Query 028785
Match_columns 204
No_of_seqs 38 out of 40
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 03:17:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028785.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028785hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eja_A Protein GH61E; beta san 93.9 0.36 1.2E-05 40.8 9.6 80 44-138 51-139 (208)
2 2c9r_A COPC, copper resistance 93.7 0.46 1.6E-05 35.4 8.7 89 34-146 4-94 (102)
3 1lyq_A PCOC copper resistance 93.6 0.43 1.5E-05 35.8 8.4 90 34-146 5-96 (104)
4 2vtc_A CEL61B, cellulase; hydr 90.9 1.1 3.7E-05 38.5 8.8 85 44-138 90-181 (249)
5 3pe9_A Fibronectin(III)-like m 87.8 2.2 7.5E-05 31.7 7.3 71 37-143 5-75 (98)
6 2zws_A Neutral ceramidase; pri 87.5 4.5 0.00015 38.9 11.1 105 46-166 535-645 (646)
7 4eis_A Polysaccharide monooxyg 86.2 4.1 0.00014 34.8 9.1 85 44-138 64-157 (225)
8 3c12_A FLGD, flagellar protein 80.9 1.9 6.5E-05 33.1 4.4 33 113-145 63-99 (138)
9 4eir_A Polysaccharide monooxyg 76.8 2.3 8E-05 36.2 4.2 24 115-138 131-154 (223)
10 3k6d_A T-cadherin; cell adhesi 75.8 1.4 4.8E-05 31.7 2.2 48 120-168 7-58 (99)
11 3k6i_A T-cadherin; cell adhesi 75.3 2.4 8.3E-05 30.4 3.3 48 120-168 7-58 (99)
12 1bpv_A Titin, A71, connectin; 75.1 20 0.00068 25.6 8.7 27 117-143 67-93 (112)
13 3zud_A GH61 isozyme A; hydrola 74.0 2.7 9.2E-05 36.0 3.8 24 115-138 138-161 (228)
14 3mvs_A Cadherin-23, otocadheri 72.3 1.3 4.4E-05 35.5 1.4 47 120-168 17-63 (210)
15 2yst_A Protocadherin-7; BH-PCD 71.8 1.7 6E-05 31.7 1.9 52 117-168 18-72 (119)
16 3k6f_A T-cadherin; cell adhesi 67.3 3.4 0.00012 29.7 2.6 47 120-167 8-58 (100)
17 1x4z_A Biregional cell adhesio 64.4 32 0.0011 23.8 8.0 26 117-142 75-100 (121)
18 2ks1_B Epidermal growth factor 62.8 0.6 2E-05 31.0 -2.0 19 182-200 24-42 (44)
19 1wf5_A Sidekick 2 protein; FNI 62.5 34 0.0012 23.3 8.9 27 117-143 75-101 (121)
20 2ag4_A GM2-AP, ganglioside GM2 61.0 41 0.0014 26.6 8.0 25 121-146 129-153 (164)
21 2jwa_A Receptor tyrosine-prote 58.9 0.64 2.2E-05 31.0 -2.4 21 181-201 23-43 (44)
22 2l2t_A Receptor tyrosine-prote 58.8 1.7 6E-05 28.8 -0.3 28 174-201 12-42 (44)
23 3osv_A Flagellar basal-BODY RO 58.6 9.7 0.00033 29.1 3.9 31 115-146 63-97 (138)
24 2vkw_A Neural cell adhesion mo 57.4 50 0.0017 24.5 7.7 26 117-142 164-189 (209)
25 1wis_A KIAA1514 protein; FNIII 56.3 30 0.001 24.3 5.9 28 116-143 77-104 (124)
26 2dju_A Receptor-type tyrosine- 55.6 41 0.0014 22.1 8.2 26 118-143 61-86 (106)
27 1nqj_A Class 1 collagenase; be 55.3 5.1 0.00018 30.9 1.8 18 126-143 95-112 (119)
28 1x5l_A Ephrin type-A receptor 54.3 37 0.0013 22.7 6.0 26 117-142 65-90 (111)
29 1uey_A KIAA0343 protein; immun 53.9 36 0.0012 23.6 6.0 18 126-143 82-99 (127)
30 3lpw_A A77-A78 domain from tit 53.2 60 0.002 23.2 7.5 25 118-142 158-182 (197)
31 2ee0_A Protocadherin-9; Ca dom 53.1 5.3 0.00018 29.1 1.5 53 116-168 17-73 (114)
32 2p9r_A Alpha-2-M, alpha-2-macr 50.3 14 0.0005 26.0 3.4 22 116-137 63-84 (102)
33 2dm4_A Sortilin-related recept 49.8 56 0.0019 21.9 8.3 24 119-142 64-87 (108)
34 2dlh_A Receptor-type tyrosine- 49.5 57 0.002 22.0 7.5 26 118-143 76-101 (121)
35 2ee2_A Contactin-1; neural cel 47.8 64 0.0022 22.0 7.4 26 117-142 73-98 (119)
36 3mvs_A Cadherin-23, otocadheri 47.7 17 0.00057 28.9 3.8 48 116-167 112-162 (210)
37 3ubf_A Neural-cadherin; cell a 46.7 14 0.00047 31.2 3.3 52 116-168 217-268 (316)
38 2yuw_A Myosin binding protein 45.6 67 0.0023 21.6 9.0 27 117-143 64-90 (110)
39 1x3d_A Fibronectin type-III do 43.6 74 0.0025 21.6 6.8 72 44-142 26-97 (118)
40 1k85_A Chitinase A1; fibronect 43.2 36 0.0012 22.4 4.3 26 119-144 52-77 (88)
41 1bqu_A Protein (GP130); cytoki 42.4 1E+02 0.0035 22.8 9.4 26 117-142 163-188 (215)
42 2dn7_A Receptor-type tyrosine- 38.6 84 0.0029 20.8 7.5 26 117-142 61-86 (107)
43 3k5r_A Cadherin 13; mouse, str 38.2 15 0.00051 29.3 2.1 53 116-168 111-170 (218)
44 3qrb_A Cadherin-1; cell adhesi 38.1 21 0.00072 28.3 2.9 53 116-168 111-171 (213)
45 2ede_A Netrin receptor DCC; tu 37.8 89 0.0031 20.9 9.0 27 117-143 68-94 (114)
46 2a4e_A Cadherin-11; dimer, cal 37.7 24 0.00082 28.4 3.2 48 117-168 111-164 (215)
47 3isy_A Bsupi, intracellular pr 37.5 1.4E+02 0.0047 22.9 9.2 47 86-138 54-102 (120)
48 1j8k_A Fibronectin; EDA, TYPEI 37.0 87 0.003 20.5 7.6 26 117-142 54-79 (94)
49 3lnd_A CDH6 protein, cadherin 35.6 27 0.00094 27.6 3.2 49 116-168 109-163 (207)
50 3ubf_A Neural-cadherin; cell a 35.3 26 0.00089 29.5 3.2 49 118-168 113-162 (316)
51 1wuz_A Pcdha4 protein, CNR-EC1 34.7 6.7 0.00023 28.3 -0.5 50 116-168 3-57 (103)
52 1wfo_A Sidekick 2; FN3, cell a 34.5 1.1E+02 0.0038 21.0 8.9 74 44-142 36-109 (130)
53 2ic2_A CG9211-PA, GH03927P; IH 34.2 1.1E+02 0.0039 21.5 6.2 41 117-164 70-110 (115)
54 2ibg_A CG9211-PA, GH03927P; IH 33.7 1.4E+02 0.0048 21.9 7.6 26 117-142 173-198 (214)
55 1uem_A KIAA1568 protein; immun 33.3 1.1E+02 0.0037 20.5 7.7 26 118-143 72-97 (117)
56 1zxk_A Cadherin-8; strand dime 32.7 24 0.00084 25.2 2.3 44 121-167 8-55 (98)
57 1wyj_A Protocadherin beta 14; 32.3 12 0.00043 27.9 0.7 51 115-168 10-65 (125)
58 1zvn_A Mn-cadherin; strand dim 31.8 23 0.00078 25.4 2.0 9 115-123 33-41 (99)
59 1x5y_A Myosin binding protein 31.7 1.2E+02 0.0041 20.4 8.9 26 118-143 66-91 (111)
60 3teu_A Fibcon; FN3 domain, fib 31.5 1.1E+02 0.0038 20.1 7.6 27 116-142 53-79 (98)
61 3m7o_A Lymphocyte antigen 86; 31.0 2.2E+02 0.0074 23.2 8.8 98 35-145 51-152 (162)
62 2edx_A Protein tyrosine phosph 30.5 1.3E+02 0.0044 20.5 8.9 26 117-142 78-103 (134)
63 2qvi_A Cadherin-2; beta barrel 30.0 28 0.00096 27.9 2.4 53 116-168 111-170 (215)
64 3p4l_A Neogenin; iron homeosta 29.9 1.7E+02 0.0057 21.6 7.7 13 47-59 16-28 (211)
65 1lv4_A Catestatin, chromograni 29.6 15 0.0005 22.1 0.5 11 80-90 16-26 (26)
66 2ibg_A CG9211-PA, GH03927P; IH 29.6 1.7E+02 0.0057 21.5 10.0 85 44-143 10-95 (214)
67 3ppe_A Vascular endothelial ca 29.3 55 0.0019 25.8 4.0 48 116-168 107-160 (203)
68 2cui_A Tenascin-X; fibronectin 28.8 1.6E+02 0.0055 21.0 7.2 24 118-141 70-93 (112)
69 3ubh_A Neural-cadherin; cell a 28.4 41 0.0014 29.5 3.4 51 116-167 222-272 (419)
70 2x2u_A Proto-oncogene tyrosine 28.0 36 0.0012 27.8 2.8 52 116-167 6-65 (246)
71 2l3b_A Conserved protein found 27.8 95 0.0033 24.8 5.1 58 93-151 2-66 (130)
72 1wfu_A Unnamed protein product 27.7 67 0.0023 23.5 4.0 26 118-143 75-100 (120)
73 1va9_A DOWN syndrome cell adhe 27.7 1.4E+02 0.0048 20.0 9.1 27 116-142 76-102 (122)
74 1x5x_A Fibronectin type-III do 27.6 74 0.0025 21.3 4.0 27 117-143 63-89 (109)
75 3pdd_A Glycoside hydrolase, fa 26.2 64 0.0022 25.6 3.9 23 117-143 145-167 (190)
76 2crm_A Fibronectin type-III do 25.3 70 0.0024 21.9 3.6 26 117-142 74-99 (120)
77 3q2w_A Cadherin-2; cell adhesi 25.0 51 0.0017 30.1 3.5 52 116-167 111-169 (559)
78 2jll_A NCAM2, neural cell adhe 23.5 2.8E+02 0.0096 22.1 8.8 27 117-143 348-374 (389)
79 1l3w_A EP-cadherin, C-cadherin 23.3 55 0.0019 29.9 3.3 53 116-168 117-177 (546)
80 2e7h_A Ephrin type-B receptor 23.1 1.7E+02 0.006 19.5 6.9 24 119-142 65-88 (109)
81 2ed7_A Netrin receptor DCC; tu 23.1 1.7E+02 0.0059 19.5 8.4 26 117-142 73-98 (119)
82 2r5o_A Putative ATP binding co 22.4 82 0.0028 24.7 3.8 25 117-141 125-149 (188)
83 2a9d_A Sulfite oxidase; molybd 21.7 4E+02 0.014 23.7 8.6 76 37-143 258-343 (372)
84 3jqw_A COLH protein, collagena 21.6 1.2E+02 0.0039 23.1 4.4 43 116-162 49-91 (121)
85 3k2m_C Monobody HA4; engineere 21.4 1.6E+02 0.0054 19.9 4.7 27 117-143 59-85 (101)
86 1q55_A EP-cadherin, C-cadherin 21.2 62 0.0021 31.7 3.5 53 116-168 266-326 (880)
87 2crz_A Fibronectin type-III do 20.6 1.4E+02 0.0048 20.0 4.3 26 117-142 64-89 (110)
No 1
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=93.94 E-value=0.36 Score=40.78 Aligned_cols=80 Identities=18% Similarity=0.208 Sum_probs=45.6
Q ss_pred eeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeecccccc---------C
Q 028785 44 VLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPYNK---------S 114 (204)
Q Consensus 44 vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y~~---------~ 114 (204)
.+.|| |+|++.|....+-+ | -|.+=|=-.|..+--..|.++.+. =|||.+..+.. .
