BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028784
(204 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 61 PKKITKED--ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXX 118
P ++T+E E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 301 PDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 360
Query: 119 XXXXXQDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDE 178
+F M AF +F+ + G I+ L+ ++ LG+ + +E
Sbjct: 361 GTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 420
Query: 179 CVAMIQVFDTDGNGVLDYHEFSQMMA 204
MI+ D DG+G ++Y EF QMM
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMMT 446
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 61 PKKITKED--ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXX 118
P ++T+E E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 301 PDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 360
Query: 119 XXXXXQDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDE 178
+F M AF +F+ + G I+ L+ ++ LG+ + +E
Sbjct: 361 GTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 420
Query: 179 CVAMIQVFDTDGNGVLDYHEFSQMMA 204
MI+ D DG+G ++Y EF QMM
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMMT 446
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 338 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 397
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 398 DGDGQVNYEEFVQMMT 413
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 344 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 403
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 404 NYEEFVQM 411
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 338 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 397
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 398 DGDGQVNYEEFVQMMT 413
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 344 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 403
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 404 NYEEFVQM 411
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 335 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 394
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 395 DGDGQVNYEEFVQMMT 410
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 341 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 400
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 401 NYEEFVQM 408
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 438 NYEEFVQM 445
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 373 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 432
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 433 DGDGQVNYEEFVQMMT 448
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 379 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 438
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 439 NYEEFVQM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 438 NYEEFVQM 445
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 371 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 430
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 431 DGDGQVNYEEFVQMMT 446
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 377 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 436
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 437 NYEEFVQM 444
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 372 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I ++F
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
Query: 127 TRM 129
+M
Sbjct: 443 VQM 445
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 372 MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I ++F
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
Query: 127 TRM 129
+M
Sbjct: 443 VQM 445
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 372 MMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 431
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 432 DGDGQVNYEEFVQMMT 447
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 438 NYEEFVQM 445
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 67 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 126
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 127 DGDGQVNYEEFVQMMT 142
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 73 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 121
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 75 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 134
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 135 DGDGQVNYEEFVQMMT 150
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 81 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 129
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 75 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 70 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 129
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 130 DGDGQVNYEEFVQMMT 145
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 76 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 124
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 77 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 136
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 137 DGDGQVNYEEFVQMMT 152
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 83 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 131
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 125
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMI 126
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 75 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 68 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 127
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 128 DGDGQVNYEEFVQMMT 143
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 74 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 122
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 73 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 132
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 133 DGDGQVNYEEFVQMMT 148
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 79 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 127
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMI 126
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMI 125
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 69 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 129 DGDGQVNYEEFVQMMT 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 75 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E R + +F
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLG 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G ++ L+ ++ RLG+ S +E MI+ DT
Sbjct: 71 MMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADT 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF +++
Sbjct: 131 DGDGQVNYEEFVRVLV 146
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G +SA ELR +GE +S EE I
Sbjct: 77 KDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQV 136
Query: 122 XXQDFTRM 129
++F R+
Sbjct: 137 NYEEFVRV 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 125
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 132 DGDGQVNYEEFVQMMT 147
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 125
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ + G I+ L+ ++ LG+ + DE MI+ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF +MM
Sbjct: 131 DGDGHINYEEFVRMMV 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ + G I+ L+ ++ LG+ + DE MI+ D
Sbjct: 71 LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF +MM
Sbjct: 131 DGDGHINYEEFVRMMV 146
