BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028774
MVSEQTGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG
KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP
EELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL
VESFVTRHATPPASVSAASLYSSN

High Scoring Gene Products

Symbol, full name Information P value
AT5G19850 protein from Arabidopsis thaliana 1.6e-79
AT5G38520 protein from Arabidopsis thaliana 3.7e-18
AT4G36530 protein from Arabidopsis thaliana 7.0e-14
PPH
AT5G13800
protein from Arabidopsis thaliana 2.8e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028774
        (204 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2832896 - symbol:AT5G19850 species:3702 "Arabi...   799  1.6e-79   1
TAIR|locus:2159823 - symbol:AT5G38520 species:3702 "Arabi...   223  3.7e-18   1
TAIR|locus:2115440 - symbol:AT4G36530 species:3702 "Arabi...   185  7.0e-14   1
TAIR|locus:2159033 - symbol:PPH "AT5G13800" species:3702 ...   144  2.8e-08   1


>TAIR|locus:2832896 [details] [associations]
            symbol:AT5G19850 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016787 "hydrolase
            activity" evidence=ISS] InterPro:IPR000073 EMBL:CP002688
            GO:GO:0016787 PRINTS:PR00111 IPI:IPI00529562 RefSeq:NP_568381.1
            UniGene:At.31247 UniGene:At.66697 ProteinModelPortal:F4K2M9
            SMR:F4K2M9 PRIDE:F4K2M9 EnsemblPlants:AT5G19850.1 GeneID:832105
            KEGG:ath:AT5G19850 OMA:YTFETWG Uniprot:F4K2M9
        Length = 359

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 143/182 (78%), Positives = 165/182 (90%)

Query:     7 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKM 66
             GLVGLQAAV +PEICRG++L+NISLRMLHIKKQP+ GRP I+SFQNLLRNT  GKLF+K 
Sbjct:   178 GLVGLQAAVSKPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFFKS 237

Query:    67 VATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQ 126
             +A  E+V++ILCQCY+D+SQVT+ELVE IL+PGLE GA DVFLEFICYSGGPLPE+LLP 
Sbjct:   238 IAKPETVKSILCQCYHDSSQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEDLLPL 297

Query:   127 VKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 186
             VKCPVLIAWG+KDPWEPIELGRAY NFD+VEDF+VLP+ GHCPQDE P +VNPL+ESFV 
Sbjct:   298 VKCPVLIAWGEKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQDEKPEMVNPLIESFVA 357

Query:   187 RH 188
             RH
Sbjct:   358 RH 359


>TAIR|locus:2159823 [details] [associations]
            symbol:AT5G38520 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016787 "hydrolase
            activity" evidence=ISS] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009657 "plastid
            organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
            evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
            biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] EMBL:CP002688
            GO:GO:0009941 GO:GO:0016787 GO:GO:0009534 IPI:IPI00846134
            RefSeq:NP_001078682.1 UniGene:At.20746 ProteinModelPortal:F4KBJ3
            SMR:F4KBJ3 PRIDE:F4KBJ3 EnsemblPlants:AT5G38520.2 GeneID:833840
            KEGG:ath:AT5G38520 OMA:TPILLIW Uniprot:F4KBJ3
        Length = 374

 Score = 223 (83.6 bits), Expect = 3.7e-18, P = 3.7e-18
 Identities = 54/169 (31%), Positives = 88/169 (52%)

Query:    19 EICRGMILLNISLRMLHIKK-QPWYGR---PLIRSFQNLLRNTAAGKLFYKMVATSESVR 74
             ++ +G++LLN +  M +      W  +   PL+     LL+        +  V   E+++
Sbjct:   193 DLVKGLVLLNCAGGMNNKAVFDDWRIKLLMPLLLLIDFLLKQRGIASALFNRVKDRENLK 252

Query:    75 NILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIA 134
             NIL   Y +   V + LVE I  P    GA D F+  +    GP P +L+P++  PVL+ 
Sbjct:   253 NILTNVYGNKDNVDDTLVEIIAGPANTEGALDAFVSILTGPPGPNPIKLIPEITKPVLVL 312

Query:   135 WGDKDPWEPIE--LGRAYGNF-DSVEDF--IVLPNVGHCPQDEAPHLVN 178
             WGD+D   P++  +G+ + +  D + +F   VL  VGHCPQD+ P LV+
Sbjct:   313 WGDQDGLTPLDGPVGKYFTSLPDQLPNFNLYVLQGVGHCPQDDRPDLVH 361


