Query 028802
Match_columns 203
No_of_seqs 283 out of 1420
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 03:46:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 2.5E-31 8.7E-36 200.3 20.6 150 1-153 170-320 (321)
2 2ynn_A Coatomer subunit beta'; 100.0 8E-31 2.7E-35 196.0 22.1 154 1-157 19-175 (304)
3 3ow8_A WD repeat-containing pr 100.0 2.3E-30 7.7E-35 195.1 20.7 156 1-159 128-284 (321)
4 4gqb_B Methylosome protein 50; 100.0 5.4E-30 1.8E-34 194.8 20.5 156 1-158 133-293 (344)
5 1vyh_C Platelet-activating fac 100.0 3.4E-30 1.2E-34 200.1 19.2 155 1-158 114-269 (410)
6 4ery_A WD repeat-containing pr 100.0 1.9E-29 6.6E-34 188.7 21.8 154 1-157 29-183 (312)
7 2ynn_A Coatomer subunit beta'; 100.0 2.3E-29 7.7E-34 188.1 21.5 156 1-158 103-263 (304)
8 3frx_A Guanine nucleotide-bind 100.0 2.3E-29 7.7E-34 189.4 21.5 154 1-158 71-231 (319)
9 1got_B GT-beta; complex (GTP-b 100.0 2.6E-29 8.8E-34 190.6 19.9 149 1-151 190-340 (340)
10 1vyh_C Platelet-activating fac 100.0 9.2E-29 3.1E-33 192.0 21.1 155 1-158 198-373 (410)
11 2hes_X YDR267CP; beta-propelle 100.0 7.1E-29 2.4E-33 187.5 19.8 153 1-155 64-231 (330)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.9E-29 3.1E-33 188.0 20.5 152 1-154 67-225 (345)
13 4ery_A WD repeat-containing pr 100.0 1.7E-28 5.7E-33 183.6 21.6 156 1-158 71-227 (312)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 6E-29 2.1E-33 188.9 19.2 153 1-155 22-182 (345)
15 4h5i_A Guanine nucleotide-exch 100.0 6.6E-29 2.3E-33 190.2 19.4 152 1-156 139-345 (365)
16 1got_B GT-beta; complex (GTP-b 100.0 3.3E-28 1.1E-32 184.5 21.2 155 1-158 61-219 (340)
17 1erj_A Transcriptional repress 100.0 4.3E-28 1.5E-32 187.2 21.5 152 1-156 129-289 (393)
18 4gqb_B Methylosome protein 50; 100.0 3.7E-28 1.3E-32 184.7 19.3 155 1-158 88-250 (344)
19 2pbi_B Guanine nucleotide-bind 100.0 1.2E-27 4E-32 182.5 21.8 155 1-157 160-318 (354)
20 2xzm_R RACK1; ribosome, transl 100.0 1.1E-27 3.9E-32 181.7 21.5 149 1-154 82-244 (343)
21 4g56_B MGC81050 protein; prote 100.0 5.2E-28 1.8E-32 184.7 18.9 156 1-159 145-306 (357)
22 3iz6_a 40S ribosomal protein R 100.0 4.3E-28 1.5E-32 186.5 18.5 152 2-156 212-377 (380)
23 2pbi_B Guanine nucleotide-bind 100.0 1E-27 3.4E-32 182.9 20.1 148 2-151 203-354 (354)
24 2pm7_B Protein transport prote 100.0 1.7E-27 5.8E-32 177.4 19.9 154 1-156 15-191 (297)
25 1nr0_A Actin interacting prote 100.0 1.6E-27 5.5E-32 193.6 21.4 154 1-157 153-358 (611)
26 2ymu_A WD-40 repeat protein; u 100.0 1.4E-27 4.6E-32 192.0 19.6 145 1-151 432-577 (577)
27 2pm7_B Protein transport prote 100.0 5.5E-27 1.9E-31 174.6 20.7 153 1-155 59-239 (297)
28 2hes_X YDR267CP; beta-propelle 100.0 3.5E-27 1.2E-31 178.2 19.9 150 2-155 21-185 (330)
29 1nr0_A Actin interacting prote 100.0 3.7E-27 1.3E-31 191.5 21.0 154 1-157 65-273 (611)
30 3iz6_a 40S ribosomal protein R 100.0 5E-27 1.7E-31 180.5 20.1 156 1-157 163-332 (380)
31 1erj_A Transcriptional repress 100.0 4.7E-27 1.6E-31 181.4 19.4 153 1-155 212-390 (393)
32 4g56_B MGC81050 protein; prote 100.0 2.4E-27 8.3E-32 181.0 17.5 152 1-156 187-345 (357)
33 3dm0_A Maltose-binding peripla 100.0 4.4E-27 1.5E-31 193.4 19.8 155 1-158 436-596 (694)
34 3dwl_C Actin-related protein 2 100.0 5.5E-28 1.9E-32 185.0 13.5 153 1-155 17-178 (377)
35 3vl1_A 26S proteasome regulato 100.0 3.8E-27 1.3E-31 182.6 18.0 155 1-157 145-325 (420)
36 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-26 4.4E-31 174.3 20.4 155 1-157 63-340 (351)
37 3frx_A Guanine nucleotide-bind 100.0 1.5E-26 5.2E-31 173.9 20.0 153 1-157 23-188 (319)
38 2w18_A PALB2, fancn, partner a 100.0 8.8E-27 3E-31 174.2 18.1 148 2-152 185-355 (356)
39 3vl1_A 26S proteasome regulato 100.0 6.3E-27 2.2E-31 181.3 17.8 154 2-157 104-281 (420)
40 2aq5_A Coronin-1A; WD40 repeat 100.0 6E-27 2E-31 181.1 17.4 155 1-157 87-257 (402)
41 3f3f_A Nucleoporin SEH1; struc 100.0 2.1E-26 7.2E-31 173.2 19.6 155 1-157 17-252 (351)
42 3dwl_C Actin-related protein 2 99.9 2.3E-27 7.7E-32 181.6 13.1 155 1-157 61-239 (377)
43 2ymu_A WD-40 repeat protein; u 99.9 3E-26 1E-30 184.2 19.7 147 1-153 391-538 (577)
44 3bg1_A Protein SEC13 homolog; 99.9 5E-27 1.7E-31 176.4 14.1 153 1-155 19-199 (316)
45 2xzm_R RACK1; ribosome, transl 99.9 1.3E-25 4.4E-30 170.4 21.4 147 4-154 35-203 (343)
46 4e54_B DNA damage-binding prot 99.9 3E-26 1E-30 179.1 18.2 155 1-159 125-287 (435)
47 3mkq_A Coatomer beta'-subunit; 99.9 4.9E-26 1.7E-30 189.5 20.4 154 1-157 19-175 (814)
48 1sq9_A Antiviral protein SKI8; 99.9 8.2E-26 2.8E-30 173.8 19.8 152 1-155 192-396 (397)
49 2pm9_A Protein WEB1, protein t 99.9 5.8E-26 2E-30 175.5 18.5 157 1-159 171-342 (416)
50 3jrp_A Fusion protein of prote 99.9 8.3E-26 2.8E-30 172.3 18.9 154 1-156 17-193 (379)
51 4e54_B DNA damage-binding prot 99.9 2.5E-26 8.5E-31 179.5 16.3 153 1-157 170-330 (435)
52 3sfz_A APAF-1, apoptotic pepti 99.9 8.7E-26 3E-30 195.6 21.3 154 1-157 621-777 (1249)
53 3ei3_B DNA damage-binding prot 99.9 1.3E-25 4.6E-30 172.2 19.7 152 1-156 79-238 (383)
54 3bg1_A Protein SEC13 homolog; 99.9 2E-26 6.9E-31 173.0 14.6 153 1-155 63-248 (316)
55 1gxr_A ESG1, transducin-like e 99.9 1.3E-25 4.3E-30 168.7 19.0 155 1-158 57-218 (337)
