21 113.1 10.1 105 95-199 4-124 (134)
37 cd03045 GST_N_Delta_Epsilon GS 99.7 4.6E-17 1E-21 102.8 8.4 66 17-82 6-74 (74)
38 cd03055 GST_N_Omega GST_N fami 99.7 4.5E-17 9.7E-22 106.6 8.5 64 18-81 25-89 (89)
39 cd03048 GST_N_Ure2p_like GST_N 99.7 9.7E-17 2.1E-21 103.1 9.2 66 20-85 9-80 (81)
40 COG0435 ECM4 Predicted glutath 99.7 1.8E-17 3.8E-22 125.1 6.3 182 18-201 58-288 (324)
41 cd03076 GST_N_Pi GST_N family, 99.7 4.8E-17 1E-21 102.5 7.2 65 18-82 8-72 (73)
42 cd03044 GST_N_EF1Bgamma GST_N 99.7 6.6E-17 1.4E-21 102.4 7.3 69 14-82 3-74 (75)
43 cd03050 GST_N_Theta GST_N fami 99.7 1.7E-16 3.6E-21 100.8 9.1 68 17-84 6-76 (76)
44 cd03043 GST_N_1 GST_N family, 99.7 1.3E-16 2.8E-21 100.5 8.3 66 16-81 6-73 (73)
45 cd03056 GST_N_4 GST_N family, 99.7 3.2E-16 7E-21 98.6 8.2 66 16-81 5-73 (73)
46 cd03080 GST_N_Metaxin_like GST 99.7 5.8E-16 1.3E-20 98.0 9.1 74 3-85 2-75 (75)
47 cd03039 GST_N_Sigma_like GST_N 99.7 2E-16 4.3E-21 99.4 6.9 65 18-82 7-72 (72)
48 cd03201 GST_C_DHAR GST_C famil 99.7 6E-16 1.3E-20 106.9 9.8 108 92-200 4-111 (121)
49 PF02798 GST_N: Glutathione S- 99.7 6.5E-16 1.4E-20 98.0 8.4 61 22-82 11-76 (76)
50 cd03057 GST_N_Beta GST_N famil 99.7 9E-16 1.9E-20 97.6 8.8 64 22-85 10-77 (77)
51 cd03049 GST_N_3 GST_N family, 99.7 4.9E-16 1.1E-20 97.8 7.3 65 17-81 6-73 (73)
52 cd03046 GST_N_GTT1_like GST_N 99.6 1.2E-15 2.6E-20 96.8 8.8 65 21-85 9-76 (76)
53 cd03051 GST_N_GTT2_like GST_N 99.6 7.8E-16 1.7E-20 97.0 7.5 66 16-81 5-74 (74)
54 cd03047 GST_N_2 GST_N family, 99.6 1.2E-15 2.6E-20 96.1 8.1 65 17-81 6-73 (73)
55 KOG2903 Predicted glutathione 99.6 7E-16 1.5E-20 115.4 7.9 184 18-201 44-290 (319)
56 cd03037 GST_N_GRX2 GST_N famil 99.6 8.4E-16 1.8E-20 96.2 7.1 66 16-82 5-71 (71)
57 cd03040 GST_N_mPGES2 GST_N fam 99.6 1.8E-15 3.8E-20 96.3 7.8 65 18-84 8-76 (77)
58 cd03075 GST_N_Mu GST_N family, 99.6 2.7E-15 5.8E-20 96.5 8.3 67 18-84 7-82 (82)
59 cd03042 GST_N_Zeta GST_N famil 99.6 1.8E-15 3.9E-20 95.1 7.3 66 16-81 5-73 (73)
60 cd03054 GST_N_Metaxin GST_N fa 99.6 6.9E-15 1.5E-19 92.3 8.5 71 4-83 2-72 (72)
61 cd03077 GST_N_Alpha GST_N fami 99.6 1.2E-14 2.5E-19 92.9 8.8 65 18-85 8-77 (79)
62 cd00570 GST_N_family Glutathio 99.5 3.3E-14 7.2E-19 88.1 8.0 64 18-81 7-71 (71)
63 cd03184 GST_C_Omega GST_C fami 99.5 8.8E-14 1.9E-18 96.6 10.2 88 113-200 27-114 (124)
64 COG2999 GrxB Glutaredoxin 2 [P 99.5 5.4E-14 1.2E-18 99.7 8.8 170 14-195 3-209 (215)
65 cd03079 GST_N_Metaxin2 GST_N f 99.5 1E-13 2.2E-18 86.5 7.1 72 5-83 3-74 (74)
66 cd03196 GST_C_5 GST_C family, 99.5 1.9E-13 4.1E-18 93.6 8.1 77 116-197 39-115 (115)
67 KOG3027 Mitochondrial outer me 99.5 4.2E-13 9.2E-18 97.4 10.0 175 4-189 19-247 (257)
68 cd03190 GST_C_ECM4_like GST_C 99.5 1.9E-13 4E-18 97.2 7.7 81 117-199 36-118 (142)
69 cd03203 GST_C_Lambda GST_C fam 99.5 4.7E-13 1E-17 92.4 8.4 79 120-199 32-111 (120)
70 cd03210 GST_C_Pi GST_C family, 99.4 4.2E-13 9E-18 93.4 7.7 78 118-200 35-113 (126)
71 cd03208 GST_C_Alpha GST_C fami 99.4 7.6E-13 1.6E-17 93.4 7.9 73 122-199 43-115 (137)
72 cd03186 GST_C_SspA GST_N famil 99.4 8.5E-13 1.8E-17 89.1 7.7 73 117-196 34-106 (107)
73 PF00043 GST_C: Glutathione S- 99.4 2.3E-12 4.9E-17 85.0 8.3 68 118-191 28-95 (95)
74 cd03188 GST_C_Beta GST_C famil 99.4 9.7E-13 2.1E-17 89.7 6.1 72 118-197 43-114 (114)
75 cd03207 GST_C_8 GST_C family, 99.4 2.4E-12 5.1E-17 86.3 7.7 73 117-198 29-101 (103)
76 cd03209 GST_C_Mu GST_C family, 99.4 1.9E-12 4.1E-17 89.5 7.4 75 119-200 36-110 (121)
77 cd03191 GST_C_Zeta GST_C famil 99.4 2.2E-12 4.8E-17 89.0 7.4 73 120-198 46-118 (121)
78 cd03185 GST_C_Tau GST_C family 99.4 2.3E-12 5E-17 89.5 7.6 81 117-200 34-116 (126)
79 PF13410 GST_C_2: Glutathione 99.4 2.5E-12 5.4E-17 79.8 6.1 65 117-186 5-69 (69)
80 cd03187 GST_C_Phi GST_C family 99.3 2.1E-12 4.5E-17 88.6 6.0 73 119-197 46-118 (118)
81 cd03204 GST_C_GDAP1 GST_C fami 99.3 6E-12 1.3E-16 85.1 7.6 76 117-193 28-111 (111)
82 PF14497 GST_C_3: Glutathione 99.3 5.9E-12 1.3E-16 83.9 6.8 66 117-189 34-99 (99)
83 cd03183 GST_C_Theta GST_C fami 99.3 1E-11 2.2E-16 86.4 8.2 76 119-200 46-123 (126)
84 cd03177 GST_C_Delta_Epsilon GS 99.3 1E-11 2.2E-16 85.4 8.1 78 114-198 34-111 (118)
85 cd03178 GST_C_Ure2p_like GST_C 99.3 3.4E-12 7.4E-17 86.9 5.3 73 118-197 40-112 (113)
86 cd03195 GST_C_4 GST_C family, 99.3 1.5E-11 3.2E-16 84.1 8.4 73 117-199 41-113 (114)
87 cd03194 GST_C_3 GST_C family, 99.3 2.3E-11 5E-16 83.1 8.7 74 116-198 39-113 (114)
88 cd03182 GST_C_GTT2_like GST_C 99.3 2E-11 4.3E-16 83.6 7.4 69 118-193 49-117 (117)
89 cd03181 GST_C_EFB1gamma GST_C 99.3 9.8E-12 2.1E-16 85.9 5.9 80 118-202 40-119 (123)
90 cd03180 GST_C_2 GST_C family, 99.3 1.9E-11 4.2E-16 82.6 7.0 67 119-193 44-110 (110)
91 cd03200 GST_C_JTV1 GST_C famil 99.3 6.9E-11 1.5E-15 78.2 9.3 94 77-190 1-96 (96)
92 cd03206 GST_C_7 GST_C family, 99.2 2.2E-11 4.8E-16 81.2 6.5 69 117-193 32-100 (100)
93 TIGR02190 GlrX-dom Glutaredoxi 99.2 6E-11 1.3E-15 75.7 7.5 72 1-81 8-79 (79)
94 cd03078 GST_N_Metaxin1_like GS 99.2 1.3E-10 2.7E-15 72.9 8.7 71 4-83 2-72 (73)
95 cd03189 GST_C_GTT1_like GST_C 99.2 6.1E-11 1.3E-15 81.5 6.8 64 120-191 56-119 (119)
96 cd03202 GST_C_etherase_LigE GS 99.2 1.2E-10 2.5E-15 80.8 7.5 69 116-190 56-124 (124)
97 cd03193 GST_C_Metaxin GST_C fa 99.1 2.2E-10 4.9E-15 74.5 4.8 69 118-188 19-88 (88)
98 PRK10638 glutaredoxin 3; Provi 99.1 1.2E-09 2.6E-14 70.3 7.7 70 3-81 4-74 (83)
99 cd00299 GST_C_family Glutathio 99.0 1E-09 2.2E-14 72.6 6.5 66 117-187 35-100 (100)
100 cd03029 GRX_hybridPRX5 Glutare 99.0 2.7E-09 6E-14 66.7 7.8 70 3-81 3-72 (72)
101 cd03192 GST_C_Sigma_like GST_C 99.0 1.5E-09 3.2E-14 72.8 6.1 66 118-187 39-104 (104)
102 cd03211 GST_C_Metaxin2 GST_C f 99.0 9.6E-10 2.1E-14 76.4 4.8 74 113-188 52-126 (126)
103 PF14834 GST_C_4: Glutathione 98.9 4.5E-09 9.8E-14 69.9 7.3 94 97-200 10-115 (117)
104 KOG3028 Translocase of outer m 98.9 6.5E-08 1.4E-12 75.1 14.4 174 3-189 2-233 (313)
105 cd03179 GST_C_1 GST_C family, 98.9 2.2E-09 4.7E-14 71.9 5.6 63 118-188 43-105 (105)
106 PRK10329 glutaredoxin-like pro 98.9 5.6E-09 1.2E-13 66.7 6.6 62 1-71 1-62 (81)
107 cd03197 GST_C_mPGES2 GST_C fam 98.8 1.7E-08 3.6E-13 71.3 6.8 67 117-189 78-145 (149)
108 cd03212 GST_C_Metaxin1_3 GST_C 98.8 7.3E-09 1.6E-13 73.0 4.3 72 116-189 62-134 (137)
109 cd03027 GRX_DEP Glutaredoxin ( 98.8 4.4E-08 9.6E-13 61.3 7.2 61 18-78 9-70 (73)
110 COG0695 GrxC Glutaredoxin and 98.7 1.4E-07 3E-12 60.1 7.8 70 1-79 1-73 (80)
111 cd03205 GST_C_6 GST_C family, 98.7 8.2E-08 1.8E-12 63.6 6.7 63 117-187 36-98 (98)
112 cd02066 GRX_family Glutaredoxi 98.7 1.7E-07 3.7E-12 57.9 7.2 62 18-79 8-70 (72)
113 PRK11200 grxA glutaredoxin 1; 98.6 3.8E-07 8.2E-12 58.8 8.1 76 1-85 1-84 (85)
114 cd03418 GRX_GRXb_1_3_like Glut 98.6 3.7E-07 8E-12 57.3 7.1 63 18-80 8-72 (75)
115 TIGR02196 GlrX_YruB Glutaredox 98.5 4.4E-07 9.5E-12 56.4 7.0 63 18-80 8-73 (74)
116 PF10568 Tom37: Outer mitochon 98.5 1.4E-06 3.1E-11 54.1 7.9 60 14-80 8-71 (72)
117 cd02976 NrdH NrdH-redoxin (Nrd 98.5 6.4E-07 1.4E-11 55.5 6.3 56 18-73 8-64 (73)
118 TIGR02181 GRX_bact Glutaredoxi 98.5 9.7E-07 2.1E-11 56.0 7.1 65 18-82 7-72 (79)
119 TIGR02194 GlrX_NrdH Glutaredox 98.4 1.1E-06 2.5E-11 54.7 5.4 52 17-68 6-57 (72)
120 TIGR02183 GRXA Glutaredoxin, G 98.3 5.1E-06 1.1E-10 53.6 7.8 68 18-85 8-83 (86)
121 TIGR02189 GlrX-like_plant Glut 98.3 8.3E-06 1.8E-10 54.1 8.8 62 18-79 16-81 (99)
122 PF00462 Glutaredoxin: Glutare 98.3 1.8E-06 3.9E-11 51.8 4.4 53 18-70 7-60 (60)
123 TIGR02200 GlrX_actino Glutared 98.2 6.8E-06 1.5E-10 51.5 6.8 63 18-80 8-75 (77)
124 cd03419 GRX_GRXh_1_2_like Glut 98.2 1.8E-05 3.9E-10 50.3 8.6 65 18-82 8-76 (82)
125 PHA03050 glutaredoxin; Provisi 98.2 1.4E-05 3.1E-10 53.8 8.4 61 18-78 21-88 (108)
126 TIGR00365 monothiol glutaredox 98.2 1.9E-05 4.2E-10 52.2 8.1 65 16-80 23-88 (97)
127 TIGR02180 GRX_euk Glutaredoxin 98.1 4.1E-05 8.8E-10 48.8 8.5 65 18-82 7-77 (84)
128 cd03028 GRX_PICOT_like Glutare 98.1 3.8E-05 8.1E-10 50.0 8.1 64 17-80 20-84 (90)
129 cd03199 GST_C_GRX2 GST_C famil 97.8 0.00023 5E-09 49.1 8.0 69 115-193 57-125 (128)
130 PRK10824 glutaredoxin-4; Provi 97.7 0.00026 5.5E-09 48.1 7.9 64 17-80 27-91 (115)
131 cd03031 GRX_GRX_like Glutaredo 97.5 0.00044 9.4E-09 49.1 7.0 74 3-79 2-80 (147)
132 PRK12759 bifunctional gluaredo 97.5 0.00042 9.1E-09 57.7 7.9 68 2-78 3-79 (410)
133 PF04399 Glutaredoxin2_C: Glut 97.4 0.00039 8.6E-09 48.3 5.1 68 117-194 58-125 (132)
134 KOG1752 Glutaredoxin and relat 97.4 0.0025 5.4E-08 42.5 8.6 62 18-79 22-87 (104)
135 PTZ00062 glutaredoxin; Provisi 97.2 0.0025 5.5E-08 47.8 7.9 64 16-79 124-188 (204)
136 KOG1147 Glutamyl-tRNA syntheta 96.9 0.00077 1.7E-08 56.6 2.7 117 66-197 44-162 (712)
137 PRK01655 spxA transcriptional 96.4 0.0074 1.6E-07 42.1 4.9 34 3-45 2-35 (131)
138 COG0278 Glutaredoxin-related p 96.4 0.03 6.5E-07 36.6 7.0 75 3-81 17-93 (105)
139 cd02973 TRX_GRX_like Thioredox 96.2 0.027 5.8E-07 34.0 5.9 51 18-71 9-64 (67)
140 cd03032 ArsC_Spx Arsenate Redu 95.9 0.019 4.2E-07 39.0 4.9 33 3-44 2-34 (115)
141 cd03036 ArsC_like Arsenate Red 95.9 0.017 3.6E-07 39.0 4.5 30 17-46 6-35 (111)
142 cd03030 GRX_SH3BGR Glutaredoxi 95.8 0.042 9.2E-07 35.8 5.9 57 22-78 18-79 (92)
143 PRK12559 transcriptional regul 95.8 0.027 5.9E-07 39.2 5.2 35 3-46 2-36 (131)
144 cd02977 ArsC_family Arsenate R 95.7 0.027 5.9E-07 37.5 4.9 28 17-44 6-33 (105)
145 PRK13344 spxA transcriptional 95.7 0.03 6.5E-07 39.1 5.2 29 18-46 8-36 (132)
146 PF05768 DUF836: Glutaredoxin- 95.4 0.13 2.8E-06 32.5 6.9 55 2-67 1-57 (81)
147 PF11287 DUF3088: Protein of u 95.1 0.14 3.1E-06 34.2 6.6 70 18-87 22-110 (112)
148 TIGR01617 arsC_related transcr 94.6 0.057 1.2E-06 36.8 3.8 28 17-44 6-33 (117)
149 TIGR00412 redox_disulf_2 small 94.3 0.35 7.5E-06 30.1 6.7 50 18-71 8-61 (76)
150 PF13192 Thioredoxin_3: Thiore 93.7 0.29 6.4E-06 30.4 5.5 51 18-72 8-62 (76)
151 PF04908 SH3BGR: SH3-binding, 93.5 0.48 1E-05 31.3 6.5 75 1-78 1-85 (99)
152 COG1393 ArsC Arsenate reductas 93.5 0.27 5.8E-06 33.6 5.4 37 1-46 1-37 (117)
153 cd03035 ArsC_Yffb Arsenate Red 93.3 0.22 4.8E-06 33.2 4.7 31 16-46 5-35 (105)
154 cd03033 ArsC_15kD Arsenate Red 92.9 0.29 6.3E-06 33.2 4.9 31 16-46 6-36 (113)
155 PRK10026 arsenate reductase; P 91.5 0.63 1.4E-05 32.9 5.3 36 2-46 3-38 (141)
156 cd01659 TRX_superfamily Thiore 91.3 0.61 1.3E-05 26.4 4.5 49 18-66 7-60 (69)
157 PF11801 Tom37_C: Tom37 C-term 91.1 0.5 1.1E-05 34.4 4.7 39 124-162 114-154 (168)
158 TIGR00411 redox_disulf_1 small 90.4 1.8 3.9E-05 26.7 6.4 50 18-68 9-62 (82)
159 TIGR01616 nitro_assoc nitrogen 89.7 1.1 2.3E-05 31.0 5.1 31 16-46 7-37 (126)
160 PRK10853 putative reductase; P 89.1 1.1 2.4E-05 30.6 4.8 29 16-44 6-34 (118)
161 KOG0911 Glutaredoxin-related p 88.4 2.4 5.2E-05 32.2 6.5 75 3-81 141-216 (227)
162 cd03026 AhpF_NTD_C TRX-GRX-lik 88.0 2.6 5.7E-05 27.1 5.8 53 18-71 22-77 (89)
163 COG4545 Glutaredoxin-related p 87.7 2.4 5.2E-05 26.3 5.0 54 18-71 10-77 (85)
164 PHA02125 thioredoxin-like prot 87.2 3.2 6.9E-05 25.5 5.7 45 18-65 8-52 (75)
165 KOG3425 Uncharacterized conser 86.5 3.3 7.2E-05 28.2 5.7 80 3-82 28-121 (128)
166 PF09635 MetRS-N: MetRS-N bind 83.6 2 4.3E-05 29.4 3.6 30 57-86 33-64 (122)
167 TIGR00014 arsC arsenate reduct 82.2 3.8 8.1E-05 27.7 4.7 31 16-46 5-35 (114)
168 KOG1668 Elongation factor 1 be 80.4 1.4 3E-05 33.5 2.2 59 124-194 10-68 (231)
169 cd03034 ArsC_ArsC Arsenate Red 79.6 5.3 0.00011 26.8 4.7 29 16-44 5-33 (112)
170 TIGR03140 AhpF alkyl hydropero 72.0 4.7 0.0001 34.8 3.5 65 18-83 127-198 (515)
171 PF03960 ArsC: ArsC family; I 71.3 3.6 7.8E-05 27.5 2.2 28 16-43 2-29 (110)
172 PRK15317 alkyl hydroperoxide r 69.8 6 0.00013 34.2 3.7 65 18-83 126-197 (517)
173 PF06110 DUF953: Eukaryotic pr 69.6 13 0.00028 25.4 4.5 70 5-76 24-108 (119)
174 PF04134 DUF393: Protein of un 56.1 54 0.0012 21.6 5.8 64 18-82 5-76 (114)
175 TIGR01295 PedC_BrcD bacterioci 55.5 63 0.0014 21.9 6.8 27 17-43 32-62 (122)
176 TIGR03143 AhpF_homolog putativ 54.7 39 0.00085 29.6 6.0 51 18-71 486-541 (555)
177 PRK09266 hypothetical protein; 52.3 21 0.00046 27.8 3.7 57 29-85 200-259 (266)
178 KOG2824 Glutaredoxin-related p 48.0 34 0.00075 27.0 4.1 57 23-79 150-211 (281)
179 cd02975 PfPDO_like_N Pyrococcu 44.1 50 0.0011 21.9 4.1 47 18-65 32-81 (113)
180 COG3011 Predicted thiol-disulf 40.5 1.2E+02 0.0026 21.3 5.4 75 9-83 5-86 (137)
181 PHA03075 glutaredoxin-like pro 40.3 50 0.0011 22.5 3.4 67 2-84 4-70 (123)
182 PHA03158 hypothetical protein; 34.4 2E+02 0.0043 21.5 6.4 66 66-135 206-271 (273)
183 COG5515 Uncharacterized conser 34.0 49 0.0011 19.6 2.3 15 18-32 13-27 (70)
184 cd05295 MDH_like Malate dehydr 32.5 1.1E+02 0.0024 26.2 5.1 73 18-90 2-91 (452)
185 TIGR02681 phage_pRha phage reg 32.4 47 0.001 22.2 2.4 25 61-85 3-28 (108)
186 cd00449 PLPDE_IV PyridoxaL 5'- 32.3 46 0.001 25.6 2.8 55 29-83 196-255 (256)
187 PRK06092 4-amino-4-deoxychoris 32.0 61 0.0013 25.2 3.4 55 29-84 208-265 (268)
188 TIGR02187 GlrX_arch Glutaredox 31.6 1.5E+02 0.0032 22.3 5.3 48 18-66 143-193 (215)
189 COG2761 FrnE Predicted dithiol 29.4 42 0.0009 25.8 1.9 26 1-33 4-29 (225)
190 cd01557 BCAT_beta_family BCAT_ 28.7 38 0.00083 26.7 1.7 56 29-84 211-273 (279)
191 PF00731 AIRC: AIR carboxylase 28.2 74 0.0016 22.7 2.9 31 19-49 12-42 (150)
192 TIGR01764 excise DNA binding d 27.4 1.1E+02 0.0023 16.2 3.3 25 57-81 24-48 (49)
193 cd02953 DsbDgamma DsbD gamma f 27.2 1.7E+02 0.0037 18.6 5.7 46 18-64 21-77 (104)
194 PRK06606 branched-chain amino 25.0 67 0.0014 25.7 2.5 54 29-82 228-286 (306)
195 PRK11657 dsbG disulfide isomer 25.0 99 0.0021 24.0 3.4 14 18-31 127-140 (251)
196 TIGR01162 purE phosphoribosyla 24.8 1.3E+02 0.0028 21.7 3.6 29 19-47 10-38 (156)
197 cd04911 ACT_AKiii-YclM-BS_1 AC 24.4 1E+02 0.0022 19.2 2.7 24 20-43 15-38 (76)
198 KOG4023 Uncharacterized conser 24.2 87 0.0019 20.7 2.4 43 1-46 2-44 (108)
199 PF10022 DUF2264: Uncharacteri 24.2 3E+02 0.0064 22.9 6.1 96 61-158 99-210 (361)
200 cd03020 DsbA_DsbC_DsbG DsbA fa 23.7 1.1E+02 0.0023 22.6 3.3 15 18-32 87-101 (197)
201 PRK07650 4-amino-4-deoxychoris 23.5 88 0.0019 24.6 3.0 54 29-82 212-269 (283)
202 PRK13356 aminotransferase; Pro 23.1 75 0.0016 25.1 2.5 54 29-83 221-277 (286)
203 TIGR01122 ilvE_I branched-chai 22.2 86 0.0019 24.9 2.7 54 29-82 220-278 (298)
204 PF12123 Amidase02_C: N-acetyl 22.0 96 0.0021 17.2 2.0 29 55-83 11-39 (45)
205 PF02184 HAT: HAT (Half-A-TPR) 21.9 87 0.0019 16.0 1.7 16 188-203 15-30 (32)
206 PF13344 Hydrolase_6: Haloacid 21.8 1.7E+02 0.0037 19.0 3.6 65 21-87 17-81 (101)
207 cd02984 TRX_PICOT TRX domain, 21.7 2.1E+02 0.0046 17.7 4.3 50 18-68 24-79 (97)
208 PRK07544 branched-chain amino 21.1 86 0.0019 24.8 2.4 53 29-82 225-280 (292)
209 PF12728 HTH_17: Helix-turn-he 20.5 1.7E+02 0.0036 16.0 3.5 27 57-83 24-50 (51)
210 PRK15371 effector protein YopJ 20.4 2.2E+02 0.0047 22.8 4.4 42 118-162 23-64 (287)
211 PRK10877 protein disulfide iso 20.4 1.4E+02 0.003 22.9 3.4 16 18-33 117-132 (232)
212 cd02952 TRP14_like Human TRX-r 20.3 2.9E+02 0.0063 18.7 8.1 62 3-65 24-96 (119)
No 1
>PLN02378 glutathione S-transferase DHAR1
Probab=100.00 E-value=4e-42 Score=260.61 Aligned_cols=203 Identities=70% Similarity=1.130 Sum_probs=173.0
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
|.+|||+|+|-++..+++.||||+||+++|+++|++|+.+.+++.+++++|++.||.|+||+|+++|.+|+||.+|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL 80 (213)
T PLN02378 1 MALEICVKAAVGAPDHLGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGIL 80 (213)
T ss_pred CceehhhhccCCCCCCCCCCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred HHhCCCCCCCCChHHhhhhcchHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHH
Q 028772 81 EEKYPEPSLTNPPEFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYH 160 (204)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~ 160 (204)
+++++...+.++.+++++...++..+..++......+...+.+.+.|..+|++|+.++++|++||++|+||+++++++.+
T Consensus 81 ~~~~~~~~l~~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~ 160 (213)
T PLN02378 81 EEKYPDPPLKTPAEFASVGSNIFGTFGTFLKSKDSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYH 160 (213)
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHH
Confidence 99998766666667777777777666555544333445567788899999999986557999999999999999999988
Q ss_pred HHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhhhcc
Q 028772 161 LQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYAVFE 203 (204)
Q Consensus 161 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~~~~ 203 (204)
+.........+++.+++|+|++|++++.++|++++++.....+
T Consensus 161 l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~ 203 (213)
T PLN02378 161 LQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYV 203 (213)
T ss_pred HHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCChHHH
Confidence 7644333334444478999999999999999999998776554
No 2
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=100.00 E-value=5.8e-38 Score=243.63 Aligned_cols=195 Identities=59% Similarity=1.078 Sum_probs=168.2
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
+++++|++......++.||||+|++++|+++||+|+.+.++..+++++|+++||.|++|+|+++|.+++||.+|++||++
T Consensus 56 ~~~~~~~~~~~~~~~g~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e 135 (265)
T PLN02817 56 LEVCVKASLTVPNKLGDCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEE 135 (265)
T ss_pred HHHHHhcccCCCCcCCCCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHH
Confidence 46788888888888999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred hCCCCCCCCChHHhhhhcchHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHH
Q 028772 83 KYPEPSLTNPPEFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQ 162 (204)
Q Consensus 83 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~ 162 (204)
++|.+.+.++.+++++..+++..+..++......+...+.+.+.+..||++|++ +++||+|+++|+||+++++.+.++.
T Consensus 136 ~~p~~~L~~~~era~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~-~g~yl~Gd~~SlADi~l~p~L~~l~ 214 (265)
T PLN02817 136 KYPDPPLATPPEKASVGSKIFSTFIGFLKSKDPGDGTEQALLDELTSFDDYIKE-NGPFINGEKISAADLSLGPKLYHLE 214 (265)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHhc-CCCeeCCCCCCHHHHHHHHHHHHHH
Confidence 999877777778888888888776666554443344456788889999999986 3599999999999999999998876
Q ss_pred HHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHh
Q 028772 163 VALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLS 198 (204)
Q Consensus 163 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~ 198 (204)
.....+.++++.+.+|+|.+|++++.++|+|++++.
T Consensus 215 ~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~ 250 (265)
T PLN02817 215 IALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRA 250 (265)
T ss_pred HHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCC
Confidence 544434455556889999999999999999999876
No 3
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=100.00 E-value=2.9e-37 Score=235.05 Aligned_cols=196 Identities=28% Similarity=0.509 Sum_probs=159.4
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
++||+|++ .+...++.||+|+|++++|.++||+|+.+.+++.+++++|+++||.|++|+|+++|.+++||.+|++||++
T Consensus 3 ~el~~ka~-~~~~~~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e 81 (236)
T TIGR00862 3 IELFVKAG-SDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEE 81 (236)
T ss_pred eEEEEecC-CCCCcCCCCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHH
Confidence 79999997 56688999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hCCCC---CCCCCh-HHhhhhcchHHHHHHhhcCCCC--CchHHHHHHHHHHHHHHHHhhc----------------CCC
Q 028772 83 KYPEP---SLTNPP-EFASLGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHLKTH----------------GGP 140 (204)
Q Consensus 83 ~~~~~---~l~~~~-~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~l~~le~~L~~~----------------~~~ 140 (204)
.++.+ .+.|.+ ........++..+..++.+... .+...+.+.+.+..||++|.+. +++
T Consensus 82 ~~~~~~~p~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~ 161 (236)
T TIGR00862 82 TLCPPRYPKLSPKHPESNTAGLDIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRK 161 (236)
T ss_pred HcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCC
Confidence 99752 233322 1112222355555554433221 1233456889999999999741 469
Q ss_pred cccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhh
Q 028772 141 FIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSY 199 (204)
Q Consensus 141 yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~ 199 (204)
||.|+++|+|||+++|++.++..+...+.++++.+++|+|.+|++++.++|+|++++..
