BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028792
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/203 (91%), Positives = 197/203 (97%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLTANKVV+ ETAKAFADE+GIPFMETSAK+ATNV+QAFMAMAASIK+RMASQPA+
Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAA 180
Query: 181 NARPPTVQIRGQPVNQKSGCCST 203
NARP TVQIRGQPVNQK+ CCS+
Sbjct: 181 NARPATVQIRGQPVNQKTSCCSS 203
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/203 (90%), Positives = 194/203 (95%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRF+DDSY+ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT N+ + YETAKAFADEIGIPFMETSAK ATNVEQAFMAM+ASIK RMASQPA N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180
Query: 181 NARPPTVQIRGQPVNQKSGCCST 203
NARPPTVQIRGQPV QK+GCCST
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/203 (89%), Positives = 193/203 (95%), Gaps = 1/203 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVE+AFMAM A+IK RMASQPA
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPA-G 179
Query: 181 NARPPTVQIRGQPVNQKSGCCST 203
++PPTVQIRGQPVNQ+SGCCS+
Sbjct: 180 GSKPPTVQIRGQPVNQQSGCCSS 202
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/202 (89%), Positives = 188/202 (93%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDL N+VVSYE KA ADEIGIPF+ETSAK ATNVE+AFM MA IKNRMASQPA+N
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180
Query: 181 NARPPTVQIRGQPVNQKSGCCS 202
++P TVQ+RGQPV Q+S CCS
Sbjct: 181 ASKPATVQMRGQPVAQQSSCCS 202
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/203 (89%), Positives = 192/203 (94%), Gaps = 1/203 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVE+AFMAM A+IK RMASQPA
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG- 179
Query: 181 NARPPTVQIRGQPVNQKSGCCST 203
A+PPTVQIRGQPVNQ+SGCCS+
Sbjct: 180 GAKPPTVQIRGQPVNQQSGCCSS 202
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 352 bits (902), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/202 (84%), Positives = 179/202 (88%), Gaps = 1/202 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVE DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT+ KVV Y AKAFADEIGIPF+ETSAK+ATNVEQAFM MAA IKNRMASQP
Sbjct: 121 NKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPT 180
Query: 181 NARPPTVQIR-GQPVNQKSGCC 201
A P V+ + G+P+N KS C
Sbjct: 181 KAGGPVVRPQEGKPINSKSSSC 202
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 340 bits (871), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 162/201 (80%), Positives = 171/201 (85%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 340 bits (871), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 162/201 (80%), Positives = 171/201 (85%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 340 bits (871), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 162/201 (80%), Positives = 171/201 (85%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 340 bits (871), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 162/201 (80%), Positives = 171/201 (85%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 338 bits (866), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/206 (82%), Positives = 175/206 (84%), Gaps = 9/206 (4%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVE DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQ---- 176
NK DLT KVV Y+ AKAFADEIGIPF+ETSAK+ATNVEQAFM MAA IKNRMASQ
Sbjct: 121 NKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPP 180
Query: 177 -PASNNARPPTVQIRGQPVNQKSGCC 201
P RP G+P+N KS C
Sbjct: 181 KPGGPVVRPT----EGKPINNKSSSC 202
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 337 bits (864), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 162/201 (80%), Positives = 169/201 (84%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM S
Sbjct: 121 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
+ V I+ PV G C
Sbjct: 181 GSEKSNVNIQSTPVKSSGGGC 201
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 337 bits (864), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 161/201 (80%), Positives = 170/201 (84%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQ SFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 333 bits (854), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 160/202 (79%), Positives = 175/202 (86%), Gaps = 1/202 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN +YDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV + TAK +AD++GIPF+ETSAK+ATNVEQAFM MAA IKNRM A++
Sbjct: 124 NKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAAS 183
Query: 181 NARPPTVQIRGQPVN-QKSGCC 201
+++P PV+ K GCC
Sbjct: 184 DSKPSVKINSSTPVSANKGGCC 205
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 328 bits (842), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/201 (80%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV Q G C
Sbjct: 181 GER-PNLKIDSTPVKQAGGGC 200
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 327 bits (837), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +G+PF+ETSAK+ATNVEQAFM MAA IK RM AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV SG C
Sbjct: 181 GER-PNLKIDSTPVKPASGGC 200
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 327 bits (837), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 159/201 (79%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRT+TSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +G+PF+ETSAK+ATNVEQAFM MAA IK RM AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV SG C
