Query 028798
Match_columns 203
No_of_seqs 207 out of 1651
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 03:39:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028798.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028798hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 7.9E-30 2.7E-34 199.9 12.3 109 77-186 42-150 (151)
2 4eld_A MJ16.5-P1, small heat s 100.0 4.6E-29 1.6E-33 197.3 13.4 103 80-186 58-161 (161)
3 3gla_A Low molecular weight he 99.9 6.9E-27 2.4E-31 170.7 14.0 95 79-174 5-99 (100)
4 4fei_A Heat shock protein-rela 99.9 1.7E-25 5.8E-30 164.2 11.8 92 79-176 7-98 (102)
5 3aab_A Putative uncharacterize 99.9 1.7E-25 5.8E-30 169.3 10.4 92 79-175 25-118 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 3.6E-24 1.2E-28 158.3 14.4 100 80-187 4-106 (106)
7 2klr_A Alpha-crystallin B chai 99.9 2E-24 7E-29 172.9 11.2 103 80-192 65-168 (175)
8 2wj5_A Heat shock protein beta 99.9 5E-24 1.7E-28 156.2 10.8 96 80-186 3-99 (101)
9 3q9p_A Heat shock protein beta 99.9 1.6E-22 5.6E-27 143.7 11.0 82 83-172 2-84 (85)
10 2y1y_A Alpha-crystallin B chai 99.9 6.2E-22 2.1E-26 142.1 11.9 84 85-176 3-87 (90)
11 2bol_A TSP36, small heat shock 99.9 1.5E-21 5.1E-26 169.0 10.3 99 77-188 97-200 (314)
12 2bol_A TSP36, small heat shock 99.8 3.2E-20 1.1E-24 160.7 9.8 88 80-172 222-313 (314)
13 2xcm_C SGT1-like protein, cyto 99.0 2.7E-09 9.2E-14 75.5 8.1 80 79-174 3-82 (92)
14 1rl1_A Suppressor of G2 allele 98.9 3E-09 1E-13 78.4 8.5 80 79-174 10-89 (114)
15 3eud_A Protein SHQ1; CS domain 98.2 2.1E-05 7.3E-10 57.9 11.6 80 76-176 15-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.2 2.8E-06 9.7E-11 64.4 7.1 78 78-176 3-85 (134)
17 3igf_A ALL4481 protein; two-do 98.1 1.2E-05 4.2E-10 70.8 9.3 71 79-172 298-369 (374)
18 1x5m_A Calcyclin-binding prote 97.7 0.00053 1.8E-08 51.1 11.2 81 79-175 21-105 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.6 0.00038 1.3E-08 52.8 9.5 88 78-174 19-112 (134)
20 1wgv_A KIAA1068 protein; CS do 97.5 0.0013 4.4E-08 48.8 11.3 81 78-174 19-102 (124)
21 1ejf_A Progesterone receptor P 97.5 0.00064 2.2E-08 50.6 9.1 80 78-174 3-82 (125)
22 3qor_A Nuclear migration prote 97.4 0.0013 4.5E-08 48.7 10.2 79 77-174 15-97 (121)
23 1wfi_A Nuclear distribution ge 97.2 0.00096 3.3E-08 50.0 7.4 78 78-174 7-88 (131)
24 2rh0_A NUDC domain-containing 97.1 0.006 2.1E-07 47.2 11.0 76 79-174 14-91 (157)
25 2o30_A Nuclear movement protei 97.1 0.0061 2.1E-07 45.6 10.5 75 79-173 5-80 (131)
26 2kmw_A Uncharacterized protein 96.8 0.0034 1.2E-07 48.3 7.1 77 79-174 5-82 (150)
27 2cg9_X CO-chaperone protein SB 96.7 0.0011 3.7E-08 50.1 3.3 84 79-174 7-98 (134)
28 4eld_A MJ16.5-P1, small heat s 91.7 1.2 4.3E-05 33.8 9.1 34 141-175 68-101 (161)
29 3q9p_A Heat shock protein beta 81.7 3.4 0.00012 27.8 5.6 34 140-174 8-41 (85)
30 3gla_A Low molecular weight he 79.3 4.9 0.00017 27.6 5.9 35 140-175 15-49 (100)
31 2y1y_A Alpha-crystallin B chai 74.8 5.9 0.0002 26.8 5.2 32 141-173 8-39 (90)
32 2wj5_A Heat shock protein beta 71.7 7.3 0.00025 27.0 5.1 33 141-174 13-45 (101)
33 1gme_A Heat shock protein 16.9 68.7 20 0.00067 26.7 7.3 34 141-175 55-89 (151)
34 4fei_A Heat shock protein-rela 68.7 9.8 0.00034 26.3 5.3 33 140-173 17-49 (102)
35 3l1e_A Alpha-crystallin A chai 68.6 11 0.00036 26.4 5.5 33 140-173 13-45 (106)
36 3aab_A Putative uncharacterize 66.4 12 0.00043 26.6 5.6 34 141-175 36-70 (123)
37 2klr_A Alpha-crystallin B chai 52.7 20 0.00069 27.5 4.9 32 141-173 75-106 (175)
38 1rl6_A Protein (ribosomal prot 49.7 22 0.00074 27.6 4.6 46 101-172 11-56 (177)
39 2cql_A OK/SW-CL.103, 60S ribos 48.3 26 0.00088 24.5 4.4 19 101-120 20-38 (100)
40 1nkw_E 50S ribosomal protein L 47.2 45 0.0016 26.6 6.2 46 101-172 39-84 (212)
41 3j21_F 50S ribosomal protein L 41.6 42 0.0014 26.1 5.1 45 101-170 14-58 (184)
42 2nwt_A UPF0165 protein AF_2212 39.1 22 0.00076 23.3 2.7 15 154-168 3-17 (69)
43 1vq8_E 50S ribosomal protein L 35.5 36 0.0012 26.4 3.8 47 101-172 9-55 (178)
44 3v2d_H 50S ribosomal protein L 34.0 84 0.0029 24.2 5.8 44 101-170 12-55 (180)
45 1q5l_A Chaperone protein DNAK; 32.6 1E+02 0.0036 22.2 5.9 31 155-188 99-132 (135)
46 1ew4_A CYAY protein; friedreic 31.1 25 0.00085 24.9 2.1 18 155-172 29-46 (106)
47 3oeq_A Frataxin homolog, mitoc 30.0 70 0.0024 23.3 4.4 16 156-171 49-64 (123)
48 2o30_A Nuclear movement protei 28.5 78 0.0027 22.7 4.5 31 140-170 15-45 (131)
49 4awd_A Beta-porphyranase; hydr 28.5 1.3E+02 0.0046 25.2 6.6 48 100-150 85-145 (324)
50 2uwa_A Cellulase; glycoside hy 28.2 1E+02 0.0035 25.1 5.7 43 100-150 31-74 (274)
51 3iln_A Laminarinase; jelly ROW 27.9 92 0.0032 24.8 5.3 41 106-150 49-97 (251)
52 1n91_A ORF, hypothetical prote 27.5 1.1E+02 0.0038 21.6 5.0 35 83-119 8-43 (108)
53 3iz5_F 60S ribosomal protein L 27.0 65 0.0022 25.2 4.0 46 101-171 13-60 (190)
54 3rd4_A Uncharacterized protein 26.5 66 0.0022 22.6 3.5 25 85-109 33-57 (100)
55 2hyk_A Beta-1,3-glucanase; fam 25.8 45 0.0016 26.4 3.0 48 101-150 49-99 (245)
56 3dqg_A Heat shock 70 kDa prote 25.4 2E+02 0.0069 21.1 6.8 31 155-188 82-115 (151)
57 3dob_A Heat shock 70 kDa prote 24.2 2.1E+02 0.007 21.1 6.3 31 155-188 82-115 (152)
58 3h0x_A 78 kDa glucose-regulate 23.9 2.1E+02 0.007 21.0 6.3 31 155-188 82-115 (152)
59 4e81_A Chaperone protein DNAK; 22.0 2.3E+02 0.008 22.1 6.6 31 155-188 83-116 (219)
60 3u5e_H L8, RP24, YL11, 60S rib 21.9 1.2E+02 0.0041 23.6 4.7 46 101-171 13-59 (191)
61 3bbo_I Ribosomal protein L6; l 21.8 26 0.00091 28.2 0.8 47 101-172 54-100 (223)
62 1dyp_A Kappa-carrageenase; hyd 21.6 3E+02 0.01 21.8 7.3 20 100-122 44-63 (271)
63 3r8s_G 50S ribosomal protein L 21.2 32 0.0011 26.6 1.2 43 101-169 11-53 (176)
64 3n8e_A Stress-70 protein, mito 21.2 1.7E+02 0.0057 22.4 5.4 31 155-188 102-135 (182)
65 2zkr_e 60S ribosomal protein L 21.0 1.1E+02 0.0036 23.9 4.2 51 97-172 9-62 (192)
66 2ks0_A Uncharacterized protein 20.9 54 0.0018 21.5 2.1 25 95-120 14-38 (71)
67 2op6_A Heat shock 70 kDa prote 20.6 2.1E+02 0.0071 20.7 5.7 31 155-188 82-115 (152)
68 1wgv_A KIAA1068 protein; CS do 20.1 1.2E+02 0.0041 21.3 4.1 32 139-170 29-61 (124)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=7.9e-30 Score=199.90 Aligned_cols=109 Identities=50% Similarity=0.879 Sum_probs=98.3
Q ss_pred CCceeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCe
Q 028798 77 SPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSV 156 (203)
Q Consensus 77 ~~p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i 156 (203)
..|+++|+|++++|+|.++|||++++||+|++++++.|+|+|+++.+.+.++.+|+++||++|+|+|+|.||.+||.++|
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i 121 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEV 121 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGC
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccce
Confidence 34789999999999999999999999999999644479999999877777788999999999999999999999999999
Q ss_pred EEEEECCEEEEEEeccCCCCCCCCeEEEec
Q 028798 157 QAKLENGVLTLSLKKLSPDQIKGPRVVGIA 186 (203)
Q Consensus 157 ~A~~~dGvL~I~lPK~~~~~~~~~r~I~I~ 186 (203)
+|+|+||+|+|++||....+++ .++|+|+
T Consensus 122 ~A~~~nGvL~I~lPK~~~~~~~-~~~I~I~ 150 (151)
T 1gme_A 122 KAGLENGVLTVTVPKAEVKKPE-VKAIQIS 150 (151)
T ss_dssp EEEEETTEEEEEEECCCCCTTC-CCCCCCC
T ss_pred EEEEECCEEEEEEEccCcCCCC-CeEeeeC
Confidence 9999999999999999876643 5778875
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.96 E-value=4.6e-29 Score=197.29 Aligned_cols=103 Identities=21% Similarity=0.344 Sum_probs=95.4
Q ss_pred eeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEee-eeeEEEEEEECCCCcccCCeEE
Q 028798 80 RVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVER-SHGKFWRQFKLPDNVDLDSVQA 158 (203)
Q Consensus 80 ~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er-~~g~F~r~~~LP~~vd~~~i~A 158 (203)