T Consensus 51 ~V~AG-~~v~~~~~~~~~H~-G------Pv~~Ylak~~~~~~~~~~dgsg~~-------WFKI~e~g~~~~~~~~W~~~~ 115 (208)
T 3eja_A 51 NTTAG-STVTYWANPDVYHP-G------PVQFYMARVPDGEDINSWNGDGAV-------WFKVYEDHPTFGAQLTWPSTG 115 (208)
T ss_dssp EEETT-CEEEEEEESCCCSS-S------CEEEEEEECCTTSCTTTCCCCSSC-------BEEEEECCCBCSSSCBCTTTT
T ss_pred EECCC-CEEEEEEecCCCCC-C------ceEEEEeeCCCCccccccCCCCCc-------EEEEeeeccCCCCcceeeccC
Confidence 35566 88999997542222 2 455555444442222222222221 14444433321 1
Q ss_pred CCeEEEEecCCCCCceeEEEEEEE
Q 028785 115 LQTLDWIIESDVPTATYFVRAYAL 138 (204)
Q Consensus 115 ~gs~~~tl~~dvp~atYfvraya~ 138 (204)
.++++++||.++|++.|.+|.=.+
T Consensus 116 ~~~~~~~iP~~l~~G~YllR~E~i 139 (208)
T 3eja_A 116 KSSFAVPIPPCIKSGYYLLRAEQI 139 (208)
T ss_dssp CCEEEEECCSSBCSEEEEEEEEEE
T ss_pred CCceEEeccCCCCCcceEEEeeee
Confidence 378999999999999999997544
No 2
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=93.65 E-value=0.46 Score=35.42 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=54.9
Q ss_pred EEEEecCCCceeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeecccc-c
Q 028785 34 QVTTTTKRGQVLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPY-N 112 (204)
Q Consensus 34 ~Vtas~~~g~vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y-~ 112 (204)
.+..+|.+|++| +..+.|+++++-. .+..|..|+|. .+. .+.|..-. . ++..++- +
T Consensus 4 L~~s~Pa~ga~v-~aP~~v~L~Fse~------v~~~~s~v~v~---~~~---g~~v~~~~---------~-~~~~~~~~~ 60 (102)
T 2c9r_A 4 LVSSTPAEGSEG-AAPAKIELHFSEN------LVTQFSGAKLV---MTA---MPGMEHSP---------M-AVKAAVSGG 60 (102)
T ss_dssp EEEEESCTTCEE-SCCSCEEEEESSC------CCGGGCEEEEE---EEE---CC-----C---------E-EECEEEEEC
T ss_pred ccccCCCCcCEE-CCCCEEEEEeCCC------CccCccEEEEE---CCC---CCeeeecc---------c-cccccceec
Confidence 467889999999 9999999996543 34455677773 221 23332210 0 1112222 2
Q ss_pred cC-CCeEEEEecCCCCCceeEEEEEEEeCCCceEe
Q 028785 113 KS-LQTLDWIIESDVPTATYFVRAYALNAERHEVA 146 (204)
Q Consensus 113 ~~-~gs~~~tl~~dvp~atYfvraya~da~g~~va 146 (204)
.. ...+...++ ..|+|+|.|+=-++.+|||.+.
T Consensus 61 ~~~~~~~~~~l~-~L~~G~YtV~WrvvS~DGH~~~ 94 (102)
T 2c9r_A 61 GDPKTMVITPAS-PLTAGTYKVDWRAVSSDTFPIT 94 (102)
T ss_dssp SSTTEEEEEESS-CCCSEEEEEEEEECCTTCCCEE
T ss_pred CCCCcEEEEECC-CCCCceEEEEEEEEecCCCccC
Confidence 12 234566664 8999999999999999999653
No 3
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=93.56 E-value=0.43 Score=35.79 Aligned_cols=90 Identities=16% Similarity=0.203 Sum_probs=54.8
Q ss_pred EEEEecCCCceeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeecccc-c
Q 028785 34 QVTTTTKRGQVLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPY-N 112 (204)
Q Consensus 34 ~Vtas~~~g~vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y-~ 112 (204)
.+..+|.+|++| +..+.|+++++-. .+..+.+|+|. .+. .+.|.. ++.. ++..++- +
T Consensus 5 L~~s~Pa~ga~v-~aP~~V~L~Fse~------v~~~~s~v~v~---~~~---g~~v~~---~~~~------~~~~~~~~~ 62 (104)
T 1lyq_A 5 LKSSVPQADSAV-AAPEKIQLNFSEN------LTVKFSGAKLT---MTG---MKGMSS---HSPM------PVAAKVAPG 62 (104)
T ss_dssp EEEEESCTTCEE-SCCCCEEEEESSC------CCGGGCEEEEE---EEE---EC---C---CCCE------ECCEEEEEC
T ss_pred ccccCCCCcCEE-CCCCEEEEEeCCC------CcccccEEEEE---CCC---CCeeee---cccc------ccccceeec
Confidence 467889999999 9999999996433 34445677773 221 222321 0000 0001221 1
Q ss_pred cC-CCeEEEEecCCCCCceeEEEEEEEeCCCceEe
Q 028785 113 KS-LQTLDWIIESDVPTATYFVRAYALNAERHEVA 146 (204)
Q Consensus 113 ~~-~gs~~~tl~~dvp~atYfvraya~da~g~~va 146 (204)
.. ...+...++ ..|+|+|.|+=-++.+|||.+.
T Consensus 63 ~~~~~~~~~~l~-~L~~G~YtV~WrvvS~DGH~~~ 96 (104)
T 1lyq_A 63 ADPKSMVIIPRE-PLPAGTYRVDWRAVSSDTHPIT 96 (104)
T ss_dssp SSTTEEEEEESS-CCCSEEEEEEEEECCTTSCCEE
T ss_pred CCCCcEEEEECC-CCCCceEEEEEEEEecCCCccC
Confidence 11 234566665 8999999999999999999653
No 4
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=90.95 E-value=1.1 Score=38.45 Aligned_cols=85 Identities=14% Similarity=0.190 Sum_probs=47.5
Q ss_pred eeeeCCceEEEEeecc--ccCcCCCccccceeEEEEeeccc--cccCc---cccccccCcCcCCCcceeeeccccccCCC
Q 028785 44 VLKAGEDKVTITWGLN--QSLAAGTDSAYKTMKLQLCFAPV--SQKDR---AWRKTEDHLNKDKTCSFKIVEKPYNKSLQ 116 (204)
Q Consensus 44 vl~aG~D~itvtw~ln--~t~~ag~d~~~ktvkvkLCYap~--SQvdR---~WRK~~d~l~kdK~Cq~ki~~k~y~~~~g 116 (204)
.+.+| |+|++.|... ... - -.+.+-|=..|. ...|. .|-|=...=-.+..=+| ........++
T Consensus 90 ~v~AG-~~v~~~~~~~~~~~~-~------GP~~~Ylak~~~~~~~~d~~g~~WFKI~e~G~~~~~g~W--~~~~li~~~~ 159 (249)
T 2vtc_A 90 TAAAG-SNIVFQWGPGVWPHP-Y------GPIVTYVVECSGSCTTVNKNNLRWVKIQEAGINYNTQVW--AQQDLINQGN 159 (249)
T ss_dssp EEETT-CEEEEEEESSCCCCC-S------SCEEEEEEECSSCGGGCCGGGCEEEEEEEECEETTTTEE--HHHHHHHTTS
T ss_pred EECCC-CEEEEEEeccccccC-C------CcHHHhhhcCCccccccCCCCCCEEEEEeecCCCCCCcc--cchhhhccCC
Confidence 56777 8899999873 111 2 366677755552 23332 35443322000000001 0111112357
Q ss_pred eEEEEecCCCCCceeEEEEEEE
Q 028785 117 TLDWIIESDVPTATYFVRAYAL 138 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~ 138 (204)
+++++||.|+|++.|-+|.=.+
T Consensus 160 ~~~~tIP~~l~~G~YLlR~E~i 181 (249)
T 2vtc_A 160 KWTVKIPSSLRPGNYVFRHELL 181 (249)
T ss_dssp EEEEECCTTBCSEEEEEEEEEE
T ss_pred eeEEEcCCCCCCcceEEEEEee
Confidence 8999999999999999998765
No 5
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=87.79 E-value=2.2 Score=31.72 Aligned_cols=71 Identities=18% Similarity=0.232 Sum_probs=44.1
Q ss_pred EecCCCceeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeeccccccCCC
Q 028785 37 TTTKRGQVLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPYNKSLQ 116 (204)
Q Consensus 37 as~~~g~vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y~~~~g 116 (204)
.+|.+|+++.+| +.|+|+ .+++-+-|.- ..|.+.+.- .+ +..| ...||
T Consensus 5 tsP~~ga~v~~g-~~v~i~--a~A~D~dg~V---~kVef~vdg---~~-----------vg~d-------t~apy----- 52 (98)
T 3pe9_A 5 TAPKSNVVAYGN-EFLKIT--ATASDSDGKI---SRVDFLVDG---EV-----------IGSD-------REAPY----- 52 (98)
T ss_dssp EECCTTCCEETT-SEEEEE--EEECCSSSCE---EEEEEEETT---EE-----------EEEE-------CSSSE-----
T ss_pred eeCCCcCEEcCC-CEEEEE--EEEEeCCCCE---EEEEEEECC---EE-----------eccc-------ccCCE-----
Confidence 489999999999 567776 6655433311 244443321 10 1111 11333
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
+++|+.. .|.|.++|-+.|.+|.