Sbjct: 181 GER-PNLKIDSTPVKSASGGC 200
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 326 bits (835), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 326 bits (835), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 325 bits (833), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQER RTITSSYYRGAHGIIVVYDVTDQES+ NVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV Q G C
Sbjct: 181 GER-PNLKIDSTPVKQAGGGC 200
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 324 bits (830), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/201 (79%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ES+ NVKQWL EIDRYASENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 321 bits (822), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 150/202 (74%), Positives = 176/202 (87%), Gaps = 1/202 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M+NEYDYLFKLLLIGDS VGKSCLLLRFADD+Y++SYISTIGVDFKIRT+EQDGKTIKLQ
Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYD T+ ESFNNVKQWL+EIDRYA+E+V KLL+G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK D+ +KVVS ET +A ADE+GIPF+ETSAK + NVEQAF+ +A IK +M SQ +N
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180
Query: 181 -NARPPTVQIRGQPVNQKSGCC 201
+ P TVQ++GQP+ Q +G C
Sbjct: 181 KTSGPGTVQMKGQPIQQNNGGC 202
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 320 bits (820), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/201 (77%), Positives = 169/201 (84%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL+EIDRYA ENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLTA +VVS + AK FA+ +GI F+ETSAK+A NVE+AFM MAA IK RMA+ P +
Sbjct: 121 NKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAP 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
A + P N S CC
Sbjct: 181 KAGVKLTPGQQVPSNGGSKCC 201
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 317 bits (811), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/203 (75%), Positives = 166/203 (81%), Gaps = 2/203 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGI VVYDVTD +SFNNVKQWL EIDRYA+E VNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK D+T KVV Y AK FAD +GIPF+ETSAK+A+NVEQAF+ MA IK RM S A+N
Sbjct: 121 NKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATN 180
Query: 181 NARPPTVQIRGQPV--NQKSGCC 201
N + G V N GCC
Sbjct: 181 NTKASVNVSPGHGVSNNSSGGCC 203
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 314 bits (804), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 168/202 (83%), Gaps = 1/202 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN +Y YLFKLLLIGDSGVGKSCLLLRFADD+Y ES+ISTIGVDFKIRT+E +GKTIKLQ
Sbjct: 1 MNPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ +F NV+QWL EIDR+A ENVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM-ASQPAS 179
NK DL A KVV + TAKAFAD + IPF+ETSAK +TNVEQAFM MA IKNR+ ASQP
Sbjct: 121 NKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQ 180
Query: 180 NNARPPTVQIRGQPVNQKSGCC 201
+ V P++ KSGCC
Sbjct: 181 TVDKNKVVPGSSAPISPKSGCC 202
>sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2
Length = 208
Score = 312 bits (799), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 175/208 (84%), Gaps = 5/208 (2%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M+NE+DYLFKLLLIGDS VGKSC LLRFADDSY++SYISTIGVDFKIRTVE +GKT+KLQ
Sbjct: 1 MSNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYD+TD ESFNNVKQWL+EIDRYA+++V KLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDL N+ V A+A+A E+GIPF+ETSAK + NVE+AF+AM+A+IK A A+
Sbjct: 121 NKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAAL 180
Query: 181 NARPP-TVQIRGQPVNQK----SGCCST 203
+P VQ++G+P+ Q+ S CCST
Sbjct: 181 ERKPSNVVQMKGRPIQQEQQKSSRCCST 208
>sp|Q92928|RAB1C_HUMAN Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5
SV=2
Length = 201
Score = 306 bits (784), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/201 (75%), Positives = 163/201 (81%), Gaps = 1/201 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN YD LFKLLLIGDSGVGKSCLLLRFADD Y ESYISTIGVDFKI+T+E DGKTIKLQ
Sbjct: 1 MNPGYDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERF TITSSYYRGAHG +VVYDVTDQES+ NVKQWL EIDR+ASENVNKLLVG
Sbjct: 61 IWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DLT KVV TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK +M AS
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASG 180
Query: 181 NARPPTVQIRGQPVNQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 305 bits (782), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 166/203 (81%), Gaps = 2/203 (0%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT E +GKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQ+SFNNVKQWL EIDRYA E VN+LLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQP-AS 179
NK D+ KVV Y AK FAD + IPF+ETSAK +TNVEQAF+ M+ IK RM + AS
Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180
Query: 180 NNARPPTVQIRGQPVNQKSG-CC 201
+NA+ +G V+Q S CC
Sbjct: 181 SNAKSSVKVGQGTNVSQSSSNCC 203
>sp|P34140|RAB1B_DICDI Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B
PE=2 SV=2
Length = 206
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 160/203 (78%), Gaps = 3/203 (1%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+ DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTD SFNNVKQW+ EI RYA ++V +LLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDL K+V TA+ +AD +GIPF+ETSAKS+ NVEQAFM MA+ IK +N