T Consensus 162 f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~ 220 (236)
T TIGR00862 162 FLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPD 220 (236)
T ss_pred cccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCC
Confidence 99999999999999999999987655666777779999999999999999999998643
No 4
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=4.6e-35 Score=221.78 Aligned_cols=180 Identities=21% Similarity=0.291 Sum_probs=143.4
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCCCCCCCCCh--
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSLTNPP-- 93 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~~~~l~~~~-- 93 (204)
....||+|++++++|+++|++|+.+.++..+++++|+++||.|+||+|+++|.+|+||.||++||+++||...+.|.+
T Consensus 15 ~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l~p~~~~ 94 (211)
T PRK09481 15 SGPTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPV 94 (211)
T ss_pred CCCCChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCCCCCCCHH
Confidence 335799999999999999999999999988788899999999999999999999999999999999999987777744
Q ss_pred HHhhhhcchHH---HHHHh---hcCC--CCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHH
Q 028772 94 EFASLGSKIFP---SFVNF---LKSK--DPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVAL 165 (204)
Q Consensus 94 ~~~~~~~~l~~---~~~~~---~~~~--~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~ 165 (204)
+++++..|+.. .+..+ +... ...+...+.+.+.+..+|++|+++ +||+|+++|+||+++++.+.++...
T Consensus 95 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~~l~G~~~t~AD~~l~~~~~~~~~~- 171 (211)
T PRK09481 95 ARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFGEK--PYFMSEEFSLVDCYLAPLLWRLPVL- 171 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccC--CcccCCCccHHHHHHHHHHHHHHhc-
Confidence 45555555431 11111 1111 112344567888899999999864 9999999999999999999776532
Q ss_pred hcccCCCCC-ccchHHHHHHHHhhcCcchHhhHhhhhc
Q 028772 166 EHFKQWTVP-ESLAHVHGYTKDGCRRSMHELVLSYAVF 202 (204)
Q Consensus 166 ~~~~~~~~~-~~~p~l~~~~~~~~~~p~~~~~l~~~~~ 202 (204)
+.++. +.+|+|++|++++.+||++++++.+..-
T Consensus 172 ----~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~~~ 205 (211)
T PRK09481 172 ----GIELSGPGAKELKGYMTRVFERDSFLASLTEAER 205 (211)
T ss_pred ----CCCCCCCCChhHHHHHHHHhccHHHHHHcCHHHH
Confidence 22232 5789999999999999999999887643
No 5
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-33 Score=200.99 Aligned_cols=199 Identities=49% Similarity=0.844 Sum_probs=183.5
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
|.++|++|++.+.....|.|||||++.+.|+++|++|++..||+..+++||.+++|.|++|+|..++...+||..|-++|
T Consensus 2 p~iel~vkA~s~~~~~~Gdcpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~L 81 (221)
T KOG1422|consen 2 PEIELCVKAGSDGPDSLGDCPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFL 81 (221)
T ss_pred CceEEEEEeccCCcccCCCChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCC--ChHHhhhhcchHHHHHHhhcCCC--CCchHHHHHHHHHHHHHHHHhh-cCCCcccCCCCChhHHHHH
Q 028772 81 EEKYPEPSLTN--PPEFASLGSKIFPSFVNFLKSKD--PNDGTEQALLEELKALDEHLKT-HGGPFIAGEKVTAVDLSLA 155 (204)
Q Consensus 81 ~~~~~~~~l~~--~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~l~~le~~L~~-~~~~yl~G~~~T~aD~~~~ 155 (204)
.+.+|.+.+.. +.+.+.+..+++..+..++.... ..+.....+.+.|..|+++|+. +.++||.||++|.|||.+.
T Consensus 82 ee~l~~p~~~~~~~~E~asag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLl 161 (221)
T KOG1422|consen 82 EEKLPPPKLPTLAPPESASAGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLL 161 (221)
T ss_pred HHhcCCCCCcccCCHHHHhhHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhc
Confidence 99999876544 67888999999999999965433 3456678888999999999998 6789999999999999999
Q ss_pred hHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhh
Q 028772 156 PKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSY 199 (204)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~ 199 (204)
|-|+.++.+.+++.+++++++++++.+|+..+.++.+|.+++..
T Consensus 162 PKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~ 205 (221)
T KOG1422|consen 162 PKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPA 205 (221)
T ss_pred hhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCch
Confidence 99999999999999999999999999999999999999887654
No 6
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-32 Score=203.35 Aligned_cols=182 Identities=24% Similarity=0.431 Sum_probs=149.5
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhC-CCCCccEEEeCCeeeechHHHHHHHHHhCC-CCCCCCChHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEIS-PEGKVPVVKFDDKWVADSDVIVRIIEEKYP-EPSLTNPPEF 95 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~-p~g~vP~L~~~~~~l~es~aI~~yL~~~~~-~~~l~~~~~~ 95 (204)
.+|||++|++++|.++||+|+.+.+|..++++++++.| +.++||||+++|..++||..|++||++.++ .++++|.+..
T Consensus 16 w~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy 95 (231)
T KOG0406|consen 16 WFSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPY 95 (231)
T ss_pred ecChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHH
Confidence 69999999999999999999999999999999999999 589999999999999999999999999999 5899997754
Q ss_pred hhhhcchHHH---------HHHhhc-C-CCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHH
Q 028772 96 ASLGSKIFPS---------FVNFLK-S-KDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVA 164 (204)
Q Consensus 96 ~~~~~~l~~~---------~~~~~~-~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~ 164 (204)
.+..+.+... ...+.. . .+..+.+.+.+.+.|..+|+.|.. +++|+.|+++++.|++++|++.++...
T Consensus 96 ~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k-~k~~fgG~~~G~vDi~~~p~~~~~~~~ 174 (231)
T KOG0406|consen 96 ERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGK-GKDFFGGETIGFVDIAIGPSFERWLAV 174 (231)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCcCHhhhhHHhhHHHHHHH
Confidence 4433333221 112222 2 234456678899999999999993 569999999999999999999887765
Q ss_pred HhcccC--CCCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 165 LEHFKQ--WTVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 165 ~~~~~~--~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
.....+ .....++|.|.+|.+++.++|++++++.+.
T Consensus 175 ~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~ 212 (231)
T KOG0406|consen 175 LEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDS 212 (231)
T ss_pred HHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCH
Confidence 544432 223488999999999999999999988764
No 7
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=3.2e-32 Score=206.66 Aligned_cols=187 Identities=19% Similarity=0.263 Sum_probs=142.7
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIV 77 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~ 77 (204)
|+++||.. ..||+|+||+++|+++||+|+.+.++..+ .+++++++||.|+||+|+++|.+|+||.||+
T Consensus 1 ~~~kLy~~---------~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~ 71 (214)
T PLN02473 1 MVVKVYGQ---------IKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIA 71 (214)
T ss_pred CceEEecC---------CCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHH
Confidence 77788865 68999999999999999999999998764 5678999999999999999999999999999
Q ss_pred HHHHHhCCCC--CCCCCh--HHhhhhcchHH---HH---------HHhhcC--CCC-C----chHHHHHHHHHHHHHHHH
Q 028772 78 RIIEEKYPEP--SLTNPP--EFASLGSKIFP---SF---------VNFLKS--KDP-N----DGTEQALLEELKALDEHL 134 (204)
Q Consensus 78 ~yL~~~~~~~--~l~~~~--~~~~~~~~l~~---~~---------~~~~~~--~~~-~----~~~~~~~~~~l~~le~~L 134 (204)
+||+++++.. ++.|.+ +++++..|+.. .+ ...+.. ... . +.....+.+.++.+|++|
T Consensus 72 ~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 151 (214)
T PLN02473 72 RYYATKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRL 151 (214)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999753 466643 45555544321 01 011111 111 1 223456777899999999
Q ss_pred hhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhhh
Q 028772 135 KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYAV 201 (204)
Q Consensus 135 ~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~~ 201 (204)
+++ +|++||++|+||+++++.+.++..... . ....+.+|+|.+|++++.++|++++++...-
T Consensus 152 ~~~--~~l~Gd~~t~ADi~~~~~~~~~~~~~~-~--~~~~~~~P~l~~w~~~~~~~p~~~~~~~~~~ 213 (214)
T PLN02473 152 ATN--RYLGGDEFTLADLTHMPGMRYIMNETS-L--SGLVTSRENLNRWWNEISARPAWKKLMELAA 213 (214)
T ss_pred ccC--CcccCCCCCHHHHHHHHHHHHHHhccc-c--HHHHhcCHHHHHHHHHHhcChhhHHHHHHhc
Confidence 865 999999999999999998876542111 1 1123789999999999999999999988653
No 8
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=2e-31 Score=202.31 Aligned_cols=173 Identities=18% Similarity=0.246 Sum_probs=136.6
Q ss_pred CCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCCCCC---CCCC
Q 028772 19 DCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPS---LTNP 92 (204)
Q Consensus 19 ~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~~~~---l~~~ 92 (204)
.||+|+|++++|+++||+|+.+.++..+ ..++|++.||.|+||+|+++|.+|+||.||++||+++++..+ ++|.
T Consensus 15 ~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~ 94 (214)
T PRK15113 15 FSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPA 94 (214)
T ss_pred CCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCC
Confidence 6999999999999999999999999865 457899999999999999999999999999999999998765 7774
Q ss_pred h--HHhhhhcchHHH---HHHh---------hcC---CCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHH
Q 028772 93 P--EFASLGSKIFPS---FVNF---------LKS---KDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLA 155 (204)
Q Consensus 93 ~--~~~~~~~~l~~~---~~~~---------~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~ 155 (204)
+ +++++..|+... +... +.. ....+...+.+.+.+..+|++|+. +++|++|+ +|+||++++
T Consensus 95 ~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~l~G~-~TlADi~l~ 172 (214)
T PRK15113 95 DLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAP-GQPNLFGE-WCIADTDLA 172 (214)
T ss_pred CHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhc-CCCEeeCC-ccHHHHHHH
Confidence 4 566665554321 1111 111 112244567788999999999985 34799996 999999999
Q ss_pred hHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhhh
Q 028772 156 PKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYAV 201 (204)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~~ 201 (204)
+.+.++... +.++ .|+|.+|++++.+||+|+++++...
T Consensus 173 ~~l~~~~~~-----~~~~---~p~l~~~~~r~~~rp~~~~~~~~~~ 210 (214)
T PRK15113 173 LMLNRLVLH-----GDEV---PERLADYATFQWQRASVQRWLALSA 210 (214)
T ss_pred HHHHHHHHc-----CCCC---CHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 999876431 2222 2999999999999999999998653
No 9
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.98 E-value=1.2e-31 Score=202.83 Aligned_cols=180 Identities=21% Similarity=0.318 Sum_probs=139.7
Q ss_pred CCCCCCchHHHHHHHHHhcCCCceEEeecCCC----CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCCCCCCC
Q 028772 15 DILGDCPFSQRALLTLEEKKVPYKRHLINISD----KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSLT 90 (204)
Q Consensus 15 ~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~----~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~~~~l~ 90 (204)
+.+..||+|+++|++|+++||+|+.+.++... +++++.+.||.|++|+|+++|.+++||.+|++||+++++..++.
T Consensus 3 y~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~l~ 82 (210)
T TIGR01262 3 YSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPPLL 82 (210)
T ss_pred ccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCCCC
Confidence 44578999999999999999999999988622 46789999999999999999999999999999999999877777
Q ss_pred CC--hHHhhhhcchHHH-----------HHHhhcCC---CC---CchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhH
Q 028772 91 NP--PEFASLGSKIFPS-----------FVNFLKSK---DP---NDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVD 151 (204)
Q Consensus 91 ~~--~~~~~~~~~l~~~-----------~~~~~~~~---~~---~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD 151 (204)
|. .+++++..++... +..++... .. .+...+.+.+.|+.||++|++++++||+|+++|+||
T Consensus 83 p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~AD 162 (210)
T TIGR01262 83 PADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLAD 162 (210)
T ss_pred CCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHH
Confidence 64 3555555543211 11111111 11 112345678899999999997667899999999999
Q ss_pred HHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 152 LSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
+.+++.+.++... ... .+.+|+|++|++++.+||++++++...
T Consensus 163 i~~~~~l~~~~~~-----~~~-~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 163 LCLVPQVYNAERF-----GVD-LTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHHHc-----CCC-cccchHHHHHHHHHhcCHHHHHhCccc
Confidence 9999998875421 222 278999999999999999999988653
No 10
>PLN02395 glutathione S-transferase
Probab=99.98 E-value=3.5e-31 Score=201.02 Aligned_cols=187 Identities=22% Similarity=0.286 Sum_probs=140.2
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIV 77 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~ 77 (204)
|+++||.- .+++++|++++|.++|++|+.+.++..+ .+++|++.||.|+||+|+++|.+++||.+|+
T Consensus 1 ~~~~ly~~----------~~~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~ 70 (215)
T PLN02395 1 MVLKVYGP----------AFASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIM 70 (215)
T ss_pred CeEEEEcC----------CcCcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHH
Confidence 78888853 2245899999999999999999998753 4678999999999999999999999999999
Q ss_pred HHHHHhCCCC--CCCCCh--HHhhhhcchHH-------HHHH----h-hc---CCCCC----chHHHHHHHHHHHHHHHH
Q 028772 78 RIIEEKYPEP--SLTNPP--EFASLGSKIFP-------SFVN----F-LK---SKDPN----DGTEQALLEELKALDEHL 134 (204)
Q Consensus 78 ~yL~~~~~~~--~l~~~~--~~~~~~~~l~~-------~~~~----~-~~---~~~~~----~~~~~~~~~~l~~le~~L 134 (204)
+||+++++.. .++|.+ +++++..|+.. .+.. . +. ..... +...+.+.+.++.||++|
T Consensus 71 ~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 150 (215)
T PLN02395 71 RYYAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARL 150 (215)
T ss_pred HHHHHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999753 467643 55555555431 1111 0 11 11111 234566778899999999
Q ss_pred hhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhhhc
Q 028772 135 KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYAVF 202 (204)
Q Consensus 135 ~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~~~ 202 (204)
+.+ +|++|+++|+||+++++++.++... .......+.+|+|++|++++.++|+++++++....
T Consensus 151 ~~~--~~l~G~~~s~ADi~l~~~~~~~~~~---~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~~~ 213 (215)
T PLN02395 151 SKS--KYLAGDFVSLADLAHLPFTEYLVGP---IGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKYSL 213 (215)
T ss_pred cCC--ccccCCCcCHHHHHHHHHHHHHhcc---cchhhhhccCchHHHHHHHHHcChHHHHHHHHhcC
Confidence 865 9999999999999999988765321 11111236789999999999999999999987653
No 11
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.97 E-value=5.5e-31 Score=200.03 Aligned_cols=171 Identities=18% Similarity=0.212 Sum_probs=129.9
Q ss_pred CchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEe-----CC--eeeechHHHHHHHHHhCCCCCC
Q 028772 20 CPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKF-----DD--KWVADSDVIVRIIEEKYPEPSL 89 (204)
Q Consensus 20 sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~-----~~--~~l~es~aI~~yL~~~~~~~~l 89 (204)
+|+|++|+++|+++||+|+.+.++... ..++|+++||.|+||+|++ +| .+|+||.||++||+++++. +
T Consensus 9 ~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~~--l 86 (215)
T PRK13972 9 TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGL--F 86 (215)
T ss_pred CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcCC--C
Confidence 689999999999999999999998754 3678999999999999997 45 4799999999999999863 3
Q ss_pred CC--ChHHhhhhcchHHHH---HHhh------cC--CCCC----chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHH
Q 028772 90 TN--PPEFASLGSKIFPSF---VNFL------KS--KDPN----DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDL 152 (204)
Q Consensus 90 ~~--~~~~~~~~~~l~~~~---~~~~------~~--~~~~----~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~ 152 (204)
.| +.+++++..|+.... ...+ .. .... +.....+.+.+..+|++|+++ +|++|+++|+||+
T Consensus 87 ~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~Gd~~t~ADi 164 (215)
T PRK13972 87 LSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENS--PWLGGENYSIADI 164 (215)
T ss_pred CCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccC--ccccCCCCCHHHH
Confidence 44 346777766663221 1111 00 1111 223356777899999999865 9999999999999
Q ss_pred HHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 153 SLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
++++.+...... ... .+++|+|.+|++++.+||++++++...
T Consensus 165 ~l~~~~~~~~~~-----~~~-~~~~P~l~~w~~r~~~rp~~~~~~~~~ 206 (215)
T PRK13972 165 ACWPWVNAWTRQ-----RID-LAMYPAVKNWHERIRSRPATGQALLKA 206 (215)
T ss_pred HHHHHHHHHhhc-----CCc-chhCHHHHHHHHHHHhCHHHHHHHHHh
Confidence 999877543321 222 278999999999999999999887653
No 12
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.97 E-value=2.1e-30 Score=194.75 Aligned_cols=173 Identities=18% Similarity=0.311 Sum_probs=133.8
Q ss_pred CchHHHHHHHHHhcCCCceEEeecCCC----CchhhhhhCCCCCccEEEe-CCeeeechHHHHHHHHHhCCCCCCCCC--
Q 028772 20 CPFSQRALLTLEEKKVPYKRHLINISD----KPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRIIEEKYPEPSLTNP-- 92 (204)
Q Consensus 20 sp~~~~v~~~L~~~gi~~~~~~v~~~~----~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~yL~~~~~~~~l~~~-- 92 (204)
+++|++++++|+++||+|+.+.++..+ .+++|.+.||.|++|+|++ +|.+|+||.+|++||+++++...+.++
T Consensus 8 ~s~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~~ 87 (201)
T PRK10542 8 GACSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVG 87 (201)
T ss_pred cHHHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCCC
Confidence 347999999999999999999999854 3478999999999999985 789999999999999999987765532
Q ss_pred -hHHhhhhcchHHH-------HHHhhcCCCCC---chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHH
Q 028772 93 -PEFASLGSKIFPS-------FVNFLKSKDPN---DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHL 161 (204)
Q Consensus 93 -~~~~~~~~~l~~~-------~~~~~~~~~~~---~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~ 161 (204)
.+++++..|+... +..++...... ......+.+.++.+|++|+.+ +||+|+++|+||+++++++.+.
T Consensus 88 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~s~ADi~l~~~~~~~ 165 (201)
T PRK10542 88 SLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALADE--QWICGQRFTIADAYLFTVLRWA 165 (201)
T ss_pred cHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhcCC--CeeeCCCCcHHhHHHHHHHHHh
Confidence 3555555544321 11222211111 223567788899999999865 8999999999999999998876
Q ss_pred HHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 162 QVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 162 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
... +.+. +.+|+|.+|++++.++|+++++++..
T Consensus 166 ~~~-----~~~~-~~~p~l~~w~~~~~~~p~~k~~~~~~ 198 (201)
T PRK10542 166 YAV-----KLNL-EGLEHIAAYMQRVAERPAVAAALKAE 198 (201)
T ss_pred hcc-----CCCc-ccchHHHHHHHHHHcCHHHHHHHHHc
Confidence 422 2222 67999999999999999999998753
No 13
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.97 E-value=6.1e-30 Score=192.88 Aligned_cols=173 Identities=13% Similarity=0.153 Sum_probs=129.1
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhh--------hhCCCCCccEEEeCCeeeechHHHHHHHHHhCCCCCC
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFM--------EISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEPSL 89 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~--------~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~~~~l 89 (204)
+.++.+.++|++|+++|++|+.+.++. ..+ +++ +.||.|++|+|+++|.+++||.||++||+++++..
T Consensus 11 ~~~~~~~~vrl~L~~~gi~ye~~~~~~-~~~-~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~~~-- 86 (205)
T PTZ00057 11 DARGKAELIRLIFAYLGIEYTDKRFGE-NGD-AFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYLSKKYKIC-- 86 (205)
T ss_pred CCCcchHHHHHHHHHcCCCeEEEeccc-cch-HHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCC--
Confidence 578999999999999999999997753 222 333 47999999999999999999999999999999743
Q ss_pred CCChHHhhhhcchHH-HHHHhh----c----CCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHH
Q 028772 90 TNPPEFASLGSKIFP-SFVNFL----K----SKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYH 160 (204)
Q Consensus 90 ~~~~~~~~~~~~l~~-~~~~~~----~----~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~ 160 (204)
+...+++...++.. ....+. . .....+...+.+.+.++.||++|++++++|++|+++|+||+++++++.+
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~ 165 (205)
T PTZ00057 87 -GESELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDD 165 (205)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHH
Confidence 33344443333221 111111 0 0011123456778889999999987767899999999999999999887
Q ss_pred HHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 161 LQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 161 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
+.... +.++ +.+|+|.+|++++.++|+++++++.-
T Consensus 166 ~~~~~----~~~l-~~~P~l~~~~~r~~~~P~~k~y~~~~ 200 (205)
T PTZ00057 166 IETKY----PNSL-KNFPLLKAHNEFISNLPNIKNYISNR 200 (205)
T ss_pred HHHhC----hhhh-ccChhHHHHHHHHHhChHHHHHHHhC
Confidence 65311 2222 78999999999999999999998753
No 14
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=8.8e-30 Score=192.86 Aligned_cols=169 Identities=26% Similarity=0.428 Sum_probs=132.9
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC--CchhhhhhCCCCCccEEEeCCe-eeechHHHHHHHHHhCCCCCCCCCh-
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD--KPQWFMEISPEGKVPVVKFDDK-WVADSDVIVRIIEEKYPEPSLTNPP- 93 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~--~~~~~~~~~p~g~vP~L~~~~~-~l~es~aI~~yL~~~~~~~~l~~~~- 93 (204)
..||||.|++++|.++|++|+.+.++... .+++|+++||.|+||+|+++|. +++||.||++||+++||...++|.+
T Consensus 7 ~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~l~p~~~ 86 (211)
T COG0625 7 PTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGPPLLPADP 86 (211)
T ss_pred CCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCCcCCCCc
Confidence 56799999999999999999999999974 6789999999999999999875 8999999999999999977667643
Q ss_pred ----HHhhhhcchHH-------HHHHhhcCC---------CCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHH
Q 028772 94 ----EFASLGSKIFP-------SFVNFLKSK---------DPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLS 153 (204)
Q Consensus 94 ----~~~~~~~~l~~-------~~~~~~~~~---------~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~ 153 (204)
+++.+..|+.. .+....... ...+.....+.+.++.+|+.|+.+ +|++|+++|+||+.
T Consensus 87 ~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~tiAD~~ 164 (211)
T COG0625 87 LARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADG--PYLAGDRFTIADIA 164 (211)
T ss_pred hhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccC--CcccCCCCCHHHHH
Confidence 34444444322 111111111 111334567888899999999986 99999999999999
Q ss_pred HHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchH
Q 028772 154 LAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHE 194 (204)
Q Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 194 (204)
+++.+.++... +... +.+|++.+|++|+.++|+++
T Consensus 165 ~~~~~~~~~~~-----~~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 165 LAPLLWRLALL-----GEEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHhhhc-----Cccc-ccChHHHHHHHHHHcCCchh
Confidence 99999985432 2212 67999999999999999965
No 15
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.4e-29 Score=178.31 Aligned_cols=184 Identities=24% Similarity=0.351 Sum_probs=146.8
Q ss_pred ccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCC----chhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhC
Q 028772 9 AAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDK----PQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 9 ~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~----~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~ 84 (204)
++++.++.+..|+.|+|||++|..+||+|+.+.+++-.. ..+|.+.||+++||+|++||.+++||.||++||++.+
T Consensus 3 ~~KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~ 82 (217)
T KOG0868|consen 3 AAKPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETY 82 (217)
T ss_pred cccchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcC
Confidence 457778888999999999999999999999999998542 4489999999999999999999999999999999999
Q ss_pred CCCCCCCChH--Hhhhhcc---h-------HH-HHHHhhcCCCC---CchHHHHHHHHHHHHHHHHhhcCCCcccCCCCC
Q 028772 85 PEPSLTNPPE--FASLGSK---I-------FP-SFVNFLKSKDP---NDGTEQALLEELKALDEHLKTHGGPFIAGEKVT 148 (204)
Q Consensus 85 ~~~~l~~~~~--~~~~~~~---l-------~~-~~~~~~~~~~~---~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T 148 (204)
|+++++|.+. |+...+- + .+ .+..++..+.. ..=+...+.+.+..||+.|..+.|+|.+||++|
T Consensus 83 P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevt 162 (217)
T KOG0868|consen 83 PDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVT 162 (217)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceee
Confidence 9999998653 3322111 1 11 22233333322 122345677889999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHh
Q 028772 149 AVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLS 198 (204)
Q Consensus 149 ~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~ 198 (204)
+||+.+.|.++..... ..++ ..||.+.+..+.+.+.|+|+.+..
T Consensus 163 iADl~L~pqv~nA~rf-----~vdl-~PYPti~ri~e~l~elpaFq~ahP 206 (217)
T KOG0868|consen 163 IADLCLPPQVYNANRF-----HVDL-TPYPTITRINEELAELPAFQAAHP 206 (217)
T ss_pred hhhhccchhhhhhhhc-----cccC-CcCchHHHHHHHHHhCHHHHhcCC
Confidence 9999999999886432 2333 789999999999999999987643
No 16
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.96 E-value=1.9e-28 Score=184.39 Aligned_cols=177 Identities=14% Similarity=0.077 Sum_probs=133.0
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEE-eCCeeeechHHHHHHHHHhCCCCCCCCCh-
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVK-FDDKWVADSDVIVRIIEEKYPEPSLTNPP- 93 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~-~~~~~l~es~aI~~yL~~~~~~~~l~~~~- 93 (204)
....||+++++|++|+++|++|+.+.++...+++++.+.||.|++|+|+ ++|.+++||.+|++||+++++...+.|.+
T Consensus 5 ~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~ 84 (202)
T PRK10357 5 GSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAMLPRDP 84 (202)
T ss_pred cCCCCchHHHHHHHHHHcCCCCeEEecCCCCCchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCCCCCCH
Confidence 3468999999999999999999999888776777788899999999998 57899999999999999999876777744
Q ss_pred -HHhhhhcchHH------HHHHhh----cC-CCCC----chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhH
Q 028772 94 -EFASLGSKIFP------SFVNFL----KS-KDPN----DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPK 157 (204)
Q Consensus 94 -~~~~~~~~l~~------~~~~~~----~~-~~~~----~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~ 157 (204)
+++++..++.- ...... .. .... +...+.+.+.|+.+|++|.+. + ++||++|+||+.+++.
T Consensus 85 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~-l~Gd~~t~ADi~l~~~ 161 (202)
T PRK10357 85 LAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDG--T-LKTDTVNLATIAIACA 161 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccC--c-ccCCCcCHHHHHHHHH
Confidence 34443333211 001001 11 1111 234567788899999999854 7 9999999999999999
Q ss_pred HHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHh
Q 028772 158 LYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLS 198 (204)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~ 198 (204)
+.++.... . +.....++|+|.+|++++.+||+|+++.-
T Consensus 162 l~~~~~~~--~-~~~~~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 162 VGYLNFRR--V-APGWCVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHhcc--c-CcchhhcChHHHHHHHHHhcChhhhhcCC
Confidence 88764311 1 11122678999999999999999998753
No 17
>PRK11752 putative S-transferase; Provisional
Probab=99.96 E-value=3.1e-28 Score=189.97 Aligned_cols=176 Identities=22% Similarity=0.270 Sum_probs=131.8
Q ss_pred CCchHHHHHHHHHhc------CCCceEEeecCCC---CchhhhhhCCCCCccEEEeC----CeeeechHHHHHHHHHhCC
Q 028772 19 DCPFSQRALLTLEEK------KVPYKRHLINISD---KPQWFMEISPEGKVPVVKFD----DKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 19 ~sp~~~~v~~~L~~~------gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~----~~~l~es~aI~~yL~~~~~ 85 (204)
.||+|+||+++|+++ |++|+.+.++... .+++|++.||.|+||+|+++ +.+|+||.||++||+++++
T Consensus 51 ~s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~ 130 (264)
T PRK11752 51 GTPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFG 130 (264)
T ss_pred CCCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcC
Confidence 599999999999997 8999999998754 46789999999999999985 3689999999999999987
Q ss_pred CCCCCCC--hHHhhhhcchHHHH----------HHhh-cCCCCC----chHHHHHHHHHHHHHHHHhhcCCCcccCCCCC
Q 028772 86 EPSLTNP--PEFASLGSKIFPSF----------VNFL-KSKDPN----DGTEQALLEELKALDEHLKTHGGPFIAGEKVT 148 (204)
Q Consensus 86 ~~~l~~~--~~~~~~~~~l~~~~----------~~~~-~~~~~~----~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T 148 (204)
. +.|. .+++++..|+.... ..++ ..+... +.....+.+.|+.||++|+++ +||+|+++|
T Consensus 131 ~--L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~--~fl~Gd~~T 206 (264)
T PRK11752 131 A--FLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEH--EYIAGDEYT 206 (264)
T ss_pred C--cCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccC--CCCCCCccC
Confidence 3 6663 35666666644210 0111 111111 223456778899999999865 999999999
Q ss_pred hhHHHHHhHHHHHHHHHh-cccCCCCCccchHHHHHHHHhhcCcchHhhHh
Q 028772 149 AVDLSLAPKLYHLQVALE-HFKQWTVPESLAHVHGYTKDGCRRSMHELVLS 198 (204)
Q Consensus 149 ~aD~~~~~~l~~~~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~ 198 (204)
+|||++++++.++..... ........+.+|+|.+|++++.++|++++++.