56 4aez_A CDC20, WD repeat-contai 99.9 2E-25 6.8E-30 172.6 20.6 154 1-158 140-297 (401)
57 4ggc_A P55CDC, cell division c 99.9 4.9E-25 1.7E-29 164.5 21.8 154 1-156 73-317 (318)
58 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.3E-25 4.5E-30 176.1 19.1 155 1-158 108-275 (450)
59 1r5m_A SIR4-interacting protei 99.9 8.5E-26 2.9E-30 174.5 17.7 150 1-153 253-424 (425)
60 2j04_B YDR362CP, TAU91; beta p 99.9 1.8E-26 6E-31 184.1 14.1 151 1-155 272-429 (524)
61 3ei3_B DNA damage-binding prot 99.9 3.6E-25 1.2E-29 169.8 20.9 152 1-158 124-286 (383)
62 2xyi_A Probable histone-bindin 99.9 1.6E-25 5.3E-30 174.8 19.1 156 1-158 237-414 (430)
63 1k8k_C P40, ARP2/3 complex 41 99.9 2.9E-25 9.8E-30 169.1 20.1 152 1-155 14-174 (372)
64 1gxr_A ESG1, transducin-like e 99.9 4.6E-25 1.6E-29 165.7 20.9 153 1-157 103-258 (337)
65 3zwl_B Eukaryotic translation 99.9 3.8E-25 1.3E-29 167.9 20.5 155 1-159 181-351 (369)
66 4aow_A Guanine nucleotide-bind 99.9 5.9E-25 2E-29 165.5 20.8 150 2-156 178-339 (340)
67 1k8k_C P40, ARP2/3 complex 41 99.9 3.5E-25 1.2E-29 168.7 19.8 156 1-158 58-237 (372)
68 3jrp_A Fusion protein of prote 99.9 5.4E-25 1.8E-29 167.8 20.8 154 1-156 61-242 (379)
69 3dw8_B Serine/threonine-protei 99.9 1.4E-25 4.7E-30 175.0 17.6 154 1-157 34-261 (447)
70 2aq5_A Coronin-1A; WD40 repeat 99.9 1.7E-25 5.7E-30 173.0 17.8 155 2-158 41-211 (402)
71 2oaj_A Protein SNI1; WD40 repe 99.9 7E-26 2.4E-30 190.9 17.0 149 1-152 441-659 (902)
72 3lrv_A PRE-mRNA-splicing facto 99.9 8.8E-25 3E-29 165.7 20.5 152 1-158 82-248 (343)
73 3i2n_A WD repeat-containing pr 99.9 4.5E-25 1.5E-29 167.1 18.9 151 2-156 175-355 (357)
74 3lrv_A PRE-mRNA-splicing facto 99.9 4.6E-25 1.6E-29 167.2 18.1 154 1-156 131-294 (343)
75 2j04_B YDR362CP, TAU91; beta p 99.9 1.3E-25 4.5E-30 179.0 15.7 155 1-157 213-389 (524)
76 3zwl_B Eukaryotic translation 99.9 1.3E-24 4.4E-29 165.0 20.5 155 1-158 80-253 (369)
77 3k26_A Polycomb protein EED; W 99.9 1.3E-25 4.6E-30 170.4 14.9 152 1-157 75-263 (366)
78 3mmy_A MRNA export factor; mRN 99.9 8.4E-25 2.9E-29 166.0 18.9 110 1-113 45-162 (368)
79 3k26_A Polycomb protein EED; W 99.9 6.5E-25 2.2E-29 166.6 18.1 154 1-157 24-195 (366)
80 4a11_B DNA excision repair pro 99.9 2.5E-24 8.7E-29 165.5 21.1 152 6-159 155-370 (408)
81 3v7d_B Cell division control p 99.9 2.7E-24 9.2E-29 168.8 21.6 154 1-158 168-345 (464)
82 3mkq_A Coatomer beta'-subunit; 99.9 7.4E-25 2.5E-29 182.4 18.5 156 1-157 61-220 (814)
83 3odt_A Protein DOA1; ubiquitin 99.9 3.9E-24 1.3E-28 159.1 20.6 150 2-159 149-301 (313)
84 4aez_A CDC20, WD repeat-contai 99.9 1.1E-24 3.9E-29 168.4 18.2 154 1-158 223-384 (401)
85 3dw8_B Serine/threonine-protei 99.9 9.5E-25 3.2E-29 170.3 17.8 154 1-157 99-319 (447)
86 3dm0_A Maltose-binding peripla 99.9 2.3E-24 7.8E-29 177.3 20.8 155 1-158 388-554 (694)
87 4gga_A P55CDC, cell division c 99.9 2.2E-24 7.5E-29 167.7 19.3 153 1-157 236-398 (420)
88 2xyi_A Probable histone-bindin 99.9 2.4E-24 8.3E-29 168.1 19.4 153 1-155 187-354 (430)
89 3gre_A Serine/threonine-protei 99.9 5.4E-25 1.8E-29 171.6 15.5 156 1-158 69-249 (437)
90 2oaj_A Protein SNI1; WD40 repe 99.9 1E-24 3.5E-29 183.9 18.0 152 1-157 64-245 (902)
91 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-24 3.7E-29 172.4 16.8 147 1-157 91-257 (588)
92 2pm9_A Protein WEB1, protein t 99.9 1.6E-24 5.5E-29 167.4 16.5 154 1-155 73-250 (416)
93 3i2n_A WD repeat-containing pr 99.9 2.1E-24 7E-29 163.4 16.0 153 2-158 124-295 (357)
94 3gre_A Serine/threonine-protei 99.9 1.8E-24 6.1E-29 168.6 16.1 154 3-159 178-364 (437)
95 3jro_A Fusion protein of prote 99.9 6.3E-24 2.2E-28 176.2 20.0 154 1-156 59-240 (753)
96 1r5m_A SIR4-interacting protei 99.9 4.1E-24 1.4E-28 165.1 17.7 151 1-156 212-363 (425)
97 1pgu_A Actin interacting prote 99.9 9.6E-24 3.3E-28 170.4 20.4 157 1-159 24-243 (615)
98 3jro_A Fusion protein of prote 99.9 2.7E-24 9.4E-29 178.4 17.4 154 1-156 15-191 (753)
99 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.8E-24 2.7E-28 166.0 19.0 149 1-152 155-337 (450)
100 3vu4_A KMHSV2; beta-propeller 99.9 1.5E-23 5E-28 159.9 19.8 152 2-156 65-273 (355)
101 1sq9_A Antiviral protein SKI8; 99.9 3.4E-24 1.2E-28 164.7 16.3 155 1-158 68-271 (397)
102 4aow_A Guanine nucleotide-bind 99.9 2E-23 6.8E-28 157.1 19.9 156 1-158 92-250 (340)
103 1pgu_A Actin interacting prote 99.9 6E-24 2.1E-28 171.6 18.1 145 7-154 456-614 (615)
104 3mmy_A MRNA export factor; mRN 99.9 3.7E-24 1.3E-28 162.4 15.4 151 1-155 92-347 (368)
105 4ggc_A P55CDC, cell division c 99.9 5.8E-23 2E-27 153.2 21.3 152 1-158 31-185 (318)
106 4a11_B DNA excision repair pro 99.9 1.3E-23 4.5E-28 161.6 17.9 152 1-156 49-220 (408)
107 4gq1_A NUP37; propeller, trans 99.9 6.9E-24 2.4E-28 163.8 16.3 154 3-159 97-291 (393)
108 3v7d_B Cell division control p 99.9 5.5E-23 1.9E-27 161.4 20.5 151 2-159 275-426 (464)
109 1yfq_A Cell cycle arrest prote 99.9 1.8E-23 6.2E-28 157.6 16.1 147 1-154 17-179 (342)
110 3odt_A Protein DOA1; ubiquitin 99.9 1.2E-22 4.1E-27 151.1 19.8 149 1-156 24-176 (313)
111 1yfq_A Cell cycle arrest prote 99.9 1.7E-23 5.7E-28 157.8 15.3 153 1-158 107-286 (342)
112 3sfz_A APAF-1, apoptotic pepti 99.9 8.1E-23 2.8E-27 177.1 20.5 154 1-157 663-874 (1249)