Sbjct: 121 NKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNN 180
Query: 181 NA--RPPTVQIRG-QPVNQKSGC 200
N+ V+ G P+ +K C
Sbjct: 181 NSTYNAHVVKPTGFTPIGKKKKC 203
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 288 bits (737), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 160/206 (77%), Gaps = 5/206 (2%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN+EYDYLFKLLLIG+SGVGKSCLLLRF+DD+Y YISTIGVDFKI+TVE DGKT+KLQ
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRG+HGII+VYDVTDQESFN VK WL EIDRYA+ V KLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCDL +VV Y+ AK FAD +PF+ETSA +TNVE AF+ MA IK M+ Q +
Sbjct: 121 NKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNE 180
Query: 181 NARPP----TVQIRGQPV-NQKSGCC 201
+ V ++GQ + N GCC
Sbjct: 181 TTQKKEDKGNVNLKGQSLTNTGGGCC 206
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 277 bits (708), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M E+D+ FK+LLIGDSGVGKSCLLLRFADDS+ +++ISTIGVDFKI+T+ DGKTIKLQ
Sbjct: 3 MAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQ 62
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTITSSYYRGA GII+VYD TDQ+SF NVKQW+ EIDRYA ENVNKLLVG
Sbjct: 63 IWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVG 122
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NK DL KVV AK+FA+ GIPF+ETSAK+ATNVE+ F++MA IKNR+A
Sbjct: 123 NKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD--IQE 180
Query: 181 NARPPTVQIRGQPVNQKSG 199
+P V I+ + + G
Sbjct: 181 TPKPDEVDIKSKNKTKSGG 199
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 156/200 (78%), Gaps = 6/200 (3%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E +GK IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
AGQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+ I+++A+++VNK+L+GNKCD
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCD 131
Query: 125 LTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARP 184
+ KVV K+ ADE GI F+ETSAK++ NVE+AF+++A IK RM P N +P
Sbjct: 132 MAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP---NEQP 188
Query: 185 PTVQI---RGQPVNQKSGCC 201
VQ G N+K CC
Sbjct: 189 QVVQPGTNLGANNNKKKACC 208
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 153/197 (77%), Gaps = 5/197 (2%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YD+L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E +GK IKLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
AGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+ I+++AS++VNK+L+GNKCD
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCD 131
Query: 125 LTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARP 184
+T KVV K+ ADE GI F+ETSAK++ NVE+AF+ +A IK RM P
Sbjct: 132 MTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTPND----- 186
Query: 185 PTVQIRGQPVNQKSGCC 201
P I P N+K+ CC
Sbjct: 187 PDHTICITPNNKKNTCC 203
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 251 bits (640), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 182
D+ +K V +A ADE GI F ETSAK+ NVE+ F ++A IK R+A A
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEA 190
Query: 183 RPP-TVQIRGQPVNQ---KSGCCST 203
+P T++ Q NQ KS CC +
Sbjct: 191 QPSITIKPADQSGNQAAAKSACCGS 215
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 154/209 (73%), Gaps = 12/209 (5%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 182
D+ +K V +A ADE GI F ETSAK+ NVE+ F ++ IK R++ + A
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLS--DTDSRA 188
Query: 183 RPPTVQIR--------GQPVNQKSGCCST 203
P T++I GQ QKS CC T
Sbjct: 189 EPATIKISQTDQAAGAGQAT-QKSACCGT 216
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 153/208 (73%), Gaps = 10/208 (4%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS++VNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 182
D+ +K V +A ADE G+ F ETSAK+ NVE+ F ++A IK R+A A A
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDA--RA 188
Query: 183 RPPTVQIR-------GQPVNQKSGCCST 203
P T++I QKS CC T
Sbjct: 189 EPQTIKINQSDQGAGTSQATQKSACCGT 216
>sp|O76173|RAB1C_DICDI Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C
PE=2 SV=1
Length = 201
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 143/167 (85%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
EYD L K+L+IGDSGVGKSC+LLRFAD+ + +SYISTIGVDF IRT+E DGK IKLQIWD
Sbjct: 29 EYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWD 88
Query: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
TAGQERF+TIT+SYYRGAHG+I+VYD+T +SFN++K+WL ++DR+AS +V KL+VGNKC
Sbjct: 89 TAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKC 148
Query: 124 DLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 170
DL + + V ++ AK FADE+ IP METSAK +T +++AF+ +A+ IK
Sbjct: 149 DLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 145/180 (80%), Gaps = 2/180 (1%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E DGK IKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
AGQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++ASENV K+L+GNKCD
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 125 LTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM--ASQPASNNA 182
+ VS+E +A ADE+G+ F+E SAK+ NV++AF +A IK + A SN A
Sbjct: 126 CEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQA 185
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 156/209 (74%), Gaps = 11/209 (5%)
Query: 3 NEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIW 62
++YDYL KLLLIGDSGVGKSCLLLRF+DD++ S+I+TIG+DFKIRTVE DGK IKLQIW