++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++.+...++.+|+++|| .+|.|+|+|.||.+||.++|+|
T Consensus 58 pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A 136 (161)
T 4eld_A 58 PISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASA 136 (161)
T ss_dssp CEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEE
T ss_pred ceeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEE
Confidence 39999999999999999999999999999987 799999998766667778999999 9999999999999999999999
Q ss_pred EEECCEEEEEEeccCCCCCCCCeEEEec
Q 028798 159 KLENGVLTLSLKKLSPDQIKGPRVVGIA 186 (203)
Q Consensus 159 ~~~dGvL~I~lPK~~~~~~~~~r~I~I~ 186 (203)
+|+||+|+|++||.+..+ +|+|+|+
T Consensus 137 ~~~nGvL~I~lpK~~~~~---~r~I~Ie 161 (161)
T 4eld_A 137 KFENGVLSVILPKAESSI---KKGINIE 161 (161)
T ss_dssp EEETTEEEEEEEBCGGGS---CCCCCCC
T ss_pred EEECCEEEEEEEcCCCCC---CcEeecC
Confidence 999999999999987765 7888885
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.95 E-value=6.9e-27 Score=170.68 Aligned_cols=95 Identities=34% Similarity=0.658 Sum_probs=88.8
Q ss_pred ceeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEE
Q 028798 79 ARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQA 158 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A 158 (203)
|++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++.+...++.+|+++||.+|+|+|+|.||.+||.++|+|
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A 83 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITA 83 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEE
Confidence 689999999999999999999999999999987 7999999987777677889999999999999999999999999999
Q ss_pred EEECCEEEEEEeccCC
Q 028798 159 KLENGVLTLSLKKLSP 174 (203)
Q Consensus 159 ~~~dGvL~I~lPK~~~ 174 (203)
+|+||+|+|++||.+.
T Consensus 84 ~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 84 AGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEETTEEEEEEEBC--
T ss_pred EEeCCEEEEEEecCCC
Confidence 9999999999999864
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.93 E-value=1.7e-25 Score=164.20 Aligned_cols=92 Identities=36% Similarity=0.590 Sum_probs=85.4
Q ss_pred ceeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEE
Q 028798 79 ARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQA 158 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A 158 (203)
|++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++. ..+|+++||.+|+|.|+|.||.+||.+.|+|
T Consensus 7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A 80 (102)
T 4fei_A 7 PAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPASGVA 80 (102)
T ss_dssp CCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTTCCEE
T ss_pred CcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchhHcEE
Confidence 689999999999999999999999999999987 7999999853 3578899999999999999999999999999
Q ss_pred EEECCEEEEEEeccCCCC
Q 028798 159 KLENGVLTLSLKKLSPDQ 176 (203)
Q Consensus 159 ~~~dGvL~I~lPK~~~~~ 176 (203)
+|+||+|+|++||..+..
T Consensus 81 ~~~~GvL~I~lpK~~~~~ 98 (102)
T 4fei_A 81 SLAGGVLTVRFEKLRPTI 98 (102)
T ss_dssp EEETTEEEEEEEBSSCCC
T ss_pred EEECCEEEEEEEccCccc
Confidence 999999999999987653
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.92 E-value=1.7e-25 Score=169.35 Aligned_cols=92 Identities=27% Similarity=0.349 Sum_probs=85.7
Q ss_pred ceeeEEECCCeEEEEEEeCCCCCcceEEEEEc-CeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCe-
Q 028798 79 ARVDWKETPEGHFIMLDVPGVKRDELKIEVEE-NRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSV- 156 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i- 156 (203)
|+++|+|++++|+|.++|||++++||+|++.+ + .|+|+|+++.+. +.+|+++||++ +|.|+|.||.+||.++|
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~ 99 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDAEI 99 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTCCC
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcchhC
Confidence 68999999999999999999999999999998 7 799999986544 67899999999 99999999999999999
Q ss_pred EEEEECCEEEEEEeccCCC
Q 028798 157 QAKLENGVLTLSLKKLSPD 175 (203)
Q Consensus 157 ~A~~~dGvL~I~lPK~~~~ 175 (203)
+|+|+||+|+|++||....
T Consensus 100 ~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 100 SGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp EEEEETTEEEEEEEGGGEE
T ss_pred eeEEcCCEEEEEEEcCCCC
Confidence 9999999999999998653
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.92 E-value=3.6e-24 Score=158.29 Aligned_cols=100 Identities=23% Similarity=0.461 Sum_probs=86.2
Q ss_pred eeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEE
Q 028798 80 RVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAK 159 (203)
Q Consensus 80 ~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~ 159 (203)
..+|+|++++|.|.++||||+++||+|+++++ .|+|+|++.... ++.+|++++ |.|+|.||.+||.++|+|+
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 75 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQ--DDHGYISRE-----FHRRYRLPSNVDQSALSCS 75 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEE--TTTEEEEEE-----EEEEEECCTTBCTTSCEEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccc--CCCCEEEEE-----EEEEEECCCCcChhHcEEE
Confidence 48999999999999999999999999999987 799999875432 345566554 9999999999999999999
Q ss_pred E-ECCEEEEEEeccCCCC--CCCCeEEEecc
Q 028798 160 L-ENGVLTLSLKKLSPDQ--IKGPRVVGIAG 187 (203)
Q Consensus 160 ~-~dGvL~I~lPK~~~~~--~~~~r~I~I~~ 187 (203)
| +||+|+|++||..+.. ...+|+|+|+.
T Consensus 76 ~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~r 106 (106)
T 3l1e_A 76 LSADGMLTFSGPKIPSGVDAGHSERAIPVSR 106 (106)
T ss_dssp ECTTSEEEEEEEBCCCCTTTTSSSCCCCCCC
T ss_pred ECCCCEEEEEEEccCcccccCCCCeEeeecC
Confidence 9 7999999999998863 22489999963
No 7
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.91 E-value=2e-24 Score=172.90 Aligned_cols=103 Identities=23% Similarity=0.391 Sum_probs=73.6
Q ss_pred eeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEE
Q 028798 80 RVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAK 159 (203)
Q Consensus 80 ~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~ 159 (203)
.++|+|++++|+|.++||||+++||+|+++++ .|+|+|+++.+. ++.+|+++| |.|+|.||.+||.++|+|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~--~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~ 136 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSS 136 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEE--ETTEEEEEE-----EEEEEECTTTCCTTTCEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccc--cCCceEEEE-----EEEEEECCCCcChhHeEEE
Confidence 47999999999999999999999999999987 799999986543 345677665 9999999999999999999
Q ss_pred E-ECCEEEEEEeccCCCCCCCCeEEEeccCCCCc
Q 028798 160 L-ENGVLTLSLKKLSPDQIKGPRVVGIAGGEDEP 192 (203)
Q Consensus 160 ~-~dGvL~I~lPK~~~~~~~~~r~I~I~~~~~~~ 192 (203)
| +||+|+|++||....+ .+|+|+|+.+++.+
T Consensus 137 ~s~dGvL~I~lPK~~~~~--~~r~I~I~~~~~~~ 168 (175)
T 2klr_A 137 LSSDGVLTVNGPRKQVSG--PERTIPITREEKPA 168 (175)
T ss_dssp ECTTSCEEEEEECC--------------------
T ss_pred EcCCCEEEEEEECCCCCC--CCeEEEEecCCccc
Confidence 9 6999999999987543 25899998776544
No 8
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.91 E-value=5e-24 Score=156.22 Aligned_cols=96 Identities=22% Similarity=0.330 Sum_probs=81.9
Q ss_pred eeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEE
Q 028798 80 RVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAK 159 (203)
Q Consensus 80 ~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~ 159 (203)
.+||+|++++|.|.++|||++++||+|+++++ .|+|+|++..+. ++.+|+++| |+|+|.||.+||.++|+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence 48999999999999999999999999999987 799999986533 345566665 9999999999999999999
Q ss_pred E-ECCEEEEEEeccCCCCCCCCeEEEec
Q 028798 160 L-ENGVLTLSLKKLSPDQIKGPRVVGIA 186 (203)
Q Consensus 160 ~-~dGvL~I~lPK~~~~~~~~~r~I~I~ 186 (203)
| +||+|+|++||....+ ++.++|.