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 60 EPKK--ITKED--ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXX 115
EP + +T+E E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 290 EPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 349
Query: 116 XXXXXXXXQDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKS 175
+F M AF +F+ + G I+ L+ ++ LG+ +
Sbjct: 350 DGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 409
Query: 176 YDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
+E MI+ D DG+G ++Y EF QMM
Sbjct: 410 DEEVDEMIREADIDGDGQVNYEEFVQMMT 438
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ +
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 131 DGDGQVNYEEFVQMMT 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQV 136
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 137 NYEEFVQM 144
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 LMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 189 DGNGVLDYHEFSQMM 203
DG+G ++Y EF Q+M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF +MA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E++LK+ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF MM
Sbjct: 131 DGDGQVNYEEFVTMMT 146
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF MM
Sbjct: 131 DGDGQVNYEEFVTMMT 146
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 189 DGNGVLDYHEFSQMM 203
DG+G ++Y EF Q+M
Sbjct: 131 DGDGQVNYEEFVQVM 145
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF +MA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+ELK+ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 68 LMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 127
Query: 189 DGNGVLDYHEFSQMM 203
DG+G ++Y EF Q+M
Sbjct: 128 DGDGQVNYEEFVQVM 142
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF +MA
Sbjct: 12 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 70
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+ELK+ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 74 KDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 122
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF MM
Sbjct: 132 DGDGQVNYEEFVTMMT 147
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF MM
Sbjct: 132 DGDGQVNYEEFVTMMT 147
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDI 131
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF MM
Sbjct: 132 DGDGQVNYEEFVTMMT 147
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF +F+ ++ G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 189 DGNGVLDYHEFSQMM 203
DG+G ++Y EF ++M
Sbjct: 132 DGDGQINYEEFVKVM 146
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + GCIT K L ++ LG + + E MI D DGNG +D+ EF +MA
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+ELK+ FR FD D +G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF +F+ ++ G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 72 LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131
Query: 189 DGNGVLDYHEFSQMM 203
DG+G ++Y EF ++M
Sbjct: 132 DGDGQINYDEFVKVM 146
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + GCIT K L ++ LG + + E MI D DGNG +D+ EF +MA
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 74
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+ELK+ FR FD D +G ISA ELR ++GE ++ EE I
Sbjct: 78 KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+++ F FD DG G I A EL+ ++G EE + I ++F +
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQ 68
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ ++ G I+ K L+R+ LG++ + +E MI D
Sbjct: 69 MMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADR 128
Query: 189 DGNGVLDYHEFSQMM 203
DG+G ++ EF ++M
Sbjct: 129 DGDGEVNEEEFFRIM 143
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
+ K+ F FD DGDG I+ EL S+ + + EE + I +F
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ ++ G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 LMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 130
Query: 189 DGNGVLDYHEFSQMM 203
DG+G ++Y EF +MM
Sbjct: 131 DGDGQVNYEEFVKMM 145
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + GCIT + L ++ L + + +E MI D DGNG +++ EF +MA
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXX 117
A + K E+ELK+ F+ FD D +G ISA ELR ++GE ++ EE I
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG 132
Query: 118 XXXXXXQDFTRM 129
++F +M
Sbjct: 133 DGQVNYEEFVKM 144
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ +
Sbjct: 67 MMARKMKDTDSEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI 125
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF QMM
Sbjct: 126 DGDGQVNYEEFVQMMT 141
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 63 KITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXX 122
K T +E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 73 KDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVN 132
Query: 123 XQDFTRM 129
++F +M
Sbjct: 133 YEEFVQM 139
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD +G GKI+ EL ++G+ + E + I +F
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCG 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ + G I+P L+ ++ LG+ + +E MI+ D
Sbjct: 71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADF 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G+++Y EF M++
Sbjct: 131 DGDGMINYEEFVWMIS 146
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
A + ++ E+E+++ F+ FD DGDG IS ELR ++GE ++ EE I
Sbjct: 73 AKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMI 125
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 2/136 (1%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G I+ L+ ++ LG+ + +E MI+ D
Sbjct: 71 MMARKMKDSEEEIRE--AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 128
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y EF MM
Sbjct: 129 DGDGQVNYEEFVTMMT 144
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 80 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 123
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+++ F FD DG G I EL+ ++G EE + I DF
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ ++ G I+ K L+R+ LG++ + +E MI D
Sbjct: 67 VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADR 126
Query: 189 DGNGVLDYHEFSQMM 203
DG+G + EF ++M
Sbjct: 127 DGDGEVSEQEFLRIM 141
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ +L S+G+ + E + I F
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT 371
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F + G I+ L+ ++ LG+ + +E MI+
Sbjct: 372 MMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGI 431
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++Y +F QMM
Sbjct: 432 DGDGQVNYEQFVQMMT 447
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR F DG+G ISA +LR ++GE ++ EE I
Sbjct: 378 KDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMI 426
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+++ F FD DG G I A EL+ ++G EE + I ++F
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
M AF +F+ + G IT K L+R+ LG++ + +E MI D
Sbjct: 89 MMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADR 148
Query: 189 DGNGVLDYHEFSQMM 203
+ + +D EF ++M
Sbjct: 149 NDDNEIDEDEFIRIM 163
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+E+ + FR FD D G I+ +LR +GE ++ EE + I
Sbjct: 101 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMI 143
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + GCIT K L ++ LG + + E MI D DGNG +D+ EF +MA
Sbjct: 15 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF + + EKKG I L+ +L LGD + DE MI DTDG+G +DY EF +M
Sbjct: 12 AFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCLM 69