T Consensus 53 ~~~w~~~----~G~htl~a~AtD~~G~ 75 (98)
T 3pe9_A 53 EYEWKAV----EGNHEISVIAYDDDDA 75 (98)
T ss_dssp EEEEECC----SEEEEEEEEEEETTCC
T ss_pred EEEEEcC----CccEEEEEEEEECCCC
Confidence 6778865 6999999999999996
No 6
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=87.45 E-value=4.5 Score=38.87 Aligned_cols=105 Identities=21% Similarity=0.315 Sum_probs=63.6
Q ss_pred eeCCceEEEEeec-cccCcCCCccccceeEEEEeeccccccCcccc--ccccCcCcCCCcceeeeccccccCCCeEEEEe
Q 028785 46 KAGEDKVTITWGL-NQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWR--KTEDHLNKDKTCSFKIVEKPYNKSLQTLDWII 122 (204)
Q Consensus 46 ~aG~D~itvtw~l-n~t~~ag~d~~~ktvkvkLCYap~SQvdR~WR--K~~d~l~kdK~Cq~ki~~k~y~~~~gs~~~tl 122 (204)
+.| |+++++|.. |+.-.--.+..|-+|.- | +.+-.|. ---||=+-+-.=+|+-...++. .=.++|++
T Consensus 535 ~~g-~~v~~~f~~~~p~n~~~~~~t~~~ve~-~------~~~~~w~~~~v~~D~d~~t~~~w~r~~~~~s--~~~~~W~i 604 (646)
T 2zws_A 535 RIG-DKVTVAFVTGHPKNDLRTEKTFLEVVN-I------GKDGKQTPVTVATDNDWDTQYRWERVGISAS--KATISWSI 604 (646)
T ss_dssp ETT-CEEEEEEECCCGGGCCCTTSCSEEEEE-E------ESSSCCCCEEEEETTSTTEEEEEEEETTTEE--EEEEEEEC
T ss_pred cCC-CEEEEEEEccCCCcccccCCceEEEEE-e------cCCCceEEEEEecCCCccEEEEEEeCCCCce--EEEEEEEC
Confidence 345 788888654 33222236677777763 2 3344587 5544333232234433322222 23789999
Q ss_pred cCCCCCceeEEEEEEE--e-CCCceEeecccCCCCcccceEEEEeec
Q 028785 123 ESDVPTATYFVRAYAL--N-AERHEVAYGQSTNDQKTTNLFDIQAIT 166 (204)
Q Consensus 123 ~~dvp~atYfvraya~--d-a~g~~vaYGqs~~~~~ttn~F~V~~it 166 (204)
+.|.|+++|-||-+.- . ..|.-..|--++ +.|+|...|
T Consensus 605 ~~~~~~g~yRi~~~g~~k~~~~g~~~~~~g~s------~~f~v~~~~ 645 (646)
T 2zws_A 605 PPGTEPGHYYIRHYGNAKNFWTQKISEIGGST------RSFEVLGTT 645 (646)
T ss_dssp CTTCCSEEEEEEEEEEEECTTTCCEEEEEEEC------CCEEEECCC
T ss_pred CCCCCCcceEEEEEcccccccCCCceeeEEec------ccEEEeccC
Confidence 9999999999999995 3 457777774444 239987544
No 7
>4eis_A Polysaccharide monooxygenase-3; GH61, PMO, cellulase, biofuels, CBM33, copper monooxygenase, peroxide, superoxide, CBP21, beta-sandwich fold; HET: HIC DAH NAG; 1.37A {Neurospora crassa} PDB: 4eis_B*
Probab=86.23 E-value=4.1 Score=34.76 Aligned_cols=85 Identities=18% Similarity=0.326 Sum_probs=46.5
Q ss_pred eeeeCCceEEEEeeccccCcCCCccccceeEEEEeecc---ccccC-----ccccccccC-cCcCCCcceeeeccccccC
Q 028785 44 VLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAP---VSQKD-----RAWRKTEDH-LNKDKTCSFKIVEKPYNKS 114 (204)
Q Consensus 44 vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap---~SQvd-----R~WRK~~d~-l~kdK~Cq~ki~~k~y~~~ 114 (204)
.+.|| |+|++.|..-...-.| -|.+=|=-.| .+..| -.|=|=.++ +..+ .=+| ....+...
T Consensus 64 ~V~AG-~~v~~~w~~w~~sH~G------Pv~~Ylak~~~~~~~~~d~~~sg~~WFKI~e~G~~~~-~~~W--~~~~l~~n 133 (225)
T 4eis_A 64 SAAAG-STVTLRWTIWPDSHVG------PVITYMARCPDTGCQDWTPSASDKVWFKIKEGGREGT-SNVW--AATPLMTA 133 (225)
T ss_dssp EEETT-CEEEEEESCCCTTCCC------CEEEEEEECCTTCGGGCCCCTTCCCBEEEEEECBCTT-SSCB--TTGGGGSS
T ss_pred EECCC-CEEEEEEEcCCCCCCC------cceeeeeeCCCCCcccccCCCCCccEEEEeeccccCC-CCcc--cchhhhcc
Confidence 45667 8999999863221113 3445454444 23333 236554432 1100 0011 11112223
Q ss_pred CCeEEEEecCCCCCceeEEEEEEE
Q 028785 115 LQTLDWIIESDVPTATYFVRAYAL 138 (204)
Q Consensus 115 ~gs~~~tl~~dvp~atYfvraya~ 138 (204)
+++++++||.++|++.|-+|.=.+
T Consensus 134 ~~~~~~~IP~~l~~G~YllR~E~I 157 (225)
T 4eis_A 134 PANYEYAIPSCLKPGYYLVRHEII 157 (225)
T ss_dssp SCEEEEECCTTBCSEEEEEEEEEE
T ss_pred cCceeEeccCCCCCcceEEEEeec
Confidence 578999999999999999997443
No 8
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=80.87 E-value=1.9 Score=33.10 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=26.5
Q ss_pred cCCCeEEEEecCC----CCCceeEEEEEEEeCCCceE
Q 028785 113 KSLQTLDWIIESD----VPTATYFVRAYALNAERHEV 145 (204)
Q Consensus 113 ~~~gs~~~tl~~d----vp~atYfvraya~da~g~~v 145 (204)
++..+|+|+--.+ +|++.|.+++-+.|.+|..+
T Consensus 63 aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~d~~g~~~ 99 (138)
T 3c12_A 63 AGEVSFAWDGTDANGNRMAAGKYGITATQTDTAGAKS 99 (138)
T ss_dssp SEEEEEEECSBCTTSCBCCSEEEEEEEEEEETTCCEE
T ss_pred CceEEEEECCcCCCCCCCCCceEEEEEEEEECCCCEE
Confidence 3346888887654 99999999999999888755
No 9
>4eir_A Polysaccharide monooxygenase-2; GH61, PMO, cellulase, biofuels copper monooxygenase, peroxide, superoxide, CBP21, beta-SAN fold, secreted; HET: HIC NAG GOL; 1.10A {Neurospora crassa}
Probab=76.85 E-value=2.3 Score=36.17 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=21.1
Q ss_pred CCeEEEEecCCCCCceeEEEEEEE
Q 028785 115 LQTLDWIIESDVPTATYFVRAYAL 138 (204)
Q Consensus 115 ~gs~~~tl~~dvp~atYfvraya~ 138 (204)
+++++++||.++|++.|-+|.=.+
T Consensus 131 ~~~~~~~iP~~l~~G~YllR~E~I 154 (223)
T 4eir_A 131 KGRHSIKIPECIAPGQYLLRAEMI 154 (223)
T ss_dssp TTEEEEECCTTSCCEEEEEEEEEE
T ss_pred CCeEEEECCCCCCCCceEEEEeee
Confidence 478999999999999999997554
No 10
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=75.77 E-value=1.4 Score=31.72 Aligned_cols=48 Identities=15% Similarity=0.124 Sum_probs=36.5
Q ss_pred EEecCCCCC--ceeEEEEEEEeCCCceEeecccCC--CCcccceEEEEeeccc
Q 028785 120 WIIESDVPT--ATYFVRAYALNAERHEVAYGQSTN--DQKTTNLFDIQAITGR 168 (204)
Q Consensus 120 ~tl~~dvp~--atYfvraya~da~g~~vaYGqs~~--~~~ttn~F~V~~itg~ 168 (204)
..|+.|.|. ++.-.|+-+.|+|. ++.|.=+.+ +....+.|.|.+.+|.
T Consensus 7 ~~V~En~~~~~g~~v~~v~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~ 58 (99)
T 3k6d_A 7 ISIPENQRIPFPKIVGRVVVSDRIP-GSKIKLYGKGVDQEPKGIFKINENSGE 58 (99)
T ss_dssp EEEETTCCSCSSEEEEECBCSSCCT-TCEEEEESBTTTBSSTTSEEECTTTCE
T ss_pred EEEeCCCCCCCCcEEEEEEEECCCC-cEEEEEecCcCCCCCCCEEEEECCceE
Confidence 467899998 99999999888888 789977652 2233567999887763
No 11
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=75.35 E-value=2.4 Score=30.36 Aligned_cols=48 Identities=17% Similarity=0.269 Sum_probs=35.6
Q ss_pred EEecCCCCCc--eeEEEEEEEeCCCceEeecccCC--CCcccceEEEEeeccc
Q 028785 120 WIIESDVPTA--TYFVRAYALNAERHEVAYGQSTN--DQKTTNLFDIQAITGR 168 (204)
Q Consensus 120 ~tl~~dvp~a--tYfvraya~da~g~~vaYGqs~~--~~~ttn~F~V~~itg~ 168 (204)
..|+.|.|.+ ++-.++-+.|+|. ++.|.=+.+ +....++|.|.+.+|.
T Consensus 7 ~~v~EN~~~g~~~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~ 58 (99)
T 3k6i_A 7 ILIPENQRPPFPRSVGKVIRSEGTE-GAKFRLSGKGVDQDPKGIFRINEISGD 58 (99)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCS-SEEEEEESBTTTBSSTTSEEECTTTCE
T ss_pred EEEeCCCCCCCCeEEEEEEEEcCCC-eEEEEEeCCCCCCCcCCEEEEECCCcE
Confidence 3567899886 8888888988888 799977653 1223478999888763
No 12
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=75.15 E-value=20 Score=25.58 Aligned_cols=27 Identities=22% Similarity=0.219 Sum_probs=21.4
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
...+++..=.|..+|.+|+.+++..|.
T Consensus 67 ~~~~~v~~L~p~t~Y~frV~A~N~~G~ 93 (112)
T 1bpv_A 67 ENEFTVSGLTEDAAYEFRVIAKNAAGA 93 (112)
T ss_dssp SSEEEECSCCSSCCEEEEEEEECTTSC
T ss_pred cCEEEECCCCCCCEEEEEEEEEECCCC
Confidence 345777766688899999999988874
No 13
>3zud_A GH61 isozyme A; hydrolase, degradation of recalcitrant biomass; HET: HIC NAG TAM; 1.25A {Thermoascus aurantiacus} PDB: 2yet_A*
Probab=74.01 E-value=2.7 Score=36.00 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=21.0
Q ss_pred CCeEEEEecCCCCCceeEEEEEEE
Q 028785 115 LQTLDWIIESDVPTATYFVRAYAL 138 (204)
Q Consensus 115 ~gs~~~tl~~dvp~atYfvraya~ 138 (204)
+++++++||.++|++.|.+|.=.+
T Consensus 138 ~~~~~~~IP~~l~~G~YllR~E~I 161 (228)
T 3zud_A 138 NNSWTVTIPTTIAPGNYVLRHEII 161 (228)
T ss_dssp TSEEEEECCSSBCCEEEEEEEEEE
T ss_pred CCccceeccCCCCCCceEEEeeec
Confidence 478999999999999999997644
No 14
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=72.32 E-value=1.3 Score=35.48 Aligned_cols=47 Identities=19% Similarity=0.417 Sum_probs=37.8
Q ss_pred EEecCCCCCceeEEEEEEEeCCCceEeecccCCCCcccceEEEEeeccc
Q 028785 120 WIIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 120 ~tl~~dvp~atYfvraya~da~g~~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
..|+.|.|.++.-.++.+.|+++..+.|.-+.. ...++|.|.+-+|.