T Consensus 75 ~s~nGvL~I~lPK~~~~~---~~~~~i~ 99 (101)
T 2wj5_A 75 LSPEGVLSIQATPASAQA---SLPSPPA 99 (101)
T ss_dssp ECTTSEEEEEECBCCCCC---SSCC---
T ss_pred ECCCCEEEEEEECCCcCC---CCCCccc
Confidence 9 7999999999998776 4555554
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.88 E-value=1.6e-22 Score=143.71 Aligned_cols=82 Identities=24% Similarity=0.389 Sum_probs=69.1
Q ss_pred EEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEE-
Q 028798 83 WKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLE- 161 (203)
Q Consensus 83 i~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~- 161 (203)
+.|++++|.|.++||||+++||+|+++++ .|+|+|+++..... .+ ..+|+|.|+|.||.+||.++|+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~--~~-----~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDE--HG-----YISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCC--CC-----EEEEEEEEEEECCCCcChHHcEEEECC
Confidence 35799999999999999999999999987 79999998754322 12 23578999999999999999999998
Q ss_pred CCEEEEEEecc
Q 028798 162 NGVLTLSLKKL 172 (203)
Q Consensus 162 dGvL~I~lPK~ 172 (203)
||+|+|++||.
T Consensus 74 ~GvL~I~lPK~ 84 (85)
T 3q9p_A 74 EGTLTVEAPMP 84 (85)
T ss_dssp TSEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999996
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.87 E-value=6.2e-22 Score=142.06 Aligned_cols=84 Identities=24% Similarity=0.430 Sum_probs=69.7
Q ss_pred ECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEE-ECC
Q 028798 85 ETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKL-ENG 163 (203)
Q Consensus 85 e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~-~dG 163 (203)
+++++|+|.++|||++++||+|++.++ .|+|+|++.... ++.+|+++| |.|+|.||.+||.++|+|+| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~--~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEE--CSSSEEEEE-----EEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHcEEEECCCC
Confidence 688999999999999999999999987 799999986542 445677655 99999999999999999999 799
Q ss_pred EEEEEEeccCCCC
Q 028798 164 VLTLSLKKLSPDQ 176 (203)
Q Consensus 164 vL~I~lPK~~~~~ 176 (203)
+|+|++||...++
T Consensus 75 vL~I~~pK~~~~~ 87 (90)
T 2y1y_A 75 VLTVNGPRKQVSG 87 (90)
T ss_dssp EEEEEECBC----
T ss_pred EEEEEEEcCCCCC
Confidence 9999999987765
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.85 E-value=1.5e-21 Score=169.03 Aligned_cols=99 Identities=19% Similarity=0.259 Sum_probs=84.9
Q ss_pred CCceeeEEECCC----eEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcc
Q 028798 77 SPARVDWKETPE----GHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVD 152 (203)
Q Consensus 77 ~~p~~di~e~~d----~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd 152 (203)
..|++|++|+++ +|+|+++|||++++||+|+++++ .|+|+|+++.+.+ + .+.+|+|+|+|.||.+||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e--~------~r~~g~F~R~~~LP~~Vd 167 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACG--D------AAMSESVGRSIPLPPSVD 167 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTT--C------CCBCCCEEEEEECCTTBC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCC--C------CEEEEEEEEEEECCCCcc
Confidence 347899999999 99999999999999999999987 7999999864322 1 177899999999999999
Q ss_pred cCCeEEEEE-CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 153 LDSVQAKLE-NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 153 ~~~i~A~~~-dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
.++|+|+|+ ||+|+|++||..++. +.|.|+.+
T Consensus 168 ~e~i~A~~~~nGVL~I~lPK~~~~~----~~I~it~~ 200 (314)
T 2bol_A 168 RNHIQATITTDDVLVIEAPVNEPNY----KAIKLSPE 200 (314)
T ss_dssp GGGCEEEECSSSEEEEEEEBSSCCT----TTEEEETT
T ss_pred ccccEEEEeCCCEEEEEEeccCccc----ceeecccC
Confidence 999999999 999999999988664 33655543
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.82 E-value=3.2e-20 Score=160.66 Aligned_cols=88 Identities=20% Similarity=0.360 Sum_probs=69.6
Q ss_pred eeeEEECC---CeEEEEEEe-CCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCC
Q 028798 80 RVDWKETP---EGHFIMLDV-PGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDS 155 (203)
Q Consensus 80 ~~di~e~~---d~y~i~~~L-PG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~ 155 (203)
.++|.+++ +.|.|.++| ||++|+||+|++++| +|+|+|+++.+.+ .++++||++|+|+|+|.||++||.++
T Consensus 222 ~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~~ 296 (314)
T 2bol_A 222 GLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDASK 296 (314)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC----------------CEEEEEEEECSSEECGGG
T ss_pred CCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChHH
Confidence 35666654 478999999 999999999999987 7999999876433 46889999999999999999999999
Q ss_pred eEEEEECCEEEEEEecc
Q 028798 156 VQAKLENGVLTLSLKKL 172 (203)
Q Consensus 156 i~A~~~dGvL~I~lPK~ 172 (203)
|+|+|+||||+|++||.
T Consensus 297 i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 297 TQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp CEEEEETTEEEEEEEEE
T ss_pred eEEEEeCCEEEEEEecC
Confidence 99999999999999986
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.95 E-value=2.7e-09 Score=75.54 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=70.2
Q ss_pred ceeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEE
Q 028798 79 ARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQA 158 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A 158 (203)
++++|+++++.+.|++.+||+.++++.|.+.++ .|.|++... ++ ..|...+.|+..|+++..++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~-~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~~~s~~ 66 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ-ILSVVIEVP-----GE----------DAYYLQPRLFGKIIPDKCKY 66 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSS-BEEEEECCT-----TS----------CCEEECCBBSSCBCGGGCEE
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECC-EEEEEEEcC-----CC----------cEEEEeeEcCCccCchhEEE
Confidence 689999999999999999999999999999987 589987431 11 23888889999999999999
Q ss_pred EEECCEEEEEEeccCC
Q 028798 159 KLENGVLTLSLKKLSP 174 (203)
Q Consensus 159 ~~~dGvL~I~lPK~~~ 174 (203)
++.+|.|.|+|+|+.+
T Consensus 67 ~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 67 EVLSTKIEICLAKADI 82 (92)
T ss_dssp EECSSCEEEEEEBSSS
T ss_pred EEECCEEEEEEEcCCC
Confidence 9999999999999864
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.94 E-value=3e-09 Score=78.44 Aligned_cols=80 Identities=19% Similarity=0.294 Sum_probs=70.5
Q ss_pred ceeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEE
Q 028798 79 ARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQA 158 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A 158 (203)
++++|+++++.+.|++.+||+.++++.|.+.++ .|.|++... ++ ..|...+.|+..|+++..++
T Consensus 10 ~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~-~l~v~~~~~-----~~----------~~y~~~~~L~~~I~~e~s~~ 73 (114)
T 1rl1_A 10 IKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKLP-----SG----------EDYNLKLELLHPIIPEQSTF 73 (114)
T ss_dssp CCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEECT-----TS----------SEEEEEECBSSCCCGGGEEE
T ss_pred CCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC-EEEEEEEeC-----CC----------cEEEEEeeCCCcCCccccEE
Confidence 679999999999999999999999999999987 599987532 11 23888899999999999999
Q ss_pred EEECCEEEEEEeccCC
Q 028798 159 KLENGVLTLSLKKLSP 174 (203)
Q Consensus 159 ~~~dGvL~I~lPK~~~ 174 (203)
++.+|.|+|+|+|+.+
T Consensus 74 ~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 74 KVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EECSSSEEEEEECSSC
T ss_pred EEECCEEEEEEEcCCC
Confidence 9999999999999874
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.23 E-value=2.1e-05 Score=57.87 Aligned_cols=80 Identities=15% Similarity=0.353 Sum_probs=68.5
Q ss_pred CCCceeeEEECCCeEEEEEEeCCCC--CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCc-c
