RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 028798
         (203 letters)



>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 150

 Score =  115 bits (288), Expect = 2e-33
 Identities = 67/147 (45%), Positives = 97/147 (65%), Gaps = 3/147 (2%)

Query: 43  RSLLSDLWTERLADPFRVLEQIPFELE--RDETMALSPARVDWKETPEGHFIMLDVPGVK 100
           RS + D + +  ADPF     I   +     ET A + AR+DWKETPE H    D+PGVK
Sbjct: 5   RSNVFDPFADLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVK 64

Query: 101 RDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKL 160
           ++E+K+EVE+  VL VSGER +E+E K D+WHRVERS GKF R+F+L ++  ++ V+A L
Sbjct: 65  KEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL 124

Query: 161 ENGVLTLSLKKLSPDQIKGPRVVGIAG 187
           ENGVLT+++ K    + +  + + I+G
Sbjct: 125 ENGVLTVTVPKAEVKKPE-VKAIQISG 150


>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon
           Methanococcus jannaschii [TaxId: 2190]}
          Length = 115

 Score = 82.4 bits (203), Expect = 3e-21
 Identities = 19/98 (19%), Positives = 40/98 (40%)

Query: 81  VDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHGK 140
           +   E  +   ++  +PGV ++++ +    + +   +        +     +       +
Sbjct: 13  ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEE 72

Query: 141 FWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIK 178
            +R  KLP  V  ++  AK ENGVL++ L K      K
Sbjct: 73  IYRTIKLPATVKEENASAKFENGVLSVILPKAESSIKK 110


>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 92

 Score = 33.4 bits (76), Expect = 0.003
 Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 16/95 (16%)

Query: 80  RVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVERSHG 139
           + DW +T     I L +  V+++++ +E  E  +                       S  
Sbjct: 4   KYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELS----------------ALVKLPSGE 47

Query: 140 KFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSP 174
            +  + +L   +  +    K+ +  + + LKK   
Sbjct: 48  DYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEA 82


>d1ejfa_ b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 110

 Score = 26.2 bits (57), Expect = 1.8
 Identities = 12/66 (18%), Positives = 24/66 (36%)

Query: 76  LSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVE 135
           + PA   W +  +  FI   V   K   +  E  +     + G    +   + D +H ++
Sbjct: 1   MQPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCID 60

Query: 136 RSHGKF 141
            +  K 
Sbjct: 61  PNDSKH 66


>d1uwwa_ b.18.1.23 (A:) Endoglucanase (alkaline cellulase) {Bacillus
           sp. 1139 [TaxId: 1411]}
          Length = 184

 Score = 26.0 bits (57), Expect = 2.9
 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)

Query: 98  GVKRDELKIEVEENRVLRVSGERKREEEKKGDQWHRVER 136
           GVK   L IE E N    +S E    E K  D W    R
Sbjct: 30  GVK-TALTIE-EANGSNALSWEFGYPEVKPSDNWATAPR 66


>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4,
           KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
           4932]}
          Length = 433

 Score = 26.2 bits (57), Expect = 3.6
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 16/96 (16%)

Query: 103 ELKIEVEEN-RVLRVSGERKREEEKKGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLE 161
           + K E+EE  R      E ++EEE KG  W R      ++++ F      +  ++  + +
Sbjct: 333 KTKTELEETQR------ELRKEEEAKGISWQR------RWFKDFDYSVTPEEGALVPEKD 380

Query: 162 NGVLTLSLK-KLSPDQIKGPRVVGI--AGGEDEPAK 194
           +  L L+    LS        +VG      ED  + 
Sbjct: 381 DTFLKLASALNLSTKNAPSGTLVGDKEDRKEDLSSI 416


>d2r5fa1 c.124.1.8 (A:59-316) Transcriptional regulator PSPTO2395
           {Pseudomonas syringae [TaxId: 317]}
          Length = 258

 Score = 24.6 bits (53), Expect = 8.9
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 150 NVDLDSVQAKLENGVLTLSLKKLSPDQIKGPRVVGIAGGED 190
           +     V  + E  V+++ L KL        RV+G+AGG  
Sbjct: 194 DAQGKPVLEEDEEFVVSMGLGKLR----SINRVLGLAGGVR 230


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.136    0.396 

Gapped
Lambda     K      H
   0.267   0.0553    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 747,411
Number of extensions: 35068
Number of successful extensions: 74
Number of sequences better than 10.0: 1
Number of HSP's gapped: 74
Number of HSP's successfully gapped: 9
Length of query: 203
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 122
Effective length of database: 1,295,466
Effective search space: 158046852
Effective search space used: 158046852
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.8 bits)