113 4gga_A P55CDC, cell division c 99.9 1.5E-22 5.2E-27 157.4 20.1 154 1-158 153-314 (420)
114 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.6E-22 8.9E-27 157.0 20.1 148 2-158 124-272 (445)
115 1p22_A F-BOX/WD-repeat protein 99.9 3.3E-22 1.1E-26 156.0 19.9 148 2-158 138-289 (435)
116 2j04_A TAU60, YPL007P, hypothe 99.9 9.7E-23 3.3E-27 161.3 16.7 145 1-153 135-296 (588)
117 4gq1_A NUP37; propeller, trans 99.9 4E-23 1.4E-27 159.5 14.0 151 6-158 155-352 (393)
118 3vu4_A KMHSV2; beta-propeller 99.9 2.4E-22 8.2E-27 153.2 17.5 149 8-157 148-339 (355)
119 1p22_A F-BOX/WD-repeat protein 99.9 1.9E-22 6.6E-27 157.4 16.2 145 5-158 264-418 (435)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3E-21 1E-25 151.0 21.1 144 6-158 168-312 (445)
121 2oit_A Nucleoporin 214KDA; NH2 99.9 8E-22 2.7E-26 154.1 15.8 153 1-156 98-280 (434)
122 2w18_A PALB2, fancn, partner a 99.9 3.3E-21 1.1E-25 144.2 18.2 141 15-160 155-320 (356)
123 2oit_A Nucleoporin 214KDA; NH2 99.9 2.8E-22 9.5E-27 156.7 12.2 150 1-153 42-222 (434)
124 3bws_A Protein LP49; two-domai 99.9 4.7E-21 1.6E-25 149.0 18.5 153 1-157 128-295 (433)
125 1l0q_A Surface layer protein; 99.9 1.1E-20 3.7E-25 145.1 20.1 152 1-158 37-193 (391)
126 1l0q_A Surface layer protein; 99.9 2.8E-20 9.7E-25 142.8 20.4 151 1-157 121-278 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.3E-19 4.6E-24 140.8 19.4 151 1-157 184-347 (415)
128 3bws_A Protein LP49; two-domai 99.8 1.6E-19 5.3E-24 140.4 18.0 153 1-158 175-338 (433)
129 4h5i_A Guanine nucleotide-exch 99.8 3.6E-20 1.2E-24 141.7 12.7 110 1-112 225-344 (365)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.2E-18 4E-23 135.5 17.8 149 1-156 228-389 (415)
131 2ecf_A Dipeptidyl peptidase IV 99.8 8.8E-19 3E-23 144.8 15.9 141 1-145 42-230 (741)
132 1xfd_A DIP, dipeptidyl aminope 99.8 7.4E-19 2.5E-23 144.9 12.1 140 1-144 22-193 (723)
133 2ojh_A Uncharacterized protein 99.8 9.1E-18 3.1E-22 123.3 16.2 153 1-157 90-261 (297)
134 1nir_A Nitrite reductase; hemo 99.8 3.1E-17 1E-21 131.6 20.2 151 2-156 144-313 (543)
135 3vgz_A Uncharacterized protein 99.8 8.9E-17 3.1E-21 121.4 20.5 156 1-158 94-266 (353)
136 1pby_B Quinohemoprotein amine 99.8 3E-17 1E-21 123.0 17.0 150 1-158 87-314 (337)
137 2ojh_A Uncharacterized protein 99.8 2.3E-17 7.8E-22 121.2 15.5 149 1-153 47-203 (297)
138 3vgz_A Uncharacterized protein 99.8 7.8E-17 2.7E-21 121.7 18.4 154 1-158 146-307 (353)
139 1nir_A Nitrite reductase; hemo 99.8 4.3E-17 1.5E-21 130.7 17.8 153 1-158 184-359 (543)
140 1ri6_A Putative isomerase YBHE 99.8 1E-16 3.5E-21 120.4 17.6 151 1-154 43-209 (343)
141 3u4y_A Uncharacterized protein 99.7 1.1E-16 3.8E-21 120.1 17.2 153 1-157 89-255 (331)
142 3u4y_A Uncharacterized protein 99.7 3.4E-16 1.2E-20 117.4 19.1 148 2-154 4-160 (331)
143 1xfd_A DIP, dipeptidyl aminope 99.7 2.2E-17 7.6E-22 136.1 12.3 153 1-157 66-292 (723)
144 2ecf_A Dipeptidyl peptidase IV 99.7 5.6E-17 1.9E-21 134.1 14.6 151 1-157 114-324 (741)
145 1k32_A Tricorn protease; prote 99.7 7E-17 2.4E-21 138.3 14.9 149 1-156 301-463 (1045)
146 1z68_A Fibroblast activation p 99.7 4.2E-17 1.4E-21 134.5 12.8 139 1-144 21-189 (719)
147 1ri6_A Putative isomerase YBHE 99.7 9.3E-16 3.2E-20 115.1 18.1 151 1-153 134-307 (343)
148 3hfq_A Uncharacterized protein 99.7 4.9E-16 1.7E-20 117.5 16.5 153 1-154 45-218 (347)
149 1k32_A Tricorn protease; prote 99.7 5.3E-16 1.8E-20 132.9 17.4 149 1-155 343-503 (1045)
150 1jmx_B Amine dehydrogenase; ox 99.7 3E-16 1E-20 118.2 14.1 148 1-158 97-329 (349)
151 3o4h_A Acylamino-acid-releasin 99.7 1.8E-16 6.1E-21 127.9 13.4 143 2-152 116-274 (582)
152 3scy_A Hypothetical bacterial 99.7 2.3E-15 7.9E-20 114.4 18.8 150 1-153 160-336 (361)
153 2z3z_A Dipeptidyl aminopeptida 99.7 3.6E-16 1.2E-20 128.7 15.3 149 1-155 87-294 (706)
154 3hfq_A Uncharacterized protein 99.7 3.1E-15 1.1E-19 113.1 19.3 154 1-156 146-321 (347)
155 1jmx_B Amine dehydrogenase; ox 99.7 9.6E-16 3.3E-20 115.4 16.0 152 1-158 5-179 (349)
156 3o4h_A Acylamino-acid-releasin 99.7 5.3E-16 1.8E-20 125.2 14.5 151 1-158 27-231 (582)
157 1pby_B Quinohemoprotein amine 99.7 1.8E-15 6.1E-20 113.3 15.9 145 8-158 2-167 (337)
158 1z68_A Fibroblast activation p 99.7 1.3E-16 4.6E-21 131.5 10.0 153 1-158 65-295 (719)
159 4a5s_A Dipeptidyl peptidase 4 99.7 1E-15 3.4E-20 127.0 15.1 136 1-143 22-190 (740)
160 2z3z_A Dipeptidyl aminopeptida 99.7 3.2E-15 1.1E-19 123.0 17.6 154 1-156 186-393 (706)
161 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.5E-15 1.2E-19 113.9 14.5 151 1-153 45-223 (365)
162 1jof_A Carboxy-CIS,CIS-muconat 99.6 6.6E-14 2.3E-18 106.8 19.4 153 1-153 88-290 (365)
163 3scy_A Hypothetical bacterial 99.6 9.9E-14 3.4E-18 105.4 20.3 153 1-155 55-243 (361)
164 3pe7_A Oligogalacturonate lyas 99.6 3.1E-14 1E-18 109.0 17.0 151 2-156 42-227 (388)
165 4a5s_A Dipeptidyl peptidase 4 99.6 9.3E-15 3.2E-19 121.2 14.6 150 2-156 68-296 (740)
166 3azo_A Aminopeptidase; POP fam 99.6 7.3E-15 2.5E-19 120.1 13.2 152 1-155 135-326 (662)
167 1q7f_A NHL, brain tumor CG1071 99.6 4E-13 1.4E-17 98.9 19.6 150 1-156 126-282 (286)
168 3pe7_A Oligogalacturonate lyas 99.6 1.4E-13 4.8E-18 105.3 17.5 153 1-157 86-276 (388)