Q 028798 76 LSPARVDWKETPEGHFIMLDVPGVK--RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNV-D 152 (203)
Q Consensus 76 ~~~p~~di~e~~d~y~i~~~LPG~~--~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~v-d 152 (203)
+..|...+.++++...|.+.+|.++ ..++++.++++ .+....+ .|.-++.||..| +
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~-~F~F~~~--------------------PYyLRL~lP~~vve 73 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHLS--------------------PYYLRLRFPHELID 73 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETT-EEEEEET--------------------TEEEEEECSSCEEC
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCC-EEEEecC--------------------CeEEEEecCcceec
Confidence 4457899999999999999999877 88999999987 6766642 277889999998 7
Q ss_pred cCCeEEEEE--CCEEEEEEeccCCCC
Q 028798 153 LDSVQAKLE--NGVLTLSLKKLSPDQ 176 (203)
Q Consensus 153 ~~~i~A~~~--dGvL~I~lPK~~~~~ 176 (203)
.+.-+|+|+ +|.++|++||..+.+
T Consensus 74 d~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 74 DERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp STTCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCCcceEEeCCCcEEEEEEcCCcCCC
Confidence 777899999 999999999998765
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.23 E-value=2.8e-06 Score=64.44 Aligned_cols=78 Identities=15% Similarity=0.358 Sum_probs=68.0
Q ss_pred CceeeEEECCCeEEEEEEeCCCC--CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCc-ccC
Q 028798 78 PARVDWKETPEGHFIMLDVPGVK--RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNV-DLD 154 (203)
Q Consensus 78 ~p~~di~e~~d~y~i~~~LPG~~--~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~v-d~~ 154 (203)
.|...+.++++..+|.+.+|..+ ..+++|.+++. .+..... .|.-++.||..| +.+
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~-~F~F~~~--------------------PYyLRL~LP~~V~e~~ 61 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHLS--------------------PYYLRLRFPHELIDDE 61 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSS-SEEECSS--------------------SSCEEECCSSCEECCS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCC-EEEEecC--------------------CeEEEecCCCeeecCC
Confidence 36889999999999999999999 89999999986 5766642 277789999999 888
Q ss_pred CeEEEEE--CCEEEEEEeccCCCC
Q 028798 155 SVQAKLE--NGVLTLSLKKLSPDQ 176 (203)
Q Consensus 155 ~i~A~~~--dGvL~I~lPK~~~~~ 176 (203)
.-+|+|. .|.|+|++||..+.+
T Consensus 62 ~~kA~YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESSTTC
T ss_pred CcceeEeccCCEEEEEEeCCCCCC
Confidence 8999999 899999999988664
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.08 E-value=1.2e-05 Score=70.77 Aligned_cols=71 Identities=20% Similarity=0.284 Sum_probs=59.6
Q ss_pred ceeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCC-eE
Q 028798 79 ARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDS-VQ 157 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~-i~ 157 (203)
+++.+... .|.+++.|||+++++|++...++ .|+|++ |.|+|.+.||..+.... ..
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~~--------------------g~~rR~i~LP~~L~~~~v~~ 354 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVEA--------------------GDQRRNIFLPPALSGRPITG 354 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEEE--------------------TTEEEEEECCTTTTTCCEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEEE--------------------CCEeecccCCHHHcCCCccc
Confidence 34555443 89999999999999999999987 699995 55999999999886554 78
Q ss_pred EEEECCEEEEEEecc
Q 028798 158 AKLENGVLTLSLKKL 172 (203)
Q Consensus 158 A~~~dGvL~I~lPK~ 172 (203)
|+|+||.|+|++-..
T Consensus 355 A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 355 AKFQNNYLIISFLEH 369 (374)
T ss_dssp EEEETTEEEEEECCC
T ss_pred cEEECCEEEEEEehh
Confidence 999999999998643
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.70 E-value=0.00053 Score=51.15 Aligned_cols=81 Identities=11% Similarity=0.263 Sum_probs=67.0
Q ss_pred ceeeEEECCCeEEEEEEeCCC---CCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEE-CCCCcccC
Q 028798 79 ARVDWKETPEGHFIMLDVPGV---KRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFK-LPDNVDLD 154 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~---~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~-LP~~vd~~ 154 (203)
++++|+++.+...|.+.++|+ .++++.|.+.++ .|.|++... .+. .|.-.+. |-..|+++
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~-~l~v~~~~~-----~~~----------~y~~~~~~L~~~I~~e 84 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTER-SFDLLVKNL-----NGK----------SYSMIVNNLLKPISVE 84 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSS-EEEEEECSC-----SSS----------CEEEEEECBSSCCCTT
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcC-EEEEEEEcC-----CCC----------cEEEEhHHhcCccCcc
Confidence 478999999999999999999 899999999987 588886321 111 2666775 99999999
Q ss_pred CeEEEEECCEEEEEEeccCCC
Q 028798 155 SVQAKLENGVLTLSLKKLSPD 175 (203)
Q Consensus 155 ~i~A~~~dGvL~I~lPK~~~~ 175 (203)
.-+.++..+.+.|+|-|+.+.
T Consensus 85 ~S~~~v~~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 85 GSSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp TCEEEEETTEEEEEEECSSSS
T ss_pred cCEEEEeCCEEEEEEEECCCC
Confidence 888888999999999998753
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.63 E-value=0.00038 Score=52.75 Aligned_cols=88 Identities=16% Similarity=0.205 Sum_probs=68.2
Q ss_pred CceeeEEEC-CCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeee-----eccCCeEEEEeeeeeEEEEEEECCCCc
Q 028798 78 PARVDWKET-PEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREE-----EKKGDQWHRVERSHGKFWRQFKLPDNV 151 (203)
Q Consensus 78 ~p~~di~e~-~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~-----~~~~~~~~~~er~~g~F~r~~~LP~~v 151 (203)
.++++|+++ .+...|.+.++++.++++.|.+.++ .|.|+....... ...+.. -.|.-.+.|-..|
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~-~l~v~~~~~~~~~l~~~~a~g~~--------~~y~~~~~L~~~I 89 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQ-DFTLIFQTRDGNFLRLHPGCGPH--------TTFRWQVKLRNLI 89 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSS-EEEEEECBCCHHHHHHSTTCCTT--------SCEEEEEEBSSCE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECC-EEEEEEEcCCCcccccccccCcc--------eeEEEeccccccC
Confidence 468999999 9999999999999999999999987 588886432110 000000 0377778899999
Q ss_pred ccCCeEEEEECCEEEEEEeccCC
Q 028798 152 DLDSVQAKLENGVLTLSLKKLSP 174 (203)
Q Consensus 152 d~~~i~A~~~dGvL~I~lPK~~~ 174 (203)
+++.-+.++..+.+.|+|.|+..
T Consensus 90 ~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 90 EPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEEECSSEEEEEEEESSS
T ss_pred CchhCEEEEeCCEEEEEEEECCC
Confidence 99987777889999999999864
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.54 E-value=0.0013 Score=48.82 Aligned_cols=81 Identities=20% Similarity=0.333 Sum_probs=64.5
Q ss_pred CceeeEEECCCeEEEEEEeC-CC-CCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCC
Q 028798 78 PARVDWKETPEGHFIMLDVP-GV-KRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDS 155 (203)
Q Consensus 78 ~p~~di~e~~d~y~i~~~LP-G~-~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~ 155 (203)
-|.+.|.++.+...|++.|| |+ ++++|.|.+..+ .|.|.+... .+.. +.-...|...|+++.
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~-~l~v~~~~~-----~~~~----------~~~~~~L~~~I~~e~ 82 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAMLEE-----NGER----------VLMEGKLTHKINTES 82 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEECS-----SSEE----------EEEEEEBSSCBCTTT
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcC-EEEEEEEcc-----CCCc----------eEEcccccCcCCCcC
Confidence 36899999999999999998 88 899999999987 588876321 1111 234457999999998
Q ss_pred eEEEEECCE-EEEEEeccCC
Q 028798 156 VQAKLENGV-LTLSLKKLSP 174 (203)
Q Consensus 156 i~A~~~dGv-L~I~lPK~~~ 174 (203)
-...+++|. |.|+|-|+..