T Consensus 17 ~~V~E~~~~Gt~v~~v~A~D~D~~~~~y~i~~~--~~~~~F~Id~~tG~ 63 (210)
T 3mvs_A 17 LLISEDTPVGSSVTQLLARDMDNDPLVFGVSGE--EASRFFAVEPDTGV 63 (210)
T ss_dssp EEEETTCCTTCEEEECCEECTTCCCCEEEEESH--HHHHHEEECTTTCE
T ss_pred EEEeCCCCCCCEEEEEEEEeCCCCcEEEEEeCC--CCCCcEEEeCCCCE
Confidence 479999999999999999999988899987652 22357988877663
No 15
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.82 E-value=1.7 Score=31.72 Aligned_cols=52 Identities=10% Similarity=0.176 Sum_probs=38.3
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC---ceEeecccCCCCcccceEEEEeeccc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER---HEVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g---~~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
.....|++|.|.++.-.|+.|.|+|. .++.|-=........++|.|.+.+|.
T Consensus 18 ~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~ 72 (119)
T 2yst_A 18 VYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGW 72 (119)
T ss_dssp EEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCE
T ss_pred cEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceE
Confidence 56788999999999999999988874 46788655432223467998877763
No 16
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=67.31 E-value=3.4 Score=29.69 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=34.0
Q ss_pred EEecCCCCC--ceeEEEEEEEeCCCceEeecccCCC--CcccceEEEEeecc
Q 028785 120 WIIESDVPT--ATYFVRAYALNAERHEVAYGQSTND--QKTTNLFDIQAITG 167 (204)
Q Consensus 120 ~tl~~dvp~--atYfvraya~da~g~~vaYGqs~~~--~~ttn~F~V~~itg 167 (204)
..|+.|.|. +++-.|+-+.|+|. .+.|.=+.+. ....++|.|.+.+|
T Consensus 8 ~~V~EN~~~~~g~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG 58 (100)
T 3k6f_A 8 ILIPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTG 58 (100)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCT-TCEEEEEEBTTTBSSTTSEEECTTTC
T ss_pred EEEeCCCCCCCCcEEEEEEEEcCCC-CEEEEEeCCCCCCCcCCEEEEECCCC
Confidence 356688887 78888888888887 6888765421 22346798888776
No 17
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=64.43 E-value=32 Score=23.76 Aligned_cols=26 Identities=27% Similarity=0.126 Sum_probs=20.3
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|.-+|.+|+.+.+..|
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n~~G 100 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALNMLG 100 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEETTE
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCC
Confidence 45667765568889999999998766
No 18
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=62.79 E-value=0.6 Score=30.97 Aligned_cols=19 Identities=26% Similarity=0.168 Sum_probs=11.6
Q ss_pred ehhhhhhhhhhHHHhHhhh
Q 028785 182 FSIVALFGFFFHEKRKARM 200 (204)
Q Consensus 182 FSvv~L~~ff~~Ekrk~k~ 200 (204)
+.++.+.+||++.+|+.++
T Consensus 24 ~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 24 LLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp HHHHHHHHHHHHHTTTCCS
T ss_pred HHHHHHHHHHHhhhhHhhc
Confidence 3356666677776666544
No 19
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=62.48 E-value=34 Score=23.32 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=20.4
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
...++|..=.|..+|.+|+.+.+..|.
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n~~G~ 101 (121)
T 1wf5_A 75 ATSVTVKGLVPARSYQFRLCAVNDVGK 101 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESSCE
T ss_pred ccEEEECCcCCCCEEEEEEEEEcCCcc
Confidence 345666655677899999999987774
No 20
>2ag4_A GM2-AP, ganglioside GM2 activator; complex of single chain lipid and fatty acids, lipid binding; HET: LP3 OLA; 1.80A {Homo sapiens} SCOP: b.95.1.1 PDB: 1tjj_A* 2af9_A* 2ag2_A* 1pu5_A* 2ag9_A* 1g13_A* 1pub_A* 2agc_A*
Probab=61.02 E-value=41 Score=26.56 Aligned_cols=25 Identities=12% Similarity=0.138 Sum_probs=19.0
Q ss_pred EecCCCCCceeEEEEEEEeCCCceEe
Q 028785 121 IIESDVPTATYFVRAYALNAERHEVA 146 (204)
Q Consensus 121 tl~~dvp~atYfvraya~da~g~~va 146 (204)
.||.-+|+|.|.+++...| +|.+++
T Consensus 129 ~lP~~l~~G~Y~v~~~~~~-~~~~l~ 153 (164)
T 2ag4_A 129 ELPSWLTTGNYRIESVLSS-SGKRLG 153 (164)
T ss_dssp CCCTTCSSEEEEEEEEEEE-TTEEEE
T ss_pred cccCccCCceEEEEEEEec-CCCEEE
Confidence 4556678999999998865 776554
No 21
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=58.90 E-value=0.64 Score=30.98 Aligned_cols=21 Identities=5% Similarity=0.216 Sum_probs=13.6
Q ss_pred eehhhhhhhhhhHHHhHhhhh
Q 028785 181 VFSIVALFGFFFHEKRKARMS 201 (204)
Q Consensus 181 ~FSvv~L~~ff~~Ekrk~k~~ 201 (204)
++=++.|.+|+|+.+|+.+++
T Consensus 23 l~vi~~l~~~~~~RRR~~~~k 43 (44)
T 2jwa_A 23 LVVVLGVVFGILIKRRQQKIR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHCSCCC
T ss_pred HHHHHHHHHHhheehhhhhcc
Confidence 555666777777777765544
No 22
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=58.85 E-value=1.7 Score=28.80 Aligned_cols=28 Identities=18% Similarity=0.259 Sum_probs=16.2
Q ss_pred eeeeeee---eehhhhhhhhhhHHHhHhhhh
Q 028785 174 IASVCFS---VFSIVALFGFFFHEKRKARMS 201 (204)
Q Consensus 174 ia~~~fS---~FSvv~L~~ff~~Ekrk~k~~ 201 (204)
||+++.. ++-++.|.+||++.+|+.+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~k 42 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 4555443 334566777777776665543
No 23
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=58.56 E-value=9.7 Score=29.14 Aligned_cols=31 Identities=16% Similarity=0.242 Sum_probs=23.9
Q ss_pred CCeEEEEecCC----CCCceeEEEEEEEeCCCceEe
Q 028785 115 LQTLDWIIESD----VPTATYFVRAYALNAERHEVA 146 (204)
Q Consensus 115 ~gs~~~tl~~d----vp~atYfvraya~da~g~~va 146 (204)
..+|+|+--.+ +|++.|.+++.+. .+|..+.
T Consensus 63 ~~~f~WDG~d~~G~~~~~G~Y~~~v~a~-~~g~~~~ 97 (138)
T 3osv_A 63 SVSFMWDGKDSSGNIMPPGTYKFEAQTS-IDGKTYG 97 (138)
T ss_dssp EEEEEECSBCTTSCBCCSEEEEEEEEEE-ETTEEEE
T ss_pred eEEEEECCcCCCCCCCCCccEEEEEEEE-cCCeEEE
Confidence 35899987543 9999999999997 5676544
No 24
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=57.43 E-value=50 Score=24.49 Aligned_cols=26 Identities=23% Similarity=0.045 Sum_probs=19.9
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...+++..=.|...|.+|+.+.+..|
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 189 (209)
T 2vkw_A 164 SDHVMLKSLDWNAEYEVYVVAENQQG 189 (209)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTE
T ss_pred ccEEEecCCCCCCEEEEEEEEEeCCc
Confidence 34567766667778999999997776
No 25
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=56.27 E-value=30 Score=24.33 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=22.2
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
....++|..=.|...|.+|+.+++..|.
T Consensus 77 ~~~~~~v~~L~p~t~Y~frV~A~N~~G~ 104 (124)
T 1wis_A 77 DARSMEVPDLNPFTCYSFRMRQVNIVGT 104 (124)
T ss_dssp TCSEEEECSCCTTSEECCCCEEECSSCB
T ss_pred CceEEEeCCCCCCCEEEEEEEEEECCcc
Confidence 3457788766789999999999987663
No 26
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.62 E-value=41 Score=22.14 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=18.9
Q ss_pred EEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 118 LDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
..++|..=.|...|.+|+.+++..|.
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~ 86 (106)
T 2dju_A 61 TRYSIGGLSPFSEYAFRVLAVNSIGR 86 (106)
T ss_dssp SEEEEESCCTTCEEEEEEEEECSSCB
T ss_pred cEEEEeCCCCCcEEEEEEEEEeCCcc
Confidence 34566544577779999999987763
No 27
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=55.25 E-value=5.1 Score=30.92 Aligned_cols=18 Identities=11% Similarity=0.434 Sum_probs=14.0
Q ss_pred CCCceeEEEEEEEeCCCc
Q 028785 126 VPTATYFVRAYALNAERH 143 (204)
Q Consensus 126 vp~atYfvraya~da~g~ 143 (204)
++||+||+++|..+.+|.
T Consensus 95 ~~pGkYYl~Vy~y~~~g~ 112 (119)
T 1nqj_A 95 LRPGKYYLLVYKYSGSGN 112 (119)
T ss_dssp ECSEEEEEEEEEEESCEE
T ss_pred cCCcEEEEEEEEeCCCce
Confidence 569999999998644554
No 28
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=54.30 E-value=37 Score=22.73 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=20.1
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|.-.|.+|+.+.+..|
T Consensus 65 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 90 (111)
T 1x5l_A 65 TTRATVSGLKPGTRYVFQVRARTSAG 90 (111)
T ss_dssp SSEEEECSCCTTCEEEECEEEEETTE
T ss_pred CCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 34667765567888999999998776
No 29
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=53.87 E-value=36 Score=23.65 Aligned_cols=18 Identities=28% Similarity=0.390 Sum_probs=14.1
Q ss_pred CCCceeEEEEEEEeCCCc
Q 028785 126 VPTATYFVRAYALNAERH 143 (204)
Q Consensus 126 vp~atYfvraya~da~g~ 143 (204)
.|.-.|.+|+.+.+..|.
T Consensus 82 ~p~t~Y~frV~A~n~~G~ 99 (127)
T 1uey_A 82 SPYVNYSFRVMAVNSIGK 99 (127)
T ss_dssp CTTCEECCEEEEEESSCB
T ss_pred CCCCEEEEEEEEEeCCcc
Confidence 466779999999977663
No 30
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=53.18 E-value=60 Score=23.25 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=19.3
Q ss_pred EEEEecCCCCCceeEEEEEEEeCCC
Q 028785 118 LDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~g 142 (204)
..+++..=.|...|.+|+.+.+..|
T Consensus 158 ~~~~~~~L~p~t~Y~~~V~A~n~~G 182 (197)
T 3lpw_A 158 TEATITGLIQGEEYSFRVSAQNEKG 182 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTE
T ss_pred cEEEeCCcCCCCEEEEEEEEEeCCc
Confidence 3466666667779999999998776
No 31
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.14 E-value=5.3 Score=29.09 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=38.0
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCC---ceEeecccCC-CCcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAER---HEVAYGQSTN-DQKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g---~~vaYGqs~~-~~~ttn~F~V~~itg~ 168 (204)
......|+.|.|.++.-.|+-|.|+|. .++.|--... .....+.|.|.+.+|.
