BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028774
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168)
GN=yugF PE=3 SV=1
Length = 273
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 7 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAA--GKLFY 64
G + L AA+ +PE+ ++LL S L RS ++ T L+
Sbjct: 105 GQISLSAALQKPELFSKVVLLCSS-------------GYLKRSHPTIIFGTHIPYFHLYI 151
Query: 65 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 124
K + E V L +D S + EE+++ +P + FI + G L E L
Sbjct: 152 KRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIRHREGDLEPEQL 211
Query: 125 PQVKCPVLIAWGDKDPWEPIELG-RAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPLVE 182
++ P L+ WG++D P+E+G R + + +SV L GH +E P L++ +
Sbjct: 212 KKMNKPALLIWGEEDRIVPMEIGKRLHADLPNSV--LYSLGQTGHLVPEERPELISEHIA 269
Query: 183 SFV 185
F+
Sbjct: 270 DFI 272
>sp|A4JPX5|MHPC_BURVG 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Burkholderia vietnamiensis (strain G4 / LMG
22486) GN=mhpC PE=3 SV=1
Length = 288
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 69 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFI-CYSGGP--LPE--EL 123
T E+++ +L D S +TEEL++ L+ L G D F+ + P P+
Sbjct: 167 TLENLKKMLNVFVYDASTMTEELMQTRLENML--GRRDHLENFVKSLTANPKQFPDYGHR 224
Query: 124 LPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVE 182
L ++K P L+ WG D + P+++G R N + D V GH Q E N +V
Sbjct: 225 LSEIKAPALVIWGRDDRFVPMDVGLRLVWNMPNA-DLHVFGRCGHWAQWEHAERFNRMVL 283
Query: 183 SFVTR 187
F+ R
Sbjct: 284 EFLRR 288
>sp|Q52532|MHPC_PSESP 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Pseudomonas sp. GN=mhpC PE=3 SV=1
Length = 283
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 71 ESVRNILCQCYNDTSQVTEELVEKILQPGLET-GAADVFLEFICYSGGPLP-EELLPQVK 128
E++R +L S +TEEL+ + + F+E + SGG LLP +
Sbjct: 165 ENLRKMLDIFVYAPSTLTEELINGRFENMMRRPEHLTNFVESLKASGGRANYAHLLPTLT 224
Query: 129 CPVLIAWGDKDPWEPIELG--RAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVT 186
P +I WG D + P++LG +G D+ + V GH Q E N LV +F+
Sbjct: 225 MPTMIIWGRDDRFVPLDLGLRMLWGMPDA--ELHVFSKCGHWAQWEHADKFNQLVLNFLA 282
Query: 187 R 187
R
Sbjct: 283 R 283
>sp|Q59695|ACOC_PSEPU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Pseudomonas putida GN=acoC PE=3 SV=1
Length = 370
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 64 YKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF-ICYSGGPLPEE 122
+ A +++ + Q + D + VT +++E +L+ G + + + + G
Sbjct: 247 FVAAANRNALKPQMVQLFADPALVTRQMLEDMLKFKRLEGVDEALRQLALAIADGDRQRH 306
Query: 123 LLPQV--KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPL 180
L V + P L+ WG KD P ++ + +VLP GH Q EA VN
Sbjct: 307 DLRSVLGQHPALVVWGGKDAIIPA----SHARKGPEAEVLVLPEAGHMVQMEAAEQVNQQ 362
Query: 181 VESFVTRH 188
+ +F+ +H
Sbjct: 363 MLAFLRKH 370
>sp|Q400K3|MHPC2_PSEPU 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase 2 OS=Pseudomonas putida GN=mhpC2 PE=3 SV=1
Length = 286
Score = 38.9 bits (89), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 69 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA-DVFLEFICYSGGPLPE--ELLP 125
T ++++ ++ D S +TEEL + L L D F+E + + P+ L
Sbjct: 165 TIDNLKKMMNVFVYDASDLTEELFQTRLDNMLSRHEHLDNFVESLAANPRQFPDFGSRLA 224
Query: 126 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 185
+++ P LI WG D + P++ G V N GH Q E N LV F+
Sbjct: 225 EIQAPTLIVWGRNDRFVPMDAGLRLLAGIPNSSLHVFNNCGHWAQWEHAEPFNRLVLDFL 284
>sp|B2JQW2|MHPC_BURP8 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=mhpC PE=3 SV=1
Length = 288
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 69 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEEL----- 123