T Consensus 83 S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 83 SLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp CEEEECTTSEEEEEECBSSS
T ss_pred CEEEEeCCCEEEEEEEECCC
Confidence 888888875 9999999863
No 21
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.50 E-value=0.00064 Score=50.62 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=65.3
Q ss_pred CceeeEEECCCeEEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeE
Q 028798 78 PARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQ 157 (203)
Q Consensus 78 ~p~~di~e~~d~y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~ 157 (203)
||.++|+++.+...|++.+|+. +++.|.+..+ .|.+++.-.. ++ ..|.-.+.|-..|+++.-+
T Consensus 3 P~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~-~l~~~~~~~~----~~----------~~y~~~l~L~~~I~~e~S~ 65 (125)
T 1ejf_A 3 PASAKWYDRRDYVFIEFCVEDS--KDVNVNFEKS-KLTFSCLGGS----DN----------FKHLNEIDLFHCIDPNDSK 65 (125)
T ss_dssp CCCEEEEECSSEEEEEECCTTE--EEEEEEEETT-EEEEEEEETT----TT----------EEEEEEEEBSSCEEEEEEE
T ss_pred CCceeEEeCCCEEEEEEEecCC--CceEEEEECC-EEEEEEEeCC----CC----------ceEEEEEEccceeccccCE
Confidence 4589999999999999999995 7999999987 5888874310 11 1277778999999999888
Q ss_pred EEEECCEEEEEEeccCC
Q 028798 158 AKLENGVLTLSLKKLSP 174 (203)
Q Consensus 158 A~~~dGvL~I~lPK~~~ 174 (203)
.++.++.+.|+|.|+.+
T Consensus 66 ~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 66 HKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEECSSCEEEEEEESST
T ss_pred EEECCCEEEEEEEECCC
Confidence 88888899999999864
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.45 E-value=0.0013 Score=48.67 Aligned_cols=79 Identities=16% Similarity=0.266 Sum_probs=63.3
Q ss_pred CCceeeEEECCCeEEEEEEeC-C--CCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCccc
Q 028798 77 SPARVDWKETPEGHFIMLDVP-G--VKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDL 153 (203)
Q Consensus 77 ~~p~~di~e~~d~y~i~~~LP-G--~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~ 153 (203)
..|.+.|.++.+...|++.|| | ++++||.|.+..+ .|.|..+- .. +.-...|...|++
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~-~l~v~~kg--------~~----------~~~~g~L~~~I~~ 75 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR-HLRVGLKG--------QP----------AIIDGELYNEVKV 75 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETT-EEEEEETT--------SC----------CSEEEEBSSCBCG
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcC-EEEEEEcC--------cc----------eEEeccccccccc
Confidence 346799999999999999998 4 7899999999987 58776421 10 1223478899999
Q ss_pred CCeEEEEECC-EEEEEEeccCC
Q 028798 154 DSVQAKLENG-VLTLSLKKLSP 174 (203)
Q Consensus 154 ~~i~A~~~dG-vL~I~lPK~~~ 174 (203)
+.-...+++| .|.|+|-|...
T Consensus 76 deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 76 EESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp GGCEEEEETTTEEEEEEEBSSS
T ss_pred cccEEEEcCCCEEEEEEEECCC
Confidence 9888899998 99999999864
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.24 E-value=0.00096 Score=49.97 Aligned_cols=78 Identities=19% Similarity=0.314 Sum_probs=63.0
Q ss_pred CceeeEEECCCeEEEEEEeC-C--CCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccC
Q 028798 78 PARVDWKETPEGHFIMLDVP-G--VKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLD 154 (203)
Q Consensus 78 ~p~~di~e~~d~y~i~~~LP-G--~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~ 154 (203)
.|.+.|.++.+...|++.|| | +++++|.|.+..+ .|.|..+ +.. +.-...|...|+++
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~-~l~v~~k--------g~~----------~~~~~~L~~~I~~e 67 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRR-HLRVGLK--------GQP----------PVVDGELYNEVKVE 67 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETT-EEEEEET--------TSC----------CSBCSCBSSCBCST
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCC-EEEEEEC--------Cce----------EEEecccccccccc
Confidence 36899999999999999999 6 8999999999987 5888752 110 11123688899999
Q ss_pred CeEEEEECC-EEEEEEeccCC
Q 028798 155 SVQAKLENG-VLTLSLKKLSP 174 (203)
Q Consensus 155 ~i~A~~~dG-vL~I~lPK~~~ 174 (203)
.-.-.+++| .|.|+|-|...
T Consensus 68 ~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 68 ESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp TCEEEEETTTEEEEEEEBSSS
T ss_pred cCEEEEcCCCEEEEEEEECCC
Confidence 888889988 89999999875
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.12 E-value=0.006 Score=47.18 Aligned_cols=76 Identities=22% Similarity=0.315 Sum_probs=62.9
Q ss_pred ceeeEEECCCeEEEEEEeC-CCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeE
Q 028798 79 ARVDWKETPEGHFIMLDVP-GVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQ 157 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LP-G~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~ 157 (203)
|.+.|.++.+...|++.|| |+++++|.|.+..+ .|.|..+ +.. + -...|...|+++.-.
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~-~L~v~~k--------g~~----------~-l~g~L~~~I~~eeS~ 73 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSR-HVALAVG--------GRE----------I-LKGKLFDSTIADEGT 73 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEECSS-EEEEEET--------TEE----------E-EEEEBSSCBCGGGCE
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEEecC-EEEEEEC--------CEE----------E-EeeccccccCccccE
Confidence 6799999999999999998 89999999999987 5888752 110 1 234789999999888
Q ss_pred EEEECCE-EEEEEeccCC
Q 028798 158 AKLENGV-LTLSLKKLSP 174 (203)
Q Consensus 158 A~~~dGv-L~I~lPK~~~ 174 (203)
.++++|. |.|+|-|+..
T Consensus 74 w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 74 WTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp EEEECCCEEEEEEEBSSC
T ss_pred EEEcCCcEEEEEEEEcCC
Confidence 8899875 9999999875
No 25
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.09 E-value=0.0061 Score=45.58 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=60.4
Q ss_pred ceeeEEECCCeEEEEEEeC-CCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeE
Q 028798 79 ARVDWKETPEGHFIMLDVP-GVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQ 157 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LP-G~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~ 157 (203)
|.+.|.++.+...|++.|| |+++++|.|.+..+ .|.|.+. +.. .-...|...|+++.-.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~--------g~~-----------~~~~~L~~~I~~e~S~ 64 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGK-KICVKNQ--------GEI-----------VIDGELLHEVDVSSLW 64 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETT-EEEEEET--------TEE-----------EEEEEBSSCEEEEEEE
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECC-EEEEEEC--------CEe-----------eEccccccccccccCE
Confidence 6799999999999999996 99999999999987 5888752 111 1234788899999888
Q ss_pred EEEECCEEEEEEeccC
Q 028798 158 AKLENGVLTLSLKKLS 173 (203)
Q Consensus 158 A~~~dGvL~I~lPK~~ 173 (203)
..+++|.|.|+|-|..
T Consensus 65 w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 65 WVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEETTEEEEEEEESS
T ss_pred EEEeCCEEEEEEEECC
Confidence 8888999999999984
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.81 E-value=0.0034 Score=48.27 Aligned_cols=77 Identities=13% Similarity=0.323 Sum_probs=62.6
Q ss_pred ceeeEEECCCeEEEEEEeCCCCCcceEEEEE-cCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeE
Q 028798 79 ARVDWKETPEGHFIMLDVPGVKRDELKIEVE-ENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQ 157 (203)
Q Consensus 79 p~~di~e~~d~y~i~~~LPG~~~edI~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~ 157 (203)
|.++|+++.+...|++.++++ +++.|.+. .+ .|.+++. . ..+ ..|.-.+.|=..|+++ -+
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~-~l~~~~~-~----~~~----------~~y~~~l~L~~~Idpe-S~ 65 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQG-LFSFSAL-G----AQG----------ERFEFSLELYGKIMTE-YR 65 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTE-EEEEEEE-T----TTT----------EEEEEEEEBSSCEEEE-EE
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCC-EEEEEEE-c----CCC----------ceEEEEeEhhhccccc-ce
Confidence 689999999999999999997 58999998 55 6999975 1 111 1277778899999999 77
Q ss_pred EEEECCEEEEEEeccCC
Q 028798 158 AKLENGVLTLSLKKLSP 174 (203)
Q Consensus 158 A~~~dGvL~I~lPK~~~ 174 (203)
.+.....+.|+|.|+.+
T Consensus 66 ~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 66 KNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEESSSEEEEEEECCS
T ss_pred EEecCCEEEEEEEECCC
Confidence 77778889999999874
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.0011 Score=50.09 Aligned_cols=84 Identities=14% Similarity=0.258 Sum_probs=59.2
Q ss_pred ceeeEEECCCe-------EEEEEEeCCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCc
Q 028798 79 ARVDWKETPEG-------HFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNV 151 (203)
Q Consensus 79 p~~di~e~~d~-------y~i~~~LPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~v 151 (203)
|.+.|+++.+. ..|++.+|++ .++.|.+..+ .|.+++.........++ ..|.-.+.|...|
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~-~l~~~~~~~~~~g~~~~---------~~y~~~l~L~~~I 74 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPS-YIELKAQSKPHVGDENV---------HHYQLHIDLYKEI 74 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSS-EEEECCEEC-------C---------EEBCEEEECSSCC
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECC-EEEEEEecccccCCccC---------ceEEEEEEChhhc
Confidence 67888888776 8999999997 4888999887 68898753210000000 1277778999999
Q ss_pred ccCCeEEEEECCE-EEEEEeccCC
Q 028798 152 DLDSVQAKLENGV-LTLSLKKLSP 174 (203)
Q Consensus 152 d~~~i~A~~~dGv-L~I~lPK~~~ 174 (203)
+++.-+.++.++. +.|+|.|+.+
T Consensus 75 dpe~S~~~v~~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 75 IPEKTMHKVANGQHYFLKLYKKDL 98 (134)
T ss_dssp CSSSEEEEECCC--CEEEEEECSS
T ss_pred cccccEEEECCCEEEEEEEEECCC
Confidence 9999999999888 9999999873
No 28
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=91.65 E-value=1.2 Score=33.77 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=28.3
Q ss_pred EEEEEECCCCcccCCeEEEEECCEEEEEEeccCCC
Q 028798 141 FWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPD 175 (203)
Q Consensus 141 F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~~~ 175 (203)
|.-.+.|| +++.+.|+.++++|.|+|+.-+....