T Consensus 17 ~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~ 73 (114)
T 2ee0_A 17 GQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGL 73 (114)
T ss_dssp SEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCE
T ss_pred CcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeE
Confidence 356788999999999999999988873 4688854331 1123467988887763
No 32
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=50.29 E-value=14 Score=26.02 Aligned_cols=22 Identities=14% Similarity=0.202 Sum_probs=20.0
Q ss_pred CeEEEEecCCCCCceeEEEEEE
Q 028785 116 QTLDWIIESDVPTATYFVRAYA 137 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya 137 (204)
.+.++.|+.+.+.|.|.|+++.
T Consensus 63 ~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 63 KQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EEEEEECCSSCCCEEEEEEEEC
T ss_pred EEEEEECCCCCCCeeEEEEEEE
Confidence 4789999999999999999986
No 33
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=49.83 E-value=56 Score=21.94 Aligned_cols=24 Identities=21% Similarity=0.113 Sum_probs=19.6
Q ss_pred EEEecCCCCCceeEEEEEEEeCCC
Q 028785 119 DWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 119 ~~tl~~dvp~atYfvraya~da~g 142 (204)
.++|..=.|.-.|.+|+.+.+..|
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G 87 (108)
T 2dm4_A 64 FTEIKNLLVNTLYTVRVAAVTSRG 87 (108)
T ss_dssp EEEECSCCSSCEEEEEEEEEESSC
T ss_pred EEEeCCCCCCCEEEEEEEEECCCc
Confidence 667766668889999999998777
No 34
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.55 E-value=57 Score=21.97 Aligned_cols=26 Identities=27% Similarity=0.227 Sum_probs=19.3
Q ss_pred EEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 118 LDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
..++|..=.|.-.|.+|+.+.+..|.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~ 101 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGD 101 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCB
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCcc
Confidence 44566555677789999999987763
No 35
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.81 E-value=64 Score=22.04 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=20.9
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=-|...|.+|+.+.+..|
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 98 (119)
T 2ee2_A 73 EYSARLENLLPDTQYFIEVGACNSAG 98 (119)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSS
T ss_pred EeEEEECCCCCCCEEEEEEEEEcCCc
Confidence 35677776668889999999998776
No 36
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=47.69 E-value=17 Score=28.88 Aligned_cols=48 Identities=21% Similarity=0.281 Sum_probs=37.6
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCC---CceEeecccCCCCcccceEEEEeecc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAE---RHEVAYGQSTNDQKTTNLFDIQAITG 167 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~---g~~vaYGqs~~~~~ttn~F~V~~itg 167 (204)
......++.|.|.++.-.++.+.|+| ...+.|--.... +.|.|.+.+|
T Consensus 112 ~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~----~~F~Id~~tG 162 (210)
T 3mvs_A 112 QPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPS----PFFAIDSARG 162 (210)
T ss_dssp CSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCC----SSEEECTTTC
T ss_pred ceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCC----CCEEEeCCcE
Confidence 45688899999999999999999888 456888765532 4688877666
No 37
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=46.73 E-value=14 Score=31.19 Aligned_cols=52 Identities=13% Similarity=0.192 Sum_probs=38.9
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCceEeecccCCCCcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
......|+.|.|.++.-.++.+.|+++.++.|-=.. .....+.|.|.+.+|.
T Consensus 217 ~~y~~~v~En~~~gt~v~~v~A~D~Dn~~i~Y~i~~-~~~~~~~F~Id~~tG~ 268 (316)
T 3ubf_A 217 PSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKA-QGQGAGTFNIGPTSGI 268 (316)
T ss_dssp SSEEEEEETTCCTTCEEEECCEECTTCCCEEEEEEE-ESSCTTTEEECTTTCE
T ss_pred CCceEEEeCCCCCCCEEEEEEEEeCCCCEEEEEEEc-CCCCCCeEEEECCeEE
Confidence 345678889999999999999999999999997531 0112356988876663
No 38
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.65 E-value=67 Score=21.62 Aligned_cols=27 Identities=30% Similarity=0.303 Sum_probs=20.6
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
...+++..=.|..+|.+|+.+++..|.
T Consensus 64 ~~~~~v~~L~p~t~Y~frV~A~n~~G~ 90 (110)
T 2yuw_A 64 KTKFTITGLPTDAKIFVRVKAVNAAGA 90 (110)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCcC
Confidence 346677655688899999999987763
No 39
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=43.56 E-value=74 Score=21.58 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=40.6
Q ss_pred eeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeeccccccCCCeEEEEec
Q 028785 44 VLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPYNKSLQTLDWIIE 123 (204)
Q Consensus 44 vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y~~~~gs~~~tl~ 123 (204)
+...+.++|++.|.-.. .. | . .-..-.|.|..... +..|+. + +.. ....++|.
T Consensus 26 ~~~~~~~sv~l~W~~p~-~~-~--~--~i~~Y~v~~~~~~~-~~~~~~---------------~---~~~--~~~~~~v~ 78 (118)
T 1x3d_A 26 IANRTKNSLTLQWKAPS-DN-G--S--KIQNFVLEWDEGKG-NGEFCQ---------------C---YMG--SQKQFKIT 78 (118)
T ss_dssp EEEEETTEEEEECCCCC-CC-S--S--CEEEEEEEECTTTS-SSCCEE---------------E---EEE--SCSEEEEE
T ss_pred EeccCCCEEEEEECCCC-CC-C--C--cceEEEEEEecCCC-CCCeEE---------------e---ecc--CCcEEEeC
Confidence 45567899999998653 11 1 1 23444555543221 123321 1 111 12345666
Q ss_pred CCCCCceeEEEEEEEeCCC
Q 028785 124 SDVPTATYFVRAYALNAER 142 (204)
Q Consensus 124 ~dvp~atYfvraya~da~g 142 (204)
.=.|...|.+|+.+.+..|
T Consensus 79 ~L~p~t~Y~frV~A~n~~G 97 (118)
T 1x3d_A 79 KLSPAMGCKFRLSARNDYG 97 (118)
T ss_dssp SCCTTCEEEEECCEEESSC
T ss_pred CCCCCCEEEEEEEEEECCC
Confidence 5557788999999998777
No 40
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=43.20 E-value=36 Score=22.38 Aligned_cols=26 Identities=15% Similarity=0.074 Sum_probs=20.3
Q ss_pred EEEecCCCCCceeEEEEEEEeCCCce
Q 028785 119 DWIIESDVPTATYFVRAYALNAERHE 144 (204)
Q Consensus 119 ~~tl~~dvp~atYfvraya~da~g~~ 144 (204)
.+++..=.|..+|++|+.++|..|.+
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A~n~~G~~ 77 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKAKDAAGNV 77 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEEETTTEE
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCc
Confidence 45666556788999999999988853
No 41
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=42.44 E-value=1e+02 Score=22.82 Aligned_cols=26 Identities=12% Similarity=0.291 Sum_probs=19.6
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|...|.+|+.+.+..|
T Consensus 163 ~~~~~i~~L~p~t~Y~~~V~A~n~~g 188 (215)
T 1bqu_A 163 RSSFTVQDLKPFTEYVFRIRCMKEDG 188 (215)
T ss_dssp CSEEEECSCCSSEEEEEEEEEEETTS
T ss_pred cceEEeCCCCCCCEEEEEEEEccCCC
Confidence 34567765557788999999997766
No 42
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=38.61 E-value=84 Score=20.76 Aligned_cols=26 Identities=19% Similarity=0.173 Sum_probs=19.7
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|.-.|.+|+.+.+..|
T Consensus 61 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 86 (107)
T 2dn7_A 61 DQHFTVTGLHKGTTYIFRLAAKNRAG 86 (107)
T ss_dssp CCEEEEECCCTTCEEEEEEEEEETTE
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCc
Confidence 34566766567788999999997765
No 43
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=38.22 E-value=15 Score=29.28 Aligned_cols=53 Identities=21% Similarity=0.269 Sum_probs=39.2
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCC-----ceEeecccCCC--CcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAER-----HEVAYGQSTND--QKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g-----~~vaYGqs~~~--~~ttn~F~V~~itg~ 168 (204)
......|+.|.|.++.-.++.+.|+|. ..+.|-=.... ....++|.|.+.+|.
T Consensus 111 ~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~ 170 (218)
T 3k5r_A 111 GPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGD 170 (218)
T ss_dssp CSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCE
T ss_pred CceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccE
Confidence 456788999999999999999998885 56888654311 122367999887774
No 44
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=38.08 E-value=21 Score=28.27 Aligned_cols=53 Identities=17% Similarity=0.294 Sum_probs=37.9
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCc------eEeecccCC--CCcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERH------EVAYGQSTN--DQKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~------~vaYGqs~~--~~~ttn~F~V~~itg~ 168 (204)
......|+.|.|.++.-.++.+.|+|.. .+.|-=... .....+.|.|.+.+|.
T Consensus 111 ~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~ 171 (213)
T 3qrb_A 111 EVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGV 171 (213)
T ss_dssp SEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCE
T ss_pred CceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcE
Confidence 4678889999999999999999988753 677754321 1113457998877663
No 45
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.84 E-value=89 Score=20.86 Aligned_cols=27 Identities=22% Similarity=0.170 Sum_probs=20.5
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
...++|..=-|.-.|.+|+.+.+..|.
T Consensus 68 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 94 (114)
T 2ede_A 68 RLTHQIMDLNLDTMYYFRIQARNSKGV 94 (114)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECSSCB
T ss_pred ceEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 455677655678889999999987763
No 46
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=37.71 E-value=24 Score=28.43 Aligned_cols=48 Identities=17% Similarity=0.210 Sum_probs=35.9
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCC----C--ceEeecccCCCCcccceEEEEeeccc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAE----R--HEVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~----g--~~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
.....++.|.|.++.-.|+.+.|+| | .++.|--... ++.|.|.+.+|.