T Consensus 207 lADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~ 257 (264)
T PRK11752 207 IADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRI 257 (264)
T ss_pred HHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHh
Confidence 999999998877643100 00011113679999999999999999999875
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.95 E-value=1.7e-27 Score=180.14 Aligned_cols=167 Identities=22% Similarity=0.331 Sum_probs=124.3
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEE-EeCCeeeechHHHHHHHHHhCCCCCCCCChH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVV-KFDDKWVADSDVIVRIIEEKYPEPSLTNPPE 94 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L-~~~~~~l~es~aI~~yL~~~~~~~~l~~~~~ 94 (204)
.+..||+|+|++++|+++||+|+.+.++..+... ..+.||.|+||+| .++|.+++||.+|++||+++||.+.+. ...
T Consensus 5 ~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~~~-~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l~-~~~ 82 (210)
T PRK10387 5 IYDHCPFCVKARMIFGLKNIPVELIVLANDDEAT-PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKPLLT-GKR 82 (210)
T ss_pred eCCCCchHHHHHHHHHHcCCCeEEEEcCCCchhh-HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCccCC-Ccc
Confidence 3478999999999999999999998886544222 3678999999999 578899999999999999999875443 334
Q ss_pred HhhhhcchHHHHHH---h----hcCC---C--------------------------CCchHHHHHHHHHHHHHHHHhhcC
Q 028772 95 FASLGSKIFPSFVN---F----LKSK---D--------------------------PNDGTEQALLEELKALDEHLKTHG 138 (204)
Q Consensus 95 ~~~~~~~l~~~~~~---~----~~~~---~--------------------------~~~~~~~~~~~~l~~le~~L~~~~ 138 (204)
++.+..|+...... . +... . ..+...+.+++.|+.+|++|+ +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~- 160 (210)
T PRK10387 83 SPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIV-K- 160 (210)
T ss_pred cHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhc-C-
Confidence 55555554321110 0 0000 0 012345678888999999996 2
Q ss_pred CCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchH
Q 028772 139 GPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHE 194 (204)
Q Consensus 139 ~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 194 (204)
+||+|+++|+||+++++++.++... .+. ..+|+|.+|++|+.+||++.
T Consensus 161 -~~l~G~~~s~ADi~l~~~l~~~~~~----~~~---~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 161 -PNAVNGELSTDDIHLFPILRNLTLV----KGI---EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred -ccccCCCCCHHHHHHHHHHhcceee----cCC---CCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999887532 122 23599999999999999863
No 19
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=2.9e-26 Score=174.81 Aligned_cols=185 Identities=22% Similarity=0.223 Sum_probs=145.9
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIV 77 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~ 77 (204)
|..+||.. ..||.|+++.+++.++|++|+.+.++... .+++|+++||.|+||+|+++|..++||.||+
T Consensus 1 ~~~~ly~~---------~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~ 71 (226)
T KOG0867|consen 1 MKLKLYGH---------LGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAIL 71 (226)
T ss_pred CCceEeec---------CCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHH
Confidence 55566655 78999999999999999999999777644 6889999999999999999999999999999
Q ss_pred HHHHHhCC-CCC-CCCCh--HHhhhhcchHHHHHHhhc-----------------CCCCCchHHHHHHHHHHHHHHHHhh
Q 028772 78 RIIEEKYP-EPS-LTNPP--EFASLGSKIFPSFVNFLK-----------------SKDPNDGTEQALLEELKALDEHLKT 136 (204)
Q Consensus 78 ~yL~~~~~-~~~-l~~~~--~~~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~le~~L~~ 136 (204)
.||.++|. ..+ ++|.+ .++.+.++++.....+.. ...........+.+.++.+|++|.+
T Consensus 72 ~Yl~~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 151 (226)
T KOG0867|consen 72 RYLAEKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKT 151 (226)
T ss_pred HHHHHHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHcc
Confidence 99999997 223 55543 567777766432211111 1112356678999999999999998
Q ss_pred cCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhh
Q 028772 137 HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSY 199 (204)
Q Consensus 137 ~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~ 199 (204)
+ .|++|+++|+||+.+.+.+..+... .. ......++|++.+|++++.++|++++....
T Consensus 152 ~--~yl~g~~~tlADl~~~~~~~~~~~~--~~-~~~~~~~~p~v~~W~~~~~~~P~~~e~~~~ 209 (226)
T KOG0867|consen 152 Q--VYLAGDQLTLADLSLASTLSQFQGK--FA-TEKDFEKYPKVARWYERIQKRPAYEEANEK 209 (226)
T ss_pred C--CcccCCcccHHHHHHhhHHHHHhHh--hh-hhhhhhhChHHHHHHHHHHhCccHHHHHHH
Confidence 7 9999999999999999999987421 11 122348899999999999999999887654
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.94 E-value=1.8e-26 Score=174.35 Aligned_cols=167 Identities=19% Similarity=0.280 Sum_probs=121.6
Q ss_pred CCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEE-eCCeeeechHHHHHHHHHhCCCCCCCCCh
Q 028772 15 DILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVK-FDDKWVADSDVIVRIIEEKYPEPSLTNPP 93 (204)
Q Consensus 15 ~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~-~~~~~l~es~aI~~yL~~~~~~~~l~~~~ 93 (204)
+.+..||||+|||++|.++|++|+.+.+...+. ....+.||.|++|+|+ ++|.+++||.+|++||+++||.+. .++.
T Consensus 3 y~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~~-~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~-~~~~ 80 (209)
T TIGR02182 3 YIYDHCPFCVRARMIFGLKNIPVEKHVLLNDDE-ETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL-LTGK 80 (209)
T ss_pred ecCCCCChHHHHHHHHHHcCCCeEEEECCCCcc-hhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc-CCCC
Confidence 445889999999999999999999887654332 2357899999999998 788999999999999999998643 3333
Q ss_pred HHhhhhcchHH---HHHHhh----cCCC-----------------------------CCchHHHHHHHHHHHHHHHHhhc
Q 028772 94 EFASLGSKIFP---SFVNFL----KSKD-----------------------------PNDGTEQALLEELKALDEHLKTH 137 (204)
Q Consensus 94 ~~~~~~~~l~~---~~~~~~----~~~~-----------------------------~~~~~~~~~~~~l~~le~~L~~~ 137 (204)
.+.++..|+.. .+...+ .... ..++..+.+++.|+.+|++|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~ 160 (209)
T TIGR02182 81 VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGP 160 (209)
T ss_pred ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCc
Confidence 34444444321 111111 0000 01345567888999999999976
Q ss_pred CCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccch-HHHHHHHHhhcCcchH
Q 028772 138 GGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLA-HVHGYTKDGCRRSMHE 194 (204)
Q Consensus 138 ~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~~ 194 (204)
+|+.| ++|+||+++++.+.++.... + ..+| +|.+|++|+++++++.
T Consensus 161 --~~l~g-~~TiADi~l~~~l~~~~~~~----~----~~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 161 --NAVNG-ELSEDDILVFPLLRNLTLVA----G----INWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred --cccCC-CCCHHHHHHHHHhcCeeeec----C----CCCChHHHHHHHHHHHHhCCC
Confidence 99955 69999999999998755311 1 1246 9999999999998763
No 21
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=3.8e-24 Score=158.60 Aligned_cols=186 Identities=17% Similarity=0.179 Sum_probs=138.2
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
|.+.|++. ...-++..+|++++..|++|+++++...+.-.......|.|++|+|..||..|.||.||++||
T Consensus 2 ~~ykL~Yf---------~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyL 72 (206)
T KOG1695|consen 2 PPYKLTYF---------NIRGLAEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPFGQLPVLEVDGKKLVQSRAILRYL 72 (206)
T ss_pred CceEEEec---------CcchhHHHHHHHHHhcCCCcceeeeccccchhhhcccCCCCCCCEEeECCEeeccHHHHHHHH
Confidence 34566666 566778999999999999999999998873222455689999999999999999999999999
Q ss_pred HHhCCCCCCCCChHHhhhhc------chHHHHH-HhhcCCC---CCc----hHHHHHHHHHHHHHHHHhhcCCCcccCCC
Q 028772 81 EEKYPEPSLTNPPEFASLGS------KIFPSFV-NFLKSKD---PND----GTEQALLEELKALDEHLKTHGGPFIAGEK 146 (204)
Q Consensus 81 ~~~~~~~~l~~~~~~~~~~~------~l~~~~~-~~~~~~~---~~~----~~~~~~~~~l~~le~~L~~~~~~yl~G~~ 146 (204)
+++|+-.+ ..+.+.+.++. ++...+. ....... ..+ .......+.+..+++.|..+++.||+||+
T Consensus 73 Ark~gl~G-kt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~ 151 (206)
T KOG1695|consen 73 ARKFGLAG-KTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDK 151 (206)
T ss_pred HHHhCcCC-CCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCc
Confidence 99998544 33444444432 2222211 1111111 111 22335567788999999988888999999
Q ss_pred CChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 147 VTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 147 ~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
+|+||+.++..+..+... . .....+.+|+|+++.+++.++|.++++++.-
T Consensus 152 lT~aDl~i~e~l~~l~~~---~-~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r 201 (206)
T KOG1695|consen 152 LTWADLVIAEHLDTLEEL---L-DPSALDHFPKLKAFKERVSSIPNIKKYLESR 201 (206)
T ss_pred ccHHHHHHHHHHHHHHHh---c-CchhhccChHHHHHHHHHhcCchHHHHHhcC
Confidence 999999999999988753 1 2222367899999999999999999998753
No 22
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.92 E-value=1.8e-24 Score=140.29 Aligned_cols=85 Identities=26% Similarity=0.525 Sum_probs=80.8
Q ss_pred ceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
++|||+|+|.++.. .+.||||+|+|++|+++||+|+.+.+++.+++++|+++||.|++|+|+++|.+++||.+|++||+
T Consensus 5 ~~el~vka~~~~~~-~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLd 83 (91)
T cd03061 5 EIELFVKASSDGES-IGNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLE 83 (91)
T ss_pred cEEEEEEeccCCCC-CCCChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHH
Confidence 57999999988777 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCC
Q 028772 82 EKYPEP 87 (204)
Q Consensus 82 ~~~~~~ 87 (204)
++++.+
T Consensus 84 e~~~~~ 89 (91)
T cd03061 84 ETLCPP 89 (91)
T ss_pred HHccCC
Confidence 998754
No 23
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.92 E-value=2.1e-24 Score=160.62 Aligned_cols=187 Identities=20% Similarity=0.279 Sum_probs=131.8
Q ss_pred CCCCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCCCC-CC
Q 028772 14 PDILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEP-SL 89 (204)
Q Consensus 14 ~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~~~-~l 89 (204)
+++.+.|--|||||+++.++||+|+...|++.+ .++||..+||.|.||||++++.+|.+++.|+.|+++.|-+. .+
T Consensus 29 Lyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger~l 108 (325)
T KOG4420|consen 29 LYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGERVL 108 (325)
T ss_pred eeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcccccc
Confidence 445567777999999999999999999998866 57899999999999999999999999999999999987654 33
Q ss_pred CCChH-----Hh----h------hhcc-----hH---------HH--------------HHHhhcCC-------------
Q 028772 90 TNPPE-----FA----S------LGSK-----IF---------PS--------------FVNFLKSK------------- 113 (204)
Q Consensus 90 ~~~~~-----~~----~------~~~~-----l~---------~~--------------~~~~~~~~------------- 113 (204)
.|..+ +. + ++.+ ++ +. +.......
T Consensus 109 ~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~akqk 188 (325)
T KOG4420|consen 109 MPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAKQK 188 (325)
T ss_pred cccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHH
Confidence 33221 10 0 0000 00 00 00000000
Q ss_pred ---------CCC---chHHHHHHHHHHHHHHHHhhc--CCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchH
Q 028772 114 ---------DPN---DGTEQALLEELKALDEHLKTH--GGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAH 179 (204)
Q Consensus 114 ---------~~~---~~~~~~~~~~l~~le~~L~~~--~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~ 179 (204)
+.. ......+...|+.+|.-|..+ ..+||||+.+|+||+.+.+.|.++...+-.-.-|.. +..|+
T Consensus 189 kl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~-gsrpn 267 (325)
T KOG4420|consen 189 KLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWED-GSRPN 267 (325)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhccc-CCCcc
Confidence 000 112234445566677777764 248999999999999999999998854322222222 57899
Q ss_pred HHHHHHHhhcCcchHhhHhhhh
Q 028772 180 VHGYTKDGCRRSMHELVLSYAV 201 (204)
Q Consensus 180 l~~~~~~~~~~p~~~~~l~~~~ 201 (204)
|..|+.|+++|++|++++.+..
T Consensus 268 le~Yf~rvrrR~sf~kvlg~~f 289 (325)
T KOG4420|consen 268 LESYFERVRRRFSFRKVLGDIF 289 (325)
T ss_pred HHHHHHHHHhhhHHHHhhhhHH
Confidence 9999999999999999987753
No 24
>PLN02907 glutamate-tRNA ligase
Probab=99.87 E-value=6e-21 Score=165.22 Aligned_cols=156 Identities=12% Similarity=0.152 Sum_probs=119.7
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEe-CCeeeechHHHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRI 79 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~y 79 (204)
|+..||.. ...| +.++.++|++.|++|+.+. .+|.|++|+|++ +|.+++||.||++|
T Consensus 1 ~~~kLy~~--------~~S~--~~~v~~~L~~lgv~~e~~~------------~~p~GkVPvLv~ddG~~L~ES~AIl~Y 58 (722)
T PLN02907 1 MEAKLSFP--------PDSP--PLAVIAAAKVAGVPLTIDP------------SLKSGSAPTLLFSSGEKLTGTNVLLRY 58 (722)
T ss_pred CeEEEEEC--------CCCC--hHHHHHHHHHcCCCcEEee------------cCCCCCCcEEEECCCCEEECHHHHHHH
Confidence 67777766 1223 5578999999999999863 368999999995 78999999999999
Q ss_pred HHHhCCCCCCCCCh--HHhhhhcchHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhH
Q 028772 80 IEEKYPEPSLTNPP--EFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPK 157 (204)
Q Consensus 80 L~~~~~~~~l~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~ 157 (204)
|++.++...++|.+ +++++..|+..... +. ....+.+.++.||++|+.+ +||+|+++|+||+++++.
T Consensus 59 La~~~p~~~L~p~d~~erAqV~qWL~~~~~--~~-------~~~~l~~~L~~LE~~L~~r--tYLvGd~lTLADIaL~~~ 127 (722)
T PLN02907 59 IARSASLPGFYGQDAFESSQVDEWLDYAPT--FS-------SGSEFENACEYVDGYLASR--TFLVGYSLTIADIAIWSG 127 (722)
T ss_pred HHHhCCCcCCCCCCHHHHHHHHHHHHHHhh--cc-------cHHHHHHHHHHHHHHhccC--CeecCCCCCHHHHHHHHH
Confidence 99999887777654 56677777653211 11 1135677899999999876 999999999999999999
Q ss_pred HHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcc
Q 028772 158 LYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSM 192 (204)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 192 (204)
+...... +......+.+|+|.+|++++.++|+
T Consensus 128 L~~~~~~---~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 128 LAGSGQR---WESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHhhhhh---hhcccccccCHHHHHHHHHHHhCCC
Confidence 8664211 1111123789999999999999999
No 25
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.81 E-value=1.8e-19 Score=114.26 Aligned_cols=71 Identities=38% Similarity=0.708 Sum_probs=67.7
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCCCC
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEP 87 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~~~ 87 (204)
+..||||+|+|++|+++||+|+.+.++..++.+++.+.||.|++|+|+++|.+++||.+|++||+++|++.
T Consensus 4 ~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 4 FPGSPYSQKVRLALEEKGIPYELVPVDPEEKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp ETTSHHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred cCCChHHHHHHHHHHHcCCeEEEeccCcccchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999988888899999999999999999999999999999999999864
No 26
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.77 E-value=4.6e-18 Score=127.62 Aligned_cols=174 Identities=17% Similarity=0.262 Sum_probs=126.6
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
+-||+.. . ....-.-||||.|+..+|...+|||+.+...+ ...++.|++|.++.||..+.+|.-|..+|.+
T Consensus 46 VYLyQF~-R-~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~-------~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~ 116 (281)
T KOG4244|consen 46 VYLYQFP-R-TKTCPNLSPFCLKVETFLRAYDIPYEIVDCSL-------KRRSRNGTLPFIELNGEHIADSDLIEDRLRK 116 (281)
T ss_pred EEEEecc-c-cCCCCCCChHHHHHHHHHHHhCCCceeccccc-------eeeccCCCcceEEeCCeeccccHHHHHHHHH
Confidence 4566662 2 45566799999999999999999999884443 3567799999999999999999999999999
Q ss_pred hCCCCCCCCChHHhhhh----------------------cch-------------HHHHHHhh-----c-----------
Q 028772 83 KYPEPSLTNPPEFASLG----------------------SKI-------------FPSFVNFL-----K----------- 111 (204)
Q Consensus 83 ~~~~~~l~~~~~~~~~~----------------------~~l-------------~~~~~~~~-----~----------- 111 (204)
.+.-++.++++++++.. .|+ .+.+..++ .
T Consensus 117 hf~~~~~L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~I 196 (281)
T KOG4244|consen 117 HFKIPDDLSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAI 196 (281)
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccc
Confidence 98876646655544310 000 00111111 0
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccC--CCCCccchHHHHHHHHhhc
Q 028772 112 SKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQ--WTVPESLAHVHGYTKDGCR 189 (204)
Q Consensus 112 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~ 189 (204)
+.-+.++..+.+.+.|..++..|+.+ +||+||++|-+|+.+|+.|..+.. +.... --+.+++|+|..|.+|+++
T Consensus 197 G~f~~~Ei~ell~rDlr~i~~~Lg~K--kflfGdkit~~DatvFgqLa~v~Y--P~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 197 GDFESAEIDELLHRDLRAISDYLGDK--KFLFGDKITPADATVFGQLAQVYY--PFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHhCCC--ccccCCCCCcceeeehhhhhheec--cCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 01233456677788899999999977 999999999999999999998764 21111 1134789999999999986
No 27
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.76 E-value=6.8e-18 Score=106.33 Aligned_cols=68 Identities=25% Similarity=0.381 Sum_probs=63.8
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhC
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~ 84 (204)
...||+|++++++|+++|++|+.+.++..++.+++.+.||.|++|+|+++|..++||.+|++||++++
T Consensus 6 ~~~~~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 6 GPDDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CCCChhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 37899999999999999999999999988778899999999999999999999999999999999865
No 28
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.75 E-value=7e-18 Score=106.17 Aligned_cols=66 Identities=26% Similarity=0.455 Sum_probs=60.0
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
....||+|+|+|++|+++|++|+.+.++... +.++|.++||.|++|+|+++|.+++||.+|++||+
T Consensus 5 ~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 5 HWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred cCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3478999999999999999999999988743 46789999999999999999999999999999984
No 29
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.74 E-value=5.4e-17 Score=122.62 Aligned_cols=165 Identities=20% Similarity=0.289 Sum_probs=112.1
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH--------------Hh
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE--------------EK 83 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~--------------~~ 83 (204)
-.||||-|||.+|.+.||+|+++.|+.....+ ++.+-..+||+|...|..+.||++|+.-|+ +.
T Consensus 97 etCPFCcKVrAFLDyhgisY~VVEVnpV~r~e--Ik~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~q~l~eiiq~ 174 (370)
T KOG3029|consen 97 ETCPFCCKVRAFLDYHGISYAVVEVNPVLRQE--IKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKRQDLGEIIQM 174 (370)
T ss_pred ccCchHHHHHHHHhhcCCceEEEEecchhhhh--ccccccccccEEEeccceechhHHHHHHHHHHhccCCCCHHHHHHh
Confidence 79999999999999999999999999865444 455668999999987767999999988663 23
Q ss_pred CCCCCCCCChH--------------------------------HhhhhcchHH----H----------------------
Q 028772 84 YPEPSLTNPPE--------------------------------FASLGSKIFP----S---------------------- 105 (204)
Q Consensus 84 ~~~~~l~~~~~--------------------------------~~~~~~~l~~----~---------------------- 105 (204)
||..+..+++. |.-++.|+.- +
T Consensus 175 yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFewf~q~G~w~ 254 (370)
T KOG3029|consen 175 YPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEWFSQAGEWD 254 (370)
T ss_pred ccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHHHHHcCCcc
Confidence 44221111110 0001111100 0
Q ss_pred ---------------------HHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHH
Q 028772 106 ---------------------FVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVA 164 (204)
Q Consensus 106 ---------------------~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~ 164 (204)
+.+.+..+......++.+.+.++.+-..|+. ..+|+.|++|.+||+++|+.|..+..+
T Consensus 255 ~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgk-nr~flGG~kPnLaDLsvfGvl~sm~gc 333 (370)
T KOG3029|consen 255 VHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGK-NRPFLGGKKPNLADLSVFGVLRSMEGC 333 (370)
T ss_pred ccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCC-CCCccCCCCCchhhhhhhhhhhHhhhh
Confidence 0001111222233566777778888888864 479999999999999999999998765
Q ss_pred HhcccCCCCCccchHHHHHHHHhhc
Q 028772 165 LEHFKQWTVPESLAHVHGYTKDGCR 189 (204)
Q Consensus 165 ~~~~~~~~~~~~~p~l~~~~~~~~~ 189 (204)
. .+++. -.+.++..||.+|++
T Consensus 334 ~-afkd~---~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 334 Q-AFKDC---LQNTSIGEWYYRMEA 354 (370)
T ss_pred h-HHHHH---HhcchHHHHHHHHHH
Confidence 3 23222 356899999999875
No 30
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.74 E-value=1e-17 Score=106.64 Aligned_cols=67 Identities=19% Similarity=0.161 Sum_probs=59.5
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEe--CCeeeechHHHHHHHHHhC
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKF--DDKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~--~~~~l~es~aI~~yL~~~~ 84 (204)
..||||+|++++|.++||+|+.+.++... ..+++.+.||.|++|+|++ +|..++||.+|++||+++|
T Consensus 8 ~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 8 EGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred CCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 79999999999999999999998886543 3568999999999999997 3689999999999999865
No 31
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.74 E-value=9.7e-18 Score=104.72 Aligned_cols=65 Identities=35% Similarity=0.641 Sum_probs=56.3
Q ss_pred CCchHHHHHHHHHhcCCCceEEeecCC----CCchhhhhhCCCCCccEEEe-CCeeeechHHHHHHHHHh
Q 028772 19 DCPFSQRALLTLEEKKVPYKRHLINIS----DKPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 19 ~sp~~~~v~~~L~~~gi~~~~~~v~~~----~~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~yL~~~ 83 (204)
+||||+|++++|+++|++|+...+... .++++|.+.||.|+||+|++ +|.+++||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 699999999999999999999888542 24578999999999999998 789999999999999874
No 32
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.74 E-value=7.7e-18 Score=105.54 Aligned_cols=66 Identities=24% Similarity=0.426 Sum_probs=61.0
Q ss_pred CCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeC-CeeeechHHHHHHH
Q 028772 15 DILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFD-DKWVADSDVIVRII 80 (204)
Q Consensus 15 ~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~-~~~l~es~aI~~yL 80 (204)
+....||||+|++++|+++|++|+.+.++..++.++|.+.||.|++|+|+++ |..++||.+|++|+
T Consensus 4 y~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 4 YSFRRCPYAMRARMALLLAGITVELREVELKNKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EecCCCcHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 3457899999999999999999999999988777899999999999999985 89999999999996
No 33
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.73 E-value=2.1e-17 Score=106.98 Aligned_cols=80 Identities=24% Similarity=0.281 Sum_probs=67.4
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCc---hhhhhhCCCCCccEEEeC-CeeeechHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKP---QWFMEISPEGKVPVVKFD-DKWVADSDVIVR 78 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~---~~~~~~~p~g~vP~L~~~-~~~l~es~aI~~ 78 (204)
++||.+.+... ..+.||+|+|+|++|.++|++|+.+.++..++. +++ +.||.|++|+|+++ |..++||.+|++
T Consensus 1 ~~~~~~~~~~~--~~~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~ 77 (84)
T cd03038 1 ITLYDLAGKDP--VRAFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAE 77 (84)
T ss_pred CeeEeccCCCC--CCCcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHH
Confidence 36777765533 378999999999999999999999998876532 234 78999999999998 899999999999
Q ss_pred HHHHhCC
Q 028772 79 IIEEKYP 85 (204)
Q Consensus 79 yL~~~~~ 85 (204)
||+++||
T Consensus 78 yL~~~~p 84 (84)
T cd03038 78 YLEEAYP 84 (84)
T ss_pred HHHHhCc
Confidence 9999875
No 34
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.73 E-value=2.9e-17 Score=104.27 Aligned_cols=67 Identities=28% Similarity=0.397 Sum_probs=60.8
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
...||+|+++|++|+++|++|+.+.++... .+++|.+.||.|++|+|+++|..++||.||++||+++
T Consensus 7 ~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 7 AAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred CCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 378999999999999999999999888753 4578999999999999999999999999999999863
No 35
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.73 E-value=2e-17 Score=104.51 Aligned_cols=69 Identities=28% Similarity=0.431 Sum_probs=63.2
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCC-CCccEEEeCCeeeechHHHHHHHHHhC
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPE-GKVPVVKFDDKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~-g~vP~L~~~~~~l~es~aI~~yL~~~~ 84 (204)
.+..||+|+|+|++|+++|++|+.+.++...+.++|.+.||. |++|+|+++|.+++||.+|++||++++
T Consensus 5 ~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 5 GAWASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred ECCCCchHHHHHHHHHHcCCCCEEEEeCcccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 347899999999999999999999998887777889999995 999999999999999999999999864
No 36
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.72 E-value=5.1e-17 Score=113.13 Aligned_cols=105 Identities=27% Similarity=0.493 Sum_probs=86.4
Q ss_pred HhhhhcchHHHHHHhhcCC--CCCchHHHHHHHHHHHHHHHHhh--------------cCCCcccCCCCChhHHHHHhHH
Q 028772 95 FASLGSKIFPSFVNFLKSK--DPNDGTEQALLEELKALDEHLKT--------------HGGPFIAGEKVTAVDLSLAPKL 158 (204)
Q Consensus 95 ~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~l~~le~~L~~--------------~~~~yl~G~~~T~aD~~~~~~l 158 (204)
...+...+++.+..++.++ +..+...+.+.+.|+.||++|++ .+++|++|+++|+|||.+++.+
T Consensus 4 ~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L 83 (134)
T cd03198 4 SNTAGEDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKL 83 (134)
T ss_pred hhhhHHHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHH
Confidence 3456778899999998876 34567788999999999999986 2368999999999999999999
Q ss_pred HHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhh
Q 028772 159 YHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSY 199 (204)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~ 199 (204)
.++..+.....++++++++|+|++|++++.+||+|++++..