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
AF +F+ + G I+ L+ + LG+ + +E I+ D
Sbjct: 71 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADI 130
Query: 189 DGNGVLDYHEFSQ 201
DG+G ++Y EF Q
Sbjct: 131 DGDGQVNYEEFVQ 143
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
A + K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 73 ARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXI 125
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G+ + E + I +F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
AF +F+ + G I+ L+ + LG+ + +E I+ D
Sbjct: 72 XXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADI 131
Query: 189 DGNGVLDYHEFSQ 201
DG+G ++Y EF Q
Sbjct: 132 DGDGQVNYEEFVQ 144
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
A + K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 74 ARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXI 126
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+ + F FD + DG + EL+ ++G + E I DF
Sbjct: 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYI 83
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ + G I+ K L+R+ LG++ + +E AMI+ FD
Sbjct: 84 VMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDL 143
Query: 189 DGNGVLDYHEF 199
DG+G ++ +EF
Sbjct: 144 DGDGEINENEF 154
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 53
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD DGDG I+ EL S+G + E + I +F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLT 70
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
AF +F+ + G I+ L+ + LG+ + +E I+ D
Sbjct: 71 XXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADI 130
Query: 189 DGNGVLDYHEFSQ 201
DG+G ++Y EF Q
Sbjct: 131 DGDGQVNYEEFVQ 143
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXI 125
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 25 AFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K F FD DG G IS L +G+ + EE A I
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAII 62
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G IT K L ++ LG + + E MI D DG+G +D+ EF MMA
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 73
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K+ F FD DGDG I+ EL S+G+ + E + I
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 52
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+ + F FD + DG + EL+ ++G + E I DF
Sbjct: 24 EIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYI 83
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ + G I+ K L+R+ LG++ + +E A I+ FD
Sbjct: 84 VXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDL 143
Query: 189 DGNGVLDYHEF 199
DG+G ++ +EF
Sbjct: 144 DGDGEINENEF 154
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 80
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD DG G IS EL +G+ + EE A I ++F
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 129 MXXXXXXXXX---XXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQV 185
M F +F+ G I + L + G+ + +E ++++
Sbjct: 78 MMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
Query: 186 FDTDGNGVLDYHEFSQMM 203
D + +G +D+ EF +MM
Sbjct: 138 GDKNNDGRIDFDEFLKMM 155
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARA 108
E K E+EL ++FR FD + DG I A EL F + GE+++ EE +
Sbjct: 85 EDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIES 133
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 83
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K F FD DG G IS EL +G+ + EE A I
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII 62
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 83
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD DG G IS EL +G+ + EE A I ++F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 129 MXXXXXXXXX---XXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQV 185
M F +F+ G I + L +L G+ + ++ +++
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 186 FDTDGNGVLDYHEFSQMM 203
D + +G +D+ EF +MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
E K E+EL FR FD + DG I EL + GE+++ E+
Sbjct: 88 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 83
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD DG G IS EL +G+ + EE A I ++F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 129 MXXXXXXXXX---XXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQV 185
M F +F+ G I + L +L G+ + ++ +++
Sbjct: 81 MMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 186 FDTDGNGVLDYHEFSQMM 203
D + +G +D+ EF +MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
E K E+EL FR FD + DG I EL + GE+++ E+
Sbjct: 88 EDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 80
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD DG G IS EL +G+ + EE A I ++F
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 129 MXXXXXXXXX---XXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQV 185
M F +F+ G I + L + G+ + +E ++++
Sbjct: 78 MMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
Query: 186 FDTDGNGVLDYHEFSQMM 203
D + +G +D+ EF +MM
Sbjct: 138 GDKNNDGRIDFDEFLKMM 155
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARA 108
E K E+EL + FR FD + DG I A EL F + GE+++ EE +
Sbjct: 85 EDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIES 133
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 83
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD DG G IS EL +G+ + EE A I ++F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 129 MXXXXXXXXX---XXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQV 185
M F +F+ G I + L +L G+ + ++ +++
Sbjct: 81 MMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 186 FDTDGNGVLDYHEFSQMM 203
D + +G +D+ EF +MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
E K E+EL+ FR FD + DG I EL + GE+++ E+
Sbjct: 88 EDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 83
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 3/138 (2%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD DG G IS EL +G+ + EE A I ++F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 129 MXXXXXXXXX---XXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQV 185
M F +F+ G I + L +L G+ ++ +++
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKD 140
Query: 186 FDTDGNGVLDYHEFSQMM 203
D + +G +D+ EF +MM
Sbjct: 141 SDKNNDGRIDFDEFLKMM 158
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
E K E+EL FR FD + DG I EL + GE++ E+
Sbjct: 88 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 22 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 80
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K F FD DG G IS EL +G+ + EE A I ++F
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 129 MXXXXXXXXX---XXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQV 185
M F +F+ G I + L +L G+ + ++ +++
Sbjct: 78 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 137
Query: 186 FDTDGNGVLDYHEFSQMM 203
D + +G +D+ EF +MM
Sbjct: 138 SDKNNDGRIDFDEFLKMM 155
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
E K E+EL FR FD + DG I EL + GE+++ E+
Sbjct: 85 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +++ + G IT K L ++ LG + + E MI D DGNG +D+ EF MMA
Sbjct: 15 AFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIG 98
E K+ F +D DGDG I+ EL S+G
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLG 40
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + +E A+I+ D DG+G +D+ EF MM
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV 72
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E K F FD DG G IS EL +G+ + EE A I
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII 51