T E+++ +L D S +TEEL++ L L A LE S P++
Sbjct: 167 TLENLKKMLNVFVYDASTMTEELMQTRLDNML---ARRDHLENFVKSLTANPKQFPDYGH 223
Query: 124 -LPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLV 181
L ++K P L+ WG D + P+++G R + E F V GH Q E N ++
Sbjct: 224 RLNEIKAPALVIWGRDDRFVPLDVGLRLVWGLPNAE-FHVFGRCGHWAQWEHAERFNQML 282
Query: 182 ESFV 185
F+
Sbjct: 283 LDFL 286
>sp|A6TAC7|MHPC_KLEP7 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=mhpC PE=3 SV=1
Length = 288
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 69 TSESVRNILCQCYNDTSQVTEELVEKILQPGL-ETGAADVFLEFICYSGGPLPE--ELLP 125
T E+++ ++ DT +TE L E L L D F++ + + P+ L
Sbjct: 166 TIENLKKMMSIFVFDTRDLTEALFEARLNNMLSRRDHLDNFVKSLEANPKQFPDFGPRLG 225
Query: 126 QVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 185
++ P LI WG D + P++ G + + + + GH Q E N LV +F+
Sbjct: 226 EISAPTLIVWGRNDRFVPMDAGLRLLAGIAGSELHIYRDCGHWAQWEHADSFNQLVLNFL 285
Query: 186 TR 187
R
Sbjct: 286 AR 287
>sp|P47229|BPHD_BURXL 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase OS=Burkholderia
xenovorans (strain LB400) GN=bphD PE=1 SV=1
Length = 286
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 61 KLFYKMVA--TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGP 118
KL +K+ A + E+++ +L D S +TEEL++ + ++ + I P
Sbjct: 154 KLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWE-AIQRQPEHLKNFLISAQKAP 212
Query: 119 LPE----ELLPQVKCPVLIAWGDKDPWEPIELG-RAYGNFDSVEDFIVLPNVGHCPQDEA 173
L L ++K I WG D + P++ G + N D V GH Q E
Sbjct: 213 LSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDAR-LHVFSKCGHWAQWEH 271
Query: 174 PHLVNPLVESFVTRHA 189
N LV F+ RHA
Sbjct: 272 ADEFNRLVIDFL-RHA 286
>sp|P87056|YDJ8_SCHPO Abhydrolase domain-containing protein C57A10.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC57A10.08c PE=3 SV=2
Length = 364
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 128 KCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTR 187
KCP+LI +G+ DP ++ + ++ F + + GHC E P V ++SF+ +
Sbjct: 298 KCPILILFGEFDPVSSLKDKVFFQDYPGNYTFKEI-DTGHCSMLEQPSEVYNCIDSFLDK 356
Query: 188 HATPPASV 195
+T ++
Sbjct: 357 FSTTDHNI 364
>sp|Q49KF8|MHPC1_PSEPU 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase 1 OS=Pseudomonas putida GN=mhpC1 PE=3 SV=2
Length = 285
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 69 TSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPE-----EL 123
T E+++ ++ DTS +TEEL + L L D F L +
Sbjct: 164 TIENLKKMMSIFVYDTSDLTEELFQTRLDNML--ARKDHLENFTASLAANLKQFPDFGHR 221
Query: 124 LPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVES 183
L ++ L+ WG D + P++ G S V GH Q E N +V
Sbjct: 222 LGEINAETLVIWGRNDRFVPLDTGLRLVAGISNSQLHVFNKCGHWAQWEHADTFNRMVLD 281
Query: 184 FVTR 187
F+T
Sbjct: 282 FLTH 285
>sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2
Length = 362
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 84 TSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP 143
T++ E + QPG +G + + +S PL + V P L+ WG+ D +
Sbjct: 257 TTEDLEAYIYVFSQPGALSGPINHYRNI--FSCLPLKHHM---VTTPTLLLWGENDAFME 311
Query: 144 IELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPHLVNPLVESFV 185
+E+ + + +L H Q + P +VN L+ +F+
Sbjct: 312 VEMAEVTKIYVKNYFRLTILSEASHWLQQDQPDIVNKLIWTFL 354
>sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2
Length = 359
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 7 GLVGLQAAVMEPEICRGMILLNI---SLRMLHIKKQP-------WYGRPLIRSFQNLLRN 56
G++ AV PE+ +I++N S+ +I + P +Y I F + +
Sbjct: 170 GMIAWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPAQLFRSSFYYFFQIPRFPEFMFS 229