T Consensus 84 ~~~~~~~~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~ 124 (134)
T cd03198 84 HIVKVVAKKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPA 124 (134)
T ss_pred HHHHHHHHhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCC
Confidence 88765443334555568899999999999999999998754
No 37
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.72 E-value=4.6e-17 Score=102.78 Aligned_cols=66 Identities=20% Similarity=0.257 Sum_probs=60.5
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
...||+|++++++|+++|++|+.+.++..+ +.++|.+.||.|++|+|+++|..++||.||++||++
T Consensus 6 ~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 6 LPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 378999999999999999999999998754 457899999999999999999999999999999974
No 38
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.72 E-value=4.5e-17 Score=106.56 Aligned_cols=64 Identities=42% Similarity=0.778 Sum_probs=59.9
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeC-CeeeechHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFD-DKWVADSDVIVRIIE 81 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~-~~~l~es~aI~~yL~ 81 (204)
..||||++++++|+++|++|+.+.++...+++++.+.||.+++|+|+++ |..++||.+|++||+
T Consensus 25 ~~sp~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 25 RFCPYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred CCCchHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 7899999999999999999999999987777789999999999999987 899999999999984
No 39
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.71 E-value=9.7e-17 Score=103.14 Aligned_cols=66 Identities=32% Similarity=0.527 Sum_probs=60.6
Q ss_pred CchHHHHHHHHHhcCCCceEEeecCC---CCchhhhhhCCCCCccEEEeC---CeeeechHHHHHHHHHhCC
Q 028772 20 CPFSQRALLTLEEKKVPYKRHLINIS---DKPQWFMEISPEGKVPVVKFD---DKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 20 sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~g~vP~L~~~---~~~l~es~aI~~yL~~~~~ 85 (204)
+|+|++++++|+++|++|+.+.++.. .++++|.+.||.|++|+|+++ |..++||.+|++||+++|+
T Consensus 9 ~~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 9 TPNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred CCChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 49999999999999999999999864 356789999999999999997 7999999999999999886
No 40
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=1.8e-17 Score=125.05 Aligned_cols=182 Identities=18% Similarity=0.297 Sum_probs=128.4
Q ss_pred CCCchHHHHHHHHHhcCCC----ceEEeecCCCC----c------------------hhhhhhCCC----CCccEEEeC-
Q 028772 18 GDCPFSQRALLTLEEKKVP----YKRHLINISDK----P------------------QWFMEISPE----GKVPVVKFD- 66 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~----~~~~~v~~~~~----~------------------~~~~~~~p~----g~vP~L~~~- 66 (204)
-.|||++|..++-..+|++ +.++.-.+.++ . +-|....|. -+||+|-+-
T Consensus 58 laCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVPVLwDk~ 137 (324)
T COG0435 58 LACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVPVLWDKK 137 (324)
T ss_pred ecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEEEEEecC
Confidence 4899999999999999973 33322222110 0 123344452 378999874
Q ss_pred --CeeeechHHHHHHHHHhCC-----CCCCCCChHHhhhh---cchHHHHHH-hh-----cCCCCCchHHHHHHHHHHHH
Q 028772 67 --DKWVADSDVIVRIIEEKYP-----EPSLTNPPEFASLG---SKIFPSFVN-FL-----KSKDPNDGTEQALLEELKAL 130 (204)
Q Consensus 67 --~~~l~es~aI~~yL~~~~~-----~~~l~~~~~~~~~~---~~l~~~~~~-~~-----~~~~~~~~~~~~~~~~l~~l 130 (204)
..+-.||..|++.+...|. ..+++|.+-+.+++ .++++.+.. .. ..++.-+++.+.+.+.|+.+
T Consensus 138 ~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~l 217 (324)
T COG0435 138 TQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEALRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAVKKLFEALDKL 217 (324)
T ss_pred CCeeecCCcHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHhhhcccccCceeeecccchHHHHHHHHHHHHHHHHHH
Confidence 3667899999999887653 23678877666655 444444322 11 11223356677888889999
Q ss_pred HHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHH-hccc-CCCCCccchHHHHHHHHhhcCcchHhhHhhhh
Q 028772 131 DEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVAL-EHFK-QWTVPESLAHVHGYTKDGCRRSMHELVLSYAV 201 (204)
Q Consensus 131 e~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~-~~~~-~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~~ 201 (204)
|+.|+++ .||+||++|.||+.+|+.|.++.... ++++ +..-..+||+|..|.+.+.+.|.|+.++..-+
T Consensus 218 E~~L~~~--ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~df~h 288 (324)
T COG0435 218 EQILSER--RYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETVDFDH 288 (324)
T ss_pred HHHhhcC--eeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccccccchhH
Confidence 9999988 99999999999999999999987442 3443 33334679999999999999999998876543
No 41
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.70 E-value=4.8e-17 Score=102.47 Aligned_cols=65 Identities=14% Similarity=0.152 Sum_probs=60.0
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
..|++|+++|++|+++|++|+.+.++...+.+++.+.||.|++|+|+++|.+++||.||++||++
T Consensus 8 ~~~~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 8 PVRGRAEAIRLLLADQGISWEEERVTYEEWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred CCcchHHHHHHHHHHcCCCCEEEEecHHHhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 56999999999999999999999998755566799999999999999999999999999999986
No 42
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.70 E-value=6.6e-17 Score=102.40 Aligned_cols=69 Identities=19% Similarity=0.158 Sum_probs=62.0
Q ss_pred CCCCCCCchHHHHHHHHHhcCCCceEEeecCC--CCchhhhhhCCCCCccEEEe-CCeeeechHHHHHHHHH
Q 028772 14 PDILGDCPFSQRALLTLEEKKVPYKRHLINIS--DKPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRIIEE 82 (204)
Q Consensus 14 ~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~--~~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~yL~~ 82 (204)
++.+..||+|++++++|+++|++|+.+.++.. .+.++|.++||.|++|+|++ +|.+++||.||++||++
T Consensus 3 Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 3 LYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred EecCCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 44567899999999999999999999999986 35678999999999999997 48899999999999985
No 43
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.70 E-value=1.7e-16 Score=100.79 Aligned_cols=68 Identities=26% Similarity=0.346 Sum_probs=61.8
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhC
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~ 84 (204)
...|++|++++++|+++|++|+.+.++..+ +.+++.+.||.|++|+|+++|.+++||.||++||+++|
T Consensus 6 ~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 6 DLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 468999999999999999999999998754 34689999999999999999999999999999999865
No 44
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.69 E-value=1.3e-16 Score=100.46 Aligned_cols=66 Identities=27% Similarity=0.357 Sum_probs=60.7
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC--CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD--KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~--~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
+...||+|++++++|+++|++|+.+.++... ..++|.+.||.|++|+|+++|.+++||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 6689999999999999999999999998764 35789999999999999999999999999999984
No 45
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.67 E-value=3.2e-16 Score=98.55 Aligned_cols=66 Identities=23% Similarity=0.394 Sum_probs=59.9
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
.+..||+|++++++|+++|++|+.+.++... +.++|.+.||.|++|+|+++|..++||.+|++||+
T Consensus 5 ~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 5 GFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred eCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3478999999999999999999999998643 56789999999999999999999999999999984
No 46
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.67 E-value=5.8e-16 Score=98.03 Aligned_cols=74 Identities=24% Similarity=0.457 Sum_probs=62.7
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
++||..... ......||+|+|++++|+++|++|+.+.++. .+.||.|++|+|+++|.+++||.+|++||++
T Consensus 2 ~~L~~~~~~--~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~-------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~~ 72 (75)
T cd03080 2 ITLYQFPRA--FGVPSLSPFCLKVETFLRMAGIPYENKFGGL-------AKRSPKGKLPFIELNGEKIADSELIIDHLEE 72 (75)
T ss_pred EEEEecCCC--CCCCCCCHHHHHHHHHHHHCCCCcEEeecCc-------ccCCCCCCCCEEEECCEEEcCHHHHHHHHHH
Confidence 477777332 3344689999999999999999999987764 3689999999999999999999999999999
Q ss_pred hCC
Q 028772 83 KYP 85 (204)
Q Consensus 83 ~~~ 85 (204)
+|+
T Consensus 73 ~~~ 75 (75)
T cd03080 73 KYG 75 (75)
T ss_pred HcC
Confidence 874
No 47
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.67 E-value=2e-16 Score=99.40 Aligned_cols=65 Identities=22% Similarity=0.260 Sum_probs=58.4
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDK-PQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
..|++|+++|++|+++|++|+.+.++..++ ..++.+.||.|++|+|+++|..++||.+|++||++
T Consensus 7 ~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 7 NIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred cCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 678999999999999999999999887543 33488999999999999999999999999999974
No 48
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.67 E-value=6e-16 Score=106.89 Aligned_cols=108 Identities=63% Similarity=0.983 Sum_probs=89.0
Q ss_pred ChHHhhhhcchHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCC
Q 028772 92 PPEFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW 171 (204)
Q Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~ 171 (204)
+.+.......++..+..++..+...++..+.+.+.|..||++|++ +++||+||++|+||+++++++.++....+.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~-~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~ 82 (121)
T cd03201 4 PPEKASVGSKIFSTFVGFLKSKDSNDGTEQALLDELEALEDHLKE-NGPFINGEKISAVDLSLAPKLYHLEIALGHYKNW 82 (121)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCC
Confidence 456677788889999998888777677788899999999999985 2499999999999999999988776543433345
Q ss_pred CCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 172 TVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 172 ~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
.+.+.+|+|.+|++++.+||+|++++...
T Consensus 83 ~~~~~~P~l~~w~~rl~~rps~~~t~~~~ 111 (121)
T cd03201 83 SVPESLTSVKSYMKALFSRESFVKTKAEK 111 (121)
T ss_pred CCcccchHHHHHHHHHHCCchhhhcCCCH
Confidence 44578999999999999999999987743
No 49
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.66 E-value=6.5e-16 Score=97.98 Aligned_cols=61 Identities=30% Similarity=0.442 Sum_probs=54.8
Q ss_pred hHHHHHHHHHhcCCCceEEeecCCCC---chhhhhhCCC-CCccEEEeC-CeeeechHHHHHHHHH
Q 028772 22 FSQRALLTLEEKKVPYKRHLINISDK---PQWFMEISPE-GKVPVVKFD-DKWVADSDVIVRIIEE 82 (204)
Q Consensus 22 ~~~~v~~~L~~~gi~~~~~~v~~~~~---~~~~~~~~p~-g~vP~L~~~-~~~l~es~aI~~yL~~ 82 (204)
+|.++|++|+++|++|+.+.++...+ .++|.+.||. |++|+|+++ |.+++||.||++||++
T Consensus 11 ~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 11 RSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp TTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred chHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 79999999999999999999998553 4889999999 999999999 9999999999999985
No 50
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.66 E-value=9e-16 Score=97.65 Aligned_cols=64 Identities=23% Similarity=0.476 Sum_probs=58.4
Q ss_pred hHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeC-CeeeechHHHHHHHHHhCC
Q 028772 22 FSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFD-DKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 22 ~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~-~~~l~es~aI~~yL~~~~~ 85 (204)
+++++|++|+++|++|+.+.++..+ +.++|.+.||.|++|+|+++ |..++||.+|++||+++||
T Consensus 10 ~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 10 CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 5889999999999999999998754 46789999999999999987 7999999999999999886
No 51
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.65 E-value=4.9e-16 Score=97.85 Aligned_cols=65 Identities=20% Similarity=0.338 Sum_probs=59.6
Q ss_pred CCCCchHHHHHHHHHh--cCCCceEEeecCCCCchhhhhhCCCCCccEEEe-CCeeeechHHHHHHHH
Q 028772 17 LGDCPFSQRALLTLEE--KKVPYKRHLINISDKPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRIIE 81 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~--~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~yL~ 81 (204)
...||+|+|+|++|++ +|++|+.+.++...+.+++.+.||.+++|+|++ +|..++||.+|++||+
T Consensus 6 ~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 6 SPTSPYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CCCCcHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 4789999999999999 899999999987777788999999999999985 7899999999999984
No 52
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.65 E-value=1.2e-15 Score=96.77 Aligned_cols=65 Identities=35% Similarity=0.496 Sum_probs=59.6
Q ss_pred chHHHHHHHHHhcCCCceEEeecCC---CCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCC
Q 028772 21 PFSQRALLTLEEKKVPYKRHLINIS---DKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 21 p~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~ 85 (204)
+++++++++|+++|++|+.+.++.. .+.++|.+.||.+++|+|+++|..++||.+|++||++++|
T Consensus 9 ~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 9 SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 5799999999999999999999875 3567899999999999999999999999999999999875
No 53
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.64 E-value=7.8e-16 Score=96.97 Aligned_cols=66 Identities=24% Similarity=0.404 Sum_probs=58.6
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEe-CCeeeechHHHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRIIE 81 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~yL~ 81 (204)
..+.||+|+|+|++|+++|++|+.+.++... ..+++.+.||.+++|+|++ +|..++||.+|++||+
T Consensus 5 ~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 5 DSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred eCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 3478999999999999999999999988643 4568999999999999985 7789999999999984
No 54
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.64 E-value=1.2e-15 Score=96.08 Aligned_cols=65 Identities=26% Similarity=0.360 Sum_probs=58.6
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
...||++++++++|+++|++|+.+.++... ..++|.+.||.|++|+|+++|..++||.||++||+
T Consensus 6 ~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 6 RRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred cCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 468999999999999999999999887532 45789999999999999999999999999999984
No 55
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=7e-16 Score=115.45 Aligned_cols=184 Identities=18% Similarity=0.296 Sum_probs=130.0
Q ss_pred CCCchHHHHHHHHHhcCC----CceEEeecCCCC------------------------------chhhhhhCCC----CC
Q 028772 18 GDCPFSQRALLTLEEKKV----PYKRHLINISDK------------------------------PQWFMEISPE----GK 59 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi----~~~~~~v~~~~~------------------------------~~~~~~~~p~----g~ 59 (204)
..|||++|+.+.+..+|+ ++..+.--...+ ++-|...+|. -+
T Consensus 44 laCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p~Y~grfT 123 (319)
T KOG2903|consen 44 LACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASPNYTGRFT 123 (319)
T ss_pred ccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCCCCCceEE
Confidence 489999999999999997 343333201110 0012223332 37
Q ss_pred ccEEEe---CCeeeechHHHHHHHHH---------hCCCCCCCCChHHhhhhc---chHHHHHH------hhcCCCCCch
Q 028772 60 VPVVKF---DDKWVADSDVIVRIIEE---------KYPEPSLTNPPEFASLGS---KIFPSFVN------FLKSKDPNDG 118 (204)
Q Consensus 60 vP~L~~---~~~~l~es~aI~~yL~~---------~~~~~~l~~~~~~~~~~~---~l~~~~~~------~~~~~~~~~~ 118 (204)
||+|=| ...+-.||..|++.+.. .++.-+|+|++.+++++. |+++.+.. +...++.-+.
T Consensus 124 VPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~L~~~Ide~N~wvy~~INNGVYk~GFA~~~e~Ye~ 203 (319)
T KOG2903|consen 124 VPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSSLRAQIDETNSWVYDKINNGVYKCGFAEKQEAYEE 203 (319)
T ss_pred EEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHHHHHHHhhhhceecccccCceeeeccccccchHHH
Confidence 999966 34778999999999983 334457888887777754 55554432 2233444566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHH-hccc-CCC-CCccchHHHHHHHHhhc-CcchH
Q 028772 119 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVAL-EHFK-QWT-VPESLAHVHGYTKDGCR-RSMHE 194 (204)
Q Consensus 119 ~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~-~~~~-~~~-~~~~~p~l~~~~~~~~~-~p~~~ 194 (204)
..+.+.+.|+.+|+.|+++-+.|+||+++|.||+.+++.+-++.... .+++ ... +.++||+|..|..++.+ .|+|+
T Consensus 204 ~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~~~~ 283 (319)
T KOG2903|consen 204 EVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIPGFS 283 (319)
T ss_pred HHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhccchh
Confidence 77888899999999999984459999999999999999998887543 3333 222 34699999999999998 99999
Q ss_pred hhHhhhh
Q 028772 195 LVLSYAV 201 (204)
Q Consensus 195 ~~l~~~~ 201 (204)
.+....+
T Consensus 284 ~Ttd~~h 290 (319)
T KOG2903|consen 284 STTDFNH 290 (319)
T ss_pred hccchhH
Confidence 8877654
No 56
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.64 E-value=8.4e-16 Score=96.24 Aligned_cols=66 Identities=26% Similarity=0.455 Sum_probs=56.8
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeC-CeeeechHHHHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFD-DKWVADSDVIVRIIEE 82 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~-~~~l~es~aI~~yL~~ 82 (204)
.+..||||+|+|++|.++|++|+.+.++.... ....+.+|.+++|+|+++ |..++||.+|++||++
T Consensus 5 ~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~~-~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 5 IYEHCPFCVKARMIAGLKNIPVEQIILQNDDE-ATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred ecCCCcHhHHHHHHHHHcCCCeEEEECCCCch-HHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 44789999999999999999999998875432 345678999999999986 8999999999999974
No 57
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.63 E-value=1.8e-15 Score=96.27 Aligned_cols=65 Identities=23% Similarity=0.457 Sum_probs=56.2
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeC----CeeeechHHHHHHHHHhC
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFD----DKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~----~~~l~es~aI~~yL~~~~ 84 (204)
..||||+|++++|.++||+|+.+.++....++ .+.+|.+++|+|+++ |.+++||.+|++||++..
T Consensus 8 ~~~p~c~kv~~~L~~~gi~y~~~~~~~~~~~~--~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 8 KTCPFCCKVRAFLDYHGIPYEVVEVNPVSRKE--IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred CCCHHHHHHHHHHHHCCCceEEEECCchhHHH--HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 78999999999999999999999887643322 467999999999965 789999999999999864
No 58
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.62 E-value=2.7e-15 Score=96.53 Aligned_cols=67 Identities=19% Similarity=0.159 Sum_probs=56.6
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCC----chhhhh-h----CCCCCccEEEeCCeeeechHHHHHHHHHhC
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDK----PQWFME-I----SPEGKVPVVKFDDKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~----~~~~~~-~----~p~g~vP~L~~~~~~l~es~aI~~yL~~~~ 84 (204)
..++.|+++|++|+++||+|+.+.+++.++ .+++.+ . +|.|+||+|+++|.+++||.||++||++++
T Consensus 7 ~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 7 DIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred CCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 567899999999999999999999997542 234432 2 299999999999999999999999999864
No 59
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.62 E-value=1.8e-15 Score=95.13 Aligned_cols=66 Identities=20% Similarity=0.280 Sum_probs=59.6
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
.+..|++|+++|++|+++|++|+.+.++... +.++|.+.||.|++|+|+++|..++||.||++||+
T Consensus 5 ~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 5 SYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred cCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3468899999999999999999999998743 46789999999999999999999999999999984
No 60
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.60 E-value=6.9e-15 Score=92.30 Aligned_cols=71 Identities=23% Similarity=0.315 Sum_probs=61.0
Q ss_pred EEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 4 EICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 4 ~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
+||.+.+ .......||+|++++++|+++||+|+.+.++.. ..||.|++|+|+++|..+.||.+|++||.++
T Consensus 2 ~L~~~~~--~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~-------~~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 2 ELYQWGR--AFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP-------WRSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred EEEEeCC--CCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc-------ccCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 5777744 344557999999999999999999999988753 2789999999999999999999999999864
No 61
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.59 E-value=1.2e-14 Score=92.93 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=55.8
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhC-----CCCCccEEEeCCeeeechHHHHHHHHHhCC
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEIS-----PEGKVPVVKFDDKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~-----p~g~vP~L~~~~~~l~es~aI~~yL~~~~~ 85 (204)
+.|+.|++++++|+++|++|+.+.++.. +++.+.+ |.|++|+|+++|.+++||.||++||+++++
T Consensus 8 ~~~~~~~~v~~~l~~~gi~~e~~~v~~~---~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 8 NGRGRMESIRWLLAAAGVEFEEKFIESA---EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred CCCChHHHHHHHHHHcCCCcEEEEeccH---HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 6788999999999999999999988753 2233333 589999999999999999999999999886
No 62
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.55 E-value=3.3e-14 Score=88.07 Aligned_cols=64 Identities=31% Similarity=0.481 Sum_probs=58.0
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCch-hhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQ-WFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~-~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
..||+|++++++|+++|++|+.+.++..+... ++.+.+|.+++|+|+++|..++||.+|++||+
T Consensus 7 ~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 7 PGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 67999999999999999999999998765433 48889999999999999999999999999984
No 63
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.54 E-value=8.8e-14 Score=96.57 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=70.3
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcc
Q 028772 113 KDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSM 192 (204)
Q Consensus 113 ~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 192 (204)
++..+...+.+.+.+..+|+.|++++++|++|+++|+||+.+++++.++.............+.+|+|++|++++.++|+
T Consensus 27 ~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~ 106 (124)
T cd03184 27 PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPA 106 (124)
T ss_pred cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChH
Confidence 44456778899999999999998755799999999999999999998876543221111123789999999999999999
Q ss_pred hHhhHhhh
Q 028772 193 HELVLSYA 200 (204)
Q Consensus 193 ~~~~l~~~ 200 (204)
+++++...
T Consensus 107 v~~~~~~~ 114 (124)
T cd03184 107 VQAFYTDT 114 (124)
T ss_pred HHHHhCCH
Confidence 99988654
No 64
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=5.4e-14 Score=99.70 Aligned_cols=170 Identities=20% Similarity=0.332 Sum_probs=115.5
Q ss_pred CCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEe-CCeeeechHHHHHHHHHhCCCCCCCCC
Q 028772 14 PDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRIIEEKYPEPSLTNP 92 (204)
Q Consensus 14 ~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~yL~~~~~~~~l~~~ 92 (204)
+++|..||||.|+|++...+|||++.......+. +.-.++-...+||+|+- +|..+.||..|++|+++..+.+ +...
T Consensus 3 LYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe-~Tp~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~-~lt~ 80 (215)
T COG2999 3 LYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDE-ETPIRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP-LLTG 80 (215)
T ss_pred eeEeccChHHHHHHHHhhccCCChhhheeccCcc-cChhhhhcccccceEEccccccchhhhHHHHHHHHhcCch-hhcc
Confidence 3456999999999999999999999887776542 11244555789999985 6799999999999999987754 2333
Q ss_pred hHHhhhhcchH-----------HHHHH-------------hhcC-CC-----------CCchHHHHHHHHHHHHHHHHhh
Q 028772 93 PEFASLGSKIF-----------PSFVN-------------FLKS-KD-----------PNDGTEQALLEELKALDEHLKT 136 (204)
Q Consensus 93 ~~~~~~~~~l~-----------~~~~~-------------~~~~-~~-----------~~~~~~~~~~~~l~~le~~L~~ 136 (204)
..+..+.+|+. +.+.+ ++.. ++ ......+++...|+.++..+..
T Consensus 81 ~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~ 160 (215)
T COG2999 81 KVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVG 160 (215)
T ss_pred CcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcC
Confidence 33333444432 11211 1111 11 1233456777778888888876
Q ss_pred cCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHh
Q 028772 137 HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHEL 195 (204)
Q Consensus 137 ~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 195 (204)
. . -.....|+-|+.+||.|+.+... ++..++ ..+..|..++.+...+.-
T Consensus 161 ~--s-~~n~~l~~ddi~vFplLRnlt~v----~gi~wp---s~v~dy~~~msektqV~L 209 (215)
T COG2999 161 P--S-AVNGELSEDDILVFPLLRNLTLV----AGIQWP---SRVADYRDNMSEKTQVNL 209 (215)
T ss_pred c--c-hhccccchhhhhhhHHhccceec----ccCCCc---HHHHHHHHHHHHhhCcch
Confidence 4 3 23446999999999999987542 243333 579999999998766543
No 65
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.50 E-value=1e-13 Score=86.50 Aligned_cols=72 Identities=21% Similarity=0.281 Sum_probs=58.7
Q ss_pred EeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 5 ICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 5 l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
||.. ..++...++.+++|.|++++|++.|+||+.+.+. .. ...+|.|+||+|+++|.+++||.+|+.||.++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~kv~~~L~elglpye~~~~~--~~----~~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 3 LYQP-YEEEQILLPDNASCLAVQTFLKMCNLPFNVRCRA--NA----EFMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred cccC-CccCeeecCCCCCHHHHHHHHHHcCCCcEEEecC--Cc----cccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 4444 5557778889999999999999999999988322 11 12678899999999999999999999999863
No 66
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.48 E-value=1.9e-13 Score=93.64 Aligned_cols=77 Identities=13% Similarity=0.222 Sum_probs=61.8
Q ss_pred CchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHh
Q 028772 116 NDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHEL 195 (204)
Q Consensus 116 ~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 195 (204)
.+...+.+.+.+..+|++|+++ +|++|+++|+||+++++.+.++...... .. ...++|+|++|++++.++|++++
T Consensus 39 ~~~~~~~i~~~l~~le~~L~~~--~yl~Gd~~tlADi~l~~~l~~~~~~~~~--~~-~~~~~P~L~~w~~r~~~rpa~~~ 113 (115)
T cd03196 39 EEEYRQQAEAFLKDLEARLQQH--SYLLGDKPSLADWAIFPFVRQFAHVDPK--WF-DQSPYPRLRRWLNGFLASPLFSK 113 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHccC--CccCCCCccHHHHHHHHHHHHHHHhhhc--cc-CcccCHHHHHHHHHHHcChHHHh
Confidence 3455678889999999999975 9999999999999999988765432111 11 13789999999999999999998
Q ss_pred hH
Q 028772 196 VL 197 (204)
Q Consensus 196 ~l 197 (204)
++
T Consensus 114 ~~ 115 (115)
T cd03196 114 IM 115 (115)
T ss_pred hC
Confidence 64
No 67
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=4.2e-13 Score=97.39 Aligned_cols=175 Identities=17% Similarity=0.248 Sum_probs=122.1
Q ss_pred EEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 4 EICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 4 ~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
.||... .+++..++...-|..|..+|..+++||.++.-+ +.+| ++|.|++|.|..|.+.+.|=.+|+.+...+
T Consensus 19 tL~qp~-e~eQiLl~d~ascLAVqtfLrMcnLPf~v~~~~----Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak 91 (257)
T KOG3027|consen 19 TLYQPY-EAEQILLPDNASCLAVQTFLRMCNLPFNVRQRA----NAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAK 91 (257)
T ss_pred hhcCcc-cccccccccchhHHHHHHHHHHcCCCceeeecC----Cccc--cCCCCCCceeeecchhhhhhhHHHHHHHHh
Confidence 345443 346777788888999999999999999988544 3334 899999999999999999999999999876
Q ss_pred CCC-CCCCCChHHhhhhcch-------------------------------------HHHHHHhh------------cC-
Q 028772 84 YPE-PSLTNPPEFASLGSKI-------------------------------------FPSFVNFL------------KS- 112 (204)
Q Consensus 84 ~~~-~~l~~~~~~~~~~~~l-------------------------------------~~~~~~~~------------~~- 112 (204)
--. .+....+.++.+..-+ .+.+.++. ..
T Consensus 92 ~~~l~s~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~ 171 (257)
T KOG3027|consen 92 GVTLTSWLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWD 171 (257)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcc
Confidence 421 1223334333221110 00111110 11
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCC---CCccchHHHHHHHHhhc
Q 028772 113 KDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWT---VPESLAHVHGYTKDGCR 189 (204)
Q Consensus 113 ~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~---~~~~~p~l~~~~~~~~~ 189 (204)
....++..+.+.+.++.|+..|+.+ +||.|++||.+|..+|+++..+.... .+... ..+.|++|.++.+|+.+
T Consensus 172 ~~~~DqVie~vdkc~~aLsa~L~~q--~yf~g~~P~elDAlvFGHlytilTt~--Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 172 DKTMDQVIEQVDKCCRALSAQLGSQ--PYFTGDQPTELDALVFGHLYTILTTR--LPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhcCC--CccCCCCccHHHHHHHhhhHHhhhhc--CCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 1122455667778889999999987 99999999999999999999876432 11111 23778999999999876
No 68
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.47 E-value=1.9e-13 Score=97.16 Aligned_cols=81 Identities=17% Similarity=0.306 Sum_probs=64.1
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhc-c-cCCCCCccchHHHHHHHHhhcCcchH
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEH-F-KQWTVPESLAHVHGYTKDGCRRSMHE 194 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~-~-~~~~~~~~~p~l~~~~~~~~~~p~~~ 194 (204)
+...+.+.+.|+.+|++|+++ +|++|+++|+||+++++.+.++...... . .+....+.+|+|.+|++++.++|+++
T Consensus 36 ~~~~~~l~~~l~~LE~~L~~~--~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k 113 (142)
T cd03190 36 DEAVDELFEALDRLEELLSDR--RYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVA 113 (142)
T ss_pred HHHHHHHHHHHHHHHHHHccC--CeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHh
Confidence 345678888999999999865 9999999999999999999876432111 1 01122368999999999999999999
Q ss_pred hhHhh
Q 028772 195 LVLSY 199 (204)
Q Consensus 195 ~~l~~ 199 (204)
+++..
T Consensus 114 ~~~~~ 118 (142)
T cd03190 114 ETTNF 118 (142)
T ss_pred hhcCH
Confidence 98875
No 69
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.45 E-value=4.7e-13 Score=92.40 Aligned_cols=79 Identities=15% Similarity=0.304 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHh
Q 028772 120 EQALLEELKALDEHLKT-HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLS 198 (204)
Q Consensus 120 ~~~~~~~l~~le~~L~~-~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~ 198 (204)
.+.+.+.++.||+.|+. .+++|++| ++|+||++++|++.++........+.++.+++|+|.+|++++.++|++++++.
T Consensus 32 ~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~ 110 (120)
T cd03203 32 SAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQ 110 (120)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcC
Confidence 34567788899999974 23599999 99999999999998775422222344444689999999999999999999876
Q ss_pred h
Q 028772 199 Y 199 (204)
Q Consensus 199 ~ 199 (204)
.
T Consensus 111 ~ 111 (120)
T cd03203 111 D 111 (120)
T ss_pred C
Confidence 3
No 70
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.44 E-value=4.2e-13 Score=93.45 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHHHHhhc-CCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhh
Q 028772 118 GTEQALLEELKALDEHLKTH-GGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELV 196 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~-~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 196 (204)
...+.+.+.|..||++|+++ +++||+|+++|+||+.+++.+.++...... ..+.+|+|.+|++++.++|+++++
T Consensus 35 ~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~~-----~~~~~P~l~~~~~rv~~~p~v~~~ 109 (126)
T cd03210 35 DYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAPG-----CLDAFPLLKAFVERLSARPKLKAY 109 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhChH-----hhhcChHHHHHHHHHHhCcHHHHH
Confidence 33456778899999999875 569999999999999999999887542111 137899999999999999999999
Q ss_pred Hhhh
Q 028772 197 LSYA 200 (204)
Q Consensus 197 l~~~ 200 (204)
++.-
T Consensus 110 ~~~~ 113 (126)
T cd03210 110 LESD 113 (126)
T ss_pred HhCc
Confidence 8754
No 71
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.42 E-value=7.6e-13 Score=93.41 Aligned_cols=73 Identities=15% Similarity=0.240 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHhh
Q 028772 122 ALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSY 199 (204)
Q Consensus 122 ~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~ 199 (204)
.+.+.|+.||++|+.++++|++|+++|+||+.+++.+.++..... .....+|+|.+|++++.++|+++++++.