169 3azo_A Aminopeptidase; POP fam 99.6 7.1E-14 2.4E-18 114.3 16.2 150 4-156 87-276 (662)
170 3fvz_A Peptidyl-glycine alpha- 99.6 7.9E-13 2.7E-17 99.5 19.3 154 1-156 29-229 (329)
171 2xdw_A Prolyl endopeptidase; a 99.5 2.9E-13 1E-17 111.7 15.4 153 1-156 130-322 (710)
172 3c5m_A Oligogalacturonate lyas 99.5 8.7E-14 3E-18 106.5 10.1 151 2-156 87-275 (396)
173 2oiz_A Aromatic amine dehydrog 99.5 1.9E-12 6.7E-17 98.7 17.2 64 88-155 261-335 (361)
174 3fvz_A Peptidyl-glycine alpha- 99.5 1.1E-12 3.7E-17 98.8 15.2 151 1-154 148-322 (329)
175 2dg1_A DRP35, lactonase; beta 99.5 5.7E-12 1.9E-16 94.6 17.9 150 1-154 50-213 (333)
176 1xip_A Nucleoporin NUP159; bet 99.5 6.4E-13 2.2E-17 101.8 12.2 139 1-156 43-193 (388)
177 2xdw_A Prolyl endopeptidase; a 99.5 9.4E-12 3.2E-16 102.7 20.1 155 1-156 176-370 (710)
178 3c5m_A Oligogalacturonate lyas 99.4 6.5E-13 2.2E-17 101.6 10.9 152 1-156 41-227 (396)
179 2bkl_A Prolyl endopeptidase; m 99.4 9.6E-13 3.3E-17 108.4 12.2 150 1-156 126-306 (695)
180 1qks_A Cytochrome CD1 nitrite 99.4 2.7E-11 9.2E-16 97.5 20.2 150 5-157 165-376 (567)
181 3no2_A Uncharacterized protein 99.4 6.8E-12 2.3E-16 92.3 15.3 145 5-156 3-156 (276)
182 1q7f_A NHL, brain tumor CG1071 99.4 3.5E-11 1.2E-15 88.4 19.1 148 2-154 83-238 (286)
183 3no2_A Uncharacterized protein 99.4 8.9E-12 3E-16 91.7 15.5 148 2-157 43-198 (276)
184 3e5z_A Putative gluconolactona 99.4 1.4E-11 4.9E-16 91.0 16.7 147 1-153 33-201 (296)
185 2gop_A Trilobed protease; beta 99.4 5.2E-12 1.8E-16 95.2 14.1 140 1-154 109-291 (347)
186 1rwi_B Serine/threonine-protei 99.4 1.9E-11 6.4E-16 89.0 16.1 153 1-156 113-266 (270)
187 2gop_A Trilobed protease; beta 99.4 1.2E-11 4.2E-16 93.1 14.9 139 1-151 64-250 (347)
188 3dsm_A Uncharacterized protein 99.4 4.1E-11 1.4E-15 90.2 17.5 150 1-157 89-256 (328)
189 2oiz_A Aromatic amine dehydrog 99.4 2.6E-11 8.7E-16 92.5 16.1 143 5-154 13-182 (361)
190 1rwi_B Serine/threonine-protei 99.4 8.7E-11 3E-15 85.4 17.6 152 1-156 72-224 (270)
191 2mad_H Methylamine dehydrogena 99.4 1.6E-10 5.3E-15 88.6 19.1 155 1-159 71-355 (373)
192 2dg1_A DRP35, lactonase; beta 99.3 3.5E-11 1.2E-15 90.2 14.6 150 1-155 11-172 (333)
193 1yr2_A Prolyl oligopeptidase; 99.3 1.6E-11 5.4E-16 101.9 13.7 151 1-155 168-351 (741)
194 3e5z_A Putative gluconolactona 99.3 2.1E-10 7.3E-15 84.7 17.7 149 1-158 120-290 (296)
195 2bkl_A Prolyl endopeptidase; m 99.3 1.4E-10 4.9E-15 95.5 18.0 148 1-153 173-348 (695)
196 1xip_A Nucleoporin NUP159; bet 99.3 3.5E-11 1.2E-15 92.2 13.0 128 1-142 93-232 (388)
197 2z2n_A Virginiamycin B lyase; 99.2 2.8E-09 9.5E-14 78.3 19.7 149 1-155 62-213 (299)
198 1qks_A Cytochrome CD1 nitrite 99.2 2.6E-09 8.9E-14 86.0 20.9 152 1-154 202-421 (567)
199 3sjl_D Methylamine dehydrogena 99.2 6.3E-10 2.1E-14 85.1 16.3 144 3-154 40-208 (386)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 5.5E-10 1.9E-14 82.8 15.6 150 1-154 122-299 (314)
201 3dsm_A Uncharacterized protein 99.2 9.8E-10 3.4E-14 82.6 17.0 144 7-157 54-215 (328)
202 1yr2_A Prolyl oligopeptidase; 99.2 1.3E-09 4.5E-14 90.5 19.1 149 1-153 214-392 (741)
203 2z2n_A Virginiamycin B lyase; 99.2 4.2E-09 1.4E-13 77.3 19.7 147 1-153 104-254 (299)
204 3hrp_A Uncharacterized protein 99.2 1.5E-09 5.3E-14 84.1 17.0 150 1-154 136-298 (409)
205 2hz6_A Endoplasmic reticulum t 99.2 4.5E-12 1.5E-16 97.0 2.0 144 6-158 8-153 (369)
206 3iuj_A Prolyl endopeptidase; h 99.2 7.8E-10 2.7E-14 91.2 14.5 151 2-157 135-317 (693)
207 2mad_H Methylamine dehydrogena 99.1 1.1E-08 3.8E-13 78.3 18.9 142 4-156 29-197 (373)
208 3dr2_A Exported gluconolactona 99.1 3.5E-09 1.2E-13 78.6 15.4 145 2-154 51-224 (305)
209 2qc5_A Streptogramin B lactona 99.1 2.3E-08 8E-13 73.3 19.7 147 1-153 25-175 (300)
210 3g4e_A Regucalcin; six bladed 99.1 3.1E-09 1.1E-13 78.7 14.6 138 1-142 103-260 (297)
211 2qc5_A Streptogramin B lactona 99.1 2.9E-08 1E-12 72.8 19.5 147 1-153 67-217 (300)
212 3iuj_A Prolyl endopeptidase; h 99.1 7.2E-09 2.5E-13 85.5 17.8 151 1-156 180-361 (693)
213 3hrp_A Uncharacterized protein 99.1 9.2E-09 3.1E-13 79.7 17.0 151 1-156 176-356 (409)
214 1mda_H Methylamine dehydrogena 99.1 6.4E-10 2.2E-14 84.8 9.8 158 1-160 70-352 (368)
215 3c75_H MADH, methylamine dehyd 99.1 1.3E-08 4.5E-13 78.9 17.3 157 1-159 182-407 (426)
216 3g4e_A Regucalcin; six bladed 99.1 3.9E-08 1.3E-12 72.7 19.2 152 1-157 59-232 (297)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 5E-08 1.7E-12 72.2 17.6 150 1-156 76-258 (314)
218 2iwa_A Glutamine cyclotransfer 99.0 7.6E-08 2.6E-12 70.0 17.0 153 1-160 26-187 (266)
219 2ghs_A AGR_C_1268P; regucalcin 99.0 2E-07 7E-12 69.8 19.0 146 1-154 95-260 (326)
220 3c75_H MADH, methylamine dehyd 98.9 4.7E-08 1.6E-12 75.9 15.4 113 5-121 82-219 (426)
221 3dr2_A Exported gluconolactona 98.9 3.2E-08 1.1E-12 73.4 14.1 143 1-151 136-303 (305)
222 3sjl_D Methylamine dehydrogena 98.9 2.1E-08 7.2E-13 76.7 12.8 151 1-156 83-258 (386)
223 2ghs_A AGR_C_1268P; regucalcin 98.9 1.8E-07 6.2E-12 70.1 17.4 136 1-142 139-290 (326)
224 1yiq_A Quinohemoprotein alcoho 98.9 9.3E-08 3.2E-12 78.8 16.5 154 2-158 241-509 (689)
225 2hz6_A Endoplasmic reticulum t 98.9 1E-10 3.6E-15 89.4 -1.7 144 4-157 46-195 (369)
