BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028791
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 63 QDSPCSRCEIPLTELREPLATCISDLDENALRARQRLEQKLASLHPRSRPGEVPQNKSSG 122
Q++P + P+ E EP+A SD N + R E + SR G + S
Sbjct: 606 QNNPSAEVRAPIAEPAEPVAPVESDEGSNVATSATRREGR------NSRGGVTLEESGSL 659
Query: 123 -----------NEGMKDTRLGSKLLWGSHLRHLKLR--GSKSNTKICSVCLEEFQEEQPV 169
NE D G L + +L R G K CSVC+ E+ E +
Sbjct: 660 PFLSLAQFFLLNEDDDDQPRG---LTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKL 716
Query: 170 TRLPCSHKYHSDCVLPWLAAHPQCPYCRRPALV 202
+LPCSH+YH C+ WL+ + CP CRR LV
Sbjct: 717 RKLPCSHEYHIHCIDRWLSENSTCPICRRAVLV 749
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 150 KSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
KS C+VC++EF++ V ++PC H +H DC+LPWL H CP CR
Sbjct: 210 KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 136 LWGSHLRHLKLR--GSKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQC 193
L + +L +R G K CSVC+ E+ E + +LPCSH+YH C+ WL+ + C
Sbjct: 548 LTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTC 607
Query: 194 PYCRRPALV 202
P CRR L
Sbjct: 608 PICRRAVLA 616
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 136 LWGSHLRHLKLR--GSKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQC 193
L + +L R G K CSVC+ E+ E + +LPCSH+YH C+ WL+ + C
Sbjct: 546 LTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTC 605
Query: 194 PYCRRPALV 202
P CRR LV
Sbjct: 606 PICRRAVLV 614
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 123 NEGMKDTRLGSKLLWGSHLRHLKLR--GSKSNTKICSVCLEEFQEEQPVTRLPCSHKYHS 180
NE +D G L + +L +R G K CSVC+ E+ E + +LPCSH+YH
Sbjct: 514 NEDDEDQPRG---LTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHV 570
Query: 181 DCVLPWLAAHPQCPYCRRPAL 201
C+ WL+ + CP CRR L
Sbjct: 571 HCIDRWLSENSTCPICRRAVL 591
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 136 LWGSHLRHLKLR--GSKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQC 193
L + +L R G K CSVC+ E+ E + +LPCSH+YH C+ WL+ + C
Sbjct: 563 LTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTC 622
Query: 194 PYCRRPALV 202
P CRR LV
Sbjct: 623 PICRRAVLV 631
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C+VC+++F+E ++PC H YH DC+LPWL H CP CR
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCR 265
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 156 CSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRRPALV 202
CSVCL EF+E++ + LP CSH +H +C+ WL +H CP CR P L+
Sbjct: 135 CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLL 182
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 84 CISDLDENALRARQRLEQKLASLHPRSRPGEVPQNKSSGNEGMKDTRLGSKLLWGSHLRH 143
C +D A R + L P + P S G+ DT L K+ + +H
Sbjct: 86 CANDTTNEAASESGRSDIILDVNSPERGDQDDPFALESSTAGLDDT-LIKKIGFFKLKKH 144
Query: 144 LKLRGSKSNTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRRPALV 202
G K N CS+CL EF E++ + LP C+H +H C+ WL +H CP CR +V
Sbjct: 145 QN--GFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIV 202
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 146 LRGSKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
+ +K++ K C VCL EF+ E+ V +PC H +HS+C+LPWL+ CP CR
Sbjct: 79 ISSAKADLK-CPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCR 129
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRR 198
C VC E++ + V +LPC+H +H+DC++PWL H CP CR+
Sbjct: 228 CPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRK 270
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 152 NTKI-CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRR 198
NT + C VC E++ E+ V +LPC+H +HS C++PWL H CP CR+
Sbjct: 224 NTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRK 271
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRR 198
C VC E++ + V +LPC+H +H+DC++PWL H CP CR+
Sbjct: 227 CPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRK 269
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRR 198
C VC E++ E+ V +LPC+H +HS C++PWL H CP CR+
Sbjct: 228 CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRK 270
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRR 198
C VC E++ + V +LPC+H +H+DC++PWL H CP CR+
Sbjct: 228 CPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRK 270
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C VCL EF+E + V +LPC H +HS C+LPWL CP CR
Sbjct: 79 CPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCR 120
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C VCL EF+E + V +LPC H +HS C+LPWL CP CR
Sbjct: 79 CPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCR 120
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 147 RGSKSNTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRRPAL 201
+ S +N + C+VCL EF+E V LP C H +H +C+ WL +HP CP CR L
Sbjct: 147 KTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAIL 202
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 154 KICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRRPALVW 203
K+CSVC+ ++ + +LPC H++H C+ WL+ + CP CRRP L +
Sbjct: 612 KVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLEF 661
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 147 RGSKSNTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRRPALV 202
R S N+ C+VCL +F+ E + LP C H +H+DC+ WL ++ CP CR P
Sbjct: 108 RSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFA 164
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 152 NTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRRPAL 201
T+ C+VCL+ F +Q + LPC H++H DCV PWL CP C+ L
Sbjct: 323 GTETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 372
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C VCL EF+E++ V +PC H +H+ C+LPWL CP CR
Sbjct: 79 CPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCR 120
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 145 KLRGSKSNTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRRPAL 201
L+ S T CS+CL ++++ + LP C+H +H +CV PWL HP CP CR L
Sbjct: 118 SLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPL 175
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 149 SKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYC 196