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~-----~~l~~~P~l~~~~~rv~~~P~vk~~~~~ 115 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDP-----SLLSDFPLLQAFKTRISNLPTIKKFLQP 115 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhch-----hhhccChHHHHHHHHHHcCHHHHHHHhc
Confidence 446788999999986556999999999999999999988753211 1236899999999999999999999974
No 72
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.42 E-value=8.5e-13 Score=89.13 Aligned_cols=73 Identities=23% Similarity=0.363 Sum_probs=59.9
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhh
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELV 196 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 196 (204)
+...+.+.+.|..+|++|+.+ +|++|+++|+|||++++.+.++.. .+.++...+|+|++|++++.+||+++++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~~~~~~~~~~~-----~~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 34 EKARKELRESLLALAPVFAHK--PYFMSEEFSLVDCALAPLLWRLPA-----LGIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--CcccCCCCcHHHHHHHHHHHHHHH-----cCCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 345677888999999999865 999999999999999999865442 1333335789999999999999999876
No 73
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.39 E-value=2.3e-12 Score=85.04 Aligned_cols=68 Identities=25% Similarity=0.404 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCc
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRS 191 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 191 (204)
.....+.+.|+.+|+.|++ ++|++|+++|+||+++++.+.++........ .+++|+|.+|++++.+||
T Consensus 28 ~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~----~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 28 EARAKVPRYLEVLEKRLKG--GPYLVGDKLTIADIALFPMLDWLERLGPDFL----FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT----HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHcC--CCeeeccCCchhHHHHHHHHHHHHHhCCCcc----cccCHHHHHHHHHHHcCC
Confidence 4566778889999999994 5999999999999999999998876533221 278999999999999997
No 74
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.38 E-value=9.7e-13 Score=89.66 Aligned_cols=72 Identities=18% Similarity=0.239 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhH
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVL 197 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l 197 (204)
.....+.+.+..+|+.|+++ +|++|+++|+||+++++.+.++... +.+ .+++|+|.+|++++.++|++++++
T Consensus 43 ~~~~~~~~~l~~le~~l~~~--~~l~G~~~t~aDi~~~~~~~~~~~~-----~~~-~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 43 AARERLAARLAYLDAQLAGG--PYLLGDRFSVADAYLFVVLRWAPGV-----GLD-LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CeeeCCCcchHHHHHHHHHHHHhhc-----CCC-hhhChHHHHHHHHHHhCHHhHhhC
Confidence 34567888899999999854 9999999999999999998876431 222 257899999999999999999864
No 75
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.38 E-value=2.4e-12 Score=86.34 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=62.3
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhh
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELV 196 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 196 (204)
+.....+.+.++.+|++|+++ +|++|+++|+||+++++.+.+.... +. .+.+|+|++|+++++++|+++++
T Consensus 29 ~~~~~~~~~~l~~le~~l~~~--~~l~g~~~t~aDi~~~~~~~~~~~~-----~~--~~~~p~l~~w~~~~~~~p~~~~~ 99 (103)
T cd03207 29 MAGFGSYDDVLAALEQALAKG--PYLLGERFTAADVLVGSPLGWGLQF-----GL--LPERPAFDAYIARITDRPAFQRA 99 (103)
T ss_pred hhhhhhHHHHHHHHHHHHccC--CcccCCccCHHHHHHHHHHHHHHHc-----CC--CCCChHHHHHHHHHHcCHHHHHH
Confidence 445677899999999999976 9999999999999999999886532 21 26789999999999999999998
Q ss_pred Hh
Q 028772 197 LS 198 (204)
Q Consensus 197 l~ 198 (204)
++
T Consensus 100 ~~ 101 (103)
T cd03207 100 AA 101 (103)
T ss_pred hc
Confidence 75
No 76
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.38 E-value=1.9e-12 Score=89.48 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHh
Q 028772 119 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLS 198 (204)
Q Consensus 119 ~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~ 198 (204)
..+.+.+.+..||++|+++ +|++|+++|+||+.+++.+.++..... ...+.+|+|.+|++++.++|+++++++
T Consensus 36 ~~~~~~~~l~~le~~L~~~--~~l~G~~~T~aDi~l~~~~~~~~~~~~-----~~~~~~P~l~~~~~rv~~~p~vk~~~~ 108 (121)
T cd03209 36 YLAKLPDKLKLFSDFLGDR--PWFAGDKITYVDFLLYEALDQHRIFEP-----DCLDAFPNLKDFLERFEALPKISAYMK 108 (121)
T ss_pred HHHHHHHHHHHHHHHhCCC--CCcCCCCccHHHHHHHHHHHHHHHhCc-----cccccChHHHHHHHHHHHCHHHHHHHh
Confidence 3456778899999999865 899999999999999999888764211 123689999999999999999999987
Q ss_pred hh
Q 028772 199 YA 200 (204)
Q Consensus 199 ~~ 200 (204)
.-
T Consensus 109 ~~ 110 (121)
T cd03209 109 SD 110 (121)
T ss_pred cc
Confidence 53
No 77
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.37 E-value=2.2e-12 Score=89.04 Aligned_cols=73 Identities=15% Similarity=0.251 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhHh
Q 028772 120 EQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLS 198 (204)
Q Consensus 120 ~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~ 198 (204)
.+.+.+.|+.+|+.|++++++||+|+++|+||+++++.+.++... +.++ ..+|+|++|++++.++|++++++.
T Consensus 46 ~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~-----~~~~-~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 46 RHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRF-----GVDL-SPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHh-----CCCc-ccCcHHHHHHHHHHhChhHHHhCc
Confidence 356788899999999864458999999999999999998765432 2222 788999999999999999999865
No 78
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.37 E-value=2.3e-12 Score=89.47 Aligned_cols=81 Identities=22% Similarity=0.265 Sum_probs=64.9
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCC--CCccchHHHHHHHHhhcCcchH
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWT--VPESLAHVHGYTKDGCRRSMHE 194 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~p~~~ 194 (204)
+.....+.+.++.||++|+.+ +|++|+++|+||+.+++.+.++..... ..+.+ ..+.+|++.+|+++++++|+++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~ADi~l~~~~~~~~~~~~-~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 110 (126)
T cd03185 34 EKAKEEALEALKVLEEELGGK--PFFGGDTIGYVDIALGSFLGWFRAYEE-VGGVKLLDEEKTPLLAAWAERFLELEAVK 110 (126)
T ss_pred HHHHHHHHHHHHHHHHHhcCC--CCCCCCCcchHHHHHHHHHHHHHHHHH-HcCccccCcccCchHHHHHHHHHhccHHH
Confidence 345678888999999999865 999999999999999999988754321 11222 1367899999999999999999
Q ss_pred hhHhhh
Q 028772 195 LVLSYA 200 (204)
Q Consensus 195 ~~l~~~ 200 (204)
+++...
T Consensus 111 ~~~~~~ 116 (126)
T cd03185 111 EVLPDR 116 (126)
T ss_pred HhCCCH
Confidence 988754
No 79
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.35 E-value=2.5e-12 Score=79.85 Aligned_cols=65 Identities=25% Similarity=0.507 Sum_probs=53.1
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHH
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKD 186 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 186 (204)
++..+.+.+.|+.+|++|+.+ +|++|++||+||+.+++++.++..... +..+.+.+|+|.+|++|
T Consensus 5 ~~~~~~~~~~l~~le~~L~~~--~fl~G~~~s~aD~~l~~~l~~~~~~~~---~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 5 ERARAQLEAALDALEDHLADG--PFLFGDRPSLADIALAPFLWRLRFVGP---DFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS--SBTTBSS--HHHHHHHHHHHHHHHCTH---TCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhC--CCCCCCCCCHHHHHHHHHHHHHHHhCc---CcCccccCHHHHHHHhC
Confidence 356788899999999999987 799999999999999999999886533 22344889999999986
No 80
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.34 E-value=2.1e-12 Score=88.62 Aligned_cols=73 Identities=29% Similarity=0.368 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhH
Q 028772 119 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVL 197 (204)
Q Consensus 119 ~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l 197 (204)
....+.+.++.+|++|+.+ +|++|+++|+||+++++++.++.... . .. ..+++|+|++|++++.++|++++++
T Consensus 46 ~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~l~~~~~~~~~~~--~-~~-~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 46 NEEKLKKVLDVYEARLSKS--KYLAGDSFTLADLSHLPYLQYLMATP--F-AK-LFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHHHHHHHHcccC--cccCCCCccHHHHHHHHHHHHHHHcc--c-hh-hhhcCchHHHHHHHHHhCHHHHhhC
Confidence 4567888999999999865 99999999999999999988765311 1 11 1267899999999999999998864
No 81
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.33 E-value=6e-12 Score=85.08 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHHHHHHhhcC--------CCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhh
Q 028772 117 DGTEQALLEELKALDEHLKTHG--------GPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGC 188 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~--------~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 188 (204)
+.....+...|+.+|++|.++. ++||+|+++|+||+++++.+.++.........+ ....+|+|.+|++++.
T Consensus 28 ~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~-~~~~~P~l~~w~~rv~ 106 (111)
T cd03204 28 KKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYW-GNGKRPNLEAYFERVL 106 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCcccccc-ccccChHHHHHHHHHH
Confidence 4556788899999999998642 269999999999999999998876421100000 1257999999999999
Q ss_pred cCcch
Q 028772 189 RRSMH 193 (204)
Q Consensus 189 ~~p~~ 193 (204)
+||+|
T Consensus 107 aRpsf 111 (111)
T cd03204 107 QRESF 111 (111)
T ss_pred cCCCC
Confidence 99986
No 82
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.32 E-value=5.9e-12 Score=83.86 Aligned_cols=66 Identities=27% Similarity=0.409 Sum_probs=52.9
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhc
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCR 189 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 189 (204)
+...+.+.+.+..++++|+.++++||+|++||+||+++|+.|..+... .+++++|+|.+|++||++
T Consensus 34 ~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~-------~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 34 DFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA-------DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC-------HHTTTCHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc-------ccccccHHHHHHHHhhcC
Confidence 455678899999999999999666999999999999999999765521 111688999999999975
No 83
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.31 E-value=1e-11 Score=86.36 Aligned_cols=76 Identities=21% Similarity=0.327 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhc--CcchHhh
Q 028772 119 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCR--RSMHELV 196 (204)
Q Consensus 119 ~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~~~~~ 196 (204)
..+.+.+.+..+|++|.+ +++|++|+++|+||+.+++.+.+.... +.+..+.+|+|++|++++.+ ||+++++
T Consensus 46 ~~~~~~~~l~~le~~l~~-~~~~l~Gd~~t~ADi~l~~~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~~~p~~~~~ 119 (126)
T cd03183 46 AEENLEESLDLLENYFLK-DKPFLAGDEISIADLSAVCEIMQPEAA-----GYDVFEGRPKLAAWRKRVKEAGNPLFDEA 119 (126)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCcccCCCCCHHHHHHHHHHHHHHhc-----CCcccccCchHHHHHHHHHHhcchhHHHH
Confidence 456778889999998543 348999999999999999988765432 22223789999999999999 9999998
Q ss_pred Hhhh
Q 028772 197 LSYA 200 (204)
Q Consensus 197 l~~~ 200 (204)
++-.
T Consensus 120 ~~~~ 123 (126)
T cd03183 120 HKII 123 (126)
T ss_pred HHHH
Confidence 7543
No 84
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.31 E-value=1e-11 Score=85.40 Aligned_cols=78 Identities=21% Similarity=0.272 Sum_probs=64.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcch
Q 028772 114 DPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMH 193 (204)
Q Consensus 114 ~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 193 (204)
...+...+.+.+.++.+|++|+++ +|++|+++|+||+++++++.++... .+.+. ..+|+|.+|+++++++|++
T Consensus 34 ~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~s~aDi~l~~~~~~~~~~----~~~~~-~~~p~l~~w~~~~~~~p~~ 106 (118)
T cd03177 34 EPPEEKLDKLEEALDFLETFLEGS--DYVAGDQLTIADLSLVATVSTLEAL----LPLDL-SKYPNVRAWLERLKALPPY 106 (118)
T ss_pred CCCHHHHHHHHHHHHHHHHHHccC--CeeCCCCcCHHHHHHHHHHHHHHHh----cCCCh-hhCchHHHHHHHHHcccch
Confidence 344566788999999999999865 8999999999999999999887531 12222 5789999999999999999
Q ss_pred HhhHh
Q 028772 194 ELVLS 198 (204)
Q Consensus 194 ~~~l~ 198 (204)
++...
T Consensus 107 ~~~~~ 111 (118)
T cd03177 107 EEANG 111 (118)
T ss_pred HHHHH
Confidence 98653
No 85
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.31 E-value=3.4e-12 Score=86.93 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhH
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVL 197 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l 197 (204)
.....+.+.++.+|+.|+++ +|++|+++|+||+.+++.+.+..... ....+.+|++.+|++++.++|++++++
T Consensus 40 ~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~l~~~~~~~~~~~-----~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 40 RYTNEAKRLYGVLDKRLAGR--DYLAGDEYSIADIAIFPWVRRLEWIG-----IDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHccC--CcccCCCCCeeeeeHHHHHHHHHhcc-----ccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 34577888999999999854 99999999999999999998865331 112367999999999999999999875
No 86
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=1.5e-11 Score=84.12 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=60.7
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhh
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELV 196 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 196 (204)
+...+.+.+.+..+|..|+. +++||+| ++|+||+.+++.+.++... +.++ . |++.+|.+|+.+||+|+++
T Consensus 41 ~~~~~~~~~~~~~le~~l~~-~~~~l~G-~fSiAD~~l~~~~~~~~~~-----g~~l-~--p~l~ay~~r~~~rPa~~~~ 110 (114)
T cd03195 41 EAAQAAAEKLIAVAEALLPP-GAANLFG-EWCIADTDLALMLNRLVLN-----GDPV-P--ERLRDYARRQWQRPSVQAW 110 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCCcccC-CccHHHHHHHHHHHHHHHc-----CCCC-C--HHHHHHHHHHHCCHHHHHH
Confidence 45677778889999999972 4589999 5999999999999987643 4444 2 9999999999999999999
Q ss_pred Hhh
Q 028772 197 LSY 199 (204)
Q Consensus 197 l~~ 199 (204)
++.
T Consensus 111 ~~~ 113 (114)
T cd03195 111 LAL 113 (114)
T ss_pred Hhc
Confidence 875
No 87
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=2.3e-11 Score=83.12 Aligned_cols=74 Identities=15% Similarity=0.257 Sum_probs=59.1
Q ss_pred CchHHHHHHHHHHHHHHHHhhc-CCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchH
Q 028772 116 NDGTEQALLEELKALDEHLKTH-GGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHE 194 (204)
Q Consensus 116 ~~~~~~~~~~~l~~le~~L~~~-~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 194 (204)
.+...+.+.+.++.+|..+... +++||+|| +|+||+.+++.+.++... +.+. .|+|++|++++.++|+++
T Consensus 39 ~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~-----~~~~---~P~l~~~~~rv~~rPsv~ 109 (114)
T cd03194 39 SEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY-----GLPL---SPAAQAYVDALLAHPAMQ 109 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc-----CCCC---CHHHHHHHHHHHCCHHHH
Confidence 3455667778888888888654 56899999 999999999998876431 2222 299999999999999999
Q ss_pred hhHh
Q 028772 195 LVLS 198 (204)
Q Consensus 195 ~~l~ 198 (204)
++++
T Consensus 110 ~~~~ 113 (114)
T cd03194 110 EWIA 113 (114)
T ss_pred HHHh
Confidence 9986
No 88
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.27 E-value=2e-11 Score=83.65 Aligned_cols=69 Identities=25% Similarity=0.390 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcch
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMH 193 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 193 (204)
.....+.+.|..||++|+++ +|++||++|+||+++++.+.++... +.++...+|+|.+|++++.++|++
T Consensus 49 ~~~~~l~~~l~~le~~L~~~--~~l~gd~~t~aDi~l~~~~~~~~~~-----~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 49 RSKARAADFLAYLDTRLAGS--PYVAGDRFTIADITAFVGLDFAKVV-----KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CcccCCCCCHHHHHHHHHhHHHHhc-----CCCCccccHHHHHHHHHHHhccCC
Confidence 45577888999999999865 8999999999999999999876532 222336899999999999999974
No 89
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.27 E-value=9.8e-12 Score=85.93 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhH
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVL 197 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l 197 (204)
...+.+.+.|+.+|+.|+.+ +|++|+++|+||+.+++.+.++..... +....+.+|++.+|++++.++|++++++
T Consensus 40 ~~~~~~~~~l~~le~~l~~~--~~l~G~~~siaDi~l~~~~~~~~~~~~---~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 114 (123)
T cd03181 40 AALEELDRVLGVLEERLLKR--TYLVGERLTLADIFVAGALLLGFTYVF---DKEWRAKYPNVTRWFNTVVNQPIFKAVF 114 (123)
T ss_pred HHHHHHHHHHHHHHHHHccC--ceeccCCccHHHHHHHHHHHHHHHHHc---CHHHHHhChHHHHHHHHHHcCHHHHHHc
Confidence 34567788899999999966 999999999999999999988643211 1111267899999999999999999998
Q ss_pred hhhhc
Q 028772 198 SYAVF 202 (204)
Q Consensus 198 ~~~~~ 202 (204)
+...+
T Consensus 115 ~~~~~ 119 (123)
T cd03181 115 GEVKL 119 (123)
T ss_pred CCCCc
Confidence 76543
No 90
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=1.9e-11 Score=82.65 Aligned_cols=67 Identities=21% Similarity=0.294 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcch
Q 028772 119 TEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMH 193 (204)
Q Consensus 119 ~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 193 (204)
..+.+.+.|+.+|++|+++ +|++|+++|+||+.+++++...... .. ...++|+|.+|++++.++|++
T Consensus 44 ~~~~~~~~l~~lE~~L~~~--~~l~g~~~t~aDi~~~~~~~~~~~~-----~~-~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 44 SLAAWAKLMAILDAQLAGR--PYLAGDRFTLADIPLGCSAYRWFEL-----PI-ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHhCCC--CcccCCCCCHHHHHHHHHHHHHHHc-----cc-ccccCchHHHHHHHHHhCCCC
Confidence 4568889999999999865 9999999999999999998644321 11 237899999999999999985
No 91
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.26 E-value=6.9e-11 Score=78.21 Aligned_cols=94 Identities=17% Similarity=0.235 Sum_probs=68.0
Q ss_pred HHHHHHhCCCCCCCC--ChHHhhhhcchHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHH
Q 028772 77 VRIIEEKYPEPSLTN--PPEFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSL 154 (204)
Q Consensus 77 ~~yL~~~~~~~~l~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~ 154 (204)
++||++.. ++.| ..+.++++.|+......+.. ...+.+.+.+..+|++|+.+ +|++|+++|+||+.+
T Consensus 1 ~r~~~~~~---~~~~~~~~~~~~vd~~~d~~~~~l~~------~~~~~~~~~l~~le~~L~~~--~fl~Gd~~tiADi~l 69 (96)
T cd03200 1 ARFLYRLL---GPAPNAPNAATNIDSWVDTAIFQLAE------GSSKEKAAVLRALNSALGRS--PWLVGSEFTVADIVS 69 (96)
T ss_pred CchHHHHh---cccCCCchHHHHHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHcCC--CccCCCCCCHHHHHH
Confidence 47888872 2444 34677788877643323221 24566778899999999976 999999999999999
Q ss_pred HhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcC
Q 028772 155 APKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRR 190 (204)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 190 (204)
++.+.+. +.. .+.+|+|.+|++++.++
T Consensus 70 ~~~l~~~--------~~~-~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 70 WCALLQT--------GLA-SAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHc--------ccc-cccChHHHHHHHHHHhC
Confidence 9887642 111 26789999999999863
No 92
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.24 E-value=2.2e-11 Score=81.22 Aligned_cols=69 Identities=16% Similarity=0.162 Sum_probs=56.7
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcch
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMH 193 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 193 (204)
+.....+.+.++.+|++|+++ +|++|+++|+||+.+++++.+... .... .+++|+|.+|++++.++|++
T Consensus 32 ~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~~~~~~~~~~~-----~~~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 32 ETAIARAHRLLRLLEEHLAGR--DWLAGDRPTIADVAVYPYVALAPE-----GGVD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHccC--CccCCCCCCHHHHHHHHHHHHHhc-----cCCC-hhhCcHHHHHHHHHHhCcCC
Confidence 455778899999999999876 899999999999999998865321 1221 26899999999999999985
No 93
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.22 E-value=6e-11 Score=75.66 Aligned_cols=72 Identities=22% Similarity=0.338 Sum_probs=61.3
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
|.++||.+ ..||+|.+++.+|...||+|+.+.++......++...++..++|++..+|..+.++..|.+||
T Consensus 8 ~~V~ly~~---------~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l 78 (79)
T TIGR02190 8 ESVVVFTK---------PGCPFCAKAKATLKEKGYDFEEIPLGNDARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYL 78 (79)
T ss_pred CCEEEEEC---------CCCHhHHHHHHHHHHcCCCcEEEECCCChHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHh
Confidence 45677777 899999999999999999999988765444445666777889999999999999999999998
Q ss_pred H
Q 028772 81 E 81 (204)
Q Consensus 81 ~ 81 (204)
+
T Consensus 79 ~ 79 (79)
T TIGR02190 79 A 79 (79)
T ss_pred C
Confidence 4
No 94
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=99.22 E-value=1.3e-10 Score=72.85 Aligned_cols=71 Identities=20% Similarity=0.165 Sum_probs=58.2
Q ss_pred EEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 4 EICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 4 ~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
+||++-+ .......||+|.|+.+.|+.+|++|+.+..+- ...+|.|++|+|++++..+.+|..|++||.++
T Consensus 2 ~L~~~~~--~~g~ps~sp~clk~~~~Lr~~~~~~~v~~~~n-------~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 2 ELHVWGG--DWGLPSVDPECLAVLAYLKFAGAPLKVVPSNN-------PWRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred EEEEECC--CCCCCcCCHHHHHHHHHHHcCCCCEEEEecCC-------CCCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 6777732 34456788999999999999999998774332 13678999999999999999999999999864
No 95
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.19 E-value=6.1e-11 Score=81.49 Aligned_cols=64 Identities=20% Similarity=0.279 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCc
Q 028772 120 EQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRS 191 (204)
Q Consensus 120 ~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 191 (204)
...+.+.|+.+|++|+++ +|++|+++|+||+++++.+.++... +. ....+|+|.+|+++++++|
T Consensus 56 ~~~~~~~l~~le~~L~~~--~~l~Gd~~t~ADi~l~~~~~~~~~~-----~~-~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 56 NPELKKHLDFLEDRLAKK--GYFVGDKLTAADIMMSFPLEAALAR-----GP-LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred hHHHHHHHHHHHHHHccC--CCCCCCCCCHHHHHHHHHHHHHHHc-----Cc-ccccCchHHHHHHHHhcCC
Confidence 457888899999999865 9999999999999999888876432 11 2378999999999999987
No 96
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.17 E-value=1.2e-10 Score=80.84 Aligned_cols=69 Identities=14% Similarity=0.184 Sum_probs=57.1
Q ss_pred CchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcC
Q 028772 116 NDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRR 190 (204)
Q Consensus 116 ~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 190 (204)
.+...+.+++.|+.+|++|+++ +|+.|+++|+||+.+++++.+..... +.++.+++|+|.+|++|+.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~--~fl~Gd~~t~AD~~l~~~l~~~~~~~----~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQ--PFLGGAAPNYADYIVFGGFQWARIVS----PFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCC--CccCCCCCchhHHHHHHHHHHHHHcC----cccccccCChHHHHHHHHhcC
Confidence 3567788999999999999865 99999999999999999998876421 223347899999999999863
No 97
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.07 E-value=2.2e-10 Score=74.49 Aligned_cols=69 Identities=19% Similarity=0.173 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCC-CCCccchHHHHHHHHhh
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW-TVPESLAHVHGYTKDGC 188 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~ 188 (204)
...+.+.+.++.+|++|+++ +|++|+++|+||+++++.+.++.......... ...+++|+|++|++++.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~--~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDK--KFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCC--CccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 55678889999999999976 99999999999999999998865321000000 01257899999999874
No 98
>PRK10638 glutaredoxin 3; Provisional
Probab=99.05 E-value=1.2e-09 Score=70.31 Aligned_cols=70 Identities=27% Similarity=0.397 Sum_probs=60.0
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
+++|.+ ..||||++++.+|.++|++|+.+.++... ..+++.+.++..++|++..+|..+.+...+..+-.
T Consensus 4 v~ly~~---------~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 4 VEIYTK---------ATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred EEEEEC---------CCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHH
Confidence 667776 89999999999999999999998887554 35678889999999999999999999988877643
No 99
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.02 E-value=1e-09 Score=72.55 Aligned_cols=66 Identities=21% Similarity=0.398 Sum_probs=53.3
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHh
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDG 187 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 187 (204)
+...+.+.+.++.+|++|+.+ +|++|+++|+||+.+++++.++........ +.+.+|+|.+|++++
T Consensus 35 ~~~~~~~~~~~~~l~~~L~~~--~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~---~~~~~p~l~~~~~~~ 100 (100)
T cd00299 35 EEAREELAAALAALEKLLAGR--PYLAGDRFSLADIALAPVLARLDLLGPLLG---LLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHccC--CCCCCCCcCHHHHHHHHHHHHHHHhhhhhh---hhccCccHHHHHHhC
Confidence 345678889999999999876 999999999999999999999875432211 237789999999875
No 100
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=99.01 E-value=2.7e-09 Score=66.66 Aligned_cols=70 Identities=23% Similarity=0.368 Sum_probs=58.1
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
+++|.+ ..||||.+++-+|...|++|+.+.++......++...+...++|++..+|..+.++..|.+||+
T Consensus 3 v~lys~---------~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 3 VSLFTK---------PGCPFCARAKAALQENGISYEEIPLGKDITGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred EEEEEC---------CCCHHHHHHHHHHHHcCCCcEEEECCCChhHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 566666 8999999999999999999998888754433345555677899999999999999999999974
No 101
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.98 E-value=1.5e-09 Score=72.75 Aligned_cols=66 Identities=23% Similarity=0.282 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHh
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDG 187 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 187 (204)
...+.+.+.++.+|++|+..+++|++|+++|+||+++++++.++....+.. ....+|+|.+|++++
T Consensus 39 ~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~----~~~~~p~l~~~~~~~ 104 (104)
T cd03192 39 FLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDPKL----LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCchh----hHHhChhHHHHHHhC
Confidence 345677788999999998733599999999999999999998876432111 136789999999875
No 102
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.96 E-value=9.6e-10 Score=76.40 Aligned_cols=74 Identities=14% Similarity=0.190 Sum_probs=56.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCC-CCccchHHHHHHHHhh
Q 028772 113 KDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWT-VPESLAHVHGYTKDGC 188 (204)
Q Consensus 113 ~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~-~~~~~p~l~~~~~~~~ 188 (204)
....++......+.|+.|+..|+++ +||+||+||.+|+.+++++..+........... ..+++|+|.+|++||.
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~--~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQ--PYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 3445677788899999999999987 999999999999999999988753211000111 1368899999999873
No 103
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.94 E-value=4.5e-09 Score=69.91 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=65.1
Q ss_pred hhhcchHHHHHHhh---------cCC---CCCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHH
Q 028772 97 SLGSKIFPSFVNFL---------KSK---DPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVA 164 (204)
Q Consensus 97 ~~~~~l~~~~~~~~---------~~~---~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~ 164 (204)
++..|+++.+..+- ... .-++...+...+++...+..|.. |++||+|+ .|+||..+++++.++...
T Consensus 10 ~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~-g~~~LFGe-wsIAD~dlA~ml~Rl~~~ 87 (117)
T PF14834_consen 10 QVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLAD-GGPNLFGE-WSIADADLALMLNRLVTY 87 (117)
T ss_dssp HHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT---SSTTSS---HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcc-CCCCcccc-chHHHHHHHHHHHHHHHc
Confidence 45667776655432 221 12467788888999999988876 78999997 999999999999998743
Q ss_pred HhcccCCCCCccchHHHHHHHHhhcCcchHhhHhhh
Q 028772 165 LEHFKQWTVPESLAHVHGYTKDGCRRSMHELVLSYA 200 (204)
Q Consensus 165 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l~~~ 200 (204)
+.+++ +.+..|.++..++|+++++++.+
T Consensus 88 -----gd~vP---~~l~~Ya~~qwqrpsVQ~Wla~~ 115 (117)
T PF14834_consen 88 -----GDPVP---ERLADYAERQWQRPSVQRWLALS 115 (117)
T ss_dssp -----T-------HHHHHHHHHHHT-HHHHHHHHHH
T ss_pred -----CCCCC---HHHHHHHHHHHCCHHHHHHHHHh
Confidence 43344 78999999999999999999865
No 104
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.93 E-value=6.5e-08 Score=75.13 Aligned_cols=174 Identities=20% Similarity=0.208 Sum_probs=110.3
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCC-eeeechHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDD-KWVADSDVIVRIIE 81 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~-~~l~es~aI~~yL~ 81 (204)
.+|+++- |+...-..|+-|.++.+.+..++-|..++..+.. -.+|.|++|+|+++. ..+..-.-|..+|.
T Consensus 2 ~~L~~~~--~~~glptid~~sL~~l~y~kl~~~~l~v~~ssN~-------~~s~sg~LP~l~~~ng~~va~~~~iv~~L~ 72 (313)
T KOG3028|consen 2 LELHIWS--GGYGLPTIDPDSLAALIYLKLAGAPLKVVVSSNP-------WRSPSGKLPYLITDNGTKVAGPVKIVQFLK 72 (313)
T ss_pred ceEEEec--CCCCCCCcChhHHHHHHHHHHhCCCceeEeecCC-------CCCCCCCCCeEEecCCceeccHHHHHHHHH
Confidence 3566662 2333445789999999999999966665544322 257799999999865 99999999999999
Q ss_pred HhCCCCCCCCCh---HHhh-------hhcchHHHHH---------------Hhh--------------------------
Q 028772 82 EKYPEPSLTNPP---EFAS-------LGSKIFPSFV---------------NFL-------------------------- 110 (204)
Q Consensus 82 ~~~~~~~l~~~~---~~~~-------~~~~l~~~~~---------------~~~-------------------------- 110 (204)
....+..+-++. ..+. +..++...+. .++
T Consensus 73 k~~~ky~~d~dl~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l 152 (313)
T KOG3028|consen 73 KNTKKYNLDADLSAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQL 152 (313)
T ss_pred HhcccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHH
Confidence 853322211211 1111 1111111110 000
Q ss_pred -cCCC--CCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCC---CccchHHHHHH
Q 028772 111 -KSKD--PNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTV---PESLAHVHGYT 184 (204)
Q Consensus 111 -~~~~--~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~---~~~~p~l~~~~ 184 (204)
.+.. ..++..+...+.+..+++.|+.+ .|++||+||--|+.++.++..+... ..+...+ ...+++|.+|.
T Consensus 153 ~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~--kffFgd~psslDa~lfs~la~~~~~--~Lp~~~Lq~~l~~~~NL~~~~ 228 (313)
T KOG3028|consen 153 TLGELTEREDQIYKDASKALNLLSTLLGSK--KFFFGDKPSSLDALLFSYLAILLQV--ALPNDSLQVHLLAHKNLVRYV 228 (313)
T ss_pred HhCCchhhHHHHHHHHHHHHHHHHHHhcCc--eEeeCCCCchHHHHHHHHHHHHHhc--cCCchhHHHHHHhcchHHHHH
Confidence 0011 12344556667788999999988 9999999999999999999984321 1111111 24489999999
Q ss_pred HHhhc
Q 028772 185 KDGCR 189 (204)
Q Consensus 185 ~~~~~ 189 (204)
++++.