226 2qe8_A Uncharacterized protein 98.9 2.6E-07 8.9E-12 69.7 17.0 149 1-151 22-223 (343)
227 2ece_A 462AA long hypothetical 98.9 1.8E-07 6.2E-12 72.5 16.0 149 2-153 144-351 (462)
228 2ece_A 462AA long hypothetical 98.9 2.5E-07 8.6E-12 71.7 16.5 145 5-152 93-287 (462)
229 3nol_A Glutamine cyclotransfer 98.9 2.5E-07 8.5E-12 66.7 15.4 151 2-159 49-206 (262)
230 3nok_A Glutaminyl cyclase; bet 98.8 3.1E-07 1E-11 66.3 14.9 146 7-159 65-215 (268)
231 1kb0_A Quinohemoprotein alcoho 98.8 1.7E-07 5.7E-12 77.2 15.4 154 2-159 249-512 (677)
232 2qe8_A Uncharacterized protein 98.8 1.7E-07 5.7E-12 70.8 13.1 146 1-147 125-314 (343)
233 1npe_A Nidogen, entactin; glyc 98.8 5.7E-06 2E-10 60.0 20.9 151 1-155 41-199 (267)
234 2iwa_A Glutamine cyclotransfer 98.8 1.2E-06 4E-11 63.7 16.3 147 5-156 73-239 (266)
235 1fwx_A Nitrous oxide reductase 98.7 4.8E-07 1.7E-11 72.4 15.1 144 5-154 145-361 (595)
236 3mbr_X Glutamine cyclotransfer 98.7 2.6E-06 9.1E-11 60.8 17.5 152 2-160 27-185 (243)
237 1kb0_A Quinohemoprotein alcoho 98.7 7.6E-07 2.6E-11 73.3 15.9 144 8-154 328-567 (677)
238 3tc9_A Hypothetical hydrolase; 98.7 3.3E-06 1.1E-10 65.8 18.4 148 1-153 142-300 (430)
239 1fwx_A Nitrous oxide reductase 98.7 1.6E-06 5.6E-11 69.4 16.0 146 5-155 99-309 (595)
240 1yiq_A Quinohemoprotein alcoho 98.6 2.5E-06 8.4E-11 70.4 14.9 131 9-141 321-536 (689)
241 2fp8_A Strictosidine synthase; 98.6 8.1E-06 2.8E-10 60.9 16.5 149 1-154 24-216 (322)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.6 1.2E-05 4.2E-10 61.0 17.8 146 6-158 52-211 (376)
243 2xe4_A Oligopeptidase B; hydro 98.5 2.8E-06 9.5E-11 70.8 14.6 150 2-154 180-354 (751)
244 1npe_A Nidogen, entactin; glyc 98.5 4.6E-05 1.6E-09 55.1 19.5 151 1-157 84-241 (267)
245 1kv9_A Type II quinohemoprotei 98.5 5.2E-06 1.8E-10 68.3 15.2 153 2-158 236-492 (668)
246 1mda_H Methylamine dehydrogena 98.5 1E-06 3.4E-11 67.2 9.4 125 18-154 47-194 (368)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.5 2.3E-05 7.8E-10 59.6 16.9 136 7-151 239-375 (376)
248 3nol_A Glutamine cyclotransfer 98.5 2E-05 6.9E-10 56.8 15.5 134 5-143 94-244 (262)
249 3hxj_A Pyrrolo-quinoline quino 98.4 6.6E-06 2.3E-10 61.1 13.2 136 7-153 107-243 (330)
250 3nok_A Glutaminyl cyclase; bet 98.4 4E-05 1.4E-09 55.4 16.4 134 5-142 103-253 (268)
251 3mbr_X Glutamine cyclotransfer 98.4 9.9E-05 3.4E-09 52.7 17.5 133 6-142 73-222 (243)
252 3hxj_A Pyrrolo-quinoline quino 98.3 1.2E-05 4.1E-10 59.7 12.8 141 4-156 185-326 (330)
253 4hw6_A Hypothetical protein, I 98.3 8E-05 2.7E-09 58.1 17.7 147 1-153 144-303 (433)
254 3qqz_A Putative uncharacterize 98.3 0.00019 6.5E-09 51.8 18.2 153 1-155 32-205 (255)
255 2p9w_A MAL S 1 allergenic prot 98.3 6.3E-05 2.2E-09 56.1 15.9 151 2-154 19-215 (334)
256 1ijq_A LDL receptor, low-densi 98.3 0.00041 1.4E-08 51.6 20.5 150 1-154 35-195 (316)
257 2ad6_A Methanol dehydrogenase 98.3 5E-05 1.7E-09 61.3 16.5 136 18-158 273-498 (571)
258 2fp8_A Strictosidine synthase; 98.3 5E-05 1.7E-09 56.5 15.4 134 17-155 165-314 (322)
259 3kya_A Putative phosphatase; s 98.3 0.00013 4.4E-09 57.6 17.9 150 1-152 144-339 (496)
260 2ad6_A Methanol dehydrogenase 98.3 4.2E-05 1.4E-09 61.8 14.8 128 9-139 318-522 (571)
261 2p4o_A Hypothetical protein; p 98.2 0.00037 1.3E-08 51.5 18.5 148 1-154 37-198 (306)
262 3v64_C Agrin; beta propeller, 98.2 0.00057 2E-08 51.6 19.7 151 1-155 78-235 (349)
263 3qqz_A Putative uncharacterize 98.2 0.00038 1.3E-08 50.2 17.5 150 1-152 75-251 (255)
264 1flg_A Protein (quinoprotein e 98.2 9.3E-05 3.2E-09 59.9 15.5 56 101-158 465-520 (582)
265 2xe4_A Oligopeptidase B; hydro 98.2 0.00025 8.5E-09 59.1 18.3 149 1-152 226-398 (751)
266 3p5b_L Low density lipoprotein 98.2 0.001 3.6E-08 51.2 20.6 151 1-155 117-278 (400)
267 3v65_B Low-density lipoprotein 98.2 0.00043 1.5E-08 53.1 18.2 152 1-155 121-278 (386)
268 1w6s_A Methanol dehydrogenase 98.1 0.00022 7.5E-09 57.9 16.4 56 101-158 452-507 (599)
269 1flg_A Protein (quinoprotein e 98.1 9.2E-05 3.1E-09 59.9 14.0 81 58-141 465-547 (582)
270 1kv9_A Type II quinohemoprotei 98.1 0.00016 5.4E-09 59.5 14.7 150 6-158 116-337 (668)
271 3amr_A 3-phytase; beta-propell 98.0 0.0019 6.4E-08 48.7 18.7 143 6-153 39-209 (355)
272 1w6s_A Methanol dehydrogenase 98.0 0.00039 1.3E-08 56.4 15.3 130 8-140 324-533 (599)
273 3sov_A LRP-6, low-density lipo 98.0 0.0026 8.8E-08 47.4 18.6 149 2-154 41-197 (318)
274 3kya_A Putative phosphatase; s 98.0 0.001 3.4E-08 52.6 16.7 156 1-159 252-480 (496)
275 3v64_C Agrin; beta propeller, 98.0 0.003 1E-07 47.7 19.6 151 2-156 122-277 (349)
276 3v65_B Low-density lipoprotein 97.9 0.002 7E-08 49.3 18.1 151 2-156 165-320 (386)
277 4hw6_A Hypothetical protein, I 97.9 0.0013 4.3E-08 51.3 16.9 150 1-153 233-432 (433)
278 2p4o_A Hypothetical protein; p 97.9 0.0022 7.7E-08 47.2 17.6 130 9-144 130-278 (306)
279 3m0c_C LDL receptor, low-densi 97.9 0.0048 1.6E-07 51.8 20.3 151 2-155 430-590 (791)
280 3sov_A LRP-6, low-density lipo 97.8 0.0055 1.9E-07 45.6 20.2 152 2-157 85-241 (318)
281 3tc9_A Hypothetical hydrolase; 97.8 0.0033 1.1E-07 48.9 16.7 151 1-153 231-429 (430)
282 1ijq_A LDL receptor, low-densi 97.8 0.0063 2.2E-07 45.2 20.7 151 2-156 83-240 (316)