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F+ + G I+ L+ ++ LG+ + DE MI+ D DG+G ++Y EF +MM
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 71
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K+ E+EL + F+ FD DG+G ISA ELR ++GE ++ +E I
Sbjct: 2 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 61
Query: 122 XXQDFTRM 129
++F RM
Sbjct: 62 NYEEFVRM 69
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + GCIT + L ++ L + + +E MI D DGNG +++ EF +MA
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + GCIT + L ++ L + + +E MI D DGNG +++ EF +MA
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F+ D D DG IS ++RA F S+G + +E + + F
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTM----FLT 113
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF +F+ E G + L+R L G+ S DE +
Sbjct: 114 IFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPI 172
Query: 189 DGNGVLDYHEFSQMMA 204
DGNG++D +F+Q++
Sbjct: 173 DGNGLIDIKKFAQILT 188
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + GCI+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + GCI+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + GCI+ K L +++ LG + + +E MI D DG+G +D+ E+ MMA
Sbjct: 23 AFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMA 82
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF QMM
Sbjct: 11 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 69
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I ++F
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 127 TRM 129
+M
Sbjct: 65 VQM 67
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF QMM
Sbjct: 14 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 72
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 3 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 62
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 63 NYEEFVQM 70
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF QMM
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 68
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I ++F
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 127 TRM 129
+M
Sbjct: 64 VQM 66
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF QMM
Sbjct: 13 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 71
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 61
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 62 NYEEFVQM 69
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF QMM
Sbjct: 7 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 65
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I ++F
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 127 TRM 129
+M
Sbjct: 61 VQM 63
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF +F+ + G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF QMM
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+E+++ FR FD DG+G ISA ELR ++GE ++ EE I ++F
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 127 TRM 129
+M
Sbjct: 64 VQM 66
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+++ F FD DG G I EL+ ++G EE + I DF
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLT 91
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ ++ G I+ K L+R+ LG++ + +E I D
Sbjct: 92 VXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADR 151
Query: 189 DGNGVLDYHEF 199
DG+G + EF
Sbjct: 152 DGDGEVSEQEF 162
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 63 KITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXX 122
K TKE+ LK F+ FD D GKIS L+ +GE ++ EE + I
Sbjct: 100 KDTKEEILK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVS 158
Query: 123 XQDFTRM 129
Q+F R+
Sbjct: 159 EQEFLRI 165
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F+ + G I K L+ + LG +E MI D DG+G +D+ EF MM
Sbjct: 35 AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMT 93
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E+++ F FD DG G I A EL+ ++G EE + I
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI 72
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +F+ + G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y +F QMM
Sbjct: 12 AFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMMT 70
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+E+++ FR FD DG+G ISA +LR ++GE ++ EE I +DF
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Query: 127 TRM 129
+M
Sbjct: 66 VQM 68
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF++F+ ++ G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF +MM
Sbjct: 14 AFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+ELK+ F+ FD D +G ISA ELR ++GE ++ EE I ++F
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 127 TRM 129
+M
Sbjct: 68 VKM 70
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFT 127
D++++ F+ FD D DGK+S EL + S+G+ + E +
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVY 64
Query: 128 RMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFD 187
R AF + E G I L+++L LGD+ + E +++
Sbjct: 65 R--KPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 188 TDGNGVLDYHEFSQMMA 204
G+G ++Y F M+
Sbjct: 123 VSGDGAINYESFVDMLV 139
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + GCI+ K L +++ LG + + +E MI D DG+G +D+ E+ MM
Sbjct: 23 AFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMV 82
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 146 AFEMF-ELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F + + GCI+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 146 AFEMF-ELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F + + GCI+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF++F+ ++ G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF +MM
Sbjct: 9 AFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDF 126
E+ELK+ F+ FD D +G ISA ELR ++GE ++ EE I ++F
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 127 TRM 129
+M
Sbjct: 63 VKM 65
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 146 AFEMF-ELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F + + GCI+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF +F+ ++ G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF ++M
Sbjct: 9 AFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 66
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E+ELK+ FR FD D +G ISA ELR ++GE ++ EE I
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 46
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF F+ + G IT L+R + LG +E AMI+ D D +G ++Y EF++M+A
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFT 127
++L+ FR FD DGDG I+ ELR +G+ + EE A I ++F
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 128 RM 129
RM
Sbjct: 66 RM 67
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AFE+F+ E+ G IT +GLQ +L + G M D GNG + + EF MM
Sbjct: 11 AFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMG 69
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
K+ T ED L+Q FR FD +G G I L+ ++G+ + E
Sbjct: 73 KQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHE 116
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF+MF+ + G I+ K L ++ LG + + E A+I D DG+G +D+ EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMMV 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR +D + DG I EL+ + GE ++
Sbjct: 94 EEELSDLFRMWDKNADGYIDLDELKIMLQATGETIT 129
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETIT 129
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F L + G I+ K L +++ LG + + +E MI D DG+G +D+ EF MM
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETIT 129
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +++ E G I+ ++ +L L ++ S ++ AMI D DG+G +D+ EF +M