Sbjct: 10 SDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIW 69
Query: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK 122
DTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS++VNK+LVGNK
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNK 129
Query: 123 CDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNN 181
D+ +K V +A ADE GI F ETSAK+ NVEQ F+++A IK R+ +
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLT--ESDTK 187
Query: 182 ARPPTVQIRGQ--------PVNQKSGCCS 202
A P ++I Q N+KS CCS
Sbjct: 188 AEPQGIKITKQDANKASSSSTNEKSACCS 216
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 240 bits (612), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 146/200 (73%), Gaps = 1/200 (0%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YD L KLLL+GDSGVGKSCLLLRF DD + S+I+TIG+DFKI+ V+ DGK +KLQIWD
Sbjct: 9 DYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWD 68
Query: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
TAGQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+ I+++AS+NVNK+LVGNK
Sbjct: 69 TAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKL 128
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 182
DL +K VVS +A ADE G F ETSAK +VE+AF+A+A + RM + A+
Sbjct: 129 DLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQL 188
Query: 183 RPPTVQIRGQPVNQKSGCCS 202
QPV SG S
Sbjct: 189 LQQQQLSAAQPVRLTSGSPS 208
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 153/207 (73%), Gaps = 9/207 (4%)
Query: 3 NEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIW 62
++YDYL KLLLIGDSGVGKSCLLLRF+DD++ S+I+TIG+DFKIRTVE DGK IKLQIW
Sbjct: 10 SDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIW 69
Query: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK 122
DTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNK 129
Query: 123 CDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNN 181
D+ +K V +A ADE GI F ETSAK+ NVE FM++A IK R+
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLT--ETDTK 187
Query: 182 ARPPTVQIRGQ------PVNQKSGCCS 202
A P ++I Q +KS CCS
Sbjct: 188 AEPQGIKITKQDTAASSSTAEKSACCS 214
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 144/190 (75%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DF+IRTV+ +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+G
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCD+ A + V E A A E GI F ETSAKS+ NV++AF ++A I + + N
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKN 180
Query: 181 NARPPTVQIR 190
N +PP+ ++
Sbjct: 181 NNKPPSTDLK 190
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK---NRMASQP 177
NKCD+ + VS E + A + GI F+ETSAKS+TNVE+AF +A I NR +
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDS 180
Query: 178 ASNNARPP 185
S+ A P
Sbjct: 181 NSSGAGGP 188
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK---NRMASQP 177
NKCD+ + VS E + A + GI F+ETSAKS+TNVE+AF +A I NR +
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDS 180
Query: 178 ASNNARPP 185
S+ A P
Sbjct: 181 NSSGAGGP 188
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 144/190 (75%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTV+ +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+G
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCD+ A + V E A A E GI F ETSAKS+ NV++AF ++A I + + + N
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
Query: 181 NARPPTVQIR 190
+PP+ ++
Sbjct: 181 GNKPPSTDLK 190
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 233 bits (595), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 147/194 (75%), Gaps = 5/194 (2%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCD+ + VS E + A + GI F+ETSAKS+TNVE+AF +A I ++ + +
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDS 180
Query: 181 NARPPTVQIRGQPV 194
N+ G PV
Sbjct: 181 NSAGA-----GGPV 189
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 147/197 (74%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCD+ + VS E + A + GI FMETSAK+ NVE AF +A IK +M + N
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 181 NARPPTVQIRGQPVNQK 197
+ + ++ P QK
Sbjct: 181 SPQGSNQGVKITPDQQK 197
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 147/197 (74%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCD+ + VS E + A + GI FMETSAK+ NVE AF +A IK +M + N
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 181 NARPPTVQIRGQPVNQK 197
+ + ++ P QK
Sbjct: 181 SPQGSNQGVKITPDQQK 197
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 147/197 (74%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCD+ + VS E + A + GI FMETSAK+ NVE AF +A IK +M + N
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 181 NARPPTVQIRGQPVNQK 197
+ + ++ P QK
Sbjct: 181 SPQGSNQGVKITPDQQK 197
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 233 bits (594), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 147/197 (74%)
Query: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASN 180
NKCD+ + VS E + A + GI FMETSAK+ NVE AF +A IK +M + N
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGN 180
Query: 181 NARPPTVQIRGQPVNQK 197
+ + ++ P QK
Sbjct: 181 SPQGSNQGVKITPDQQK 197
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,058,026
Number of Sequences: 539616
Number of extensions: 2494479
Number of successful extensions: 13875
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 11795
Number of HSP's gapped (non-prelim): 1300
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)