283 3p5b_L Low density lipoprotein 97.7 0.0088 3E-07 46.0 20.3 152 2-156 165-322 (400)
284 1n7d_A LDL receptor, low-densi 97.7 0.00018 6.2E-09 59.5 9.4 151 1-154 411-571 (699)
285 3amr_A 3-phytase; beta-propell 97.7 0.0083 2.8E-07 45.2 16.9 135 16-153 98-262 (355)
286 3m0c_C LDL receptor, low-densi 97.6 0.023 7.8E-07 47.7 20.0 152 1-156 476-634 (791)
287 3pbp_A Nucleoporin NUP82; beta 97.5 0.018 6.3E-07 44.5 17.5 134 16-151 40-209 (452)
288 3sre_A PON1, serum paraoxonase 97.5 0.017 5.7E-07 43.8 19.1 148 2-153 56-251 (355)
289 2ism_A Putative oxidoreductase 97.5 0.0026 8.9E-08 48.1 12.5 137 1-142 36-221 (352)
290 3s94_A LRP-6, low-density lipo 97.5 0.03 1E-06 45.7 20.6 152 1-156 45-204 (619)
291 1k3i_A Galactose oxidase precu 97.5 0.0036 1.2E-07 51.3 13.7 66 3-68 250-323 (656)
292 2p9w_A MAL S 1 allergenic prot 97.5 0.011 3.8E-07 44.1 15.0 148 4-154 74-265 (334)
293 3das_A Putative oxidoreductase 97.5 0.0098 3.3E-07 44.9 14.9 139 1-141 37-219 (347)
294 3s25_A Hypothetical 7-bladed b 97.4 0.019 6.5E-07 42.4 16.1 139 3-156 60-218 (302)
295 1tl2_A L10, protein (tachylect 97.4 0.0047 1.6E-07 43.4 11.9 147 1-157 46-211 (236)
296 4a2l_A BT_4663, two-component 97.4 0.035 1.2E-06 46.5 19.3 144 6-156 367-528 (795)
297 3a9g_A Putative uncharacterize 97.4 0.0079 2.7E-07 45.5 14.0 136 1-141 34-215 (354)
298 4a0p_A LRP6, LRP-6, low-densit 97.4 0.041 1.4E-06 44.9 20.5 150 1-155 42-198 (628)
299 1n7d_A LDL receptor, low-densi 97.4 0.0012 4.1E-08 54.6 9.8 153 2-157 459-617 (699)
300 4a2l_A BT_4663, two-component 97.3 0.045 1.6E-06 45.8 19.0 141 5-155 415-572 (795)
301 1cru_A Protein (soluble quinop 97.3 0.016 5.3E-07 45.5 14.8 99 1-99 32-162 (454)
302 4a0p_A LRP6, LRP-6, low-densit 97.2 0.063 2.2E-06 43.9 19.5 150 2-157 86-240 (628)
303 2xbg_A YCF48-like protein; pho 97.1 0.05 1.7E-06 40.5 16.8 144 2-152 169-320 (327)
304 2vpj_A Kelch-like protein 12; 97.1 0.04 1.4E-06 40.2 14.8 143 6-155 112-279 (301)
305 3pbp_A Nucleoporin NUP82; beta 97.1 0.0073 2.5E-07 46.7 10.6 105 2-108 72-209 (452)
306 1k3i_A Galactose oxidase precu 97.1 0.012 4.3E-07 48.1 12.8 114 42-155 190-324 (656)
307 2g8s_A Glucose/sorbosone dehyd 97.0 0.018 6.1E-07 43.5 12.4 137 1-140 23-214 (353)
308 2xn4_A Kelch-like protein 2; s 97.0 0.054 1.9E-06 39.5 14.7 144 6-155 108-277 (302)
309 3v9f_A Two-component system se 97.0 0.12 4.3E-06 43.1 18.0 142 6-155 417-569 (781)
310 3ii7_A Kelch-like protein 7; p 96.9 0.066 2.2E-06 39.2 14.2 144 6-155 55-226 (306)
311 3s94_A LRP-6, low-density lipo 96.8 0.15 5.2E-06 41.6 20.2 151 2-155 355-511 (619)
312 2be1_A Serine/threonine-protei 96.8 0.0079 2.7E-07 45.2 8.8 144 7-151 10-181 (339)
313 3ii7_A Kelch-like protein 7; p 96.8 0.067 2.3E-06 39.1 13.6 143 6-155 101-273 (306)
314 2vpj_A Kelch-like protein 12; 96.8 0.092 3.2E-06 38.2 14.7 145 6-156 62-233 (301)
315 4asc_A Kelch repeat and BTB do 96.7 0.061 2.1E-06 39.6 13.0 144 6-155 98-278 (315)
316 1tl2_A L10, protein (tachylect 96.6 0.018 6.2E-07 40.5 8.8 135 8-149 5-158 (236)
317 1zgk_A Kelch-like ECH-associat 96.6 0.12 4.1E-06 37.9 14.0 144 6-155 121-288 (308)
318 3sbq_A Nitrous-oxide reductase 96.5 0.019 6.6E-07 45.9 9.3 101 39-142 324-453 (638)
319 2woz_A Kelch repeat and BTB do 96.5 0.15 5E-06 37.6 13.7 146 6-155 109-288 (318)
320 2xn4_A Kelch-like protein 2; s 96.5 0.15 5.3E-06 37.1 14.4 144 6-155 61-230 (302)
321 2xbg_A YCF48-like protein; pho 96.4 0.19 6.5E-06 37.3 17.4 109 35-147 160-272 (327)
322 3v9f_A Two-component system se 96.4 0.35 1.2E-05 40.4 16.9 140 10-155 376-525 (781)
323 3a9g_A Putative uncharacterize 96.3 0.2 6.9E-06 37.7 13.9 102 37-142 28-153 (354)
324 2ism_A Putative oxidoreductase 96.3 0.17 6E-06 38.0 13.5 115 37-154 30-178 (352)
325 4asc_A Kelch repeat and BTB do 96.3 0.2 7E-06 36.7 13.7 144 6-155 45-222 (315)
326 1zgk_A Kelch-like ECH-associat 96.3 0.17 5.7E-06 37.1 13.1 144 6-155 70-241 (308)
327 3s25_A Hypothetical 7-bladed b 96.1 0.27 9.2E-06 36.2 14.2 137 3-156 21-178 (302)
328 2uvk_A YJHT; unknown function, 95.8 0.38 1.3E-05 35.8 13.2 137 17-157 168-345 (357)
329 2woz_A Kelch repeat and BTB do 95.8 0.38 1.3E-05 35.3 13.8 144 6-155 56-232 (318)
330 2xzh_A Clathrin heavy chain 1; 95.4 0.6 2E-05 35.0 16.3 148 4-153 160-331 (365)
331 2zwa_A Leucine carboxyl methyl 95.3 0.77 2.6E-05 38.0 14.2 147 6-156 451-637 (695)
332 3ei3_A DNA damage-binding prot 95.0 1.7 5.9E-05 38.3 18.2 130 18-153 493-635 (1158)
333 2xzh_A Clathrin heavy chain 1; 94.8 0.92 3.1E-05 34.0 18.4 144 3-155 74-237 (365)
334 3das_A Putative oxidoreductase 94.3 1.2 4.2E-05 33.5 12.6 109 33-142 27-158 (347)
335 1bpo_A Protein (clathrin); cla 94.3 1.5 5E-05 34.3 18.3 148 4-153 159-330 (494)
336 2zwa_A Leucine carboxyl methyl 94.2 2 7E-05 35.5 15.1 148 6-156 397-579 (695)
337 2uvk_A YJHT; unknown function, 94.2 1.3 4.3E-05 33.0 12.0 48 59-109 168-224 (357)
338 3sre_A PON1, serum paraoxonase 94.1 1.4 4.9E-05 33.2 16.3 130 16-152 138-296 (355)
339 1xi4_A Clathrin heavy chain; a 93.7 1.3 4.6E-05 39.8 12.4 138 17-158 125-293 (1630)
340 3ei3_A DNA damage-binding prot 93.5 3.8 0.00013 36.2 15.9 141 9-151 897-1059(1158)