T Consensus 229 ~~i~s 233 (313)
T KOG3028|consen 229 ERIRS 233 (313)
T ss_pred HHHHH
Confidence 98874
No 105
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.93 E-value=2.2e-09 Score=71.93 Aligned_cols=63 Identities=16% Similarity=0.187 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhh
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGC 188 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 188 (204)
...+.+.+.++.||+.|+.+ +|++|+++|+||+++++.+.++... +.+ ...+|+|.+|+++++
T Consensus 43 ~~~~~~~~~l~~le~~L~~~--~~l~g~~~slaDi~~~~~~~~~~~~-----~~~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 43 FLRERGHAALAVLEAHLAGR--DFLVGDALTIADIALAAYTHVADEG-----GFD-LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHccC--ccccCCCCCHHHHHHHHHHHhcccc-----CCC-hHhCccHHHHHHhhC
Confidence 45677888999999999755 8999999999999999999886421 222 367899999999874
No 106
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.91 E-value=5.6e-09 Score=66.72 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=49.4
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeee
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVA 71 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~ 71 (204)
|.+++|.+ ..||+|.+++-+|.++||+|+.+.++-.....+....++..++|+++.++..+.
T Consensus 1 ~~v~lYt~---------~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~g~~~vPvv~i~~~~~~ 62 (81)
T PRK10329 1 MRITIYTR---------NDCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQGFRQLPVVIAGDLSWS 62 (81)
T ss_pred CEEEEEeC---------CCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCCCcCEEEECCEEEe
Confidence 78888888 999999999999999999999988875432222334568889999999885543
No 107
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.81 E-value=1.7e-08 Score=71.27 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=53.2
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCC-CCCccchHHHHHHHHhhc
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW-TVPESLAHVHGYTKDGCR 189 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~ 189 (204)
+..++.+...++.+-+.+.. +++|+.|++||+||+++++++..+.... +. ++ .++|+|.+|++||.+
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~-~~~FlaGd~ptIADisvyg~l~s~e~~~----~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGK-DRQFHGGSKPNLADLAVYGVLRSVEGHP----AFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcC-CCCccCCCCCCHHHHHHHHHHHHHHHhc----cccch-hhCcCHHHHHHHHHH
Confidence 45677888888887766665 3689999999999999999998876432 22 23 689999999999986
No 108
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.78 E-value=7.3e-09 Score=72.98 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=54.3
Q ss_pred CchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCC-CCCccchHHHHHHHHhhc
Q 028772 116 NDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQW-TVPESLAHVHGYTKDGCR 189 (204)
Q Consensus 116 ~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~ 189 (204)
.++..+...+.++.+++.|+++ +||+||++|.+|+.+++++..+.......... ....++|+|.+|++|+.+
T Consensus 62 ~~~~~~~a~~~l~~l~~~L~~~--~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 62 EAEIYRDAKECLNLLSQRLGES--QFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC--CcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 3456677888999999999976 99999999999999999988765311100000 013678999999999975
No 109
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.77 E-value=4.4e-08 Score=61.31 Aligned_cols=61 Identities=25% Similarity=0.275 Sum_probs=51.7
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeechHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADSDVIVR 78 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~ 78 (204)
+.||+|.+++.+|+++||+|+.+.+.... ..+++.+.++..++|++..+|..+..-.+..+
T Consensus 9 ~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 9 LGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSSVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred CCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHh
Confidence 89999999999999999999988777543 24568888999999999999998887766554
No 110
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.69 E-value=1.4e-07 Score=60.08 Aligned_cols=70 Identities=23% Similarity=0.361 Sum_probs=54.9
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC--Cchhhhhh-CCCCCccEEEeCCeeeechHHHH
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD--KPQWFMEI-SPEGKVPVVKFDDKWVADSDVIV 77 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~--~~~~~~~~-~p~g~vP~L~~~~~~l~es~aI~ 77 (204)
|.+++|.+ +.||||.++.-+|..+|++|+.+.++... ...++... ++..++|++..+++.+.....+-
T Consensus 1 ~~v~iyt~---------~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~ 71 (80)
T COG0695 1 ANVTIYTK---------PGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLD 71 (80)
T ss_pred CCEEEEEC---------CCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEeCcccHH
Confidence 56788888 77999999999999999999999888766 33344444 48899999999998776554444
Q ss_pred HH
Q 028772 78 RI 79 (204)
Q Consensus 78 ~y 79 (204)
++
T Consensus 72 ~~ 73 (80)
T COG0695 72 AL 73 (80)
T ss_pred HH
Confidence 43
No 111
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.68 E-value=8.2e-08 Score=63.62 Aligned_cols=63 Identities=14% Similarity=0.169 Sum_probs=49.2
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHh
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDG 187 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 187 (204)
+.....+.+.|..+|++|+++ +| +++|+||+++++.+.+...... +....+++|+|.+|++++
T Consensus 36 ~~~~~~~~~~l~~le~~L~~~--~~---d~~TlADi~l~~~l~~~~~~~~---~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 36 ERQRGKIERALDALEAELAKL--PL---DPLDLADIAVACALGYLDFRHP---DLDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHhhhhC--CC---CCCCHHHHHHHHHHHHHHhHcc---CcchhhhChHHHHHHHhC
Confidence 345678888999999999865 88 8999999999999988753211 222237899999999885
No 112
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.65 E-value=1.7e-07 Score=57.90 Aligned_cols=62 Identities=19% Similarity=0.296 Sum_probs=52.5
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeechHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRI 79 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~y 79 (204)
..||+|++++.+|..+|++|+.+.++... ...++.+.++..++|++..+|..+.++..|.+.
T Consensus 8 ~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 8 STCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 78999999999999999999877766543 245677788999999999999999999888763
No 113
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.61 E-value=3.8e-07 Score=58.83 Aligned_cols=76 Identities=20% Similarity=0.222 Sum_probs=61.2
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHh-----cCCCceEEeecCCCC-chhhhhhCC--CCCccEEEeCCeeeec
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEE-----KKVPYKRHLINISDK-PQWFMEISP--EGKVPVVKFDDKWVAD 72 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~-----~gi~~~~~~v~~~~~-~~~~~~~~p--~g~vP~L~~~~~~l~e 72 (204)
|.+++|.+ ..||+|.+++-+|.. .|++|+.+.++.... .+++..... ..++|.+..+|..+.+
T Consensus 1 m~v~iy~~---------~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~~~vP~ifi~g~~igg 71 (85)
T PRK11200 1 MFVVIFGR---------PGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPVETVPQIFVDQKHIGG 71 (85)
T ss_pred CEEEEEeC---------CCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCCCcCCEEEECCEEEcC
Confidence 88899988 899999999999999 899999888775321 223444333 2589999999999999
Q ss_pred hHHHHHHHHHhCC
Q 028772 73 SDVIVRIIEEKYP 85 (204)
Q Consensus 73 s~aI~~yL~~~~~ 85 (204)
...|.+++...++
T Consensus 72 ~~~~~~~~~~~~~ 84 (85)
T PRK11200 72 CTDFEAYVKENLG 84 (85)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999987764
No 114
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.57 E-value=3.7e-07 Score=57.25 Aligned_cols=63 Identities=21% Similarity=0.307 Sum_probs=50.3
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCC-CccEEEeCCeeeechHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEG-KVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g-~vP~L~~~~~~l~es~aI~~yL 80 (204)
..||+|.+++-+|...||+|+.+.++... ...++.+..... ++|++..+|..+.+...+.++-
T Consensus 8 ~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 8 PNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred CCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHH
Confidence 88999999999999999999988887542 123344444444 8999999999999999888764
No 115
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.55 E-value=4.4e-07 Score=56.36 Aligned_cols=63 Identities=16% Similarity=0.283 Sum_probs=49.5
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhCCCCCccEEEeCCeee--echHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDK-PQWFMEISPEGKVPVVKFDDKWV--ADSDVIVRII 80 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~p~g~vP~L~~~~~~l--~es~aI~~yL 80 (204)
.+||+|++++.+|.+.|++|..+.++-... .+++.+.++...+|+++.+|..+ .++.+|-++|
T Consensus 8 ~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 8 PWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 899999999999999999998876654321 24567778899999999988777 5666666654
No 116
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=98.48 E-value=1.4e-06 Score=54.14 Aligned_cols=60 Identities=22% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCCCCCCchHHHHHHHHHhcCCC---ceEEeecCCCCchhhhhhCCCCCccEEEe-CCeeeechHHHHHHH
Q 028772 14 PDILGDCPFSQRALLTLEEKKVP---YKRHLINISDKPQWFMEISPEGKVPVVKF-DDKWVADSDVIVRII 80 (204)
Q Consensus 14 ~~~~~~sp~~~~v~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~p~g~vP~L~~-~~~~l~es~aI~~yL 80 (204)
...-..+|-|.++.+.|+.++.| |+.+..+- -.++|.|++|+|.+ +++.+.+-..|++||
T Consensus 8 ~glpsid~ecLa~~~yl~~~~~~~~~~~vv~s~n-------~~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 8 WGLPSIDPECLAVIAYLKFAGAPEQQFKVVPSNN-------PWLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred CCCCccCHHHHHHHHHHHhCCCCCceEEEEEcCC-------CCcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 44556899999999999999999 76664442 13789999999999 889999999999997
No 117
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.47 E-value=6.4e-07 Score=55.49 Aligned_cols=56 Identities=20% Similarity=0.392 Sum_probs=46.5
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeech
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADS 73 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es 73 (204)
.+||+|.+++.+|.+.|++|+.+.++... ..+++.+.+|.+++|+++.+|..+.+.
T Consensus 8 ~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 8 PDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred CCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCCcccCEEEECCEEEecC
Confidence 78999999999999999999988877543 234677888999999999988766553
No 118
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.47 E-value=9.7e-07 Score=56.01 Aligned_cols=65 Identities=23% Similarity=0.287 Sum_probs=54.2
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
..||+|.+++-+|+..|++|+.+.++... ...++.+.+....+|++..+|..+.+..++..+-.+
T Consensus 7 ~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 7 PYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 89999999999999999999999887543 234566667788999999999999988888776543
No 119
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.36 E-value=1.1e-06 Score=54.69 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=40.2
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCe
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDK 68 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~ 68 (204)
...||+|.+++-+|.+.|++|+.+.++-.....+.+...+..++|+++.+|.
T Consensus 6 ~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 6 KNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCcccCEEEECCC
Confidence 3899999999999999999999988775432223334456779999998653
No 120
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.32 E-value=5.1e-06 Score=53.65 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=51.3
Q ss_pred CCCchHHHHHHHHHhcC-----CCceEEeecCCC-CchhhhhhCCC--CCccEEEeCCeeeechHHHHHHHHHhCC
Q 028772 18 GDCPFSQRALLTLEEKK-----VPYKRHLINISD-KPQWFMEISPE--GKVPVVKFDDKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~g-----i~~~~~~v~~~~-~~~~~~~~~p~--g~vP~L~~~~~~l~es~aI~~yL~~~~~ 85 (204)
..||||.+++-+|...+ ++|+.+.++... ...++...... .++|++..+|..+.++..|..++.+.+.
T Consensus 8 ~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 8 PGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred CCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 89999999999999985 456665555322 12334444433 6899999999999999999999887654
No 121
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.30 E-value=8.3e-06 Score=54.12 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=50.9
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCch----hhhhhCCCCCccEEEeCCeeeechHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQ----WFMEISPEGKVPVVKFDDKWVADSDVIVRI 79 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~----~~~~~~p~g~vP~L~~~~~~l~es~aI~~y 79 (204)
++||||.+++-+|...|++|+.+.++...... .+.+.+...++|.+..+|..+.+...+...
T Consensus 16 ~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l 81 (99)
T TIGR02189 16 SSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMAL 81 (99)
T ss_pred CCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHH
Confidence 89999999999999999999998888544212 344556778999999999999888877764
No 122
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.26 E-value=1.8e-06 Score=51.75 Aligned_cols=53 Identities=28% Similarity=0.509 Sum_probs=44.2
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeee
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWV 70 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l 70 (204)
..||+|.+++-+|...|++|+.+.++... ..+++.+.+...++|.+..||..+
T Consensus 7 ~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 7 PGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp TTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred CCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCCCccCEEEECCEEC
Confidence 89999999999999999999999888763 344566666788999999988654
No 123
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.22 E-value=6.8e-06 Score=51.54 Aligned_cols=63 Identities=17% Similarity=0.334 Sum_probs=46.2
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhC-CCCCccEEEe-CCeeeechH--HHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDK-PQWFMEIS-PEGKVPVVKF-DDKWVADSD--VIVRII 80 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~-p~g~vP~L~~-~~~~l~es~--aI~~yL 80 (204)
.+||+|++++.+|.+.|++|+.+.++-... ..++.+.+ +...+|+++. +|..+.++. .+..+|
T Consensus 8 ~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 8 TWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGNMTVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred CCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCCceeCEEEECCCeEecCCCHHHHHHHh
Confidence 899999999999999999998776654332 34556676 8899999964 566665543 344443
No 124
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.21 E-value=1.8e-05 Score=50.34 Aligned_cols=65 Identities=20% Similarity=0.355 Sum_probs=54.8
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCc----hhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKP----QWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~----~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
..||+|.+++-+|...+++|+.+.++..... ..+.+.+...++|.+..+|..+.+...|.++..+
T Consensus 8 ~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 8 SYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 8999999999999999999999988876542 2344566677999999999999999999988664
No 125
>PHA03050 glutaredoxin; Provisional
Probab=98.21 E-value=1.4e-05 Score=53.81 Aligned_cols=61 Identities=21% Similarity=0.320 Sum_probs=50.1
Q ss_pred CCCchHHHHHHHHHhcCC---CceEEeecCCCC----chhhhhhCCCCCccEEEeCCeeeechHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKV---PYKRHLINISDK----PQWFMEISPEGKVPVVKFDDKWVADSDVIVR 78 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~----~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~ 78 (204)
++||||.+++-+|...|+ +|+.+.++-... ..++.+.+...+||.+..+|..+.....+..
T Consensus 21 ~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 21 FTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred CCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 799999999999999999 788887774222 2356677777899999999999988877766
No 126
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=98.16 E-value=1.9e-05 Score=52.15 Aligned_cols=65 Identities=23% Similarity=0.310 Sum_probs=50.2
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
..+.||||.+++-+|...||+|+.+.++-.. ...++.+.+...++|.+..+|..+.....+....
T Consensus 23 ~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 23 QFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred CCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHHH
Confidence 3578999999999999999999987664221 1224445666779999999999988888877643
No 127
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=98.09 E-value=4.1e-05 Score=48.81 Aligned_cols=65 Identities=17% Similarity=0.375 Sum_probs=53.2
Q ss_pred CCCchHHHHHHHHHhcCCC--ceEEeecCCCCch----hhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVP--YKRHLINISDKPQ----WFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~--~~~~~v~~~~~~~----~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
.+||+|.+++-+|...+++ |+.+.++..+... .+.+.....++|.+..+|..+.++..+.++..+
T Consensus 7 ~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 7 SYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 8999999999999999999 8888888764332 244455667899999999999999998887653
No 128
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=98.07 E-value=3.8e-05 Score=50.02 Aligned_cols=64 Identities=19% Similarity=0.243 Sum_probs=51.1
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDK-PQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
.+.||||.+++-+|...|++|+.+.+..... ..++.+.+...++|.+..+|..+.+...+...-
T Consensus 20 ~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 20 EPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHH
Confidence 3689999999999999999999998764321 234455666779999999999999988887743
No 129
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.77 E-value=0.00023 Score=49.06 Aligned_cols=69 Identities=20% Similarity=0.202 Sum_probs=53.3
Q ss_pred CCchHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcch
Q 028772 115 PNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMH 193 (204)
Q Consensus 115 ~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 193 (204)
...+..+.++..|+.++..+.. +-.+++++|+.|+.+||.|+.+... ++..++ |++.+|++++.+...+
T Consensus 57 ~t~~~i~~l~~~L~~l~~ll~~---~~~~n~~ls~DDi~lFp~LR~Lt~v----kgi~~P---~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 57 NTPQYIAALNALLEELDPLILS---SEAVNGQLSTDDIILFPILRNLTLV----KGLVFP---PKVKAYLERMSALTKV 125 (128)
T ss_pred ccHHHHHHHHHHHHHHHHHHcC---ccccCCcCCHHHHHHHHHHhhhhhh----cCCCCC---HHHHHHHHHHHHHhCC
Confidence 3446678888999999999954 2235668999999999999998753 344444 8999999999987654
No 130
>PRK10824 glutaredoxin-4; Provisional
Probab=97.75 E-value=0.00026 Score=48.12 Aligned_cols=64 Identities=17% Similarity=0.210 Sum_probs=50.9
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISDK-PQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
.+.||||.++.-+|...|++|..+.++-... ...+...+...++|-+..+|..+.....+....
T Consensus 27 ~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l~ 91 (115)
T PRK10824 27 LPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMY 91 (115)
T ss_pred CCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHH
Confidence 4699999999999999999999877664321 234555666789999999999999988877753
No 131
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.55 E-value=0.00044 Score=49.15 Aligned_cols=74 Identities=12% Similarity=0.196 Sum_probs=54.5
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCC----CCCccEEEeCCeeeechHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISP----EGKVPVVKFDDKWVADSDVIV 77 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p----~g~vP~L~~~~~~l~es~aI~ 77 (204)
++||..-- ..+..++|+|.+++-+|+..||+|+.+.+++.. ..+++.+... ..++|.+..+|..|.....+.
T Consensus 2 VvlYttsl---~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~ 78 (147)
T cd03031 2 VVLYTTSL---RGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVL 78 (147)
T ss_pred EEEEEcCC---cCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHH
Confidence 56777711 123348899999999999999999988887643 1334444433 368999999999999888877
Q ss_pred HH
Q 028772 78 RI 79 (204)
Q Consensus 78 ~y 79 (204)
+.
T Consensus 79 ~L 80 (147)
T cd03031 79 RL 80 (147)
T ss_pred HH
Confidence 74
No 132
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.53 E-value=0.00042 Score=57.67 Aligned_cols=68 Identities=22% Similarity=0.327 Sum_probs=51.9
Q ss_pred ceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhh-h--------hCCCCCccEEEeCCeeeec
Q 028772 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFM-E--------ISPEGKVPVVKFDDKWVAD 72 (204)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~-~--------~~p~g~vP~L~~~~~~l~e 72 (204)
++++|.+ +.||||.++.-+|...||+|+.+.++-.....++. + .+...++|.+..+|..+.+
T Consensus 3 ~V~vys~---------~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igG 73 (410)
T PRK12759 3 EVRIYTK---------TNCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGG 73 (410)
T ss_pred cEEEEeC---------CCCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCCCccCeEEECCEEEeC
Confidence 4677777 99999999999999999999988887322211222 1 2456789999999988888
Q ss_pred hHHHHH
Q 028772 73 SDVIVR 78 (204)
Q Consensus 73 s~aI~~ 78 (204)
-..+..
T Consensus 74 f~~l~~ 79 (410)
T PRK12759 74 YDNLMA 79 (410)
T ss_pred chHHHH
Confidence 877765
No 133
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.40 E-value=0.00039 Score=48.32 Aligned_cols=68 Identities=21% Similarity=0.253 Sum_probs=47.1
Q ss_pred chHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchH
Q 028772 117 DGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHE 194 (204)
Q Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 194 (204)
++..+.++..|..+|..+.. +.-++.++|+.|+.+||.|+.+.. .++..++ |++.+|++++.+...+.
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~---~~~~n~~LS~dDi~lFp~LR~Lti----vkgi~~P---~~V~~Y~~~~s~~t~V~ 125 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLAS---PNAVNGELSIDDIILFPILRSLTI----VKGIQWP---PKVRAYMDRMSKATGVP 125 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SC---TTBTTSS--HHHHHHHHHHHHHCT----CTTS------HHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHHHHhcc---ccccCCCCCHHHHHHHHHHhhhhh----ccCCcCC---HHHHHHHHHHHHHcCCC
Confidence 45567888889999988885 334444899999999999998764 3455444 89999999999876554
No 134
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.0025 Score=42.46 Aligned_cols=62 Identities=18% Similarity=0.319 Sum_probs=51.7
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCch----hhhhhCCCCCccEEEeCCeeeechHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQ----WFMEISPEGKVPVVKFDDKWVADSDVIVRI 79 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~----~~~~~~p~g~vP~L~~~~~~l~es~aI~~y 79 (204)
.+||||+++.-+|...|+++.++.+|-.+... .+.+..-..++|.+..+|..+.....+..+
T Consensus 22 s~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~l 87 (104)
T KOG1752|consen 22 SSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMAL 87 (104)
T ss_pred CcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHH
Confidence 79999999999999999999999999765332 233455567999999999999999888876
No 135
>PTZ00062 glutaredoxin; Provisional
Probab=97.19 E-value=0.0025 Score=47.84 Aligned_cols=64 Identities=17% Similarity=0.181 Sum_probs=49.6
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeechHHHHHH
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRI 79 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~y 79 (204)
.-+.||||.++.-+|...||+|+...++-.. ....+.+.+...++|.+..+|..+.+...+.+.
T Consensus 124 ~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~l 188 (204)
T PTZ00062 124 TFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKEL 188 (204)
T ss_pred CCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 3468999999999999999999877666332 123344566667999999999999888777763
No 136
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=96.86 E-value=0.00077 Score=56.61 Aligned_cols=117 Identities=16% Similarity=0.148 Sum_probs=74.4
Q ss_pred CCeeeechHHHHHHHHHhCC-CCCCCCC-hHHhhhhcchHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCccc
Q 028772 66 DDKWVADSDVIVRIIEEKYP-EPSLTNP-PEFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIA 143 (204)
Q Consensus 66 ~~~~l~es~aI~~yL~~~~~-~~~l~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~ 143 (204)
++..+..+..+..|.+.... .+.+++. -++.+++.|+.-... .....+...+..++..|... .||+
T Consensus 44 d~~~l~~a~~~~~~~~~~~~~~~~lf~~~~d~~~vd~w~~~s~~----------~~~~~~s~~~~~ld~~l~~~--t~lv 111 (712)
T KOG1147|consen 44 DGRKLNGATEPVVYSAALAKADPKLFGNNIDRSQVDHWVSFSST----------FSFDEISSSLSELDKFLVLR--TFLV 111 (712)
T ss_pred ccccccCCccchhhhhhhcccCHhHcCCcccHHHHHHHHHHhhh----------cchHHHHHHHHHHHhhhhHH--HHhh
Confidence 34555556666666553222 1234443 466677776653322 22456778899999999988 9999
Q ss_pred CCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchHhhH
Q 028772 144 GEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHELVL 197 (204)
Q Consensus 144 G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~l 197 (204)
|.+.|+||+++|+.+..-....+... ..+.+-++.+|++-....++.++++
T Consensus 112 g~sls~Ad~aiw~~l~~n~~~~~~lk---~~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 112 GNSLSIADFAIWGALHSNGMRQEQLK---AKKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred ccchhHHHHHHHHHHhcccchHHHHH---hhCCchhhhhhcCcHhHHHHHHHHH
Confidence 99999999999999987433222222 1256678999998444444444444
No 137
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.41 E-value=0.0074 Score=42.09 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=29.5
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCC
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINIS 45 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~ 45 (204)
+++|.. +.||+|.+++-+|...||+|+.+.+.-.
T Consensus 2 i~iY~~---------~~C~~C~ka~~~L~~~gi~~~~idi~~~ 35 (131)
T PRK01655 2 VTLFTS---------PSCTSCRKAKAWLEEHDIPFTERNIFSS 35 (131)
T ss_pred EEEEeC---------CCChHHHHHHHHHHHcCCCcEEeeccCC
Confidence 677766 9999999999999999999999877543
No 138
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=96.36 E-value=0.03 Score=36.61 Aligned_cols=75 Identities=19% Similarity=0.229 Sum_probs=54.1
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcC-CCceEEeecCCC-CchhhhhhCCCCCccEEEeCCeeeechHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKK-VPYKRHLINISD-KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRII 80 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~g-i~~~~~~v~~~~-~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL 80 (204)
+.||+|.++ ..+.|-||.++--+|..+| ++|..+.|-..+ -.....+.+-..+.|-|-.+|..+..+..|.+..
T Consensus 17 VvLFMKGtp----~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em~ 92 (105)
T COG0278 17 VVLFMKGTP----EFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREMY 92 (105)
T ss_pred eEEEecCCC----CCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHHH
Confidence 578999555 7889999999999999999 455544433321 1222344455679999999999999988887764
Q ss_pred H
Q 028772 81 E 81 (204)
Q Consensus 81 ~ 81 (204)
.
T Consensus 93 q 93 (105)
T COG0278 93 Q 93 (105)
T ss_pred H
Confidence 4
No 139
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.17 E-value=0.027 Score=34.00 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=34.3
Q ss_pred CCCchHHHHHHHHHhc-----CCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeee
Q 028772 18 GDCPFSQRALLTLEEK-----KVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVA 71 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~ 71 (204)
.+||+|.++.-+|++. ++++. .+|..+. ++..+......+|.+..+|..++
T Consensus 9 ~~C~~C~~~~~~l~~l~~~~~~i~~~--~id~~~~-~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 9 PTCPYCPDAVQAANRIAALNPNISAE--MIDAAEF-PDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred CCCCCcHHHHHHHHHHHHhCCceEEE--EEEcccC-HhHHHHcCCcccCEEEECCEEEE
Confidence 7899999999998875 34444 4444332 33444444567999998886654
No 140
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=95.94 E-value=0.019 Score=39.01 Aligned_cols=33 Identities=18% Similarity=0.406 Sum_probs=28.5
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecC
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~ 44 (204)
+++|.. ..|++|.+++-+|+..||+|+.+.+.-
T Consensus 2 i~iY~~---------~~C~~c~ka~~~L~~~gi~~~~idi~~ 34 (115)
T cd03032 2 IKLYTS---------PSCSSCRKAKQWLEEHQIPFEERNLFK 34 (115)
T ss_pred EEEEeC---------CCCHHHHHHHHHHHHCCCceEEEecCC
Confidence 566665 899999999999999999999887754
No 141
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=95.90 E-value=0.017 Score=39.05 Aligned_cols=30 Identities=23% Similarity=0.222 Sum_probs=26.3
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
.+.||+|.+++-+|+.+|++|+.+.+.-..
T Consensus 6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~~~ 35 (111)
T cd03036 6 YPKCSTCRKAKKWLDEHGVDYTAIDIVEEP 35 (111)
T ss_pred CCCCHHHHHHHHHHHHcCCceEEecccCCc
Confidence 389999999999999999999998776543
No 142
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.82 E-value=0.042 Score=35.78 Aligned_cols=57 Identities=25% Similarity=0.391 Sum_probs=44.2
Q ss_pred hHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhCC----CCCccEEEeCCeeeechHHHHH
Q 028772 22 FSQRALLTLEEKKVPYKRHLINISDK-PQWFMEISP----EGKVPVVKFDDKWVADSDVIVR 78 (204)
Q Consensus 22 ~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~p----~g~vP~L~~~~~~l~es~aI~~ 78 (204)
.|++++.+|..+||+|+.+.++.... ..++.+..+ ..++|-+..++..+.+...+..
T Consensus 18 ~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 18 RQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred HHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 47889999999999999999987542 334555443 4789999999999888866665
No 143
>PRK12559 transcriptional regulator Spx; Provisional
Probab=95.77 E-value=0.027 Score=39.23 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=29.9
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
+++|.. +.|+.|.+++-+|...||+|+.+.+.-..
T Consensus 2 i~iY~~---------~~C~~crkA~~~L~~~gi~~~~~di~~~~ 36 (131)
T PRK12559 2 VVLYTT---------ASCASCRKAKAWLEENQIDYTEKNIVSNS 36 (131)
T ss_pred EEEEeC---------CCChHHHHHHHHHHHcCCCeEEEEeeCCc
Confidence 566666 89999999999999999999998776544
No 144
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=95.71 E-value=0.027 Score=37.53 Aligned_cols=28 Identities=29% Similarity=0.269 Sum_probs=25.4
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecC
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINI 44 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~ 44 (204)
.+.||+|.+++-+|+.+||+|+.+.+.-
T Consensus 6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (105)
T cd02977 6 NPNCSTSRKALAWLEEHGIEYEFIDYLK 33 (105)
T ss_pred CCCCHHHHHHHHHHHHcCCCcEEEeecc
Confidence 3899999999999999999999887764
No 145
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=95.70 E-value=0.03 Score=39.08 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=26.1
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
+.|+.|++++-.|...||+|+.+.+.-..