Query: 57 TAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSG 116
K K + TS+S I + T++ E V QPG +G + + +S
Sbjct: 230 INDFKAL-KHLFTSQST-GIGRKGRQLTTEDLEAYVYVFSQPGALSGPINHYRNI--FSC 285
Query: 117 GPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNF-DSVEDFIVLPNVGHCPQDEAPH 175
PL + V P L+ WG++D + +E+ + + +L H Q + P
Sbjct: 286 LPLKHHM---VTTPTLLLWGEEDAFMEVEMAEVTKIYVKNYFRLTILSEGSHWLQQDQPD 342
Query: 176 LVNPLVESFV 185
+VN L+ +F+
Sbjct: 343 IVNGLIWAFL 352
>sp|Q02104|LIP1_PSYIM Lipase 1 OS=Psychrobacter immobilis GN=lip1 PE=1 SV=2
Length = 317
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 17/103 (16%)
Query: 71 ESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCP 130
+SV+ + Q ++ +++E+I+ +E A +++ Q K P
Sbjct: 213 KSVKAVFAQERIKNKELDAKILEQIVTDNVEERA-----------------KIIAQYKIP 255
Query: 131 VLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 173
L+ WGDKD E I++ +VGH P EA
Sbjct: 256 TLVVWGDKDQIIKPETVNLIKKIIPQAQVIMMEDVGHVPMVEA 298
>sp|Q0WLB5|CLAH2_ARATH Clathrin heavy chain 2 OS=Arabidopsis thaliana GN=CHC2 PE=1 SV=1
Length = 1703
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 85 SQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPI 144
+Q+ E LV ++ + A FLE I S + L VK +++ K+P
Sbjct: 1128 AQLREGLVSDAIESFIRADDATHFLEVIRVSEDTDVYDDL--VKYLLMVRQKVKEPKVDS 1185
Query: 145 ELGRAYGNFD---SVEDFIVLPNVGHCPQ------DEAPHLVNPLVESFVT 186
EL AY D +E+FI++PNV + DEA + ++ +F++
Sbjct: 1186 ELIYAYAKIDRLGEIEEFILMPNVANLQHVGDRLYDEALYEAAKIIYAFIS 1236
>sp|Q9BIB3|PPME1_CAEEL Probable protein phosphatase methylesterase 1 OS=Caenorhabditis
elegans GN=B0464.9 PE=3 SV=1
Length = 364
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 144 IELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPASVSA 197
+ +G+ G F + VLP VGHC Q+++P + V F RH SA
Sbjct: 297 LTIGQMQGKFQTC----VLPKVGHCVQEDSPQNLADEVGRFACRHRIAQPKFSA 346
>sp|O06734|YISY_BACSU AB hydrolase superfamily protein YisY OS=Bacillus subtilis (strain
168) GN=yisY PE=3 SV=1
Length = 268
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 85 SQVTEELVEKILQPGLETGAADVFLEFICY----SGGPLPEELLPQ----VKCPVLIAWG 136
+ + ++ EK + P L ++ LE Y SG L +E L + +K P LI G
Sbjct: 158 ADLGKQFFEKKVSPELRQWFLNLMLEASSYGTIHSGIALRDEDLRKELAAIKVPTLILHG 217
Query: 137 DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESF 184
KD P + + + + N GH E +N L+ F
Sbjct: 218 RKDRIAPFDFAKELKRGIKQSELVPFANSGHGAFYEEKEKINSLIAQF 265
>sp|B1KM44|BIOH_SHEWM Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Shewanella
woodyi (strain ATCC 51908 / MS32) GN=bioH PE=3 SV=1
Length = 256
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 62/165 (37%), Gaps = 12/165 (7%)
Query: 7 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP--LIRSFQNLLRNTAAGKLFY 64
GLV +AA+ PE RG++ + S + + + W G P ++ F L+ GK
Sbjct: 83 GLVATKAALRYPEQVRGLVTIASSPCFMAREDESWPGIPPQVLSQFSTQLQQNI-GKTIE 141
Query: 65 KMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELL 124
+ +A D Q+ E ++ + L LE I L
Sbjct: 142 RFLAIQVMGS---ATAKEDIKQLKELVLSRPLPKNSALAQGLKMLENIDLRAQ------L 192
Query: 125 PQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCP 169
PQ++ P L WG D P + N + ++LP H P
Sbjct: 193 PQIEQPWLRVWGRLDGLVPRRVPPLMPNHQAHFTDLLLPKASHAP 237
>sp|Q86WA6|BPHL_HUMAN Valacyclovir hydrolase OS=Homo sapiens GN=BPHL PE=1 SV=1
Length = 291
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 106 DVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEP 143
D +F G + LLP+V+CP LI G+KDP P
Sbjct: 211 DGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVP 248
>sp|B3QP81|KTHY_CHLP8 Thymidylate kinase OS=Chlorobaculum parvum (strain NCIB 8327)