341 1cru_A Protein (soluble quinop 93.5 2.2 7.4E-05 33.3 14.3 104 38-142 27-162 (454)
342 1bpo_A Protein (clathrin); cla 93.3 2.3 8E-05 33.2 17.8 144 3-155 73-236 (494)
343 2be1_A Serine/threonine-protei 92.9 0.28 9.7E-06 36.8 6.4 107 50-158 11-134 (339)
344 1xi4_A Clathrin heavy chain; a 91.8 2.7 9.4E-05 37.9 11.7 146 3-155 73-236 (1630)
345 3sbq_A Nitrous-oxide reductase 91.2 2.3 7.8E-05 34.4 9.8 70 84-155 325-409 (638)
346 2g8s_A Glucose/sorbosone dehyd 90.9 3.9 0.00013 30.6 15.7 57 91-147 288-347 (353)
347 2wg3_C Hedgehog-interacting pr 90.1 4.7 0.00016 31.6 10.9 48 1-48 19-79 (463)
348 3zwu_A Alkaline phosphatase PH 88.2 2.3 7.9E-05 34.5 8.0 57 85-141 479-548 (592)
349 3zwu_A Alkaline phosphatase PH 84.9 2.9 9.8E-05 33.9 6.9 55 1-55 481-548 (592)
350 4gq2_M Nucleoporin NUP120; bet 84.7 7.6 0.00026 33.5 9.8 35 84-118 238-273 (950)
351 4a9v_A PHOX; hydrolase, beta-p 84.0 7.1 0.00024 31.6 8.7 59 84-142 478-549 (592)
352 3no0_A DNA gyrase subunit A; D 83.5 10 0.00036 27.3 16.2 118 37-157 67-199 (276)
353 4a9v_A PHOX; hydrolase, beta-p 83.1 3.9 0.00013 33.0 6.9 57 1-57 481-550 (592)
354 2wg3_C Hedgehog-interacting pr 82.9 15 0.00052 28.7 13.7 30 38-67 14-44 (463)
355 3qhy_B Beta-lactamase inhibito 82.4 12 0.0004 27.0 11.6 127 16-155 119-247 (282)
356 4gq2_M Nucleoporin NUP120; bet 80.5 2.5 8.6E-05 36.4 5.3 34 125-158 237-270 (950)
357 3ott_A Two-component system se 80.5 23 0.0008 29.3 17.9 137 10-155 115-261 (758)
358 4fhn_B Nucleoporin NUP120; pro 79.1 7.6 0.00026 34.2 7.9 31 88-118 245-275 (1139)
359 4fhn_B Nucleoporin NUP120; pro 77.1 3.4 0.00012 36.3 5.2 32 3-34 245-276 (1139)
360 3uc1_A DNA gyrase subunit A; D 74.9 23 0.0008 26.2 19.5 149 6-157 108-282 (327)
361 1suu_A DNA gyrase subunit A; t 73.7 24 0.00082 25.9 19.8 147 4-155 5-182 (312)
362 3qhy_B Beta-lactamase inhibito 72.6 24 0.00082 25.4 12.0 88 16-110 41-128 (282)
363 3f7f_A Nucleoporin NUP120; nuc 68.3 7.1 0.00024 32.5 4.8 30 5-34 229-258 (729)
364 3f7f_A Nucleoporin NUP120; nuc 67.4 11 0.00039 31.3 5.8 32 89-120 228-259 (729)
365 3no0_A DNA gyrase subunit A; D 66.7 33 0.0011 24.7 18.6 147 6-157 79-249 (276)
366 3ott_A Two-component system se 60.1 73 0.0025 26.4 18.1 142 5-155 481-627 (758)
367 1q47_A Semaphorin 3A; beta pro 56.2 53 0.0018 26.0 7.6 57 93-149 422-487 (495)
368 3b7f_A Glycosyl hydrolase, BNR 51.1 74 0.0025 23.7 15.8 49 8-59 23-77 (394)
369 1zvt_A Topoisomerase IV subuni 50.5 64 0.0022 22.8 15.7 146 8-156 3-165 (256)
370 3al9_A Plexin-A2; beta-propell 50.4 34 0.0012 27.4 5.8 57 93-149 414-476 (539)
371 3uc1_A DNA gyrase subunit A; D 49.3 77 0.0026 23.4 15.7 119 37-157 94-231 (327)
372 1q47_A Semaphorin 3A; beta pro 48.7 68 0.0023 25.4 7.1 55 9-63 423-487 (495)
373 3l6v_A GYRA, DNA gyrase subuni 42.5 1.1E+02 0.0037 23.1 20.0 153 2-155 2-181 (370)
374 3nvq_A Semaphorin-7A; beta-pro 41.0 1.2E+02 0.0042 24.6 7.6 56 9-64 382-445 (590)
375 3ol2_B Plexin-B1; beta-propell 39.6 76 0.0026 25.4 6.1 56 94-149 402-461 (528)
376 3nvq_A Semaphorin-7A; beta-pro 38.8 1.5E+02 0.0052 24.1 7.8 57 93-149 381-444 (590)
377 4gz8_A Semaphorin-3A; multi-do 38.4 1.6E+02 0.0054 24.4 7.9 57 93-149 430-495 (667)
378 4hvt_A Ritya.17583.B, post-pro 36.9 1.8E+02 0.0062 24.2 14.0 148 3-156 137-331 (711)
379 1suu_A DNA gyrase subunit A; t 36.4 1.2E+02 0.0042 22.1 18.5 117 38-156 100-233 (312)
380 4gz8_A Semaphorin-3A; multi-do 35.9 1.2E+02 0.0042 25.0 7.0 55 9-63 431-495 (667)
381 3al9_A Plexin-A2; beta-propell 32.0 78 0.0027 25.3 5.2 55 9-63 415-476 (539)
382 3kci_A Probable E3 ubiquitin-p 31.2 1.6E+02 0.0056 22.0 17.8 144 10-154 65-241 (389)
383 3b7f_A Glycosyl hydrolase, BNR 31.2 1.6E+02 0.0055 21.8 14.6 108 39-150 116-258 (394)
384 3mez_B Mannose-specific lectin 31.0 89 0.003 18.8 7.4 9 100-108 65-73 (113)
385 1zi0_A DNA gyrase subunit A; b 30.7 1.5E+02 0.0053 21.5 19.9 148 5-155 1-177 (307)
386 1zi0_A DNA gyrase subunit A; b 28.8 1.7E+02 0.0057 21.3 19.4 147 6-156 108-279 (307)
387 3oky_A Plexin-A2; transmembran 26.7 1.6E+02 0.0056 24.4 6.2 57 93-149 413-475 (681)
388 1zvt_A Topoisomerase IV subuni 25.4 1.8E+02 0.0062 20.5 11.9 104 51-156 4-116 (256)
389 3oky_B Putative uncharacterize 25.2 2.7E+02 0.0094 22.5 7.4 26 125-150 471-496 (565)
390 3l6v_A GYRA, DNA gyrase subuni 21.7 2.6E+02 0.0089 21.0 20.6 145 7-155 113-317 (370)
391 1olz_A Semaphorin 4D; developm 20.8 3.6E+02 0.012 22.3 7.5 56 94-149 417-477 (663)
392 1b2p_A Protein (lectin); manno 20.4 1.5E+02 0.0053 17.9 11.1 9 15-23 38-46 (119)
393 3oky_B Putative uncharacterize 20.3 3.5E+02 0.012 21.9 7.7 28 37-64 469-496 (565)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-31 Score=200.27 Aligned_cols=150 Identities=12% Similarity=0.238 Sum_probs=141.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+|++++|++++.|+.|++||+.. ......+.+ |
T Consensus 170 ~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~-h 247 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSG-H 247 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCEEEEECC-C
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999975 566778888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
...|.++ |+|++.+|++++.|+.|++||+.+++++..+..|.. .|.+++|+|++++|++++.|+.|++||+.