S S+T +C++CLEEF E Q + + C H++H CV PWL H CP C
Sbjct: 265 SCSSTPVCAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLC 312
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 152 NTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCR 197
N++ CSVCL EFQE++ + +P C H +H DC+ WL + CP CR
Sbjct: 130 NSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCR 176
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 154 KICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRRPAL 201
KICSVC+ ++ + +LPC H++H C+ WL+ + CP CR+P L
Sbjct: 630 KICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 156 CSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCR 197
CSVCL EFQ+E+ + +P CSH +H DC+ WL + CP CR
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 149 SKSNTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRR 198
+ NT CSVCL++FQ + V LP C H +H C+ WL H CP CRR
Sbjct: 189 ASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRR 239
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C+VC+E +++ V LPC H +H CV PWL+ H CP C+
Sbjct: 264 CAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C+VC+E +++ V LPC H +H CV PWL+ H CP C+
Sbjct: 264 CAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 149 SKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
S +T C++CLE++ + + + +PC+H++H CV PWL H CP+CR
Sbjct: 283 SSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 331
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C+VC+E +++ V LPC H +H CV PWL+ H CP C+
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 156 CSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCR 197
CSVCL EFQE + + LP C+H +H C+ WL +H CP CR
Sbjct: 159 CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 156 CSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCR 197
C+VCL EF+ E + LP CSH +H DC+ WL +H CP CR
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 152 NTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRRPAL 201
+ C+VCL+ F +Q + LPC H++H DCV PWL CP C+ L
Sbjct: 321 GAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVL 370
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 117 QNKSSGNEGMKDTRLGSKLLWGSHLRHLKLRGSKSNTKICSVCLEEFQEEQPVTRLP-CS 175
Q S+ +G+ ++ + S ++ + GS CSVCL EF+E + + LP C+
Sbjct: 108 QRISTNGDGLNESMIKSITVYKYKSGDGFVDGSD-----CSVCLSEFEENESLRLLPKCN 162
Query: 176 HKYHSDCVLPWLAAHPQCPYCR 197
H +H C+ WL +H CP CR
Sbjct: 163 HAFHLPCIDTWLKSHSNCPLCR 184
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 148 GSKSNTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCR 197
+KS C+VCL EF + + LP C H +H DC+ PWLAA CP CR
Sbjct: 125 AAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCR 175
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 154 KICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLA-AHPQCPYCRRPA 200
+C++CL+E+++ + LPC+H YHS CV PWL CP C++P
Sbjct: 228 DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRRPAL 201
C++C+E ++ + LPC H++H +C+ PWL H CP C+ L
Sbjct: 303 CAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVL 348
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 151 SNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYC 196
S+ +C++CLEEF E Q + + C H++H +CV PWL H CP C
Sbjct: 267 SSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLC 312
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCRR 198
C VC E++ + V +LPC+H +H C++PWL H CP CR+
Sbjct: 231 CPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRK 273
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 156 CSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCR 197
C VCL EF+E++ + LP C+H +H C+ WL++H CP CR
Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 154 KICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLA-AHPQCPYCRRPA 200
+C++CL+E+++ + LPC+H YHS CV PWL CP C++P
Sbjct: 228 DVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 109 RSRPGEVPQNKSSGNEGMKDTRLGSKLLWGSHLRHL-KLRGSKSNTKI--CSVCLEEFQE 165
+S+ G V +++ + + DT + SK L G L + K+R + ++ +I CSVCL++FQ
Sbjct: 128 QSQMGAV-ESQFQDHTDIFDTAI-SKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQV 185
Query: 166 EQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRR 198
+ V LP C H +H C+ WL H CP CRR
Sbjct: 186 GETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRR 219
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 156 CSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCR 197
C++CL EF++E+P+ +P CSH +H++C+ WL++ CP CR
Sbjct: 120 CAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCR 162
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 154 KICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLA-AHPQCPYCRRPA 200
+C++CL+E+++ + LPC+H YHS CV PWL CP C++P
Sbjct: 228 DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 147 RGSKSNTKICSVCLEEFQEEQPVTRLP-CSHKYHSDCVLPWLAAHPQCPYCRRPALV 202
+ +K + C +CL +F+E + V +P C H +H DCV WL+++ CP CR L
Sbjct: 131 KAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLF 187
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 134 KLLWGSHLRHLKLRGSKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQ- 192
+L+ S + ++R +C++CL+E++E + LPCSH YH C+ PW + P+
Sbjct: 287 RLVKTSTCQKAQVRTFTRRNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRR 346
Query: 193 -CPYCRR 198
CP C++
Sbjct: 347 SCPVCKQ 353
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 147 RGSKSNTKICSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
+G + + C+VC+E F+ + + LPC H +H C+ PWL H CP C+
Sbjct: 260 KGIDVDAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCK 310
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 156 CSVCLEEFQEEQPVTRLPCSHKYHSDCVLPWLAAHPQCPYCR 197
C++CLE++ + + + +PC+H++H CV PWL H CP+CR
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCR 308
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,417,038
Number of Sequences: 539616
Number of extensions: 3106331
Number of successful extensions: 8313
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 7888
Number of HSP's gapped (non-prelim): 515
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)