T Consensus 8 ~~C~~crkA~~~L~~~~i~~~~~d~~~~~ 36 (132)
T PRK13344 8 SSCTSCKKAKTWLNAHQLSYKEQNLGKEP 36 (132)
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEECCCCC
Confidence 89999999999999999999999876543
No 146
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=95.36 E-value=0.13 Score=32.50 Aligned_cols=55 Identities=24% Similarity=0.510 Sum_probs=41.0
Q ss_pred ceEEeeeccCCCCCCCCCCchHHHHHHHHHhcC--CCceEEeecCCCCchhhhhhCCCCCccEEEeCC
Q 028772 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKK--VPYKRHLINISDKPQWFMEISPEGKVPVVKFDD 67 (204)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~g--i~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~ 67 (204)
+++||.+ ..|+.|..+.-.|.... .+++...+|+.+.+.++.+.. -.+|+|..++
T Consensus 1 ~l~l~~k---------~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~l~~~Y~--~~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTK---------PGCHLCDEAKEILEEVAAEFPFELEEVDIDEDPELFEKYG--YRIPVLHIDG 57 (81)
T ss_dssp -EEEEE----------SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTTHHHHHHSC--TSTSEEEETT
T ss_pred CEEEEcC---------CCCChHHHHHHHHHHHHhhcCceEEEEECCCCHHHHHHhc--CCCCEEEEcC
Confidence 4677777 89999999999999765 467888888876555444433 4899999877
No 147
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=95.14 E-value=0.14 Score=34.25 Aligned_cols=70 Identities=17% Similarity=0.250 Sum_probs=50.2
Q ss_pred CCCchHHHHHHHHHhcC---CCceEEeecCCCCchhhhhhC-C-CCCccEEEeCC--------------eeeechHHHHH
Q 028772 18 GDCPFSQRALLTLEEKK---VPYKRHLINISDKPQWFMEIS-P-EGKVPVVKFDD--------------KWVADSDVIVR 78 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~g---i~~~~~~v~~~~~~~~~~~~~-p-~g~vP~L~~~~--------------~~l~es~aI~~ 78 (204)
.+||.|..+.=+|...= -..+++.|+......+..+.- . ...+|+|+-++ ..|.++..|++
T Consensus 22 f~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~ 101 (112)
T PF11287_consen 22 FYCPHCAAIEGLLASFPDLRERLDVRRVDFPRPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILR 101 (112)
T ss_pred EECCchHHHHhHHhhChhhhhcccEEEeCCCCchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHH
Confidence 58999999888876542 246667777766544444432 2 57899998521 47999999999
Q ss_pred HHHHhCCCC
Q 028772 79 IIEEKYPEP 87 (204)
Q Consensus 79 yL~~~~~~~ 87 (204)
||.++|+.+
T Consensus 102 ~La~r~g~p 110 (112)
T PF11287_consen 102 YLAERHGFP 110 (112)
T ss_pred HHHHHcCCC
Confidence 999999853
No 148
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=94.56 E-value=0.057 Score=36.76 Aligned_cols=28 Identities=21% Similarity=0.218 Sum_probs=25.0
Q ss_pred CCCCchHHHHHHHHHhcCCCceEEeecC
Q 028772 17 LGDCPFSQRALLTLEEKKVPYKRHLINI 44 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~ 44 (204)
...||+|++++-+|.+.||+|+.+.+.-
T Consensus 6 ~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (117)
T TIGR01617 6 SPNCTTCKKARRWLEANGIEYQFIDIGE 33 (117)
T ss_pred CCCCHHHHHHHHHHHHcCCceEEEecCC
Confidence 4899999999999999999999887653
No 149
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=94.32 E-value=0.35 Score=30.08 Aligned_cols=50 Identities=18% Similarity=0.140 Sum_probs=35.3
Q ss_pred CCCchHHHH----HHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeee
Q 028772 18 GDCPFSQRA----LLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVA 71 (204)
Q Consensus 18 ~~sp~~~~v----~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~ 71 (204)
.+||+|..+ .-++.+.|++++.+.++- .++..+ .-...+|++..+|..+.
T Consensus 8 ~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~---~~~a~~-~~v~~vPti~i~G~~~~ 61 (76)
T TIGR00412 8 TGCANCQMTEKNVKKAVEELGIDAEFEKVTD---MNEILE-AGVTATPGVAVDGELVI 61 (76)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC---HHHHHH-cCCCcCCEEEECCEEEE
Confidence 589999998 567888899888887771 122222 33568999988875543
No 150
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=93.68 E-value=0.29 Score=30.40 Aligned_cols=51 Identities=20% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCchHHHHHH----HHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeec
Q 028772 18 GDCPFSQRALL----TLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVAD 72 (204)
Q Consensus 18 ~~sp~~~~v~~----~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~e 72 (204)
..||+|.++.- ++...|+.++.+. .. ..++. ....-..+|+++.||...+.
T Consensus 8 ~~C~~C~~~~~~~~~~~~~~~i~~ei~~--~~-~~~~~-~~ygv~~vPalvIng~~~~~ 62 (76)
T PF13192_consen 8 PGCPYCPELVQLLKEAAEELGIEVEIID--IE-DFEEI-EKYGVMSVPALVINGKVVFV 62 (76)
T ss_dssp SSCTTHHHHHHHHHHHHHHTTEEEEEEE--TT-THHHH-HHTT-SSSSEEEETTEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHhcCCeEEEEE--cc-CHHHH-HHcCCCCCCEEEECCEEEEE
Confidence 45999987666 4455676665444 32 33333 44556789999998866443
No 151
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=93.52 E-value=0.48 Score=31.25 Aligned_cols=75 Identities=23% Similarity=0.402 Sum_probs=42.1
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhC---------CCCCccEEEeCCeee
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDK-PQWFMEIS---------PEGKVPVVKFDDKWV 70 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~---------p~g~vP~L~~~~~~l 70 (204)
|.+.+|+--..|... .-...+++..+|+.++|+|+.+.+...+. ..++.+.. +....|-+..++.-+
T Consensus 1 m~I~vy~ss~sg~~~---ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~ 77 (99)
T PF04908_consen 1 MVIKVYISSISGSRE---IKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYC 77 (99)
T ss_dssp -SEEEEE-SS-SSHH---HHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEE
T ss_pred CEEEEEEecccCCHH---HHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEE
Confidence 889999873322211 11357899999999999999888777442 33444443 223446788788776
Q ss_pred echHHHHH
Q 028772 71 ADSDVIVR 78 (204)
Q Consensus 71 ~es~aI~~ 78 (204)
.+-..+-+
T Consensus 78 Gdye~f~e 85 (99)
T PF04908_consen 78 GDYEDFEE 85 (99)
T ss_dssp EEHHHHHH
T ss_pred eeHHHHHH
Confidence 66555443
No 152
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=93.46 E-value=0.27 Score=33.56 Aligned_cols=37 Identities=24% Similarity=0.278 Sum_probs=30.8
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
|++++|.. +.|.=|++++-.|+..||+|+.+.+--..
T Consensus 1 ~~itiy~~---------p~C~t~rka~~~L~~~gi~~~~~~y~~~~ 37 (117)
T COG1393 1 MMITIYGN---------PNCSTCRKALAWLEEHGIEYTFIDYLKTP 37 (117)
T ss_pred CeEEEEeC---------CCChHHHHHHHHHHHcCCCcEEEEeecCC
Confidence 66777766 88999999999999999999988666443
No 153
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=93.34 E-value=0.22 Score=33.25 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=26.7
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
+.+.|+.|++++-.|.+.|++|+.+.+.-..
T Consensus 5 ~~~~C~~crka~~~L~~~~i~~~~~di~~~p 35 (105)
T cd03035 5 GIKNCDTVKKARKWLEARGVAYTFHDYRKDG 35 (105)
T ss_pred eCCCCHHHHHHHHHHHHcCCCeEEEecccCC
Confidence 4589999999999999999999988776443
No 154
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=92.95 E-value=0.29 Score=33.15 Aligned_cols=31 Identities=13% Similarity=0.003 Sum_probs=26.4
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
+.+.|+.|.+++-.|+++|++|+.+.+.-..
T Consensus 6 ~~p~C~~crkA~~~L~~~gi~~~~~d~~~~p 36 (113)
T cd03033 6 EKPGCANNARQKALLEAAGHEVEVRDLLTEP 36 (113)
T ss_pred ECCCCHHHHHHHHHHHHcCCCcEEeehhcCC
Confidence 3489999999999999999999988766433
No 155
>PRK10026 arsenate reductase; Provisional
Probab=91.46 E-value=0.63 Score=32.86 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=29.7
Q ss_pred ceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
++++|.. +.|+=|++++-.|+++|++|+++.+--..
T Consensus 3 ~i~iY~~---------p~Cst~RKA~~wL~~~gi~~~~~d~~~~p 38 (141)
T PRK10026 3 NITIYHN---------PACGTSRNTLEMIRNSGTEPTIIHYLETP 38 (141)
T ss_pred EEEEEeC---------CCCHHHHHHHHHHHHCCCCcEEEeeeCCC
Confidence 3666665 89999999999999999999988766543
No 156
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=91.28 E-value=0.61 Score=26.39 Aligned_cols=49 Identities=22% Similarity=0.256 Sum_probs=31.1
Q ss_pred CCCchHHHHHHHHHh---cCCCceEEeecCCCCch--hhhhhCCCCCccEEEeC
Q 028772 18 GDCPFSQRALLTLEE---KKVPYKRHLINISDKPQ--WFMEISPEGKVPVVKFD 66 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~---~gi~~~~~~v~~~~~~~--~~~~~~p~g~vP~L~~~ 66 (204)
..|++|.+.+..+.. .+-.++...++...... ......+...+|+++..
T Consensus 7 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 60 (69)
T cd01659 7 PWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKELKRYGVGGVPTLVVF 60 (69)
T ss_pred CCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHHHhCCCccccEEEEE
Confidence 578999999999993 23334444444443222 22246778899999753
No 157
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=91.14 E-value=0.5 Score=34.41 Aligned_cols=39 Identities=23% Similarity=0.253 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhc-CCCcccCCC-CChhHHHHHhHHHHHH
Q 028772 124 LEELKALDEHLKTH-GGPFIAGEK-VTAVDLSLAPKLYHLQ 162 (204)
Q Consensus 124 ~~~l~~le~~L~~~-~~~yl~G~~-~T~aD~~~~~~l~~~~ 162 (204)
.+.+..+++.|+.. ...|++|+. +|-.||.+++.|.-+.
T Consensus 114 ~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 114 MECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 45677888888864 348888877 9999999999998643
No 158
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=90.40 E-value=1.8 Score=26.71 Aligned_cols=50 Identities=22% Similarity=0.290 Sum_probs=34.5
Q ss_pred CCCchHHHHHHHHHh----cCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCe
Q 028772 18 GDCPFSQRALLTLEE----KKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDK 68 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~ 68 (204)
.+||+|.++.-.|+. .+..+....+|..+... ..+......+|++..+|.
T Consensus 9 ~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 9 PTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQ-KAMEYGIMAVPAIVINGD 62 (82)
T ss_pred CCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCHH-HHHHcCCccCCEEEECCE
Confidence 899999998888764 35456667777655333 334444567999988774
No 159
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=89.72 E-value=1.1 Score=31.04 Aligned_cols=31 Identities=13% Similarity=0.004 Sum_probs=26.1
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
..+.|.=|+|++-.|+++||+|+.+.+--..
T Consensus 7 ~~p~Cst~RKA~~~L~~~gi~~~~~d~~~~p 37 (126)
T TIGR01616 7 EKPGCANNARQKAALKASGHDVEVQDILKEP 37 (126)
T ss_pred eCCCCHHHHHHHHHHHHCCCCcEEEeccCCC
Confidence 3489999999999999999999988765433
No 160
>PRK10853 putative reductase; Provisional
Probab=89.14 E-value=1.1 Score=30.58 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=25.1
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecC
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~ 44 (204)
..+.|.=|++++-.|++.|++|+.+.+--
T Consensus 6 ~~~~C~t~rkA~~~L~~~~i~~~~~d~~k 34 (118)
T PRK10853 6 GIKNCDTIKKARRWLEAQGIDYRFHDYRV 34 (118)
T ss_pred cCCCCHHHHHHHHHHHHcCCCcEEeehcc
Confidence 34899999999999999999999886554
No 161
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=88.42 E-value=2.4 Score=32.19 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=54.8
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCC-chhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDK-PQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
+.||+|... ..+.|-||.++--+|+..|++|+...|--.+- ..-.++.+--.+.|-|-.+|..+.+...|.+.+.
T Consensus 141 v~lFmKG~p----~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdWPTfPQlyI~GEFiGGlDIl~~m~~ 216 (227)
T KOG0911|consen 141 VMLFMKGTP----EEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDWPTFPQLYVKGEFIGGLDILKEMHE 216 (227)
T ss_pred EEEEecCCC----CcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCCCCccceeECCEeccCcHHHHHHhh
Confidence 568888433 67899999999999999999987776554331 1123345556789999999988888777766544
No 162
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=88.01 E-value=2.6 Score=27.06 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=32.4
Q ss_pred CCCchHHHHHHHHHhcCC---CceEEeecCCCCchhhhhhCCCCCccEEEeCCeeee
Q 028772 18 GDCPFSQRALLTLEEKKV---PYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVA 71 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~ 71 (204)
.+|+||..+.-++....- .++...++..+.+ +......-..+|.++.+|..+.
T Consensus 22 ~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~~~~-e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 22 LSCHNCPDVVQALNLMAVLNPNIEHEMIDGALFQ-DEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred CCCCCcHHHHHHHHHHHHHCCCceEEEEEhHhCH-HHHHHcCCccCCEEEECCEEEE
Confidence 689999988887766522 1334444443333 3344444567999988876544
No 163
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=87.70 E-value=2.4 Score=26.30 Aligned_cols=54 Identities=28% Similarity=0.172 Sum_probs=37.9
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-----------Cchhhhh--hCCCCCccEEEeC-Ceeee
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-----------KPQWFME--ISPEGKVPVVKFD-DKWVA 71 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-----------~~~~~~~--~~p~g~vP~L~~~-~~~l~ 71 (204)
..||-|....-.|+..++.|+.+.+...- ..++|.+ .|..-.+|+|..+ |.++.
T Consensus 10 n~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 10 NLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred ccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 58999999999999999999999887543 1233432 3344578999764 44433
No 164
>PHA02125 thioredoxin-like protein
Probab=87.24 E-value=3.2 Score=25.50 Aligned_cols=45 Identities=11% Similarity=0.054 Sum_probs=31.8
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEe
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKF 65 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~ 65 (204)
.+|+.|.++.-.|+. +.+....+|..+ ..+..+...-..+|.+..
T Consensus 8 ~wC~~Ck~~~~~l~~--~~~~~~~vd~~~-~~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 8 EWCANCKMVKPMLAN--VEYTYVDVDTDE-GVELTAKHHIRSLPTLVN 52 (75)
T ss_pred CCCHhHHHHHHHHHH--HhheEEeeeCCC-CHHHHHHcCCceeCeEEC
Confidence 799999998888764 566666677544 334555555678999984
No 165
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.49 E-value=3.3 Score=28.22 Aligned_cols=80 Identities=13% Similarity=0.121 Sum_probs=54.6
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHH----HHHhcCCCceEEeecCCCCchhhhhhCCC-------CCccEEEe-C--Ce
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALL----TLEEKKVPYKRHLINISDKPQWFMEISPE-------GKVPVVKF-D--DK 68 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~----~L~~~gi~~~~~~v~~~~~~~~~~~~~p~-------g~vP~L~~-~--~~ 68 (204)
+-.|+-+|+++.+-.++||.|.++.= +|++.+-....+.+..++.+.|-...||. -.+|.|.. + .+
T Consensus 28 ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~Wk~p~n~FR~d~~~lt~vPTLlrw~~~~~ 107 (128)
T KOG3425|consen 28 IFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYWKDPANPFRKDPGILTAVPTLLRWKRQPQ 107 (128)
T ss_pred EEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcccCCCCccccCCCceeecceeeEEcCccc
Confidence 34566678878888899999998654 56667778888888888765555555553 34677753 2 35
Q ss_pred eeechHHHHHHHHH
Q 028772 69 WVADSDVIVRIIEE 82 (204)
Q Consensus 69 ~l~es~aI~~yL~~ 82 (204)
.+.+.+.-...|.+
T Consensus 108 rL~~~q~~~~~Lve 121 (128)
T KOG3425|consen 108 RLDGLQCLNDHLVE 121 (128)
T ss_pred cchHhHhhHHHHHH
Confidence 56666666666554
No 166
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=83.63 E-value=2 Score=29.36 Aligned_cols=30 Identities=17% Similarity=0.289 Sum_probs=14.2
Q ss_pred CCCccEEEe--CCeeeechHHHHHHHHHhCCC
Q 028772 57 EGKVPVVKF--DDKWVADSDVIVRIIEEKYPE 86 (204)
Q Consensus 57 ~g~vP~L~~--~~~~l~es~aI~~yL~~~~~~ 86 (204)
...-|-|.+ +|..++|+.||++||..-|-.
T Consensus 33 d~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~~ 64 (122)
T PF09635_consen 33 DESGPLLKDKKSGFELFEPNAIVRYLANDFEG 64 (122)
T ss_dssp S--S--EEE-S--S----HHHHHHHHTT--TT
T ss_pred ccccceeeecCCceEEecccHHHHHHHhhcCC
Confidence 334588855 579999999999999986643
No 167
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=82.24 E-value=3.8 Score=27.67 Aligned_cols=31 Identities=19% Similarity=0.099 Sum_probs=25.9
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
..+.|+=|++++-.|+..|++|+.+.+.-..
T Consensus 5 ~~~~C~t~rkA~~~L~~~~i~~~~~di~~~p 35 (114)
T TIGR00014 5 HNPRCSKSRNTLALLEDKGIEPEVVKYLKNP 35 (114)
T ss_pred ECCCCHHHHHHHHHHHHCCCCeEEEeccCCC
Confidence 3489999999999999999999987665433
No 168
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=80.36 E-value=1.4 Score=33.55 Aligned_cols=59 Identities=15% Similarity=0.108 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHHHHHhcccCCCCCccchHHHHHHHHhhcCcchH
Q 028772 124 LEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKDGCRRSMHE 194 (204)
Q Consensus 124 ~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 194 (204)
...+..++..|.++ +|.-|.+++-+|+.+|..+..- +....+++..+|+.++.+.-++.
T Consensus 10 ~~glk~l~~sLA~k--s~~~g~~~s~edv~vf~al~~e----------p~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEK--SYIEGYQLSKEDVVVFAALGVE----------PQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcc--cCCCCCCcccccceeehhcccC----------cchhhhhHHHHHHHHHHHHHHHH
Confidence 45688899999987 9999999999999999876531 11256788899998877655443
No 169
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=79.63 E-value=5.3 Score=26.83 Aligned_cols=29 Identities=24% Similarity=0.080 Sum_probs=25.1
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeecC
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLINI 44 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~ 44 (204)
+.+.|+=|++++-.|++.|++|+.+.+.-
T Consensus 5 ~~~~C~t~rkA~~~L~~~~i~~~~~di~~ 33 (112)
T cd03034 5 HNPRCSKSRNALALLEEAGIEPEIVEYLK 33 (112)
T ss_pred ECCCCHHHHHHHHHHHHCCCCeEEEeccc
Confidence 44899999999999999999999886553
No 170
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=71.97 E-value=4.7 Score=34.83 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=38.3
Q ss_pred CCCchHHHHHHHHHhcCCC---ceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeech----HHHHHHHHHh
Q 028772 18 GDCPFSQRALLTLEEKKVP---YKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADS----DVIVRIIEEK 83 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es----~aI~~yL~~~ 83 (204)
..||||-.+.-+++...+. ++...++....+ ++.+..-...||.+..++..+.+. ..+++.+.+.
T Consensus 127 ~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~-~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~l~~~ 198 (515)
T TIGR03140 127 LTCQNCPDVVQALNQMALLNPNISHTMIDGALFQ-DEVEALGIQGVPAVFLNGEEFHNGRMDLAELLEKLEET 198 (515)
T ss_pred CCCCCCHHHHHHHHHHHHhCCCceEEEEEchhCH-HHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHhhc
Confidence 6888888877777666553 333334433333 344555567999999887555442 3344555443
No 171
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=71.27 E-value=3.6 Score=27.46 Aligned_cols=28 Identities=25% Similarity=0.253 Sum_probs=20.8
Q ss_pred CCCCCchHHHHHHHHHhcCCCceEEeec
Q 028772 16 ILGDCPFSQRALLTLEEKKVPYKRHLIN 43 (204)
Q Consensus 16 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 43 (204)
..+.|.-|++++-.|++.|++|+.+.+.
T Consensus 2 ~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 2 GNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp E-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred cCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 3578999999999999999999987554
No 172
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=69.75 E-value=6 Score=34.16 Aligned_cols=65 Identities=15% Similarity=0.072 Sum_probs=38.7
Q ss_pred CCCchHHHHHHHHHhcCCC---ceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeec----hHHHHHHHHHh
Q 028772 18 GDCPFSQRALLTLEEKKVP---YKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVAD----SDVIVRIIEEK 83 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~e----s~aI~~yL~~~ 83 (204)
..||||-.+.-+++..-+. ++...++.... +++.+..-...||.+..++..+.+ -..+++.+.+.
T Consensus 126 ~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~~-~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~~~~ 197 (517)
T PRK15317 126 LSCHNCPDVVQALNLMAVLNPNITHTMIDGALF-QDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAKLDTG 197 (517)
T ss_pred CCCCCcHHHHHHHHHHHHhCCCceEEEEEchhC-HhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHhcc
Confidence 6888888777766555442 33334443332 345555556799999988755444 23455666553
No 173
>PF06110 DUF953: Eukaryotic protein of unknown function (DUF953); InterPro: IPR010357 This family consists of several hypothetical eukaryotic proteins of unknown function that are thioredoxin-like.; PDB: 1V9W_A 1WOU_A.
Probab=69.56 E-value=13 Score=25.44 Aligned_cols=70 Identities=11% Similarity=0.197 Sum_probs=33.3
Q ss_pred EeeeccCCCCCCCCCCchHHHHHHHH----HhcCCCceEEeecCCCCch------hhhhhCC---CCCccEEEe--CCee
Q 028772 5 ICVKAAVGAPDILGDCPFSQRALLTL----EEKKVPYKRHLINISDKPQ------WFMEISP---EGKVPVVKF--DDKW 69 (204)
Q Consensus 5 l~~~~~~~~~~~~~~sp~~~~v~~~L----~~~gi~~~~~~v~~~~~~~------~~~~~~p---~g~vP~L~~--~~~~ 69 (204)
|++..+.+ ..-..+||.|.++.-.+ ....-....+.+..++.+. .|. .+| ...+|.|.. ++..
T Consensus 24 l~F~gs~d-~~g~sWCPDC~~aep~v~~~f~~~~~~~~lv~v~VG~r~~Wkdp~n~fR-~~p~~~l~~IPTLi~~~~~~r 101 (119)
T PF06110_consen 24 LLFTGSKD-ETGQSWCPDCVAAEPVVEKAFKKAPENARLVYVEVGDRPEWKDPNNPFR-TDPDLKLKGIPTLIRWETGER 101 (119)
T ss_dssp EEEE--B--TTS-BSSHHHHHHHHHHHHHHHH-STTEEEEEEE---HHHHC-TTSHHH-H--CC---SSSEEEECTSS-E
T ss_pred EEEEccCC-CCCCcccHHHHHHHHHHHHHHHhCCCCceEEEEEcCCHHHhCCCCCCce-EcceeeeeecceEEEECCCCc
Confidence 44444554 66778999999988544 3332244555555544222 222 233 367899974 3455
Q ss_pred eechHHH
Q 028772 70 VADSDVI 76 (204)
Q Consensus 70 l~es~aI 76 (204)
+.|....
T Consensus 102 L~e~e~~ 108 (119)
T PF06110_consen 102 LVEEECL 108 (119)
T ss_dssp EEHHHHH
T ss_pred cchhhhc
Confidence 6665443
No 174
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=56.15 E-value=54 Score=21.64 Aligned_cols=64 Identities=23% Similarity=0.438 Sum_probs=39.8
Q ss_pred CCCchHHHHHHHHHhcCCCceEEeecCCC-Cchh---hhhhCC---CCCccEEEeCCe-eeechHHHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQW---FMEISP---EGKVPVVKFDDK-WVADSDVIVRIIEE 82 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~---~~~~~p---~g~vP~L~~~~~-~l~es~aI~~yL~~ 82 (204)
+.||+|.+..-.+...+..-....++... ...+ ....++ ...+-+ ..+|. .+.++.|+.+-+..
T Consensus 5 g~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~g~~~~~G~~A~~~l~~~ 76 (114)
T PF04134_consen 5 GDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDADSRLHL-IDDGERVYRGSDAVLRLLRR 76 (114)
T ss_pred CCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHcCeeEE-ecCCCEEEEcHHHHHHHHHH
Confidence 58999999998888887644445555522 1111 112222 234444 55665 99999999887654
No 175
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=55.54 E-value=63 Score=21.93 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=17.0
Q ss_pred CCCCchHHHHHHHHHh----cCCCceEEeec
Q 028772 17 LGDCPFSQRALLTLEE----KKVPYKRHLIN 43 (204)
Q Consensus 17 ~~~sp~~~~v~~~L~~----~gi~~~~~~v~ 43 (204)
..+||+|+++.=.|.. .++++-.+.++
T Consensus 32 ~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd 62 (122)
T TIGR01295 32 RKTCPYCRKFSGTLSGVVAQTKAPIYYIDSE 62 (122)
T ss_pred CCCChhHHHHhHHHHHHHHhcCCcEEEEECC
Confidence 4699999996665543 34555445444
No 176
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=54.69 E-value=39 Score=29.56 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=31.3
Q ss_pred CCCchHHHHHHHH----Hhc-CCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeee
Q 028772 18 GDCPFSQRALLTL----EEK-KVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVA 71 (204)
Q Consensus 18 ~~sp~~~~v~~~L----~~~-gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~ 71 (204)
..||||-++.-++ .+. +|..+.+.+. +. ++..+...-..+|.++.||..+.
T Consensus 486 ~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~--~~-~~~~~~~~v~~vP~~~i~~~~~~ 541 (555)
T TIGR03143 486 LSCTLCPDVVLAAQRIASLNPNVEAEMIDVS--HF-PDLKDEYGIMSVPAIVVDDQQVY 541 (555)
T ss_pred CCCCCcHHHHHHHHHHHHhCCCceEEEEECc--cc-HHHHHhCCceecCEEEECCEEEE
Confidence 6888887766544 343 5665555443 32 33444455678999998875543
No 177
>PRK09266 hypothetical protein; Provisional
Probab=52.31 E-value=21 Score=27.82 Aligned_cols=57 Identities=21% Similarity=0.331 Sum_probs=43.0
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCC
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~ 85 (204)
.+...|++++...+...+ .++.|+-.+..|-+|+-..++..+.....|.+.|.+.|-
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~~ 259 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAYE 259 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHHH
Confidence 456679999998888755 344566677789999999988877656788888877663
No 178
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=47.98 E-value=34 Score=26.96 Aligned_cols=57 Identities=14% Similarity=0.259 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcCCCceEEeecCCCC-chhhhhhC----CCCCccEEEeCCeeeechHHHHHH
Q 028772 23 SQRALLTLEEKKVPYKRHLINISDK-PQWFMEIS----PEGKVPVVKFDDKWVADSDVIVRI 79 (204)
Q Consensus 23 ~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~----p~g~vP~L~~~~~~l~es~aI~~y 79 (204)
|..||.+|+-.++.|+.+.|.+... .+|+..+. -.-.+|.+...|.-|.....|.+-
T Consensus 150 C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~~~LPrVFV~GryIGgaeeV~~L 211 (281)
T KOG2824|consen 150 CNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKAVSLPRVFVKGRYIGGAEEVVRL 211 (281)
T ss_pred HHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhcccccCccCeEEEccEEeccHHHhhhh
Confidence 6889999999999999999998762 33333322 245789888888888888877663
No 179
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=44.12 E-value=50 Score=21.94 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=31.0
Q ss_pred CCCchHHHHHHHHHhcCCC---ceEEeecCCCCchhhhhhCCCCCccEEEe
Q 028772 18 GDCPFSQRALLTLEEKKVP---YKRHLINISDKPQWFMEISPEGKVPVVKF 65 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~p~g~vP~L~~ 65 (204)
.+||+|..++-+|++..-. ++...++..+ .++......-..+|.+..
T Consensus 32 ~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~-~~~l~~~~~v~~vPt~~i 81 (113)
T cd02975 32 EGCQYCEVTKQLLEELSELSDKLKLEIYDFDE-DKEKAEKYGVERVPTTIF 81 (113)
T ss_pred CCCCChHHHHHHHHHHHHhcCceEEEEEeCCc-CHHHHHHcCCCcCCEEEE
Confidence 5999999888888755432 3445556543 344555555678999975
No 180
>COG3011 Predicted thiol-disulfide oxidoreductase [General function prediction only]
Probab=40.46 E-value=1.2e+02 Score=21.35 Aligned_cols=75 Identities=15% Similarity=0.157 Sum_probs=45.2
Q ss_pred ccCCCCCCC--CCCchHHHHHHHHHhcCCCceEEeecCCC-CchhhhhhCCC---C-CccEEEeCCeeeechHHHHHHHH
Q 028772 9 AAVGAPDIL--GDCPFSQRALLTLEEKKVPYKRHLINISD-KPQWFMEISPE---G-KVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 9 ~~~~~~~~~--~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~---g-~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
+.+++.+++ +.||+|-..--+|....-.-..+..++.. .....++..+. . ..=.++.+|+.+.+|.|+++-+.
T Consensus 5 ~~~p~~vvlyDG~C~lC~~~vrfLi~~D~~~~i~f~~~q~e~g~~~l~~~~l~~~~~~s~~~~~~g~~~~~sdA~~~i~~ 84 (137)
T COG3011 5 MKKPDLVVLYDGVCPLCDGWVRFLIRRDQGGRIRFAALQSEPGQALLEAAGLDPEDVDSVLLVEAGQLLVGSDAAIRILR 84 (137)
T ss_pred CCCCCEEEEECCcchhHHHHHHHHHHhccCCcEEEEeccCchhhhHHhhcCCChhhhheeeEecCCceEeccHHHHHHHH
Confidence 334444444 48999998888888876655555444432 22223333322 1 12233558899999999999777
Q ss_pred Hh
Q 028772 82 EK 83 (204)
Q Consensus 82 ~~ 83 (204)
..
T Consensus 85 ~L 86 (137)
T COG3011 85 LL 86 (137)
T ss_pred HC
Confidence 54
No 181
>PHA03075 glutaredoxin-like protein; Provisional
Probab=40.26 E-value=50 Score=22.48 Aligned_cols=67 Identities=21% Similarity=0.301 Sum_probs=46.3
Q ss_pred ceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHH
Q 028772 2 AVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
|++|+.| +.|+-|.-+.-+|....=+|+..+|+.-. | .+-.|++=+|..++. +.=-+.+.+||.
