BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028777
MASENSSSMSSLASQICNQIASIFSKPTAPHPPPLDIMVAELTNTATQKGSVFLYGVGRE
GLMLKALCMRLAHLGISTHLVFDMTTPPISSNDLLIASAGPGGFSTVDAICSRARSYGAR
VLLLTAQPESGSSVKHASVVAYVPAQTMADDDDEQGKEKSRPLMPMGSVYEGAMFVLFEM
VVYKLGEALGQSPEAVRSRHTNLE

High Scoring Gene Products

Symbol, full name Information P value
AT5G52190 protein from Arabidopsis thaliana 7.2e-68
MCA2738
Putative hexulose-6-phosphate synthase/SIS domain protein
protein from Methylococcus capsulatus str. Bath 7.6e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028777
        (204 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2145136 - symbol:AT5G52190 species:3702 "Arabi...   689  7.2e-68   1
UNIPROTKB|Q603R2 - symbol:MCA2738 "Putative hexulose-6-ph...   185  7.6e-14   1


>TAIR|locus:2145136 [details] [associations]
            symbol:AT5G52190 species:3702 "Arabidopsis thaliana"
            [GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
            [GO:0030246 "carbohydrate binding" evidence=IEA;ISS]
            InterPro:IPR001347 Pfam:PF01380 PROSITE:PS51464 EMBL:CP002688
            GO:GO:0005975 GO:GO:0030246 GO:GO:0016853 EMBL:AB025603
            EMBL:BT024597 IPI:IPI00537088 RefSeq:NP_200032.1 UniGene:At.29629
            HSSP:P42404 ProteinModelPortal:Q9LTK1 SMR:Q9LTK1 PRIDE:Q9LTK1
            EnsemblPlants:AT5G52190.1 GeneID:835295 KEGG:ath:AT5G52190
            TAIR:At5g52190 InParanoid:Q9LTK1 OMA:EDCLIAI PhylomeDB:Q9LTK1
            ProtClustDB:CLSN2687462 Genevestigator:Q9LTK1 Uniprot:Q9LTK1
        Length = 208

 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 136/208 (65%), Positives = 164/208 (78%)

Query:     1 MAXXXXXXXXXXXXQICNQIASIFSKPTAPHPPPLDIMVAELTNTATQKGS--VFLYGVG 58
             MA            QICNQI+S+F+KPT+P+PPPLD++V ELT  +  + +  +FLYGVG
Sbjct:     1 MANEKAQEMANLSSQICNQISSVFTKPTSPYPPPLDLLVTELTAISRNRNNSRIFLYGVG 60

Query:    59 REGLMLKALCMRLAHLGISTHLVFDMTTPPISSNDLLIASAGPGGFSTVDAICSRARSYG 118
             REGLMLKA  MRL H G+ THLVFDMTTPPISS+DLLIASAGPGGFSTVDA+CS A+S G
Sbjct:    61 REGLMLKAFAMRLFHFGLPTHLVFDMTTPPISSSDLLIASAGPGGFSTVDALCSVAKSNG 120

Query:   119 ARVLLLTAQPESGSSVKHASVVAYVPAQTMADDDD--EQGKEKSRPLMPMGSVYEGAMFV 176
             A+V+L+TA+P  GS VKHA+ V YVPAQTMA D+   +  +   R L+PMGSVYEGA+FV
Sbjct:   121 AKVILITAEPAIGSCVKHATDVCYVPAQTMASDNGGGDSVEMGERRLLPMGSVYEGALFV 180

Query:   177 LFEMVVYKLGEALGQSPEAVRSRHTNLE 204
             LFEMVVYKLGE LG+S E+VR+RHTNLE
Sbjct:   181 LFEMVVYKLGEVLGESSESVRARHTNLE 208


>UNIPROTKB|Q603R2 [details] [associations]
            symbol:MCA2738 "Putative hexulose-6-phosphate synthase/SIS
            domain protein" species:243233 "Methylococcus capsulatus str. Bath"
            [GO:0016832 "aldehyde-lyase activity" evidence=ISS] [GO:0019647
            "formaldehyde assimilation via ribulose monophosphate cycle"
            evidence=ISS] InterPro:IPR001347 InterPro:IPR001754
            InterPro:IPR011060 InterPro:IPR013785 InterPro:IPR017552
            InterPro:IPR017553 Pfam:PF00215 Pfam:PF01380 PROSITE:PS51464
            SMART:SM00934 Gene3D:3.20.20.70 GO:GO:0005975 GO:GO:0030246
            GO:GO:0016853 SUPFAM:SSF51366 EMBL:AE017282
            GenomeReviews:AE017282_GR GO:GO:0006207 GO:GO:0016832 GO:GO:0004590
            GO:GO:0043801 GO:GO:0019647 TIGRFAMs:TIGR03128 RefSeq:YP_115138.1
            ProteinModelPortal:Q603R2 GeneID:3103498 KEGG:mca:MCA2738
            PATRIC:22609346 HOGENOM:HOG000073935 KO:K13831 OMA:AMIGANK
            ProtClustDB:CLSK494276 TIGRFAMs:TIGR03127 Uniprot:Q603R2
        Length = 389

 Score = 185 (70.2 bits), Expect = 7.6e-14, P = 7.6e-14
 Identities = 52/165 (31%), Positives = 79/165 (47%)

Query:    40 AELTNTATQKGSVFLYGVGREGLMLKALCMRLAHLGISTHLVFDMTTPPISSNDLLIASA 99
             A LT    +   +F+ G GR GL+ +   MRL H G   ++V ++ TP I   DLLI  +
Sbjct:   235 ARLTGLLERARRIFVAGAGRSGLVGRFFAMRLMHGGYQAYIVGEIVTPSIRQGDLLIVIS 294

Query:   100 GPGGFSTVDAICSRARSYGARVLLLTAQPESGSSVKHASVVAYVPAQTMADDDDEQGKEK 159
             G G   T+ A   +A+  GA + L+T + +S      A VV  +         ++ GK  
Sbjct:   295 GSGETETMIAYAKKAKEQGASIALITTRDKSTIG-DMADVVFRIGTP------EQYGKVV 347

Query:   160 SRPLMPMGSVYEGAMFVLFEMVVYKLGEALGQSPEAVRSRHTNLE 204
                 MPMG+ +E +  VL E  +  +        E +R+RH NLE
Sbjct:   348 G---MPMGTTFELSTLVLLEATISHIIHTKKIPEEQMRTRHANLE 389


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      204       192   0.00096  110 3  11 22  0.46    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  557 (59 KB)
  Total size of DFA:  137 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.86u 0.11s 18.97t   Elapsed:  00:00:00
  Total cpu time:  18.86u 0.11s 18.97t   Elapsed:  00:00:00
  Start:  Sat May 11 10:39:37 2013   End:  Sat May 11 10:39:37 2013

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