T Consensus 111 ~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~----~~~F~Id~~tG~ 164 (215)
T 2a4e_A 111 IYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEG----QPYFSVEAQTGI 164 (215)
T ss_dssp SEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEES----TTTEEECTTTCE
T ss_pred ceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCC----CCcEEEeCCccE
Confidence 5677899999999999999999888 4 3678864432 146888876663
No 47
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=37.47 E-value=1.4e+02 Score=22.94 Aligned_cols=47 Identities=13% Similarity=0.180 Sum_probs=27.4
Q ss_pred CccccccccCcCcCCCcceeeeccccccCCCeEEEE--ecCCCCCceeEEEEEEE
Q 028785 86 DRAWRKTEDHLNKDKTCSFKIVEKPYNKSLQTLDWI--IESDVPTATYFVRAYAL 138 (204)
Q Consensus 86 dR~WRK~~d~l~kdK~Cq~ki~~k~y~~~~gs~~~t--l~~dvp~atYfvraya~ 138 (204)
.|-||=.++...-- -+-...+.++ .+.+|. ++..+++|.|.++|+-+
T Consensus 54 ~~VwrwS~~~~FtQ-----a~~~~tl~pG-E~~~f~~~w~~~~~pG~Ytl~a~l~ 102 (120)
T 3isy_A 54 KERYRYSKEKMFTQ-----AFQNLTLESG-ETYDFSDVWKEVPEPGTYEVKVTFK 102 (120)
T ss_dssp CEEEETTTTCCCCC-----CCEEEEECTT-CEEEEEEEESSCCCSEEEEEEEEEC
T ss_pred CEEEEccccchhhh-----hhceEEECCC-CEEEEEEEeCCCCCCccEEEEEEEE
Confidence 57787665532211 1222333443 444444 44568899999999987
No 48
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=37.03 E-value=87 Score=20.51 Aligned_cols=26 Identities=19% Similarity=0.157 Sum_probs=19.9
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|...|.+|+.+++..|
T Consensus 54 ~~~~~l~~L~p~t~Y~~~V~A~~~~g 79 (94)
T 1j8k_A 54 EDTAELQGLRPGSEYTVSVVALHDDM 79 (94)
T ss_dssp CCEEEECSCCCCSEEEEEEEECSSSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCC
Confidence 34667766668889999999987655
No 49
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=35.58 E-value=27 Score=27.55 Aligned_cols=49 Identities=18% Similarity=0.285 Sum_probs=36.5
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCC----Cc--eEeecccCCCCcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAE----RH--EVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~----g~--~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
......++.|.|.++.-.++.+.|+| |. ++.|--... .+.|.|.+-+|.
T Consensus 109 ~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~----~~~F~Id~~tG~ 163 (207)
T 3lnd_A 109 DVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG----QPYFSVESETGI 163 (207)
T ss_dssp SEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES----GGGEEECTTTCE
T ss_pred CceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC----CCCEEEcCCCcE
Confidence 46778899999999999999999887 32 577755432 236888776653
No 50
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=35.29 E-value=26 Score=29.47 Aligned_cols=49 Identities=16% Similarity=0.327 Sum_probs=34.8
Q ss_pred EEEEecCCCCCceeEEEEEEEeCC-CceEeecccCCCCcccceEEEEeeccc
Q 028785 118 LDWIIESDVPTATYFVRAYALNAE-RHEVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~-g~~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
....|+.|.|.++.-.++.+.|+| |..+.|--... ...+.|.|.+-+|.
T Consensus 113 y~~~v~En~~~gt~v~~v~A~D~D~g~ni~Y~i~~~--~~~~~F~Id~~tG~ 162 (316)
T 3ubf_A 113 MQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRD--RTGGRFEVDERSGV 162 (316)
T ss_dssp EEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEE--ESSSCEEECTTTCE
T ss_pred EEEEEeCCCCCCCEEEEEEEECCCCCCceEEEEEeC--CCCCEEEEECCccE
Confidence 577899999999999999999887 44477754321 12346888766653
No 51
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=34.66 E-value=6.7 Score=28.33 Aligned_cols=50 Identities=14% Similarity=0.277 Sum_probs=35.2
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCc-----eEeecccCCCCcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERH-----EVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~-----~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
+...+.|+.|.|+|++-.++ +.|.+-. .+.|--.+.+ ..++|.|.+-||.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~--~~~~F~Id~~tG~ 57 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKD--RGDLLEVNLQNGI 57 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSS--CSCSEEEETTTTE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCC--CccEEEEECCeEE
Confidence 57889999999999997777 7665432 3566544321 2467999988874
No 52
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=34.52 E-value=1.1e+02 Score=20.98 Aligned_cols=74 Identities=12% Similarity=0.200 Sum_probs=41.5
Q ss_pred eeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeeccccccCCCeEEEEec
Q 028785 44 VLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPYNKSLQTLDWIIE 123 (204)
Q Consensus 44 vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y~~~~gs~~~tl~ 123 (204)
+...+.++|+|+|.-.. .+.|.- ..-++.|......+. .+...+ + ......++|.
T Consensus 36 ~~~~~~~sv~l~W~~p~-~~~g~i-----~~Y~v~~~~~~~~~~-------------~~~~~~----~--~~~~~~~~i~ 90 (130)
T 1wfo_A 36 FPEVRTTSVRLIWQPPA-APNGII-----LAYQITHRLNTTTAN-------------TATVEV----L--APSARQYTAT 90 (130)
T ss_dssp EEEECSSEEEEECCCCS-CCCSCC-----CEEEEEEEESSCCCS-------------CCCEEE----E--CTTCCEEEEE
T ss_pred EEecCCCEEEEEEcCCC-CCCCce-----EEEEEEEEECCCCCc-------------eEEEEE----e--CCCceEEEEc
Confidence 44557899999998653 222322 234555544322111 111001 1 1234566666
Q ss_pred CCCCCceeEEEEEEEeCCC
Q 028785 124 SDVPTATYFVRAYALNAER 142 (204)
Q Consensus 124 ~dvp~atYfvraya~da~g 142 (204)
.=.|.-.|.+|+.+.+..|
T Consensus 91 ~L~p~t~Y~~~V~A~n~~G 109 (130)
T 1wfo_A 91 GLKPESVYLFRITAQTRKG 109 (130)
T ss_dssp SCCSSSEEEEEEEEECSSC
T ss_pred CCCCCCEEEEEEEEEeCCc
Confidence 5567788999999997776
No 53
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=34.21 E-value=1.1e+02 Score=21.48 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=29.0
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCceEeecccCCCCcccceEEEEe
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFDIQA 164 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~~vaYGqs~~~~~ttn~F~V~~ 164 (204)
...++|..=.|..+|.+|+.|+++-|. -.++..+ . .|++++
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N~~G~-~~pS~~S--~----~~~~~~ 110 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVYSNND-NKESNTS--A----KFYLQP 110 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEETTSC-EEECCCC--C----CEEECC
T ss_pred eeEEEeCCCCCCCEEEEEEEEEeCCCC-CCCCCCC--C----CEEeCC
Confidence 456788877789999999999988774 3344433 2 277665
No 54
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=33.72 E-value=1.4e+02 Score=21.92 Aligned_cols=26 Identities=12% Similarity=0.125 Sum_probs=20.6
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|.-.|.+|+.+++..|
T Consensus 173 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 198 (214)
T 2ibg_A 173 ARSFKIAPLETATMYEFKLQSFSAAS 198 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEECSSC
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCc
Confidence 34677776677888999999998777
No 55
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=33.27 E-value=1.1e+02 Score=20.52 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=19.4
Q ss_pred EEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 118 LDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
..+++..=.|..+|.+|+.+.+..|.
T Consensus 72 ~~~~i~~L~p~t~Y~frV~A~n~~G~ 97 (117)
T 1uem_A 72 TLYTVRGLRPNTIYLFMVRAINPQGL 97 (117)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred CEEEECCCCCCCEEEEEEEEECCCcc
Confidence 35666655577789999999987763
No 56
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=32.67 E-value=24 Score=25.17 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=18.1
Q ss_pred EecCCCC--CceeEEEEEEEeCCC--ceEeecccCCCCcccceEEEEeecc
Q 028785 121 IIESDVP--TATYFVRAYALNAER--HEVAYGQSTNDQKTTNLFDIQAITG 167 (204)
Q Consensus 121 tl~~dvp--~atYfvraya~da~g--~~vaYGqs~~~~~ttn~F~V~~itg 167 (204)
.|+.|.| .++.-.++. .|+|. .++.|.=... ...++|.|.+-+|
T Consensus 8 ~v~En~~~p~~~~v~~v~-~D~D~gN~~v~Ysi~~~--~~~~~F~Id~~tG 55 (98)
T 1zxk_A 8 FVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGD--GAGTIFQINDITG 55 (98)
T ss_dssp EECGGGCSSSCEEEEECC-BCCCCC--CEEEEEEET--TBTTTEEECTTTC
T ss_pred EEECCCCCCCCeEEEEEE-ECCCCCCCEEEEEEeCC--CCCCEEEEECCcc
Confidence 3444543 444444443 44442 2455544331 1123455555444
No 57
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=32.27 E-value=12 Score=27.91 Aligned_cols=51 Identities=10% Similarity=0.156 Sum_probs=34.3
Q ss_pred CCeEEEEecCCCCCceeEEEEEEEeCCCc--eE---eecccCCCCcccceEEEEeeccc
Q 028785 115 LQTLDWIIESDVPTATYFVRAYALNAERH--EV---AYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 115 ~gs~~~tl~~dvp~atYfvraya~da~g~--~v---aYGqs~~~~~ttn~F~V~~itg~ 168 (204)
.+...+.|+.|.|++++-.++ +.|.+.. .+ .|--.+.+ ..++|.|.+-||.
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~--~~~~F~Id~~tG~ 65 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSKG--NKQLLQLEQKSGN 65 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSS--SSCSEEECSSSSE
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCC--CCCeEEEECCccE
Confidence 356778999999999998887 7666532 23 56433211 2357999887764
No 58
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=31.83 E-value=23 Score=25.44 Aligned_cols=9 Identities=11% Similarity=0.405 Sum_probs=3.9
Q ss_pred CCeEEEEec
Q 028785 115 LQTLDWIIE 123 (204)
Q Consensus 115 ~gs~~~tl~ 123 (204)
+|.+.|.|.
T Consensus 33 Ng~v~Ysi~ 41 (99)
T 1zvn_A 33 DGSIKYILS 41 (99)
T ss_dssp SSCEEEEEE
T ss_pred CCEEEEEEe
Confidence 344444443
No 59
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=31.66 E-value=1.2e+02 Score=20.42 Aligned_cols=26 Identities=12% Similarity=0.153 Sum_probs=19.4
Q ss_pred EEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 118 LDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
..++|..=.|..+|.+|+.+++..|.