T Consensus 4 tLILfGK---------P~C~vCe~~s~~l~~ledeY~ilrVNIlS----f--FsK~g~v~~lg~d~~-y~lInn~~~~lg 67 (123)
T PHA03075 4 TLILFGK---------PLCSVCESISEALKELEDEYDILRVNILS----F--FSKDGQVKVLGMDKG-YTLINNFFKHLG 67 (123)
T ss_pred eEEEeCC---------cccHHHHHHHHHHHHhhccccEEEEEeee----e--eccCCceEEEecccc-eehHHHHHHhhc
Confidence 4667777 89999999999999888899999999742 1 122467777765432 122356677776
Q ss_pred HhC
Q 028772 82 EKY 84 (204)
Q Consensus 82 ~~~ 84 (204)
..+
T Consensus 68 ne~ 70 (123)
T PHA03075 68 NEY 70 (123)
T ss_pred ccE
Confidence 543
No 182
>PHA03158 hypothetical protein; Provisional
Probab=34.38 E-value=2e+02 Score=21.53 Aligned_cols=66 Identities=18% Similarity=0.190 Sum_probs=45.1
Q ss_pred CCeeeechHHHHHHHHHhCCCCCCCCChHHhhhhcchHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHh
Q 028772 66 DDKWVADSDVIVRIIEEKYPEPSLTNPPEFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLK 135 (204)
Q Consensus 66 ~~~~l~es~aI~~yL~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 135 (204)
|-.+.++|....+-|.+.-|.-.+....+++.+...+.........+ .+..+.+++.++.+|+-+.
T Consensus 206 G~~V~y~sLpf~ERl~Rs~pPWCv~t~~EK~~~~kQllka~kkc~~~----s~~~~~leeei~eleks~a 271 (273)
T PHA03158 206 GKHVRFDDLPFMERIKRSGPPWCIKTAKEKAAILKQLLKAAKKCCKN----SEHEKELEEEIEELEKSLA 271 (273)
T ss_pred CEEEEeccCcHHHHHhccCCCcEeecHHHhHHHHHHHHHHHHHHhcc----hHHHHHHHHHHHHHHHhhc
Confidence 34789999999999998776555566677777666665555444333 3445677777888877665
No 183
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=33.98 E-value=49 Score=19.62 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=12.8
Q ss_pred CCCchHHHHHHHHHh
Q 028772 18 GDCPFSQRALLTLEE 32 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~ 32 (204)
..|+||+||-.+|..
T Consensus 13 DDssFChrvta~LN~ 27 (70)
T COG5515 13 DDSSFCHRVTAALNK 27 (70)
T ss_pred chHHHHHHHHHHHhC
Confidence 488999999998864
No 184
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=32.52 E-value=1.1e+02 Score=26.25 Aligned_cols=73 Identities=16% Similarity=0.330 Sum_probs=52.9
Q ss_pred CCCchHHHHHHHHHhcCC---CceEEeecCC--CCchhhhhhCC-----CCCccEE----Ee-C--CeeeechHHHHHHH
Q 028772 18 GDCPFSQRALLTLEEKKV---PYKRHLINIS--DKPQWFMEISP-----EGKVPVV----KF-D--DKWVADSDVIVRII 80 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi---~~~~~~v~~~--~~~~~~~~~~p-----~g~vP~L----~~-~--~~~l~es~aI~~yL 80 (204)
..|||-.|+.++..++.. .|.++.+.-. +|.+|+.+++- .++-|++ ++ + |.-|.+...-++|.
T Consensus 2 ~~cp~ya~~ellad~l~~~l~~f~~~ki~~~p~~w~~wl~~~c~~~~w~~~~spiiwrel~~rggkg~l~gg~~~f~e~~ 81 (452)
T cd05295 2 ADCPYYAKAELLADYLQKNLPDFRVHKIVKHPDEWEDWLQDLCKKNGWSHKRSPIIWRELLDRGGKGLLLGGCNEFLEYA 81 (452)
T ss_pred CCCchhHHHHHHHHHHHhhCCCceEEEccCChHHHHHHHHHHHHhcCCccCCCCeeHHHHHhcCCCceEecChHHHHHHH
Confidence 479999999999988765 4666655542 36666665432 3677998 33 3 37799999999999
Q ss_pred HHhCCCCCCC
Q 028772 81 EEKYPEPSLT 90 (204)
Q Consensus 81 ~~~~~~~~l~ 90 (204)
..-|+.....
T Consensus 82 ~~yyg~~s~m 91 (452)
T cd05295 82 ESYYGITSSM 91 (452)
T ss_pred HHHhCccccc
Confidence 9999865433
No 185
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=32.38 E-value=47 Score=22.22 Aligned_cols=25 Identities=20% Similarity=0.290 Sum_probs=20.4
Q ss_pred cEE-EeCCeeeechHHHHHHHHHhCC
Q 028772 61 PVV-KFDDKWVADSDVIVRIIEEKYP 85 (204)
Q Consensus 61 P~L-~~~~~~l~es~aI~~yL~~~~~ 85 (204)
|.+ ..+|.+++.|..|+++.+++|.
T Consensus 3 ~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 3 PKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred ceEEEECCEEEEeHHHHHHHHCcchH
Confidence 444 4588999999999999988774
No 186
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=32.32 E-value=46 Score=25.56 Aligned_cols=55 Identities=15% Similarity=0.267 Sum_probs=38.8
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeee--echHHHHHHHHHh
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWV--ADSDVIVRIIEEK 83 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l--~es~aI~~yL~~~ 83 (204)
.+...|++++...+...+ .++-|+..+..|-+|+-..++..+ .....|.+.|.+.
T Consensus 196 ~~~~~g~~v~e~~i~~~dL~~adevfl~ns~~gv~pV~~i~~~~~~~~~~~~~~~~l~~~ 255 (256)
T cd00449 196 LAKELGIKVEERPISLDELYAADEVFLTGTAAEVTPVTEIDGRGIGDGKPGPVTRKLREL 255 (256)
T ss_pred HHHHcCCeEEEEecCHHHHhhCCEEEEccccceEEEEEEECCeecCCCCCCHHHHHHHHh
Confidence 456779999888887654 344466666678899998887766 4556777776543
No 187
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=32.02 E-value=61 Score=25.24 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=38.8
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhC
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKY 84 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~ 84 (204)
.++..|++++...+...+ .++-|+..+..|-+|+-..++..+ ++..+.+.|.+.+
T Consensus 208 ~~~~~g~~v~e~~i~~~dL~~adevfltns~~gi~pV~~id~~~~-~~g~~~~~l~~~~ 265 (268)
T PRK06092 208 LLAQSGYPVVEVDASLEELLQADEVFICNSLMPVWPVRAIGETSY-SSGTLTRYLQPLC 265 (268)
T ss_pred HHHHcCCeEEEEECCHHHHhhCCEEEEeCCcceEEEEEEECCEEc-cchHHHHHHHHHH
Confidence 456679999998888654 344455566678899999888765 4467777776544
No 188
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=31.57 E-value=1.5e+02 Score=22.27 Aligned_cols=48 Identities=17% Similarity=0.244 Sum_probs=29.8
Q ss_pred CCCchHHHHHHHHHhcCC---CceEEeecCCCCchhhhhhCCCCCccEEEeC
Q 028772 18 GDCPFSQRALLTLEEKKV---PYKRHLINISDKPQWFMEISPEGKVPVVKFD 66 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~ 66 (204)
.+||+|..+.-+++..-- .+....+|... .++..+...-..+|.+..+
T Consensus 143 ~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~-~~~~~~~~~V~~vPtl~i~ 193 (215)
T TIGR02187 143 PTCPYCPYAVLMAHKFALANDKILGEMIEANE-NPDLAEKYGVMSVPKIVIN 193 (215)
T ss_pred CCCCCcHHHHHHHHHHHHhcCceEEEEEeCCC-CHHHHHHhCCccCCEEEEe
Confidence 689999988887765432 23334456543 3334444555678999764
No 189
>COG2761 FrnE Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.43 E-value=42 Score=25.76 Aligned_cols=26 Identities=31% Similarity=0.291 Sum_probs=17.1
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhc
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEK 33 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~ 33 (204)
|++++++. .=..||||...+--|+..
T Consensus 4 ~~i~I~v~-------sD~vCPwC~ig~~rL~ka 29 (225)
T COG2761 4 MKIEIDVF-------SDVVCPWCYIGKRRLEKA 29 (225)
T ss_pred ceEEEEEE-------eCCcCchhhcCHHHHHHH
Confidence 56666666 336999997665555444
No 190
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=28.70 E-value=38 Score=26.67 Aligned_cols=56 Identities=9% Similarity=0.087 Sum_probs=39.2
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeee----echHHHHHHHHHhC
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWV----ADSDVIVRIIEEKY 84 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l----~es~aI~~yL~~~~ 84 (204)
.++..|++++...+...+ .++-|+..+..|-+|+-..++..+ .....|.+.|.+.+
T Consensus 211 ~~~~~Gi~v~e~~i~~~~l~~ade~f~~ns~~gi~pV~~i~~~~~~~~~~~~gp~~~~l~~~~ 273 (279)
T cd01557 211 LARDLGIKVEERPITRDELYEADEVFATGTAAVVTPVGEIDYRGKEPGEGEVGPVTKKLYDLL 273 (279)
T ss_pred HHHHcCCeEEEEeCCHHHHhhCCEEEEecceeEEEEEEEEccccccCCCCCCCHHHHHHHHHH
Confidence 467789999998888754 344455566678889998887665 45566777665543
No 191
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=28.23 E-value=74 Score=22.73 Aligned_cols=31 Identities=32% Similarity=0.557 Sum_probs=22.3
Q ss_pred CCchHHHHHHHHHhcCCCceEEeecCCCCch
Q 028772 19 DCPFSQRALLTLEEKKVPYKRHLINISDKPQ 49 (204)
Q Consensus 19 ~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~ 49 (204)
.-+.+.+++-.|++.||+|+.........++
T Consensus 12 D~~~~~~a~~~L~~~gi~~~~~V~saHR~p~ 42 (150)
T PF00731_consen 12 DLPIAEEAAKTLEEFGIPYEVRVASAHRTPE 42 (150)
T ss_dssp GHHHHHHHHHHHHHTT-EEEEEE--TTTSHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEeccCCHH
Confidence 4478999999999999999987766655433
No 192
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=27.39 E-value=1.1e+02 Score=16.18 Aligned_cols=25 Identities=16% Similarity=0.395 Sum_probs=20.4
Q ss_pred CCCccEEEeCCeeeechHHHHHHHH
Q 028772 57 EGKVPVVKFDDKWVADSDVIVRIIE 81 (204)
Q Consensus 57 ~g~vP~L~~~~~~l~es~aI~~yL~ 81 (204)
.|.+|....++..+.....|.+|+.
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 5788888777888888888888875
No 193
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=27.16 E-value=1.7e+02 Score=18.59 Aligned_cols=46 Identities=9% Similarity=-0.126 Sum_probs=26.9
Q ss_pred CCCchHHHHHHHH--------HhcCCCceEEeecCCCC---chhhhhhCCCCCccEEE
Q 028772 18 GDCPFSQRALLTL--------EEKKVPYKRHLINISDK---PQWFMEISPEGKVPVVK 64 (204)
Q Consensus 18 ~~sp~~~~v~~~L--------~~~gi~~~~~~v~~~~~---~~~~~~~~p~g~vP~L~ 64 (204)
.+|++|.+..-.+ ...+ .+....+|.... ..++.+...-..+|.+.
T Consensus 21 ~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~~Pti~ 77 (104)
T cd02953 21 DWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFGPPTYL 77 (104)
T ss_pred chhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCCCCEEE
Confidence 5888988876433 1222 456666676542 23455555556789875
No 194
>PRK06606 branched-chain amino acid aminotransferase; Validated
Probab=25.03 E-value=67 Score=25.67 Aligned_cols=54 Identities=9% Similarity=0.169 Sum_probs=37.0
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeee--chHHHHHHHHH
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVA--DSDVIVRIIEE 82 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~--es~aI~~yL~~ 82 (204)
++...|++++...+...+ .++-|+..+..|-+|+-..++..+. ....+.+.|.+
T Consensus 228 ~~~~~g~~v~e~~i~~~eL~~AdevfltnS~~gi~PV~~id~~~~~~g~~g~~~~~L~~ 286 (306)
T PRK06606 228 LAKDLGIEVIERRITRDELYIADEVFFTGTAAEVTPIREVDGRQIGNGKRGPITEKLQS 286 (306)
T ss_pred HHHHcCCcEEEEeCCHHHHhhCCEEEEcCCcceEEEEEEECcEECCCCCCCHHHHHHHH
Confidence 567789999998888654 3444666667788999998887664 33455554443
No 195
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=24.99 E-value=99 Score=24.03 Aligned_cols=14 Identities=14% Similarity=0.536 Sum_probs=11.5
Q ss_pred CCCchHHHHHHHHH
Q 028772 18 GDCPFSQRALLTLE 31 (204)
Q Consensus 18 ~~sp~~~~v~~~L~ 31 (204)
+.||||++..-.+.
T Consensus 127 p~CpyC~kl~~~l~ 140 (251)
T PRK11657 127 PNCPYCKQFWQQAR 140 (251)
T ss_pred CCChhHHHHHHHHH
Confidence 59999999977664
No 196
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=24.79 E-value=1.3e+02 Score=21.68 Aligned_cols=29 Identities=28% Similarity=0.432 Sum_probs=24.1
Q ss_pred CCchHHHHHHHHHhcCCCceEEeecCCCC
Q 028772 19 DCPFSQRALLTLEEKKVPYKRHLINISDK 47 (204)
Q Consensus 19 ~sp~~~~v~~~L~~~gi~~~~~~v~~~~~ 47 (204)
.-|.++++...|+..||+|+.........
T Consensus 10 D~~~~~~a~~~L~~~gi~~dv~V~SaHRt 38 (156)
T TIGR01162 10 DLPTMKKAADILEEFGIPYELRVVSAHRT 38 (156)
T ss_pred hHHHHHHHHHHHHHcCCCeEEEEECcccC
Confidence 34788999999999999999888777654
No 197
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=24.44 E-value=1e+02 Score=19.25 Aligned_cols=24 Identities=21% Similarity=0.393 Sum_probs=19.7
Q ss_pred CchHHHHHHHHHhcCCCceEEeec
Q 028772 20 CPFSQRALLTLEEKKVPYKRHLIN 43 (204)
Q Consensus 20 sp~~~~v~~~L~~~gi~~~~~~v~ 43 (204)
--|++|+.-+|+..||+|+..+-.
T Consensus 15 vGF~rk~L~I~E~~~is~Eh~PSG 38 (76)
T cd04911 15 VGFGRKLLSILEDNGISYEHMPSG 38 (76)
T ss_pred hcHHHHHHHHHHHcCCCEeeecCC
Confidence 357899999999999999876433
No 198
>KOG4023 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.19 E-value=87 Score=20.70 Aligned_cols=43 Identities=21% Similarity=0.362 Sum_probs=31.3
Q ss_pred CceEEeeeccCCCCCCCCCCchHHHHHHHHHhcCCCceEEeecCCC
Q 028772 1 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISD 46 (204)
Q Consensus 1 m~~~l~~~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~ 46 (204)
|.++.|+.-|.|...+-.. -+.+..+|....|+++.+.+....
T Consensus 2 ~~irvyvasssg~~eik~k---qqevv~~Ld~~ki~fk~~di~~~e 44 (108)
T KOG4023|consen 2 MVIRVYVASSSGSTEIKKK---QQEVVRFLDANKIGFKEIDITAYE 44 (108)
T ss_pred CceEEEEecCCCchHHHhh---hhhhhhhhhcccCCcceeeccchh
Confidence 6788899877765554433 456778888888999888777654
No 199
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.17 E-value=3e+02 Score=22.87 Aligned_cols=96 Identities=9% Similarity=-0.005 Sum_probs=55.5
Q ss_pred cEEEeCCeeeechHHHHHHHHHhCCCC-CCCCChHHhhhhcchHH---------------HHHHhhcCCCCCchHHHHHH
Q 028772 61 PVVKFDDKWVADSDVIVRIIEEKYPEP-SLTNPPEFASLGSKIFP---------------SFVNFLKSKDPNDGTEQALL 124 (204)
Q Consensus 61 P~L~~~~~~l~es~aI~~yL~~~~~~~-~l~~~~~~~~~~~~l~~---------------~~~~~~~~~~~~~~~~~~~~ 124 (204)
+-+.+.++.+.|+.+|...|...-..- +-+++.++.++..|+.. .+...+-...-.+-....+.
T Consensus 99 ~~~~~~dQ~~VEaa~la~aL~~a~~~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~G~~~d~~~i~ 178 (361)
T PF10022_consen 99 GFIGDYDQRLVEAASLALALLRAPEWLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKVGEEYDEERID 178 (361)
T ss_pred CCcccchhhHhHHHHHHHHHHHCHHHHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 344455799999999999888632211 22456677777666542 11111111112223347888
Q ss_pred HHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHH
Q 028772 125 EELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKL 158 (204)
Q Consensus 125 ~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l 158 (204)
..|+.+|+.-.+. .|..-..-.-.|....-.+
T Consensus 179 ~~l~~~e~~Y~Gd--GWY~DG~~~~~DYYns~ai 210 (361)
T PF10022_consen 179 YDLERIEEWYLGD--GWYSDGPEFQFDYYNSWAI 210 (361)
T ss_pred HHHHHHHHHhccC--CccccCCccCCcchHHHHH
Confidence 8899999887754 6665333445576553333
No 200
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=23.69 E-value=1.1e+02 Score=22.60 Aligned_cols=15 Identities=27% Similarity=0.669 Sum_probs=12.9
Q ss_pred CCCchHHHHHHHHHh
Q 028772 18 GDCPFSQRALLTLEE 32 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~ 32 (204)
+.||||++..-.+..
T Consensus 87 ~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 87 PDCPYCRKLEKELKP 101 (197)
T ss_pred CCCccHHHHHHHHhh
Confidence 589999999988874
No 201
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional
Probab=23.55 E-value=88 Score=24.60 Aligned_cols=54 Identities=15% Similarity=0.287 Sum_probs=37.2
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeee-chHHHHHHHHH
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVA-DSDVIVRIIEE 82 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~-es~aI~~yL~~ 82 (204)
.++..|++++...+...+ .++-|...+..|-+|+-..++..+. ....+...|.+
T Consensus 212 ~~~~~g~~v~e~~i~~~dL~~adeifl~ns~~gv~pV~~i~~~~~~g~~g~~~~~l~~ 269 (283)
T PRK07650 212 VLEELGIEVKEGFYTKEELLSADEVFVTNSIQEIVPLTRIEERDFPGKVGMVTKRLQN 269 (283)
T ss_pred HHHHcCCeEEEEecCHHHHhhCCEeeeecCcccEEEEEEECCEEeCCCCCHHHHHHHH
Confidence 457789999988887754 3445666667799999998887663 23455555543
No 202
>PRK13356 aminotransferase; Provisional
Probab=23.13 E-value=75 Score=25.06 Aligned_cols=54 Identities=24% Similarity=0.292 Sum_probs=37.5
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
.+...|++++...+...+ .++-|+..+..+-+|+-..++..+. ...|.+.|.+.
T Consensus 221 ~a~~~gi~v~e~~i~~~eL~~adevfltns~~gi~PV~~id~~~~~-~g~~~~~l~~~ 277 (286)
T PRK13356 221 LLREDGVTVVETTLTYEDFLEADEVFSTGNYSKVVPVTRFDDRSLQ-PGPVTRRAREL 277 (286)
T ss_pred HHHHcCCeEEEEecCHHHHHhcCceEEecChheEEEEEEECCEEec-CChHHHHHHHH
Confidence 457789999998888654 3445666666788899998887663 35666655543
No 203
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.
Probab=22.21 E-value=86 Score=24.87 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=36.8
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeee--chHHHHHHHHH
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVA--DSDVIVRIIEE 82 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~--es~aI~~yL~~ 82 (204)
++...|++++...+.+.+ .++-|+..+..|-+|+-..++..+. ....|.+.|.+
T Consensus 220 la~~~g~~v~e~~i~~~eL~~adevfltns~~gv~PV~~id~~~~~~~~~g~~~~~l~~ 278 (298)
T TIGR01122 220 LAKELGIEVVEQPISREELYTADEAFFTGTAAEITPIREVDGRKIGNGRRGPVTKKLQE 278 (298)
T ss_pred HHHHcCCcEEEEeCCHHHHhhCCEEEEcCCcceEEEEEEECCEECCCCCCChHHHHHHH
Confidence 467789999999888754 3344566667789999998876663 23455544443
No 204
>PF12123 Amidase02_C: N-acetylmuramoyl-l-alanine amidase; InterPro: IPR021976 This domain is found in bacteria and viruses. This domain is about 50 amino acids in length. This domain is classified with the enzyme classification code 3.5.1.28 from EC. This domain is the C-terminal of the enzyme which hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides. ; PDB: 2L48_B.
Probab=21.96 E-value=96 Score=17.19 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=18.0
Q ss_pred CCCCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 55 SPEGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 55 ~p~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
+|...+|.+++++..=.+-..+-.||+++
T Consensus 11 ~~~~Gl~y~vT~~~s~~~L~k~~~wld~r 39 (45)
T PF12123_consen 11 QSKDGLPYFVTDPLSDAELDKFTAWLDER 39 (45)
T ss_dssp -T-TS-EEEEE----HHHHHHHHHHHHHT
T ss_pred ecCCCcEEEEeCCCCHHHHHHHHHHHHhc
Confidence 34567899999887767888888898875
No 205
>PF02184 HAT: HAT (Half-A-TPR) repeat; InterPro: IPR003107 The HAT (Half A TPR) repeat has a repetitive pattern characterised by three aromatic residues with a conserved spacing. They are structurally and sequentially similar to TPRs (tetratricopeptide repeats), though they lack the highly conserved alanine and glycine residues found in TPRs. The number of HAT repeats found in different proteins varies between 9 and 12. HAT-repeat-containing proteins appear to be components of macromolecular complexes that are required for RNA processing []. The repeats may be involved in protein-protein interactions. The HAT motif has striking structural similarities to HEAT repeats (IPR000357 from INTERPRO), being of a similar length and consisting of two short helices connected by a loop domain, as in HEAT repeats.; GO: 0006396 RNA processing, 0005622 intracellular
Probab=21.94 E-value=87 Score=15.97 Aligned_cols=16 Identities=25% Similarity=0.233 Sum_probs=11.8
Q ss_pred hcCcchHhhHhhhhcc
Q 028772 188 CRRSMHELVLSYAVFE 203 (204)
Q Consensus 188 ~~~p~~~~~l~~~~~~ 203 (204)
.-+|.++.+++-+.||
T Consensus 15 ~~hp~~k~WikyAkFE 30 (32)
T PF02184_consen 15 LVHPEVKNWIKYAKFE 30 (32)
T ss_pred HhCCCchHHHHHHHhh
Confidence 3578888888877776
No 206
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=21.77 E-value=1.7e+02 Score=18.99 Aligned_cols=65 Identities=17% Similarity=0.110 Sum_probs=39.1
Q ss_pred chHHHHHHHHHhcCCCceEEeecCCCCchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHHhCCCC
Q 028772 21 PFSQRALLTLEEKKVPYKRHLINISDKPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEEKYPEP 87 (204)
Q Consensus 21 p~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~~~~~~ 87 (204)
|-+....-.|+..|+++-...=+......++.+.--.-.+| ++.+.+++-..++.+||.+.++..
T Consensus 17 pga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~--~~~~~i~ts~~~~~~~l~~~~~~~ 81 (101)
T PF13344_consen 17 PGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP--VDEDEIITSGMAAAEYLKEHKGGK 81 (101)
T ss_dssp TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGGEEEHHHHHHHHHHHHTTSS
T ss_pred cCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC--CCcCEEEChHHHHHHHHHhcCCCC
Confidence 34555666788889888666433333334444322122355 355788999999999999976544
No 207
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=21.71 E-value=2.1e+02 Score=17.69 Aligned_cols=50 Identities=16% Similarity=0.041 Sum_probs=29.6
Q ss_pred CCCchHHHHHHHHHhc----CCCceEEeecCCCCchhhhhhCCCCCccEEEe--CCe
Q 028772 18 GDCPFSQRALLTLEEK----KVPYKRHLINISDKPQWFMEISPEGKVPVVKF--DDK 68 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~----gi~~~~~~v~~~~~~~~~~~~~p~g~vP~L~~--~~~ 68 (204)
.+|+.|++..-.|... +-.+....++..+.+. +.+...-..+|++.. +|.
T Consensus 24 ~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~~-~~~~~~i~~~Pt~~~~~~g~ 79 (97)
T cd02984 24 PWAEPCKQMNQVFEELAKEAFPSVLFLSIEAEELPE-ISEKFEITAVPTFVFFRNGT 79 (97)
T ss_pred CCCHHHHHHhHHHHHHHHHhCCceEEEEEccccCHH-HHHhcCCccccEEEEEECCE
Confidence 5888888887766542 3345666666654333 333333467898753 553
No 208
>PRK07544 branched-chain amino acid aminotransferase; Validated
Probab=21.06 E-value=86 Score=24.82 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=36.9
Q ss_pred HHHhcCCCceEEeecCCC---CchhhhhhCCCCCccEEEeCCeeeechHHHHHHHHH
Q 028772 29 TLEEKKVPYKRHLINISD---KPQWFMEISPEGKVPVVKFDDKWVADSDVIVRIIEE 82 (204)
Q Consensus 29 ~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~g~vP~L~~~~~~l~es~aI~~yL~~ 82 (204)
+++..|++++...+...+ .++-|+..+..|-+|+-..++..+. ...+.+.|.+
T Consensus 225 ~a~~~g~~v~e~~i~~~eL~~adevfltnS~~gi~PV~~i~~~~~~-~g~~~~~l~~ 280 (292)
T PRK07544 225 LAKRRGIEVVERHIMPEELAGFSECFLTGTAAEVTPVSEIGEYRFT-PGAITRDLMD 280 (292)
T ss_pred HHHHcCCeEEEEecCHHHHhhcCceeecCccceEEEEEEEeeEEeC-CChHHHHHHH
Confidence 456689999999888755 3445666677789999998876653 3455555544
No 209
>PF12728 HTH_17: Helix-turn-helix domain
Probab=20.49 E-value=1.7e+02 Score=15.98 Aligned_cols=27 Identities=30% Similarity=0.598 Sum_probs=22.4
Q ss_pred CCCccEEEeCCeeeechHHHHHHHHHh
Q 028772 57 EGKVPVVKFDDKWVADSDVIVRIIEEK 83 (204)
Q Consensus 57 ~g~vP~L~~~~~~l~es~aI~~yL~~~ 83 (204)
.|.+|....++.....-..|.+|+.++
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 24 QGKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred cCCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 578888887788889999999998753
No 210
>PRK15371 effector protein YopJ; Provisional
Probab=20.39 E-value=2.2e+02 Score=22.82 Aligned_cols=42 Identities=17% Similarity=0.305 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccCCCCChhHHHHHhHHHHHH
Q 028772 118 GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQ 162 (204)
Q Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~yl~G~~~T~aD~~~~~~l~~~~ 162 (204)
-..+.++..++.||+.++.. .|+ -..++..|+-+.|.|....
T Consensus 23 ~~~~~L~~~i~~le~~~~~G--~~~-~~~~~~~Di~~lp~lv~~~ 64 (287)
T PRK15371 23 ISNEELKNIITQLEDDIADG--SWI-HKNYARTDLEVMPALVAQA 64 (287)
T ss_pred hhHHHHHHHHHHHHHHHHcC--CCC-CchhHHhhHHhhHHHHHHH
Confidence 34678999999999999964 666 4558999999999888755
No 211
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=20.37 E-value=1.4e+02 Score=22.88 Aligned_cols=16 Identities=6% Similarity=0.277 Sum_probs=12.7
Q ss_pred CCCchHHHHHHHHHhc
Q 028772 18 GDCPFSQRALLTLEEK 33 (204)
Q Consensus 18 ~~sp~~~~v~~~L~~~ 33 (204)
+.||||+|..--+...
T Consensus 117 p~CpyCkkl~~~l~~~ 132 (232)
T PRK10877 117 ITCGYCHKLHEQMKDY 132 (232)
T ss_pred CCChHHHHHHHHHHHH
Confidence 5999999988776553
No 212
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=20.31 E-value=2.9e+02 Score=18.73 Aligned_cols=62 Identities=15% Similarity=0.045 Sum_probs=35.2
Q ss_pred eEEeeeccCCCCCCCCCCchHHHHHHHH----HhcCCCceEEeecCCCC------chhhhhhCCCC-CccEEEe
Q 028772 3 VEICVKAAVGAPDILGDCPFSQRALLTL----EEKKVPYKRHLINISDK------PQWFMEISPEG-KVPVVKF 65 (204)
Q Consensus 3 ~~l~~~~~~~~~~~~~~sp~~~~v~~~L----~~~gi~~~~~~v~~~~~------~~~~~~~~p~g-~vP~L~~ 65 (204)
+.+++.++... ....+||.|+...-.+ ....-.+....++..+. ..++....--. .+|.+..
T Consensus 24 vvV~F~A~~~~-~~~~WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdvd~~~~w~d~~~~~~~~~~I~~~iPT~~~ 96 (119)
T cd02952 24 IFILFYGDKDP-DGQSWCPDCVKAEPVVREALKAAPEDCVFIYCDVGDRPYWRDPNNPFRTDPKLTTGVPTLLR 96 (119)
T ss_pred EEEEEEccCCC-CCCCCCHhHHhhchhHHHHHHHCCCCCEEEEEEcCCcccccCcchhhHhccCcccCCCEEEE
Confidence 34555655554 7778999999776544 33332356677776542 22333322223 7999964
Done!