T Consensus 68 ~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~~ 101 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPLM 101 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTEEEEEEECCCCC
T ss_pred EEEEEECC-CCChHhEEEEEECCEEEEEEEEcccc
Confidence 44556888 68999999999999999999887743
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=81.66 E-value=3.4 Score=27.83 Aligned_cols=34 Identities=15% Similarity=0.310 Sum_probs=29.2
Q ss_pred EEEEEEECCCCcccCCeEEEEECCEEEEEEeccCC
Q 028798 140 KFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSP 174 (203)
Q Consensus 140 ~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~~ 174 (203)
.|.-.+.|| +++.+.|+-.+++|.|+|+.-+...
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAAR 41 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC--
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEccc
Confidence 388889999 7999999999999999999987653
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=79.34 E-value=4.9 Score=27.60 Aligned_cols=35 Identities=20% Similarity=0.454 Sum_probs=29.9
Q ss_pred EEEEEEECCCCcccCCeEEEEECCEEEEEEeccCCC
Q 028798 140 KFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPD 175 (203)
Q Consensus 140 ~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~~~ 175 (203)
.|.-.+.|| +++.+.|+-.+++|.|+|+.-+....
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~~ 49 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSES 49 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCGG
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCcC
Confidence 377778999 69999999999999999999876543
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=74.81 E-value=5.9 Score=26.84 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=29.0
Q ss_pred EEEEEECCCCcccCCeEEEEECCEEEEEEeccC
Q 028798 141 FWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLS 173 (203)
Q Consensus 141 F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~ 173 (203)
|.-.+.|| +++.+.|+-.+.+|.|+|+.-+..
T Consensus 8 ~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 8 FSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp EEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 88889999 799999999999999999998754
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=71.72 E-value=7.3 Score=27.04 Aligned_cols=33 Identities=6% Similarity=0.134 Sum_probs=29.6
Q ss_pred EEEEEECCCCcccCCeEEEEECCEEEEEEeccCC
Q 028798 141 FWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSP 174 (203)
Q Consensus 141 F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~~ 174 (203)
|.-.+.|| +++.+.|+-.+++|.|+|+.-+...
T Consensus 13 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~~ 45 (101)
T 2wj5_A 13 FSVLLDVK-HFSPEEISVKVVGDHVEVHARHEER 45 (101)
T ss_dssp EEEEEECT-TSCGGGEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEECC-CCcHHHeEEEEECCEEEEEEEEecc
Confidence 77888999 8999999999999999999988653
No 33
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=68.70 E-value=20 Score=26.73 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=27.3
Q ss_pred EEEEEECCCCcccCCeEEEEE-CCEEEEEEeccCCC
Q 028798 141 FWRQFKLPDNVDLDSVQAKLE-NGVLTLSLKKLSPD 175 (203)
Q Consensus 141 F~r~~~LP~~vd~~~i~A~~~-dGvL~I~lPK~~~~ 175 (203)
|.-.+.|| +++.+.|+..++ ++.|+|+.-+....
T Consensus 55 ~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~~ 89 (151)
T 1gme_A 55 HVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKEK 89 (151)
T ss_dssp EEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCCC
T ss_pred EEEEEECC-CCChHHEEEEEecCCEEEEEEEEcccc
Confidence 44455888 789999999996 67999999877654
No 34
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=68.68 E-value=9.8 Score=26.30 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=28.8
Q ss_pred EEEEEEECCCCcccCCeEEEEECCEEEEEEeccC
Q 028798 140 KFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLS 173 (203)
Q Consensus 140 ~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~ 173 (203)
.|.-.+.|| +++.+.|+-.++++.|+|+.-+..
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 49 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAEDGGQLTVSGERPG 49 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEEETTEEEEEEEECC
T ss_pred EEEEEEECC-CCchHhEEEEEECCEEEEEEEEec
Confidence 377788999 799999999999999999988754
No 35
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=68.62 E-value=11 Score=26.45 Aligned_cols=33 Identities=12% Similarity=0.200 Sum_probs=28.8
Q ss_pred EEEEEEECCCCcccCCeEEEEECCEEEEEEeccC
Q 028798 140 KFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLS 173 (203)
Q Consensus 140 ~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~ 173 (203)
.|.-.+.|| +++.+.|+-.+++|.|+|+.-+..
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 45 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHNE 45 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 388888999 799999999999999999997543
No 36
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=66.38 E-value=12 Score=26.65 Aligned_cols=34 Identities=9% Similarity=0.195 Sum_probs=28.2
Q ss_pred EEEEEECCCCcccCCeEEEEEC-CEEEEEEeccCCC
Q 028798 141 FWRQFKLPDNVDLDSVQAKLEN-GVLTLSLKKLSPD 175 (203)
Q Consensus 141 F~r~~~LP~~vd~~~i~A~~~d-GvL~I~lPK~~~~ 175 (203)
|.-.+.|| +++.+.|+-.+++ |.|+|+.-+....
T Consensus 36 ~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~ 70 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARVSGQNELIIEAEREITE 70 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCCC
T ss_pred EEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEeccC
Confidence 55556888 6899999999999 9999999977643
No 37
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=52.65 E-value=20 Score=27.55 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=28.2
Q ss_pred EEEEEECCCCcccCCeEEEEECCEEEEEEeccC
Q 028798 141 FWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLS 173 (203)
Q Consensus 141 F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~~ 173 (203)
|.-.+.|| +++.+.|+.++++|.|+|+.-+..
T Consensus 75 ~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 75 FSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 77778899 799999999999999999997754
No 38
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=49.72 E-value=22 Score=27.58 Aligned_cols=46 Identities=22% Similarity=0.399 Sum_probs=31.6
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCEEEEEEecc
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 172 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~ 172 (203)
|+.|+|+++++ .++|+|.+ |...+.| +.. |....++|.|+|+.+..
T Consensus 11 P~gV~V~i~~~-~VtVkGpk------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGN-TVTVKGPK------------------GELTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETT-EEEEEETT------------------EEEEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCC-EEEEECCC------------------eEEEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 47889999986 79999853 3355544 444 44557899988876543
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=48.30 E-value=26 Score=24.50 Aligned_cols=19 Identities=21% Similarity=0.441 Sum_probs=15.2
Q ss_pred CcceEEEEEcCeEEEEEeEE
Q 028798 101 RDELKIEVEENRVLRVSGER 120 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~ 120 (203)
|+.|+|+++++ .++|+|.+
T Consensus 20 P~gV~V~i~~~-~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKGR-TVIVKGPR 38 (100)
T ss_dssp CSSCEEEEETT-EEEEEETT
T ss_pred CCCCEEEEeCC-EEEEECCC
Confidence 57889999986 79999854
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=47.19 E-value=45 Score=26.59 Aligned_cols=46 Identities=11% Similarity=0.305 Sum_probs=31.3
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCEEEEEEecc
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 172 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~ 172 (203)
|+.|+|+++++ .++|+|.+ |...+.| +.. |....++|.|+|+.+..
T Consensus 39 P~gV~V~i~~~-~VtVKGPk------------------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDG-VFKVKGPK------------------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCC-EEEEECCC------------------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 57889999976 79999854 3344444 433 44557889888876544
No 41
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.65 E-value=42 Score=26.12 Aligned_cols=45 Identities=24% Similarity=0.457 Sum_probs=29.4
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCEEEEEEe
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLK 170 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lP 170 (203)
|+.|+|+++++ .++|+|.+ |.-.+.|.-| + ++-.++++.|.|...
T Consensus 14 P~gV~v~i~~~-~V~VkGpk------------------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGY-KVKVKGPK------------------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSS-EEEEECSS------------------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeCC-EEEEEcCC------------------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 47899999876 79999854 3344443212 2 444578898888753
No 42
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=39.07 E-value=22 Score=23.33 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=12.2
Q ss_pred CCeEEEEECCEEEEE
Q 028798 154 DSVQAKLENGVLTLS 168 (203)
Q Consensus 154 ~~i~A~~~dGvL~I~ 168 (203)
..|.|.|+||+|.--
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 459999999999743
No 43
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=35.54 E-value=36 Score=26.40 Aligned_cols=47 Identities=11% Similarity=0.265 Sum_probs=31.4
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCEEEEEEecc
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 172 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~ 172 (203)
|+.|+|+++++ .++|+|.+ |...+.|. +.. ++...++|.|.|+.+..