Sbjct: 96 AFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 59 CEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
P+++ +E L++ FR +D +G+G IS +R + E +S E+ A I
Sbjct: 84 VNPEQMQQE--LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMI 133
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 148 EMFELEKK---GCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
E F +E K G I+ L+ ++ LG+ + +E MI+ D DG+G ++Y EF QMM
Sbjct: 33 EAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXX 121
K E+E+++ FR D DG+G ISA ELR ++GE ++ EE I
Sbjct: 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 122 XXQDFTRM 129
++F +M
Sbjct: 83 NYEEFVQM 90
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF +++ E G I+ ++ +L L ++ S ++ AMI D DG+G +D+ EF +M
Sbjct: 8 AFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 66
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
EL++ FR +D +G+G IS +R + E +S E+ A I
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMI 45
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF++F+ ++ G I+ K L+R+ LG++ + +E MI D DG+G + EF ++M
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 61 PKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXX 120
+K TKE+ LK F+ FD D GKIS L+ +GE ++ EE + I
Sbjct: 5 SEKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGE 63
Query: 121 XXXQDFTRM 129
Q+F R+
Sbjct: 64 VSEQEFLRI 72
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEA 106
E EL + F+ FD +GDG ISA EL+ SIGE ++ E
Sbjct: 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 122
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEA 106
E EL + F+ FD +GDG ISA EL+ SIGE ++ E
Sbjct: 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 122
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E K+ F FD D G ISA EL S+G S E + +F
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLA 71
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF++F+ G I+ L+ +L +G+ + E M++ +
Sbjct: 72 LMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-S 130
Query: 189 DGNGVLDYHEFSQMMA 204
DG+G ++ +F+ +++
Sbjct: 131 DGSGEINIKQFAALLS 146
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E EL + F+ FD +GDG ISA EL+ SIGE ++
Sbjct: 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 117
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEA 106
E EL + F+ FD +GDG ISA EL+ SIGE ++ E
Sbjct: 82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 121
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF++F+ ++ G I+ K L+R+ LG++ + +E MI D DG+G + EF ++M
Sbjct: 26 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 83
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 61 PKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXX 120
+K TKE+ LK F+ FD D GKIS L+ +GE ++ EE + I
Sbjct: 15 SEKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGE 73
Query: 121 XXXQDFTRM 129
Q+F R+
Sbjct: 74 VSEQEFLRI 82
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 146 AFEMFEL-EKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
AF++F L + GCI+ K L ++ LG + + +E I D DG+G +D+ EF
Sbjct: 23 AFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 146 AFEMFELEKKGCITPKGLQRML---NRLGD--SKSYDECVAMIQVFDTDGNGVLDYHEFS 200
AF +F+++ G IT L +L N+ G+ + ++ MI+ D +G+G +D++EFS
Sbjct: 130 AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFS 189
Query: 201 QMM 203
+MM
Sbjct: 190 EMM 192
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
AF + E KG IT L++ L R G + + + Q+ D+DG+G +DY EF
Sbjct: 60 AFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQI-DSDGSGNIDYTEF 112
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 62 KKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIG 98
K E+E+++ FR FD DG+G ISA ELR ++G
Sbjct: 32 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 178 ECVAMIQVFDTDGNGVLDYHEFSQMMA 204
E MI D DGNG +D+ EF MMA
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMA 28
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 160 PKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
P+ L M ++ D+ S +E +VFD DGNG + E +M
Sbjct: 21 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFG 95
A + K + +D+L+ F+ FD DG+GKIS EL + FG
Sbjct: 133 AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG 170
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 63 KITKEDELKQ---VFRHFDGDGDGKISALELRAYFGSI-GEYMSY-------EEARAAIX 111
K+T ++E K+ +FRH D +GDG++ EL + + GE ++ E A +
Sbjct: 55 KLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILG 114
Query: 112 XXXXXXXXXXXXQDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRM--LNR 169
+F + AF+ F+ + G I+ L + L+
Sbjct: 115 AADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDH 173
Query: 170 LGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
L +SK++ E MI D++ +G +D+ EF +M+
Sbjct: 174 L-ESKTWKE---MISGIDSNNDGDVDFEEFCKMI 203
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 146 AFEMFELEKKGCITPKGLQRML---NRLGD--SKSYDECVAMIQVFDTDGNGVLDYHEFS 200
AF +F+++ G IT L +L N+ G+ + + MI+ D + +G +D+HEFS
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Query: 201 QMM 203
+MM
Sbjct: 187 EMM 189
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
F + + + KG IT + L++ L + G Y+ + + Q+ D+DG+G +DY EF
Sbjct: 57 TFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQI-DSDGSGKIDYTEF 109
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFG 95
A + K + +D+L+ F+ FD DG+GKIS EL + FG
Sbjct: 416 AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG 453
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 63 KITKEDELKQ---VFRHFDGDGDGKISALELRAYFGSI-GEYMSY-------EEARAAIX 111
K+T ++E K+ +FRH D +GDG++ EL + + GE ++ E A +
Sbjct: 338 KLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILG 397
Query: 112 XXXXXXXXXXXXQDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRM--LNR 169
+F + AF+ F+ + G I+ L + L+
Sbjct: 398 AADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDH 456
Query: 170 LGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
L +SK++ E MI D++ +G +D+ EF +M+
Sbjct: 457 L-ESKTWKE---MISGIDSNNDGDVDFEEFCKMI 486
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 36/58 (62%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF+MF+ + G I+ K L ++ ++ S +E ++I+ D + +G +D++EF +M+
Sbjct: 422 AFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ +++ F+ FD DG GKIS EL F + EE + I
Sbjct: 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESII 459
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 147 FEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
F+ F+ G I+ L L LG S S DE M+ DTDG+G +D++EF
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEF 59
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEAR 107
D+++++F+ FD +GDGKIS EL ++G + E R
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQR 41
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 147 FEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
F+ F+ G I+ L L LG S S DE M+ DTDG+G +D++EF
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEF 60
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEAR 107
D+++++F+ FD +GDGKIS EL ++G + E R
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQR 42
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 65 TKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
T ED L+ FR FD +G+GK+ ELR ++GE M+ EE +
Sbjct: 85 TYEDYLEG-FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL 129
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 147 FEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
F + +K G IT + L+ L R+G + E + + Q D D +G +DY EF
Sbjct: 33 FNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEF 85
