BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028785
MAARGLLLASIYLSLLVHECYGVTLFSSLQKTLQVTTTTKRGQVLKAGEDKVTITWGLNQ
SLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPYNKSLQTLDW
IIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFDIQAITGRHASLDIASVCFS
VFSIVALFGFFFHEKRKARMSQQK

High Scoring Gene Products

Symbol, full name Information P value
WR3
WOUND-RESPONSIVE 3
protein from Arabidopsis thaliana 3.1e-51
AT4G24730 protein from Arabidopsis thaliana 7.7e-48

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028785
        (204 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2157737 - symbol:WR3 "WOUND-RESPONSIVE 3" spec...   532  3.1e-51   1
TAIR|locus:2121969 - symbol:AT4G24730 "AT4G24730" species...   500  7.7e-48   1


>TAIR|locus:2157737 [details] [associations]
            symbol:WR3 "WOUND-RESPONSIVE 3" species:3702 "Arabidopsis
            thaliana" [GO:0005886 "plasma membrane" evidence=ISM;IDA]
            [GO:0010167 "response to nitrate" evidence=IEP;RCA] [GO:0015112
            "nitrate transmembrane transporter activity" evidence=IMP]
            [GO:0015706 "nitrate transport" evidence=RCA;IMP] [GO:0006612
            "protein targeting to membrane" evidence=RCA] [GO:0006820 "anion
            transport" evidence=RCA] [GO:0006862 "nucleotide transport"
            evidence=RCA] [GO:0006865 "amino acid transport" evidence=RCA]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
            [GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009627
            "systemic acquired resistance" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            [GO:0015696 "ammonium transport" evidence=RCA] [GO:0015802 "basic
            amino acid transport" evidence=RCA] [GO:0034976 "response to
            endoplasmic reticulum stress" evidence=RCA] [GO:0043069 "negative
            regulation of programmed cell death" evidence=RCA] [GO:0043090
            "amino acid import" evidence=RCA] [GO:0043269 "regulation of ion
            transport" evidence=RCA] [GO:0009611 "response to wounding"
            evidence=IEP] GO:GO:0016021 GO:GO:0005886 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009611 GO:GO:0015112 GO:GO:0042128
            EMBL:AB024031 GO:GO:0010167 EMBL:AJ310933 EMBL:AJ311926
            EMBL:AY085586 IPI:IPI00528407 RefSeq:NP_199831.1 RefSeq:NP_851159.1
            RefSeq:NP_851160.1 UniGene:At.21028 IntAct:Q9FGS5 STRING:Q9FGS5
            TCDB:8.A.20.1.1 PaxDb:Q9FGS5 PRIDE:Q9FGS5 EnsemblPlants:AT5G50200.1
            EnsemblPlants:AT5G50200.2 EnsemblPlants:AT5G50200.3 GeneID:835085
            KEGG:ath:AT5G50200 TAIR:At5g50200 eggNOG:NOG312409
            HOGENOM:HOG000239218 InParanoid:Q9FGS5 OMA:VKVKLCY PhylomeDB:Q9FGS5
            ProtClustDB:CLSN2687019 Genevestigator:Q9FGS5 InterPro:IPR016605
            PIRSF:PIRSF012939 Uniprot:Q9FGS5
        Length = 210

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 100/163 (61%), Positives = 128/163 (78%)

Query:    42 GQVLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKT 101
             G VL AG+D + ITW L+ S+ +  ++ +K +K++LC+AP SQ DR WRKT D L KDKT
Sbjct:    49 GVVLDAGKDTLNITWTLS-SIGSKREAEFKIIKVKLCYAPPSQVDRPWRKTHDELFKDKT 107

Query:   102 CSFKIVEKPYNKSLQTLDWIIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFD 161
             C  KI+ KPY+K+LQ+  W +E D+PT TYFVRAYA++A  HEVAYGQST+D K TNLF 
Sbjct:   108 CPHKIIAKPYDKTLQSTTWTLERDIPTGTYFVRAYAVDAIGHEVAYGQSTDDAKKTNLFS 167

Query:   162 IQAITGRHASLDIASVCFSVFSIVALFGFFFHEKRKARMSQQK 204
             +QAI+GRHASLDIAS+CFSVFS+VAL  FF +EKRKA++ Q K
Sbjct:   168 VQAISGRHASLDIASICFSVFSVVALVVFFVNEKRKAKIEQSK 210


>TAIR|locus:2121969 [details] [associations]
            symbol:AT4G24730 "AT4G24730" species:3702 "Arabidopsis
            thaliana" [GO:0004722 "protein serine/threonine phosphatase
            activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
            [GO:0016787 "hydrolase activity" evidence=IEA] GO:GO:0016021
            GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR
            eggNOG:COG1409 EMBL:AL035356 EMBL:AL161562 GO:GO:0042128
            HOGENOM:HOG000239218 InterPro:IPR016605 PIRSF:PIRSF012939
            EMBL:DQ492237 IPI:IPI00526486 IPI:IPI00541727 PIR:T05562
            RefSeq:NP_194204.2 UniGene:At.43613 PaxDb:Q9SB67 GeneID:828575
            KEGG:ath:AT4G24730 TAIR:At4g24720 ProtClustDB:CLSN2681328
            Genevestigator:Q1G2Z1 Uniprot:Q9SB67
        Length = 209

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 93/162 (57%), Positives = 126/162 (77%)

Query:    44 VLKAGEDKVTITWGLNQSLA-AGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTC 102
             VL+AG+D VTITW L  S A   TD+A+KT++++LC+AP+SQ DR WRKT++ L KD++C
Sbjct:    48 VLEAGKDMVTITWKLKSSSAKVDTDTAFKTIQVKLCYAPISQVDRPWRKTDNKLFKDRSC 107

Query:   103 SFKIVEKPYNKSLQTLDWIIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFDI 162
               +IV K Y+K+ Q+LDW I  D+PT TYFVRAY ++ + HEVAYGQST++ +TTNLF +
Sbjct:   108 PHEIVSKAYDKTPQSLDWTIGLDIPTGTYFVRAYGIDGDGHEVAYGQSTDEGRTTNLFSV 167

Query:   163 QAITGRHASLDIASVCFSVFSIVALFGFFFHEKRKARMSQQK 204
              AI+G H  LDIAS  FSVFS+V+LF FF  EKRKA++ Q++
Sbjct:   168 HAISGHHVGLDIASTFFSVFSVVSLFVFFVMEKRKAKLEQRE 209


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      204       179   0.00089  109 3  11 22  0.38    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  162 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.20u 0.12s 15.32t   Elapsed:  00:00:01
  Total cpu time:  15.20u 0.12s 15.32t   Elapsed:  00:00:01
  Start:  Mon May 20 18:37:58 2013   End:  Mon May 20 18:37:59 2013

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