T Consensus 9 P~gV~v~i~~~-~vtVkGpk------------------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHL-DITVEGDN------------------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETT-EEEEEETT------------------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCC-EEEEECCC------------------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 47889999986 79999854 33444442 333 45557899988876543
No 44
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=34.02 E-value=84 Score=24.21 Aligned_cols=44 Identities=18% Similarity=0.366 Sum_probs=29.9
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCEEEEEEe
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLK 170 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lP 170 (203)
|+.|+|+++++ .++|+|.+ |...+.| +.. +...++++.|.|...
T Consensus 12 P~gV~v~i~~~-~v~VkGpk------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPG-RVKVKGPK------------------GELEVPV--SPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETT-EEEEECSS------------------CEEEEEC--CTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeCC-EEEEEeCC------------------cEEEEEe--CCC-----EEEEEECCEEEEEEC
Confidence 57899999976 79999854 3344443 433 344567998888753
No 45
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=32.64 E-value=1e+02 Score=22.18 Aligned_cols=31 Identities=16% Similarity=0.416 Sum_probs=21.1
Q ss_pred CeEEEEE---CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 155 SVQAKLE---NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 155 ~i~A~~~---dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
+|+..|+ ||+|.|++--....+ ...|.|+..
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg~---~~~i~i~~~ 132 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSGK---EQKITIKAS 132 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCC---EEEEEEECS
T ss_pred EEEEEEEECCCCEEEEEEEECCCCC---EEEEEEecC
Confidence 5666665 999999997554433 466777643
No 46
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=31.13 E-value=25 Score=24.88 Aligned_cols=18 Identities=22% Similarity=0.569 Sum_probs=15.1
Q ss_pred CeEEEEECCEEEEEEecc
Q 028798 155 SVQAKLENGVLTLSLKKL 172 (203)
Q Consensus 155 ~i~A~~~dGvL~I~lPK~ 172 (203)
.+.+.+.+|||+|+++..
T Consensus 29 d~D~e~~~gVLti~f~~~ 46 (106)
T 1ew4_A 29 DIDCEINGGVLTITFENG 46 (106)
T ss_dssp CCEEEEETTEEEEECTTS
T ss_pred CEeeeccCCEEEEEECCC
Confidence 388889999999999733
No 47
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=29.97 E-value=70 Score=23.26 Aligned_cols=16 Identities=31% Similarity=0.565 Sum_probs=14.3
Q ss_pred eEEEEECCEEEEEEec
Q 028798 156 VQAKLENGVLTLSLKK 171 (203)
Q Consensus 156 i~A~~~dGvL~I~lPK 171 (203)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7888999999999984
No 48
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=28.50 E-value=78 Score=22.67 Aligned_cols=31 Identities=10% Similarity=0.233 Sum_probs=23.8
Q ss_pred EEEEEEECCCCcccCCeEEEEECCEEEEEEe
Q 028798 140 KFWRQFKLPDNVDLDSVQAKLENGVLTLSLK 170 (203)
Q Consensus 140 ~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lP 170 (203)
...-.|.||.+++.+.+...+...-|.|.+.
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 3566789999999999999999999999873
No 49
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=28.49 E-value=1.3e+02 Score=25.22 Aligned_cols=48 Identities=17% Similarity=0.305 Sum_probs=30.3
Q ss_pred CCcceEEEEEcCeEEEEEeEEeeeee-ccCC---eEE-------EE--eeeeeEEEEEEECCCC
Q 028798 100 KRDELKIEVEENRVLRVSGERKREEE-KKGD---QWH-------RV--ERSHGKFWRQFKLPDN 150 (203)
Q Consensus 100 ~~edI~V~v~~~~~L~I~g~~~~~~~-~~~~---~~~-------~~--er~~g~F~r~~~LP~~ 150 (203)
+++++.|+ +| .|+|++.+..... ..+. .|. .+ ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v~--dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSVK--KG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEEE--TT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEEE--CC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 66776664 66 7999998753211 0121 222 22 2567999999999985
No 50
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=28.21 E-value=1e+02 Score=25.14 Aligned_cols=43 Identities=14% Similarity=0.229 Sum_probs=26.6
Q ss_pred CCcceEEEEEcCeEEEEEeEEeeeeeccCCeEE-EEeeeeeEEEEEEECCCC
Q 028798 100 KRDELKIEVEENRVLRVSGERKREEEKKGDQWH-RVERSHGKFWRQFKLPDN 150 (203)
Q Consensus 100 ~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~-~~er~~g~F~r~~~LP~~ 150 (203)
.++++.| ++| .|+|++.+.. +.++. .....+|.|+-+++||.+
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~t-----sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDSTS-----GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSSC-----CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecCC-----CCEEEECceEeeEEEEEEEEeCCC
Confidence 3556655 555 5778765421 22222 345567999999999975
No 51
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=27.86 E-value=92 Score=24.84 Aligned_cols=41 Identities=22% Similarity=0.403 Sum_probs=25.0
Q ss_pred EEEEcCeEEEEEeEEeeeeeccCCeEEE--------EeeeeeEEEEEEECCCC
Q 028798 106 IEVEENRVLRVSGERKREEEKKGDQWHR--------VERSHGKFWRQFKLPDN 150 (203)
Q Consensus 106 V~v~~~~~L~I~g~~~~~~~~~~~~~~~--------~er~~g~F~r~~~LP~~ 150 (203)
|.++++ .|+|++.+.. ..+..|.. ....+|.|+-++.||..
T Consensus 49 v~v~~G-~L~i~~~~~~---~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGG-VLIIEARRES---YEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETT-EEEEEEEEEE---ETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECC-EEEEEEEecc---CCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 445676 6999986642 11122221 13457899999999964
No 52
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=27.50 E-value=1.1e+02 Score=21.57 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=26.3
Q ss_pred EEECCCeEEEEEEe-CCCCCcceEEEEEcCeEEEEEeE
Q 028798 83 WKETPEGHFIMLDV-PGVKRDELKIEVEENRVLRVSGE 119 (203)
Q Consensus 83 i~e~~d~y~i~~~L-PG~~~edI~V~v~~~~~L~I~g~ 119 (203)
+.+.++.+.|.+.+ ||.+++.|. .+.++ .|.|+-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~~-~LkV~v~ 43 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHGD-EVKVAIT 43 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECSS-CEEEECC
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccCC-EEEEEEe
Confidence 45678889999888 999999884 46665 5777753
No 53
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=27.03 E-value=65 Score=25.15 Aligned_cols=46 Identities=24% Similarity=0.362 Sum_probs=29.8
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEE--ECCEEEEEEec
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKL--ENGVLTLSLKK 171 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~--~dGvL~I~lPK 171 (203)
|+.|+|+++++ .++|+|.+ |...+.| +. ..++..+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~~-~V~VkGPk------------------G~L~~~~--~~----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAK-VVTVEGPR------------------GKLTRNF--KH----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETT-EEEEEETT------------------EEEEEEC--CC----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCC-EEEEECCC------------------ceEEEEc--cC----CcEEEEEEcCCCEEEEEECC
Confidence 58899999976 79999854 3344433 21 1244456 68888887653
No 54
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=26.48 E-value=66 Score=22.60 Aligned_cols=25 Identities=12% Similarity=0.228 Sum_probs=20.8
Q ss_pred ECCCeEEEEEEeCCCCCcceEEEEE
Q 028798 85 ETPEGHFIMLDVPGVKRDELKIEVE 109 (203)
Q Consensus 85 e~~d~y~i~~~LPG~~~edI~V~v~ 109 (203)
+++..|.|++.||.-.-+.+++.+.
T Consensus 33 ~~~~~Y~itF~~p~~~G~~~ef~v~ 57 (100)
T 3rd4_A 33 EITHYYQVTFRLTTDDRKDLVLNID 57 (100)
T ss_dssp -CCCEEEEEEEESSSSCEEEEEECC
T ss_pred CCceEEEEEEEecCCCCCeEEEEEC
Confidence 5678999999999888888888876
No 55
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=25.79 E-value=45 Score=26.44 Aligned_cols=48 Identities=10% Similarity=0.221 Sum_probs=25.3
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEE---eeeeeEEEEEEECCCC
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRV---ERSHGKFWRQFKLPDN 150 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~---er~~g~F~r~~~LP~~ 150 (203)
++++ .+++++.|+|++.+.....-...++..+ ...+|.|+-+++||..
T Consensus 49 ~~n~--~v~~~G~L~I~~~~~~~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 49 RANS--ALDGNGNLVITARQEADGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp TTTE--EECSSSCEEEEEEECTTSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred ccce--EEecCCEEEEEEEecCCCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 3444 3454235888886643100001112221 2446889999999964
No 56
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=25.41 E-value=2e+02 Score=21.07 Aligned_cols=31 Identities=16% Similarity=0.386 Sum_probs=21.5
Q ss_pred CeEEEEE---CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 155 SVQAKLE---NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 155 ~i~A~~~---dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
.|..+|+ ||+|.|++--....+ ...|.|...