>TAIR|locus:2115440 [details] [associations]
            symbol:AT4G36530 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0016787 "hydrolase activity" evidence=ISS]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0000023
            "maltose metabolic process" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] InterPro:IPR000639
            PRINTS:PR00412 InterPro:IPR000073 EMBL:CP002687 GO:GO:0009941
            GO:GO:0016787 PRINTS:PR00111 EMBL:AL161589 EMBL:Z99708 HSSP:O31243
            EMBL:AY087588 EMBL:AK227038 IPI:IPI00542770 PIR:C85431
            RefSeq:NP_195371.1 UniGene:At.4614 ProteinModelPortal:O23227
            SMR:O23227 STRING:O23227 MEROPS:S33.A01 PRIDE:O23227
            EnsemblPlants:AT4G36530.2 GeneID:829805 KEGG:ath:AT4G36530
            TAIR:At4g36530 InParanoid:O23227 OMA:FENLRRP PhylomeDB:O23227
            ProtClustDB:PLN02578 ArrayExpress:O23227 Genevestigator:O23227
            InterPro:IPR026129 PANTHER:PTHR10992:SF20 Uniprot:O23227
        Length = 378

 Score = 185 (70.2 bits), Expect = 7.0e-14, P = 7.0e-14
 Identities = 55/199 (27%), Positives = 90/199 (45%)

Query:     7 GLVGLQAAVMEPEICRGMILLNISLRML-HIKKQPWYGRPLIRSF-----QNLLRNTAAG 60
             G   L  AV  PE   G+ LLN + +     +K+      +I  F     + + +    G
Sbjct:   176 GFTALSVAVGLPEQVTGVALLNSAGQFAAESRKREEADETVITKFIVKPLKEIFQRVVLG 235

Query:    61 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLE----FICYSG 116
              LF++    S  + ++L   Y D++ V + LVE I +P  +  A +V+      F+    
Sbjct:   236 FLFWQAKQPSR-IESVLKSVYIDSTNVDDYLVESISKPATDPNAGEVYYRLMTRFLTNQS 294

Query:   117 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHL 176
                 + +L ++ CP+L+ WGD DPW           F S    + L   GHCP DE P  
Sbjct:   295 RYTLDSVLSKMTCPLLLVWGDLDPWVGPAKAEKIKAFYSNSSLVHL-QAGHCPHDEVPEA 353

Query:   177 VNPLVESFVTRH-ATPPAS 194
             VN  +  +++ + A+ PAS
Sbjct:   354 VNKALLDWLSINIASKPAS 372


>TAIR|locus:2159033 [details] [associations]
            symbol:PPH "AT5G13800" species:3702 "Arabidopsis
            thaliana" [GO:0016787 "hydrolase activity" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0015996 "chlorophyll
            catabolic process" evidence=RCA;IMP] [GO:0080124 "pheophytinase
            activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
            eggNOG:COG0596 EMBL:AB005230 GO:GO:0015996 EMBL:AY056386
            EMBL:AY070736 EMBL:AY149934 EMBL:AK317089 IPI:IPI00542352
            RefSeq:NP_196884.1 RefSeq:NP_850815.1 UniGene:At.23976
            ProteinModelPortal:Q9FFZ1 SMR:Q9FFZ1 MEROPS:S33.A34 PRIDE:Q9FFZ1
            EnsemblPlants:AT5G13800.1 EnsemblPlants:AT5G13800.2 GeneID:831225
            KEGG:ath:AT5G13800 TAIR:At5g13800 HOGENOM:HOG000006184
            InParanoid:Q9FFZ1 OMA:VGSFHYE PhylomeDB:Q9FFZ1
            ProtClustDB:CLSN2687043 BioCyc:ARA:AT5G13800-MONOMER
            BioCyc:MetaCyc:AT5G13800-MONOMER Genevestigator:Q9FFZ1
            GO:GO:0080124 Uniprot:Q9FFZ1
        Length = 484

 Score = 144 (55.7 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 51/198 (25%), Positives = 88/198 (44%)

Query:     7 GLVGLQAAVMEPEICRGMILLNIS---------LRMLHIKKQ-PWYGR-PLIRSFQNLLR 55
             G V L  A   P + +G+ LLN +         +R   + +  PW G  PL    + +  
Sbjct:   224 GYVALYFAATHPHLVKGVTLLNATPFWGFFPNPVRSPKLARLFPWPGAFPLPERVKKIT- 282

Query:    56 NTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYS 115
                  +L ++ ++  ES+  IL Q Y D S   +++  +I++      AA  F   +   
Sbjct:   283 -----ELVWQKISDPESIAEILKQVYTDHSINVDKVFSRIVEVTQHPAAAASFASIMLAP 337

Query:   116 GGPLP-EELLPQVK---CPVLIAWGDKDPW-EPIELGRAYGNFDSVEDFIVLPNVGHCPQ 170
             GG L   E L + K     + + +G +DPW  P+   +      +   + + P  GHCP 
Sbjct:   338 GGELSFSEALSRCKENNVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISP-AGHCPH 396

Query:   171 DEAPHLVNPLVESFVTRH 188
             DE P +VN L+  ++ +H
Sbjct:   397 DEVPEVVNYLMRGWI-KH 413


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      204       204   0.00094  111 3  11 22  0.49    32
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  174 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.14u 0.21s 19.35t   Elapsed:  00:00:01
  Total cpu time:  19.14u 0.21s 19.35t   Elapsed:  00:00:01
  Start:  Sat May 11 10:29:51 2013   End:  Sat May 11 10:29:52 2013

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