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 3/130 (2%)
Query: 70 LKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTRM 129
LK+ F D D G+I+ EL+A +G + E ++F
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFI-A 87
Query: 130 XXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTD 189
AF F+ + G ITP LQ+ G E + + D D
Sbjct: 88 ATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIE--ELXRDVDQD 145
Query: 190 GNGVLDYHEF 199
+G +DY+EF
Sbjct: 146 NDGRIDYNEF 155
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 63 KITKEDELKQVFRHFDGDGDGKISALELR 91
KI +ED L F +FD DG G I+ EL+
Sbjct: 94 KIEREDHLFAAFTYFDKDGSGYITPDELQ 122
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
AF++F+ E G ++ L+ ML LG+ + E +++ + D NG +DY +F
Sbjct: 88 AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 141
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF++F+ + G I+ + L + LG + E +IQ D DG+G +D+ EF ++
Sbjct: 41 AFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 65 TKEDELKQV---FRHFDGDGDGKISALELRAYFGSIGEYMSYE 104
EDEL+++ F+ FD DG+G IS EL S+G YM E
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLG-YMPNE 71
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFG 95
A + K + + L++ FR FD D GKIS+ EL FG
Sbjct: 408 AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG 445
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFG 95
A + K + + L++ FR FD D GKIS+ EL FG
Sbjct: 431 AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG 468
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFG 95
A + K + + L++ FR FD D GKIS+ EL FG
Sbjct: 432 AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG 469
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
AF++F+ E G ++ L+ ML LG+ + E +++ + D NG +DY +F
Sbjct: 10 AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 147 FEMFELEKKGCITPKGLQRMLNRLG-DSKSYDECV-AMIQVFDTDGNGVLDYHEFSQMMA 204
F+ F+++ G I+ + L+R+ R ++ D+ + +++Q D +G+G +D+HEF MM+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 74 FRHFDGDGDGKISALELRAYFG 95
F+ FD DG+GKIS EL+ FG
Sbjct: 135 FKFFDIDGNGKISVEELKRIFG 156
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXX 117
+ P++I +EL++ FR FD D DG I+ +L ++G YM E +
Sbjct: 18 SLRPEEI---EELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMN 73
Query: 118 XXXXXX-QDFTRMX----XXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRL-G 171
DF + AF F+ G I+ L+ + +L G
Sbjct: 74 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG 133
Query: 172 DSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
+ + +I+ D +G+G +D+ EF +MM+
Sbjct: 134 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYE-EARAAIXXXXXX 116
+ P++I +EL++ FR FD D DG I+ +L ++G YM E E
Sbjct: 4 SLRPEEI---EELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMN 59
Query: 117 XXXXXXXQDFTRMX----XXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRL-G 171
DF + AF F+ G I+ L+ + +L G
Sbjct: 60 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG 119
Query: 172 DSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
+ + +I+ D +G+G +D+ EF +MM+
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFG 95
A + K + + L++ FR FD D GKIS+ EL FG
Sbjct: 408 AXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFG 445
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEY 100
EL+ F+ D +GDG ++ALEL+ + ++ Y
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAY 39
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 5/135 (3%)
Query: 70 LKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTRM 129
LK++F+ D D G I+ EL+ +G + E + + +F
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFI-A 70
Query: 130 XXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLG-DSKSYDECVAMIQVFDT 188
AF F+ + G IT +Q+ G D D+ MI+ D
Sbjct: 71 ATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD---MIKEIDQ 127
Query: 189 DGNGVLDYHEFSQMM 203
D +G +DY EF+ MM
Sbjct: 128 DNDGQIDYGEFAAMM 142
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 147 FEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFS 200
F+ F+ G I+ L L LG S + DE M+ DTDG+G + + EF+
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFT 67
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYE 104
E +++F+ FD +GDGKISA EL ++G E
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTLGSITPDE 45
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 10/153 (6%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYE-EARAAIXXXXXX 116
+ P++I +EL++ FR FD D DG I+ +L ++G YM E E
Sbjct: 4 SLRPEEI---EELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTEMELIELSQQINMN 59
Query: 117 XXXXXXXQDFTRMX----XXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQR-MLNRLG 171
DF + AF F+ G I+ L+ M LG
Sbjct: 60 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLG 119
Query: 172 DSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
+ + +I+ D +G+G +D+ EF +MM+
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
ELK+ F D D DG I +L+ F S+G +E A + F
Sbjct: 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTA----FLT 72
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDEC 179
+ AF MF+ + +G I L+ +L +GD+ S +E
Sbjct: 73 LFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEI 123
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 147 FEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFS 200
F+ F+ G I+ L L LG S + DE M+ DTDG+G + + EF+
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFT 69
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 71 KQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEAR 107
+++F+ FD +GDGKIS+ EL ++G E R
Sbjct: 14 ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRR 50
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 147 FEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
F+M + + G IT L+ L R+G E ++ D D +G +DY EF
Sbjct: 29 FKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 158 ITPKGLQRMLNRL--------GDSKSYDECVAMIQVFDTDGNGVLDYHEFSQM 202
I+ K LQ +LNR+ + S + C +M+ + D DGNG L EF+ +
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNIL 602
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 163 LQRMLNRLGDSKS----YDECVAMIQVFDTDGNGVLDYHEFSQM 202
L +++ R D K+ D C +M+ V D+D G L + EF +
Sbjct: 756 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 799
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 69 ELKQVFRHFDGDGDGKISALELR-AYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFT 127
EL+ FR FD +GDG+IS ELR A +G + + + I ++F
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
Query: 128 RM 129
RM
Sbjct: 68 RM 69
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRL-GDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMMA 204
AF F+ G I+ L+ + +L G + + +I+ D +G+G +D+ EF +MM+
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 71
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFT 127
+E+ + FR FD D G I+ +LR +GE ++ EE + I +F
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFI 68
Query: 128 RM 129
R+
Sbjct: 69 RI 70
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR +GE +S EE I
Sbjct: 89 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 127
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT--DGNGVLDYHEFSQ 201
AF+ F+ E +G I+ L+ +L+ LG+ S +E +I + D D G + Y EF +
Sbjct: 90 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVK 147
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR +GE +S EE I
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT--DGNGVLDYHEFSQ 201
AF+ F+ E +G I+ L+ +L+ LG+ S +E +I + D D G + Y EF +
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVK 146