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~---~~~i~I~~~ 115 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGK---EQQIVIQSS 115 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCC---EEEEEEECS
T ss_pred EEEEEEEeccCcEEEEEEEEccCCC---EeEEEEecC
Confidence 4555555 999999997555433 467888754
No 57
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=24.21 E-value=2.1e+02 Score=21.05 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=21.1
Q ss_pred CeEEEEE---CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 155 SVQAKLE---NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 155 ~i~A~~~---dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
.|..+|+ ||+|.|++--....+ ...|.|...
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~---~~~i~I~~~ 115 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGK---SNRITIQNE 115 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCC---EEEEEECCC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCC---EEEEEEEcC
Confidence 4555555 999999997554433 466777754
No 58
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=23.89 E-value=2.1e+02 Score=20.99 Aligned_cols=31 Identities=16% Similarity=0.379 Sum_probs=21.4
Q ss_pred CeEEEEE---CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 155 SVQAKLE---NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 155 ~i~A~~~---dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
+|...|+ ||+|.|++--....+ ...|.|...
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~---~~~i~I~~~ 115 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGK---SESITITND 115 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCC---EEEEEEECC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCc---EeEEEEecC
Confidence 4555555 999999997655433 467888754
No 59
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=21.98 E-value=2.3e+02 Score=22.08 Aligned_cols=31 Identities=16% Similarity=0.416 Sum_probs=21.6
Q ss_pred CeEEEEE---CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 155 SVQAKLE---NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 155 ~i~A~~~---dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
.|..+|+ ||+|.|++--....+ ...|.|...
T Consensus 83 ~IeVtf~iD~nGiL~V~a~d~~tg~---~~~i~I~~~ 116 (219)
T 4e81_A 83 QIEVTFDIDADGILHVSAKDKNSGK---EQKITIKAS 116 (219)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCC---EEEEEECTT
T ss_pred eEEEEEEeCCCCCEeeeeeccccCc---cceEeeecc
Confidence 4666655 999999998655443 567888654
No 60
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=21.93 E-value=1.2e+02 Score=23.56 Aligned_cols=46 Identities=15% Similarity=0.474 Sum_probs=30.3
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEE-EECCEEEEEEec
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAK-LENGVLTLSLKK 171 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~-~~dGvL~I~lPK 171 (203)
|+.|+|+++++ .++|+|.+ |.-.+. |+. . .+.-. .++|.|.|..+.
T Consensus 13 P~gV~v~i~~~-~V~VkGPk------------------G~L~~~--~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSR-IVKVVGPR------------------GTLTKN--LKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETT-EEEEEETT------------------EEEEEE--CTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeCC-EEEEEcCC------------------eEEEEE--ccC-C---cEEEEEecCCeEEEEECC
Confidence 58899999976 79999854 334443 332 1 23334 458999888764
No 61
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=21.85 E-value=26 Score=28.19 Aligned_cols=47 Identities=28% Similarity=0.398 Sum_probs=30.2
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCEEEEEEecc
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 172 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGvL~I~lPK~ 172 (203)
|+.|+|+++++ .++|+|.+ |...+. |+..++.. ..++|.|+|+.+..
T Consensus 54 P~gV~V~i~~~-~VtVKGPk------------------G~L~~~--~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEGQ-DLKVKGPL------------------GELALT--YPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESSS-EEEECCSS------------------CCEEEE--CCSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEeCC-EEEEECCC------------------eEEEEE--cCCCEEEE----EecCCEEEEEcCCC
Confidence 57888999876 79999854 224443 35544330 45788888876644
No 62
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=21.60 E-value=3e+02 Score=21.81 Aligned_cols=20 Identities=20% Similarity=0.420 Sum_probs=13.4
Q ss_pred CCcceEEEEEcCeEEEEEeEEee
Q 028798 100 KRDELKIEVEENRVLRVSGERKR 122 (203)
Q Consensus 100 ~~edI~V~v~~~~~L~I~g~~~~ 122 (203)
+++++ .+++| .|+|++.+..
T Consensus 44 ~~~nv--~v~~G-~L~I~a~~~~ 63 (271)
T 1dyp_A 44 KNENA--TVSKG-KLKLTTKRES 63 (271)
T ss_dssp CGGGE--EEETT-EEEEEEEEEE
T ss_pred CCccE--EEECC-EEEEEEEecc
Confidence 45664 55676 6999987643
No 63
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=21.19 E-value=32 Score=26.57 Aligned_cols=43 Identities=21% Similarity=0.451 Sum_probs=28.7
Q ss_pred CcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCEEEEEE
Q 028798 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSL 169 (203)
Q Consensus 101 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGvL~I~l 169 (203)
|+.|+|+++++ .++|+|.+ |...+.| +.. +...++++.|.|..
T Consensus 11 P~gV~v~i~~~-~V~VkGpk------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKINGQ-VITIKGKN------------------GELTRTL--NDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESSS-EEECCBTT------------------BCCEEEC--CSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeCC-EEEEEcCC------------------EEEEEEC--CCC-----EEEEEeCCEEEEEE
Confidence 57888999876 78999853 2244443 443 44457889888873
No 64
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=21.18 E-value=1.7e+02 Score=22.35 Aligned_cols=31 Identities=16% Similarity=0.381 Sum_probs=21.4
Q ss_pred CeEEEEE---CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 155 SVQAKLE---NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 155 ~i~A~~~---dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
+|..+|+ ||+|.|++--....+ ...|.|...
T Consensus 102 ~IeVtf~iD~nGiL~VsA~d~~tg~---~~~i~I~~~ 135 (182)
T 3n8e_A 102 QIEVTFDIDANGIVHVSAKDKGTGR---EQQIVIQSS 135 (182)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCC---EEEEEESCC
T ss_pred eEEEEEEEecCCEEEEEEEEcCCCC---EeeEEEecC
Confidence 4666655 999999997554433 466888765
No 65
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.00 E-value=1.1e+02 Score=23.90 Aligned_cols=51 Identities=18% Similarity=0.163 Sum_probs=32.3
Q ss_pred CCCCCcceEEEEEcCeEEEEEeEEeeeeeccCCeEEEEeeeeeEEEEEEECCCCcccCCeEEEEECCE---EEEEEecc
Q 028798 97 PGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGV---LTLSLKKL 172 (203)
Q Consensus 97 PG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~F~r~~~LP~~vd~~~i~A~~~dGv---L~I~lPK~ 172 (203)
|=-=|+.|+|+++++ .++|+|.+ |...+. |+.. .|....++|. |.|+.+..
T Consensus 9 pI~IP~gV~V~i~~~-~VtVkGpk------------------G~L~~~--~~~~----~v~i~~~~~~~~~i~v~~~~~ 62 (192)
T 2zkr_e 9 TVDIPENVDITLKGR-TVIVKGPR------------------GTLRRD--FNHI----NVELSLLGKKKKRLRVDKWWG 62 (192)
T ss_dssp -CCCCTTCEEEEETT-EEEEEETT------------------EEEEEE--CCSS----SCEEEEETTTTCEEEEECSCC
T ss_pred cEEcCCCCEEEEeCC-EEEEECCC------------------eEEEEE--eCCC----CEEEEEecCceeEEEEEcCCC
Confidence 334468899999986 79999854 334443 3431 3455678887 77776544
No 66
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=20.89 E-value=54 Score=21.50 Aligned_cols=25 Identities=28% Similarity=0.504 Sum_probs=19.4
Q ss_pred EeCCCCCcceEEEEEcCeEEEEEeEE
Q 028798 95 DVPGVKRDELKIEVEENRVLRVSGER 120 (203)
Q Consensus 95 ~LPG~~~edI~V~v~~~~~L~I~g~~ 120 (203)
.+--|+.+.|.+...-| .|.|+|+.
T Consensus 14 ~V~sFd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 14 KVQSFDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp EEEEECSSEEEEEETTE-EEEEEEEC
T ss_pred CEEEECCCEEEEEeCce-EEEEEcCC
Confidence 34456888999999876 79999975
No 67
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=20.60 E-value=2.1e+02 Score=20.71 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=20.6
Q ss_pred CeEEEEE---CCEEEEEEeccCCCCCCCCeEEEeccC
Q 028798 155 SVQAKLE---NGVLTLSLKKLSPDQIKGPRVVGIAGG 188 (203)
Q Consensus 155 ~i~A~~~---dGvL~I~lPK~~~~~~~~~r~I~I~~~ 188 (203)
.|...|+ ||+|.|++--....+ ...|.|...
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~---~~~i~i~~~ 115 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGN---KNKLTITND 115 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCC---EEEEEECSS
T ss_pred eEEEEEEECCCcEEEEEEEEecCCc---EEEEEeecc
Confidence 5666655 999999996443332 466787654
No 68
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=20.06 E-value=1.2e+02 Score=21.34 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=26.8
Q ss_pred eEEEEEEECCCCc-ccCCeEEEEECCEEEEEEe
Q 028798 139 GKFWRQFKLPDNV-DLDSVQAKLENGVLTLSLK 170 (203)
Q Consensus 139 g~F~r~~~LP~~v-d~~~i~A~~~dGvL~I~lP 170 (203)
....-.|.||.++ +.+.+...++..-|.|.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 3466778999988 8999999999999999874
Done!