T Consensus 66 ~~~~v~~L~p~t~Y~frV~A~n~~G~ 91 (111)
T 1x5y_A 66 CGFTVKDLPTGARILFRVVGVNIAGR 91 (111)
T ss_dssp SEEEEECCCTTCCEEEEEEEEETTEE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCcC
Confidence 45666555578889999999987663
No 60
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=31.50 E-value=1.1e+02 Score=20.12 Aligned_cols=27 Identities=26% Similarity=0.406 Sum_probs=20.7
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g 142 (204)
....++|..=.|...|.+|+.+.+..|
T Consensus 53 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G 79 (98)
T 3teu_A 53 SSTSVTITGLTPGVEYVVSVYALKDNQ 79 (98)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CcCEEEecCCCCCCEEEEEEEEEeCCC
Confidence 345677776668889999999987666
No 61
>3m7o_A Lymphocyte antigen 86; beta sheet, glycoprotein, immunity, inflammatory response, I immunity, secreted, immune system; HET: NAG L9R NDG; 1.65A {Mus musculus} PDB: 3t6q_C* 3b2d_C* 3rg1_C*
Probab=31.00 E-value=2.2e+02 Score=23.23 Aligned_cols=98 Identities=16% Similarity=0.100 Sum_probs=55.2
Q ss_pred EEEecCCCceeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeeccccccC
Q 028785 35 VTTTTKRGQVLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPYNKS 114 (204)
Q Consensus 35 Vtas~~~g~vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y~~~ 114 (204)
+.++.++--.+.+.--.|++.|-+++... ..|-.+.|++ -..+--.|.-===+...+++-.| |-.++
T Consensus 51 ~~vsi~PC~~~~G~nl~i~a~~Ilr~dI~----~ly~~l~v~~--~~i~l~~~~~~lCe~~~~~~sfC-------p~~KG 117 (162)
T 3m7o_A 51 FGLSIDQCSKQIQSNLNIRFGIILRQDIR----KLFLDITLMA--KGSSILNYSYPLCEEDQPKFSFC-------GRRKG 117 (162)
T ss_dssp CEEEESSCCSEECSSCEEEEEEECSSCCS----EEEEEEEEEE--TTEEEEEEEEEEEETTBSSSSST-------TCCTT
T ss_pred ceEECCCCCCCCCCcEEEEEEEEEcccce----eeEEEEEEEE--CCEEccccccccccCCCCccccC-------CcCCC
Confidence 44455555566666778999999987653 3555555543 33332211100011222444567 33343
Q ss_pred CC---eEEEEecC-CCCCceeEEEEEEEeCCCceE
Q 028785 115 LQ---TLDWIIES-DVPTATYFVRAYALNAERHEV 145 (204)
Q Consensus 115 ~g---s~~~tl~~-dvp~atYfvraya~da~g~~v 145 (204)
.+ ...+.++. .+|+|.|.|-|=+++.|+..+
T Consensus 118 E~v~~~~~v~~p~~e~P~G~Y~v~aea~~~d~~~i 152 (162)
T 3m7o_A 118 EQIYYAGPVNNPGLDVPQGEYQLLLELYNENRATV 152 (162)
T ss_dssp CEEEEEEECCCCEEECCSEEEEEEEEEEETTCCEE
T ss_pred eEEEEEEEeecCceecCCCcEEEEEEEEcCCCCEE
Confidence 32 33455555 699999999998887775433
No 62
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.52 E-value=1.3e+02 Score=20.51 Aligned_cols=26 Identities=15% Similarity=0.038 Sum_probs=19.4
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|.-.|.+|+.+.+..|
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 103 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVG 103 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTB
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCC
Confidence 45566665557788999999997766
No 63
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=29.98 E-value=28 Score=27.87 Aligned_cols=53 Identities=21% Similarity=0.317 Sum_probs=37.7
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCC-----ceEeecccCCC--CcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAER-----HEVAYGQSTND--QKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g-----~~vaYGqs~~~--~~ttn~F~V~~itg~ 168 (204)
......|+.|.|.++.-.++.+.|+|. .++.|-=.... ....+.|.|.+.+|.
T Consensus 111 ~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~ 170 (215)
T 2qvi_A 111 QVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGD 170 (215)
T ss_dssp SEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCE
T ss_pred ceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcE
Confidence 367788999999999999999998874 36777533211 113467999877663
No 64
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=29.94 E-value=1.7e+02 Score=21.60 Aligned_cols=13 Identities=38% Similarity=0.726 Sum_probs=10.3
Q ss_pred eCCceEEEEeecc
Q 028785 47 AGEDKVTITWGLN 59 (204)
Q Consensus 47 aG~D~itvtw~ln 59 (204)
.+.++|+|+|.-.
T Consensus 16 ~~~~si~l~W~~p 28 (211)
T 3p4l_A 16 LSHDTIRITWADN 28 (211)
T ss_dssp CSSSCEEEEEECT
T ss_pred cCCCeEEEEEeCC
Confidence 4568899999865
No 65
>1lv4_A Catestatin, chromogranin A; glycoprotein, amidation, phosphorylation, signaling protein; NMR {Synthetic} SCOP: j.95.1.1
Probab=29.62 E-value=15 Score=22.08 Aligned_cols=11 Identities=18% Similarity=0.090 Sum_probs=4.7
Q ss_pred ccccccCcccc
Q 028785 80 APVSQKDRAWR 90 (204)
Q Consensus 80 ap~SQvdR~WR 90 (204)
.|..|.-|+||
T Consensus 16 ~Pg~~~rrgw~ 26 (26)
T 1lv4_A 16 GPGPQLXXXXX 26 (26)
T ss_dssp SSCTTC-----
T ss_pred CCccccccccC
Confidence 47789999998
No 66
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=29.56 E-value=1.7e+02 Score=21.50 Aligned_cols=85 Identities=18% Similarity=0.328 Sum_probs=48.2
Q ss_pred eeeeCCceEEEEeeccccCcCCCccccceeEEEEeeccccccCccccccccCcCcCCCcceeeeccccccC-CCeEEEEe
Q 028785 44 VLKAGEDKVTITWGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDHLNKDKTCSFKIVEKPYNKS-LQTLDWII 122 (204)
Q Consensus 44 vl~aG~D~itvtw~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~l~kdK~Cq~ki~~k~y~~~-~gs~~~tl 122 (204)
+...+.++|+++|.-..... | .-..-++.|.+.. .+..|+..++++.-.. .+ +... .....+++
T Consensus 10 ~~~~~~~sv~l~W~~p~~~~-~-----~i~~Y~v~~~~~~-~~~~w~~~~~~~~~~~-~~-------~~~~~~~~~~~~i 74 (214)
T 2ibg_A 10 VTRLSDESVMLRWMVPRNDG-L-----PIVIFKVQYRMVG-KRKNWQTTNDNIPYGK-PK-------WNSELGKSFTASV 74 (214)
T ss_dssp EEEEETTEEEEEEEEECCSS-C-----CEEEEEEEEEESS-SSCCCEECSCCEECCS-SS-------CSSSSEEEEEEEE
T ss_pred eeEecCCEEEEEEECCCCCC-C-----CceEEEEEEEECC-CCCcCcccccccCccc-cc-------cccccCcceeEEe
Confidence 34457899999998764321 2 1334455555432 1345665554332211 00 1111 24566777
Q ss_pred cCCCCCceeEEEEEEEeCCCc
Q 028785 123 ESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 123 ~~dvp~atYfvraya~da~g~ 143 (204)
..=.|.-.|.+|+.+++..|.
T Consensus 75 ~~L~p~t~Y~~~V~A~n~~g~ 95 (214)
T 2ibg_A 75 TDLKPQHTYRFRILAVYSNND 95 (214)
T ss_dssp CSCCTTCEEEEEEEEEETTSC
T ss_pred cCCcCCCEEEEEEEEEecCCC
Confidence 665677789999999977664
No 67
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=29.30 E-value=55 Score=25.81 Aligned_cols=48 Identities=15% Similarity=0.201 Sum_probs=36.0
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCC------CceEeecccCCCCcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAE------RHEVAYGQSTNDQKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~------g~~vaYGqs~~~~~ttn~F~V~~itg~ 168 (204)
......++.|.|.++.-.++.+.|+| ..++.|-=.... +.|.|. -+|.
T Consensus 107 ~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~----~~F~I~-~tG~ 160 (203)
T 3ppe_A 107 KIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN----EYFTVD-DSGV 160 (203)
T ss_dssp SEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST----TTEEEC-TTSE
T ss_pred CccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC----CcEEEe-CCeE
Confidence 45678899999999999999999887 347888654422 358887 5553
No 68
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=28.80 E-value=1.6e+02 Score=21.03 Aligned_cols=24 Identities=13% Similarity=0.174 Sum_probs=19.2
Q ss_pred EEEEecCCCCCceeEEEEEEEeCC
Q 028785 118 LDWIIESDVPTATYFVRAYALNAE 141 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~ 141 (204)
-.|+|..=.|.-.|.|+++++...
T Consensus 70 t~~~l~gL~PgT~Y~~~V~A~~~~ 93 (112)
T 2cui_A 70 HSAVLRDLRSGTLYSLTLYGLRGP 93 (112)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSS
T ss_pred CEEEeCCCCCCCEEEEEEEEEECC
Confidence 367887777889999999998543
No 69
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=28.44 E-value=41 Score=29.52 Aligned_cols=51 Identities=14% Similarity=0.212 Sum_probs=38.2
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCceEeecccCCCCcccceEEEEeecc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFDIQAITG 167 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~~vaYGqs~~~~~ttn~F~V~~itg 167 (204)
......|+.|.|.++.-.++.+.|+++.++.|--.. .....+.|.|.+-+|
T Consensus 222 ~~y~~~v~En~~~gt~v~~v~A~D~dn~~i~Ysi~~-~~~~~~~F~I~~~tG 272 (419)
T 3ubh_A 222 PSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKA-QGQGAGTFNIGPTSG 272 (419)
T ss_dssp SCEEEEEETTCCTTCEEEECCEECSSCCCCEEEEEE-SSSCCSSEEECTTTC
T ss_pred CeeEEEecCCCCCCcEEEEEEEecCCCCceEEEEec-CCCCCCcEEEECCCC
Confidence 356778899999999999999999988899997532 111235698887666
No 70
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=27.97 E-value=36 Score=27.83 Aligned_cols=52 Identities=23% Similarity=0.190 Sum_probs=34.4
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCce-Ee-------ecccCCCCcccceEEEEeecc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERHE-VA-------YGQSTNDQKTTNLFDIQAITG 167 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~~-va-------YGqs~~~~~ttn~F~V~~itg 167 (204)
......|+.|.|.++...++-|.|+|... +. ||.-.-.....+.|.|.+-+|
T Consensus 6 ~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG 65 (246)
T 2x2u_A 6 DAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTG 65 (246)
T ss_dssp SEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTC
T ss_pred CceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcE
Confidence 35677899999999999999999988643 11 111110001345688887776
No 71
>2l3b_A Conserved protein found in conjugate transposon; beta, structural genomics, PSI-biology; NMR {Bacteroides thetaiotaomicron}
Probab=27.77 E-value=95 Score=24.78 Aligned_cols=58 Identities=17% Similarity=0.324 Sum_probs=42.7
Q ss_pred ccCcCcCCCcceeeeccccccC---CCeEEEEec----CCCCCceeEEEEEEEeCCCceEeecccC
Q 028785 93 EDHLNKDKTCSFKIVEKPYNKS---LQTLDWIIE----SDVPTATYFVRAYALNAERHEVAYGQST 151 (204)
Q Consensus 93 ~d~l~kdK~Cq~ki~~k~y~~~---~gs~~~tl~----~dvp~atYfvraya~da~g~~vaYGqs~ 151 (204)
+|+|.=-..-.|.+.+.|.... ++.+++++. -|-..+.|+||-+..|+.|. +.+-+-+
T Consensus 2 dd~LDVQQ~YpF~v~tmPV~k~I~~GeTvEIR~~L~reG~f~~t~Y~IRYFQ~dGkG~-L~~~dg~ 66 (130)
T 2l3b_A 2 NDDVDIQQSYPFSIETMPVPKKLKVGETAEIRCQLHRDGRFEETKYFIRYFQPDGAGT-LKMSDGT 66 (130)
T ss_dssp CTTCCCCCCCCCEEEECCCCSSCCTTCEEEEEEEEECSSCCSSCCCEEEEECSSCCCE-EEETTSC
T ss_pred CcccceeecCCceEEEeccccccCCCCeEEEEEEEecCceecccEEEEEEEeecCCee-EEeCCCC
Confidence 3555555566788888777533 577887776 67889999999999999996 6665444
No 72
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=27.74 E-value=67 Score=23.52 Aligned_cols=26 Identities=15% Similarity=0.184 Sum_probs=22.5
Q ss_pred EEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 118 LDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 118 ~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
..++|..=.|.-+|.+|+.+.++.|.