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR +GE +S EE I
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT--DGNGVLDYHEFSQ 201
AF+ F+ E +G I+ L+ +L+ LG+ S +E +I + D D G + Y EF +
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVK 146
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 150 FELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
F+L G I L+RML +LG K++ E +I+ + Y +F +MM
Sbjct: 57 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMM 110
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 65 TKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
T DE + F+ FD +G G IS+ E+R +GE ++ ++
Sbjct: 82 TAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQ 122
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Query: 65 TKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEY-MSYEEARAAIXXXXXXXXXXXXX 123
T+ ++ K+ F D + DG I +LR F ++G + EE A I
Sbjct: 22 TEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTV-- 79
Query: 124 QDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMI 183
F M AF++ + + KG I L+ +L G + +E M
Sbjct: 80 --FLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMW 137
Query: 184 QVFDTDGNGVLDY 196
F D G +DY
Sbjct: 138 AAFPPDVAGNVDY 150
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 150 FELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
F+L +G I L+RM+ +LG K++ E MI + + Y +F MM
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 150 FELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
F+L +G I L+RM+ +LG K++ E MI + + Y +F MM
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSI 97
+ + I E L+ +F+ D DG+G+I E ++GSI
Sbjct: 26 VSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 5/141 (3%)
Query: 65 TKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEY-MSYEEARAAIXXXXXXXXXXXXX 123
T+ ++ K+ F D + DG I +LR F ++G + EE A I
Sbjct: 4 TEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTV-- 61
Query: 124 QDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMI 183
F M AF++ + + KG I L+ +L G + +E M
Sbjct: 62 --FLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMW 119
Query: 184 QVFDTDGNGVLDYHEFSQMMA 204
F D G +DY ++
Sbjct: 120 AAFPPDVAGNVDYKNICYVIT 140
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYD-ECVAMIQVFDTDGNGVLDYHEFSQMM 203
AF++F+ G I + ++ ++G+ D E ++ D DGNGV+D EF ++
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 177 DECVAMIQVFDTDGNGVLDYHEFSQMM 203
+E + +VFD +G+GV+D+ EF +M
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIM 34
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSI 97
+ + I E L+ +F+ D DG+G+I E ++GSI
Sbjct: 26 VSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 14/146 (9%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
EL Q+FR D +GDG++ EL + + ++ + DF R
Sbjct: 41 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 100
Query: 129 ----------MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDE 178
AF+ F+ + G IT + L R+ G ++ DE
Sbjct: 101 NGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF---GVTEVDDE 157
Query: 179 CV-AMIQVFDTDGNGVLDYHEFSQMM 203
++Q D + +G +D+ EF +MM
Sbjct: 158 TWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 58 ACEPKKITKEDE-LKQVFRHFDGDGDGKISALELRAYFG 95
C K++ E L F+ FD DG GKI+ EL FG
Sbjct: 112 VCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium
Bound Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 30.0 bits (66), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 58 ACEPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSI 97
+ + I E L+ +F+ D DG+G+I E ++GSI
Sbjct: 26 VSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR ++GE +S E+ I
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 49
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR ++GE +S E+ I
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR ++GE +S E+ I
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 14/146 (9%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
EL Q+FR D +GDG++ EL + + ++ + DF R
Sbjct: 315 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 374
Query: 129 ----------MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDE 178
AF+ F+ + G IT + L R+ G ++ DE
Sbjct: 375 NGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF---GVTEVDDE 431
Query: 179 CV-AMIQVFDTDGNGVLDYHEFSQMM 203
++Q D + +G +D+ EF +MM
Sbjct: 432 TWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFG 95
+ L F+ FD DG GKI+ EL FG
Sbjct: 397 ERLLAAFQQFDSDGSGKITNEELGRLFG 424
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 74 FRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
R FD +G+G + E+R ++GE M+ EE +
Sbjct: 92 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV 128
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 68 DELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
+E + F+ FD D G I ELR S+GE +S EE
Sbjct: 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE 113
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKS---YDECVAMIQVFDTDGNGVLDYHEFSQM 202
F++F+ + G I L+ +L LG+ S DE + + V D G+++YH+F QM
Sbjct: 81 GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKD----GMVNYHDFVQM 136
Query: 203 M 203
+
Sbjct: 137 I 137
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 74 FRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
R FD +G+G + E+R ++GE M+ EE +
Sbjct: 90 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV 126
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR ++GE +S E+ I
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR ++GE +S E+ I
Sbjct: 86 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 124
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 72 QVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
+ F+ FD +G G IS ELR ++GE +S E+ I
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 182 MIQVFDTDGNGVLDYHEF 199
+I +FDTDGNG +D+ EF
Sbjct: 43 VIDIFDTDGNGEVDFKEF 60
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 182 MIQVFDTDGNGVLDYHEF 199
+I +FDTDGNG +D+ EF
Sbjct: 44 VIDIFDTDGNGEVDFKEF 61
>pdb|2I7A|A Chain A, Domain Iv Of Human Calpain 13
Length = 174
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 158 ITPKG-------LQRMLNR------LGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQM 202
+ P+G LQ +LN+ GD S DEC +++ + + NG LD EF+++
Sbjct: 14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARL 71
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 182 MIQVFDTDGNGVLDYHEF 199
+I +FDTDGNG +D+ EF
Sbjct: 57 VIDIFDTDGNGEVDFKEF 74
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 39
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 182 MIQVFDTDGNGVLDYHEF 199
+I +FDTDGNG +D+ EF
Sbjct: 58 VIDIFDTDGNGEVDFKEF 75
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 41
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 51/142 (35%), Gaps = 18/142 (12%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIG-----EYMS--YEEARAAIXXXXXXXXXXX 121
E K+ F D + DG I +L S+G EY+ EA I
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTM------- 60
Query: 122 XXQDFTRMXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVA 181
F M AF F+ E G I L+ +L +GD + +E
Sbjct: 61 ----FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDE 116
Query: 182 MIQVFDTDGNGVLDYHEFSQMM 203
M + D G +Y EF++++
Sbjct: 117 MYREAPIDKKGNFNYVEFTRIL 138
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 44
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 150 FELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
F+L G I L+RML +LG K++ E +I + Y +F +MM
Sbjct: 60 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 113