GN=tmk PE=3 SV=1
Length = 217
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 10/50 (20%)
Query: 70 SESVRNILCQCYNDTSQVTE---------ELVEKILQPGLETGAADVFLE 110
+E +R +L + +ND + + E EL+EKI+ P LE G DV L+
Sbjct: 43 AEQIRELLLESHNDITSIAELLLFSASRAELMEKIIVPALEDG-CDVILD 91
>sp|Q06SF0|PSAB_STIHE Photosystem I P700 chlorophyll a apoprotein A2 OS=Stigeoclonium
helveticum GN=psaB PE=3 SV=1
Length = 735
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 151 GNFDS-VEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPASVSAASLY 201
GNF+ V+D + + + H D PH P VE+F AT P +++ + +Y
Sbjct: 73 GNFEQWVQDPLHVRPIAHAIWD--PHFGQPAVEAFTRGGATGPVNIATSGVY 122
>sp|Q6PIF2|SYCE2_HUMAN Synaptonemal complex central element protein 2 OS=Homo sapiens
GN=SYCE2 PE=2 SV=2
Length = 218
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 35 HIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEK 94
+I K L+ +F+N L+ K+ +E + + Q YND +++ +E +++
Sbjct: 80 NINKSRQKDHALMTNFRNSLKT--------KVSDLTEKLEERIYQIYNDHNKIIQEKLQE 131
Query: 95 ILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 136
Q + + L+ +C+S + ++L Q + + + WG
Sbjct: 132 FTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLRLRWG 173
>sp|Q70Y04|PSAB_AMBTC Photosystem I P700 chlorophyll a apoprotein A2 OS=Amborella
trichopoda GN=psaB PE=3 SV=1
Length = 734
Score = 31.2 bits (69), Expect = 4.7, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 151 GNFDS-VEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPASVSAASLY 201
GNF+S V+D + + + H D PH P VE+F A P +++ + LY
Sbjct: 72 GNFESWVQDPLHVRPIAHAIWD--PHFGQPAVEAFTRGGALGPVNIAYSGLY 121
>sp|Q57626|Y162_METJA Uncharacterized protein MJ0162 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0162 PE=3 SV=1
Length = 421
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 55 RNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF--- 111
R+T YK ++ NI C Y + Q+TE + K G G+A ++LE
Sbjct: 87 RDTLNLTKAYKEEDIQHAMENIECLNYYEERQITENIKFKFYNAGHILGSASIYLEVDGK 146
Query: 112 -ICYSG 116
I Y+G
Sbjct: 147 KILYTG 152
>sp|Q8R164|BPHL_MOUSE Valacyclovir hydrolase OS=Mus musculus GN=Bphl PE=2 SV=1
Length = 291
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 117 GPLPEELLPQVKCPVLIAWGDKDPWEP 143
G + LLP V+CP LI G+KDP P
Sbjct: 222 GNICRHLLPLVQCPTLIVHGEKDPLVP 248
>sp|P24640|LIP3_MORS1 Lipase 3 OS=Moraxella sp. (strain TA144) GN=lip3 PE=1 SV=1
Length = 315
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 17/103 (16%)
Query: 71 ESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCP 130
+SV+ + Q + + +++E+I+ +E A +++ + P
Sbjct: 213 KSVKAVFAQERINNKALDTKILEQIVTDNVEERA-----------------KIIAKYNIP 255
Query: 131 VLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEA 173
L+ WGDKD E I++ +VGH P EA
Sbjct: 256 TLVVWGDKDQVIKPETTELIKEIIPQAQVIMMNDVGHVPMVEA 298
>sp|Q9BYX4|IFIH1_HUMAN Interferon-induced helicase C domain-containing protein 1 OS=Homo
sapiens GN=IFIH1 PE=1 SV=3
Length = 1025
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 36 IKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVAT--SESVRNILCQCYNDTSQVTEELVE 93
++K+ W+ +F N+LR T +L ++ + SES I D QV E+L+
Sbjct: 172 VQKENWFS-----AFLNVLRQTGNNELVQELTGSDCSESNAEIENLSQVDGPQVEEQLLS 226
Query: 94 KILQPGLE 101
+QP LE
Sbjct: 227 TTVQPNLE 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,445,789
Number of Sequences: 539616
Number of extensions: 3196063
Number of successful extensions: 6778
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 6764
Number of HSP's gapped (non-prelim): 33
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)