T Consensus 75 t~~~v~gL~p~t~Y~frV~A~n~~G~ 100 (120)
T 1wfu_A 75 TRHVVEGLEPRTLYKFRLKVTSPSGE 100 (120)
T ss_dssp SEEEEESCCTTCEEEEEEEEECSSSC
T ss_pred cEEEECCCCCCCEEEEEEEEECCCCC
Confidence 45899988899999999999987774
No 73
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=27.73 E-value=1.4e+02 Score=19.98 Aligned_cols=27 Identities=19% Similarity=0.119 Sum_probs=21.1
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g 142 (204)
....++|..=.|.-.|.+|+.+.+..|
T Consensus 76 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G 102 (122)
T 1va9_A 76 DSEVYTLDNLKKFAQYGVVVQAFNRAG 102 (122)
T ss_dssp SEEEEEEESCCSSCCEEEEEEEEETTE
T ss_pred ceeEEEeCCCCCCCEEEEEEEEEcCCC
Confidence 356677775558889999999998776
No 74
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=27.57 E-value=74 Score=21.33 Aligned_cols=27 Identities=19% Similarity=0.309 Sum_probs=21.3
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
...++|..=.|...|++|+.+.+..|.
T Consensus 63 ~~~~~v~~L~p~t~Y~frV~A~n~~G~ 89 (109)
T 1x5x_A 63 DLAYTVKNLRRSTKYKFKVIAYNSEGK 89 (109)
T ss_dssp CSEEEEESCCSSCEEEEEEEEECSSCE
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCCC
Confidence 345777666688999999999988774
No 75
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=26.16 E-value=64 Score=25.64 Aligned_cols=23 Identities=9% Similarity=0.221 Sum_probs=19.6
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
++.|+. +.++|.+++.+.|+.|.
T Consensus 145 ~~~~~~----~~G~~tl~a~A~D~aGn 167 (190)
T 3pdd_A 145 EYEWKA----VEGNHEISVIAYDDDDA 167 (190)
T ss_dssp EEEEEC----CSEEEEEEEEEEETTCC
T ss_pred EEEEec----CCeeEEEEEEEEECCCC
Confidence 456665 89999999999999996
No 76
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=25.31 E-value=70 Score=21.86 Aligned_cols=26 Identities=19% Similarity=0.336 Sum_probs=20.5
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...+++..=.|..+|.+|+.+.+..|
T Consensus 74 ~~~~~v~~L~p~t~Y~frV~A~n~~G 99 (120)
T 2crm_A 74 TREHLCDRLNPGCFYRLRVYCISDGG 99 (120)
T ss_dssp CSEEEECSCCTTSCEEEEEEEEETTE
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCc
Confidence 34567766668889999999998776
No 77
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=24.99 E-value=51 Score=30.14 Aligned_cols=52 Identities=21% Similarity=0.330 Sum_probs=37.5
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCC-----ceEeecccCC--CCcccceEEEEeecc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAER-----HEVAYGQSTN--DQKTTNLFDIQAITG 167 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g-----~~vaYGqs~~--~~~ttn~F~V~~itg 167 (204)
......|+.|.|.++..+++-+.|+|. .++.|-=... .....++|.|.+.+|
T Consensus 111 ~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG 169 (559)
T 3q2w_A 111 QVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETG 169 (559)
T ss_dssp SEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTC
T ss_pred CeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCce
Confidence 456778999999999999999998873 4578854321 111236799988777
No 78
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=23.54 E-value=2.8e+02 Score=22.06 Aligned_cols=27 Identities=26% Similarity=-0.002 Sum_probs=19.5
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
...++|..=.|...|.+|+.+.+..|.
T Consensus 348 ~~~~~i~~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 348 KDHIILEHLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEC-CCB
T ss_pred cceEEeCCcCCCCEEEEEEEEEcCCcC
Confidence 345677655677899999999977763
No 79
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=23.29 E-value=55 Score=29.90 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=38.4
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCC------ceEeecccCCC--CcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAER------HEVAYGQSTND--QKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g------~~vaYGqs~~~--~~ttn~F~V~~itg~ 168 (204)
......|+.|.|.++...++-+.|+|. ..+.|--.... ....++|.|.+.+|.
T Consensus 117 ~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~ 177 (546)
T 1l3w_A 117 DVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGV 177 (546)
T ss_dssp SCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCE
T ss_pred ceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCce
Confidence 356778999999999999999998874 36888644311 113467999887763
No 80
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.15 E-value=1.7e+02 Score=19.54 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=18.5
Q ss_pred EEEecCCCCCceeEEEEEEEeCCC
Q 028785 119 DWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 119 ~~tl~~dvp~atYfvraya~da~g 142 (204)
.++|..=.|.-.|.+|+.+.+..|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G 88 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAG 88 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSC
T ss_pred EEEECCCCCCCeEEEEEEEEeCCc
Confidence 566665557778999999998777
No 81
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.12 E-value=1.7e+02 Score=19.47 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=20.2
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|..+|.+|+.+++..|
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 98 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYNEWG 98 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEESSC
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCc
Confidence 45667765567788999999998776
No 82
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=22.42 E-value=82 Score=24.68 Aligned_cols=25 Identities=8% Similarity=0.222 Sum_probs=21.5
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAE 141 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~ 141 (204)
.+.++++.+..+|.|+|.+...+.+
T Consensus 125 ~v~f~f~l~L~~G~Y~lsv~i~~~~ 149 (188)
T 2r5o_A 125 VFKFSLPVDLNSGDYLLSFGISAGN 149 (188)
T ss_dssp EEEEEEECCBCSEEEEEEEEEEEEE
T ss_pred EEEEEEecccCCCeEEEEEEEecCC
Confidence 6778888999999999999987644
No 83
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=21.70 E-value=4e+02 Score=23.73 Aligned_cols=76 Identities=13% Similarity=0.255 Sum_probs=43.8
Q ss_pred EecCCCceeeeCCceEEEE---eeccccCcCCCccccceeEEEEeeccccccCccccccccC---cCcCC-C--cceeee
Q 028785 37 TTTKRGQVLKAGEDKVTIT---WGLNQSLAAGTDSAYKTMKLQLCFAPVSQKDRAWRKTEDH---LNKDK-T--CSFKIV 107 (204)
Q Consensus 37 as~~~g~vl~aG~D~itvt---w~ln~t~~ag~d~~~ktvkvkLCYap~SQvdR~WRK~~d~---l~kdK-~--Cq~ki~ 107 (204)
.+|.+|+++.+| .++|. |+..-. .=..|.|.+. -.+-|+..+=. +.+++ - |+|
T Consensus 258 ~~P~~~~~v~~g--~~~v~G~A~sGgg~-------~I~rVEVS~D------gG~tW~~A~l~~~~~~~~~~~~W~~W--- 319 (372)
T 2a9d_A 258 TQPRPGAAVPPG--ELTVKGYAWSGGGR-------EVVRVDVSLD------GGRTWKVARLMGDKAPPGRAWAWALW--- 319 (372)
T ss_dssp EESCTTCEECSE--EEEEEEEEECSTTC-------CEEEEEEESB------SSSSCEECEECSCCCCTTCCCSCEEE---
T ss_pred ecCCCCCEeccc--eEEEEEEEEcCCCC-------CEEEEEEEcC------CCCcceEeEcCCcccccCCccEEEEE---
Confidence 578999999887 45554 654311 1146666654 35678876532 11110 1 222
Q ss_pred ccccccCCCeEEEEecCCCCCc-eeEEEEEEEeCCCc
Q 028785 108 EKPYNKSLQTLDWIIESDVPTA-TYFVRAYALNAERH 143 (204)
Q Consensus 108 ~k~y~~~~gs~~~tl~~dvp~a-tYfvraya~da~g~ 143 (204)
+++|.+ +++ .|.|.+=+.|.+|.
T Consensus 320 ---------~~~~~~----~~g~~~~i~~RA~D~~g~ 343 (372)
T 2a9d_A 320 ---------ELTVPV----EAGTELEIVCKAVDSSYN 343 (372)
T ss_dssp ---------EEEEEE----CTTCEEEEEEEEEETTCC
T ss_pred ---------EEeEEc----CCCCEEEEEEEEEcCCCC
Confidence 233333 344 89999999999995
No 84
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=21.58 E-value=1.2e+02 Score=23.10 Aligned_cols=43 Identities=14% Similarity=0.129 Sum_probs=19.5
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCceEeecccCCCCcccceEEE
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERHEVAYGQSTNDQKTTNLFDI 162 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~~vaYGqs~~~~~ttn~F~V 162 (204)
|.+++.+.... ..-+-..+| ++++.+|+||+.. .+..++.|.+
T Consensus 49 g~v~I~l~~~~-~~~~~w~ly--~~~~nyv~y~~~~-gn~~~~~~~~ 91 (121)
T 3jqw_A 49 GEVKIDINKLG-YGGATWVVY--DENNNAVSYATDD-GQNLSGKFKA 91 (121)
T ss_dssp EEEEEEEEECS-SSEEEEEEE--CTTSCEEEECEEC-SSEEEEEEEE
T ss_pred CeEEEEEEecC-CCcEEEEEE--eCCCCeEEEeccC-CCEEEEEEEe
Confidence 45555554321 222333333 4446666666632 3444444544
No 85
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=21.43 E-value=1.6e+02 Score=19.90 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=21.6
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCCc
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAERH 143 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g~ 143 (204)
...++|..=.|.-.|.|++.+++.+|.
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~~~~~ 85 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWGEDSA 85 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEEECTT
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcc
Confidence 346778766789999999999977764
No 86
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=21.23 E-value=62 Score=31.73 Aligned_cols=53 Identities=21% Similarity=0.291 Sum_probs=38.5
Q ss_pred CeEEEEecCCCCCceeEEEEEEEeCCCc------eEeecccCCC--CcccceEEEEeeccc
Q 028785 116 QTLDWIIESDVPTATYFVRAYALNAERH------EVAYGQSTND--QKTTNLFDIQAITGR 168 (204)
Q Consensus 116 gs~~~tl~~dvp~atYfvraya~da~g~------~vaYGqs~~~--~~ttn~F~V~~itg~ 168 (204)
......|+.|.|.++...++-+.|+|.. .+.|--.... ....++|.|.+.+|.
T Consensus 266 ~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~ 326 (880)
T 1q55_A 266 DVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGV 326 (880)
T ss_dssp SCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCE
T ss_pred CcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCcc
Confidence 3567788999999999999999988753 6888643311 113467999887764
No 87
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=20.58 E-value=1.4e+02 Score=20.02 Aligned_cols=26 Identities=27% Similarity=0.298 Sum_probs=19.8
Q ss_pred eEEEEecCCCCCceeEEEEEEEeCCC
Q 028785 117 TLDWIIESDVPTATYFVRAYALNAER 142 (204)
Q Consensus 117 s~~~tl~~dvp~atYfvraya~da~g 142 (204)
...++|..=.|...|.+|+.+.+..|
T Consensus 64 ~~~~~v~~L~p~t~Y~frV~A~n~~G 89 (110)
T 2crz_A 64 EVECTVSSLLPGKTYSFRLRAANKMG 89 (110)
T ss_dssp CSEEEEESCCTTCEEEECCEEECSSC
T ss_pred cEEEEECCcCCCCEEEEEEEEEcCCc
Confidence 34566665567888999999998777
Done!