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 67 EDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMS 102
E+EL +FR FD + DG I EL+ + GE ++
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETIT 40
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 146 AFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
F +F+ +K G I K L+ + D+ + Q++D D NG++ Y E +++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 170 LGDSKSYDECVAMIQVFDTDGNGVLDYHEF 199
GD ++ E V VFD D NG +D+ EF
Sbjct: 58 FGDPSAFAEYV--FNVFDADKNGYIDFKEF 85
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 150 FELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDTDGNGVLDYHEFSQMM 203
F+L G I L+RML +LG K++ E +I + Y +F +MM
Sbjct: 41 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 94
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAI 110
E+++ F FD DG G I EL+ ++G EE + I
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMI 73
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 58 ACEPKKIT-KEDELKQVFRHFDGDGDGKISALELRAYFG--SIGE 99
C K+I E+ L++ F FD D GKI+ EL FG SI E
Sbjct: 424 VCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISE 468
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 171 GDSKSYDECVAMIQVFDTDGNGVLDYHEFSQM 202
G S + M+++FDTD NG + ++EF M
Sbjct: 81 GIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 74 FRHFDGDGDGKISALELRAYFGSIGEYMS 102
R FD +G+G + ELR ++GE M+
Sbjct: 87 LRVFDKEGNGTVMGAELRHVLATLGEKMT 115
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 171 GDSKSYDECVAMIQVFDTDGNGVLDYHEFSQM 202
G S + M+++FDTD NG + ++EF M
Sbjct: 81 GIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 61 PKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYE 104
P++I +EL++ FR FD D DG I+ +L ++G YM E
Sbjct: 6 PEEI---EELREAFREFDKDKDGYINCRDLGNCMRTMG-YMPTE 45
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 74 FRHFDGDGDGKISALELRAYFGSIGEYMS 102
R FD +G+G + ELR ++GE M+
Sbjct: 89 LRVFDKEGNGTVMGAELRHVLATLGEKMT 117
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 154 KKGCITPKGLQRMLNRLGDSKSY-----DECVAMIQVFDTDGNGVLDYHEFSQMMA 204
+ G I LQR L + G + Y + C M+ + D D +G + ++EF ++ A
Sbjct: 14 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA 69
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 74 FRHFDGDGDGKISALELRAYFGSIGEYMS 102
R FD +G+G + ELR ++GE M+
Sbjct: 91 LRVFDKEGNGTVMGAELRHVLATLGEKMT 119
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 154 KKGCITPKGLQRMLNRLGDSKSY-----DECVAMIQVFDTDGNGVLDYHEFSQMMA 204
+ G I LQR L + G + Y + C M+ + D D +G + ++EF ++ A
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA 100
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 154 KKGCITPKGLQRMLNRLGDSKSY-----DECVAMIQVFDTDGNGVLDYHEFSQMMA 204
+ G I LQR L + G + Y + C M+ + D D +G + ++EF ++ A
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWA 100
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 70 LKQVFRHFDGDGDGKISALELRAYFGSIG 98
LK +++ D DGDGK++ E+ +F G
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFG 105
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 60 EPKKITKEDELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEE 105
E K E+EL FR FD + DG I EL + GE++ E+
Sbjct: 2 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 47
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 163 LQRMLNRLGDSKS----YDECVAMIQVFDTDGNGVLDYHEF 199
L+R+L + D KS + C M+ + D+DG+G L EF
Sbjct: 556 LRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEF 596
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 163 LQRMLNRLGDSKS----YDECVAMIQVFDTDGNGVLDYHEFSQM 202
L +++ R D K+ D C +M+ V D+D G L + EF +
Sbjct: 36 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 79
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 163 LQRMLNRLGDSKS----YDECVAMIQVFDTDGNGVLDYHEF 199
L +++ R D K+ D C +M+ V D+D G L + EF
Sbjct: 40 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEF 80
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+K+ F D D DG +S +++A +G +E A + F
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM----FLS 62
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF MF+ ++ + + ++ +L +GD+ + DE +
Sbjct: 63 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 122
Query: 189 DGNGVLDYHEFSQMM 203
+G G DY +F+ M+
Sbjct: 123 EG-GKFDYVKFTAMI 136
>pdb|4AIQ|A Chain A, The Frpb Iron Transporter From Neisseria Meningitidis
(f5-1 Variant)
pdb|4B7O|A Chain A, The Frpb Iron Transporter From Neisseria Meningitidis
(f5-1 Variant) Apoprotein Form
Length = 745
Score = 26.9 bits (58), Expect = 7.8, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 66 KEDELKQVFRHFDGDGDGKISALELRAYFGSIG 98
KE E + FR+F+G SAL+ R+Y IG
Sbjct: 224 KEYEAGKGFRNFNGGKTVPYSALDKRSYLAKIG 256
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 163 LQRMLNRLGDSKS----YDECVAMIQVFDTDGNGVLDYHEFSQM 202
L +++ R D K+ D C +M+ V D+D G L + EF +
Sbjct: 29 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 72
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 163 LQRMLNRLGDSKS----YDECVAMIQVFDTDGNGVLDYHEF 199
L +++ R D K+ D C +M+ V D+D G L + EF
Sbjct: 40 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEF 80
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+K+ F D D DG +S +++A +G +E A + F
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM----FLS 63
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF MF+ ++ + + ++ +L +GD+ + DE +
Sbjct: 64 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 123
Query: 189 DGNGVLDYHEFSQMM 203
+G G DY +F+ M+
Sbjct: 124 EG-GKFDYVKFTAMI 137
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 163 LQRMLNRLGDSKS----YDECVAMIQVFDTDGNGVLDYHEFSQM 202
L +++ R D K+ D C +M+ V D+D G L + EF +
Sbjct: 29 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYL 72
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+K+ F D D DG +S +++A +G +E A + F
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM----FLS 63
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF MF+ ++ + + ++ +L +GD+ + DE +
Sbjct: 64 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 123
Query: 189 DGNGVLDYHEFSQMM 203
+G G DY +F+ M+
Sbjct: 124 EG-GKFDYVKFTAMI 137
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+K+ F D D DG +S +++A +G +E A + F
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM----FLS 74
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF MF+ ++ + + ++ +L +GD+ + DE +
Sbjct: 75 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 134
Query: 189 DGNGVLDYHEFSQMM 203
+G G DY +F+ M+
Sbjct: 135 EG-GKFDYVKFTAMI 148
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 69 ELKQVFRHFDGDGDGKISALELRAYFGSIGEYMSYEEARAAIXXXXXXXXXXXXXQDFTR 128
E+K+ F D D DG +S +++A +G +E A + F
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTM----FLS 60
Query: 129 MXXXXXXXXXXXXXXXXAFEMFELEKKGCITPKGLQRMLNRLGDSKSYDECVAMIQVFDT 188
+ AF MF+ ++ + + ++ +L +GD+ + DE +
Sbjct: 61 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 120
Query: 189 DGNGVLDYHEFSQMM 203
+G G DY +F+ M+
Sbjct: 121 EG-GKFDYVKFTAMI 134
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,678,284
Number of Sequences: 62578
Number of extensions: 133644
Number of successful extensions: 1293
Number of sequences better than 100.0: 241
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 538
Number of HSP's gapped (non-prelim): 597
length of query: 204
length of database: 14,973,337
effective HSP length: 94
effective length of query: 110
effective length of database: 9,091,005
effective search space: 1000010550
effective search space used: 1000010550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)