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD-QVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC-cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999 999999999999999999999999999999999965 89999999999999999999999999973
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8e-31 Score=196.01 Aligned_cols=154 Identities=16% Similarity=0.243 Sum_probs=141.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+|+|++++|++++.||+|++||+.++..+..+..|..+|.+++|+|++++|++++.|+.|++||+.+ +..+..+.+ |
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~-~~~~~~~~~-h 96 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT-GEKVVDFEA-H 96 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC-CcEEEEEeC-C
Confidence 57999999999999999999999999999999999999999999999999999999999999999975 577788899 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC-ceeeeeccCCCcceEEEEEeC-CCCeEEEEeCCCcEEEEeCCCccc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
...|.++ |+|++++|++++.|+.|++||++++ .....+.+|.. .|.+++|+| ++.+|++++.|+.|++||+++..+
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS-CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC-cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc
Confidence 9999999 9999999999999999999999987 45567888855 899999999 678999999999999999976543
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=195.09 Aligned_cols=156 Identities=15% Similarity=0.286 Sum_probs=145.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.++.|++|++.+++....+..+...|.+++|+|++++|++++.|+.|++||+.+ +..+..+.+ |
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~-h 205 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHTLEG-H 205 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECC-C
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEcc-c
Confidence 47999999999999999999999999988888888889999999999999999999999999999975 567788888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
...+.++ |+|++++|++++.|+.|++||++++..+..+.+|.. .|.+++|+|++++|++++.|+.|++||+.++.+..
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS-WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 9999999 999999999999999999999999999999999965 89999999999999999999999999998876543
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=5.4e-30 Score=194.80 Aligned_cols=156 Identities=19% Similarity=0.200 Sum_probs=133.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCC-CEEEEecCCCeEEEEEcCCccccceeeec-
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~- 78 (203)
|+|+|+|++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++++.|+.|++||++. ++....+..
T Consensus 133 v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~ 211 (344)
T 4gqb_B 133 VSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCS 211 (344)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SSCEEECC--
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc-cceeeeeecc
Confidence 5799999999999999999999999999999999999999999999988 5789999999999999985 355544432
Q ss_pred CCCCceeEE-EeeC-CCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCC-CeEEEEeCCCcEEEEeCCCc
Q 028802 79 LSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR-KFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 79 ~~~~~v~~~-~~~~-~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~ 155 (203)
.+...+.++ |+|+ +.++++|+.||.|++||+++++++..+.+|.. .|++++|+|++ ++|++++.|++|+|||+.++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ-CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS-CEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 044567788 8884 57888999999999999999999999999965 89999999998 57999999999999999887
Q ss_pred ccC
Q 028802 156 LKG 158 (203)
Q Consensus 156 ~~~ 158 (203)
+..
T Consensus 291 ~~~ 293 (344)
T 4gqb_B 291 ELF 293 (344)
T ss_dssp EEE
T ss_pred cEE
Confidence 643
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=3.4e-30 Score=200.10 Aligned_cols=155 Identities=14% Similarity=0.270 Sum_probs=145.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|+|++.+|++++.|+.|++||+.. ..++..+.+ |
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~-~~~~~~~~~-h 191 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG-FECIRTMHG-H 191 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS-SCEEECCCC-C
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeEEEcC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999974 577788888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
...|.++ |+|++.+|++++.|+.|++||++++.++..+.+|.. .|.++.|+|++.+|++++.|+.|++||+++....
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE-WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 9999999 999999999999999999999999999999999965 8999999999999999999999999999887543
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.9e-29 Score=188.72 Aligned_cols=154 Identities=15% Similarity=0.285 Sum_probs=144.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+.. +..+..+.. |
T Consensus 29 ~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~-~ 106 (312)
T 4ery_A 29 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTLKG-H 106 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC-CcEEEEEcC-C
Confidence 47999999999999999999999999989899999999999999999999999999999999999975 567788888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
...+.++ |+|+++++++++.|+.|++||+++++.+..+..|.. +|.+++|+|++++|++++.|+.|++||++++..
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC-cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 9999999 999999999999999999999999999999998855 899999999999999999999999999987654
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=2.3e-29 Score=188.13 Aligned_cols=156 Identities=18% Similarity=0.181 Sum_probs=136.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC-eEEEeecCCcccEEEEEEee-CCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN-TVQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
|+|+|++++|++|+.|++|++||+.++ .....+.+|...|.+++|+| ++..|++++.|+.|++||+............
T Consensus 103 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 182 (304)
T 2ynn_A 103 IAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG 182 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECC
T ss_pred EEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccC
Confidence 479999999999999999999999876 56678889999999999999 6789999999999999999754333333334
Q ss_pred CCCCceeEE-Eee--CCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 79 LSPNSVDAL-LKL--DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 79 ~~~~~v~~~-~~~--~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
+...+..+ |+| ++.+|++++.|+.|++||+++++++..+.+|.. .|.+++|+|++++|++++.|+.|++||+.++
T Consensus 183 -~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 183 -QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS-NVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp -CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred -CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC-CEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 55677777 755 788999999999999999999999999999965 8999999999999999999999999999887
Q ss_pred ccC
Q 028802 156 LKG 158 (203)
Q Consensus 156 ~~~ 158 (203)
...
T Consensus 261 ~~~ 263 (304)
T 2ynn_A 261 KVE 263 (304)
T ss_dssp CEE
T ss_pred cee
Confidence 654
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=2.3e-29 Score=189.37 Aligned_cols=154 Identities=19% Similarity=0.290 Sum_probs=141.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+. +..+..+.+ |
T Consensus 71 ~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--~~~~~~~~~-h 147 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--GQCLATLLG-H 147 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT--SCEEEEECC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEec-c
Confidence 4689999999999999999999999999999999999999999999999999999999999999996 466777888 9
Q ss_pred CCceeEE-EeeC------CCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 81 PNSVDAL-LKLD------EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 81 ~~~v~~~-~~~~------~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
...+.++ +.|. +..+++++.|+.|++||+++++....+.+|.. .|.+++|+|++++|++++.|+.|++||+.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS-NINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS-CEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 9999999 8774 45899999999999999999998888999965 89999999999999999999999999998
Q ss_pred CcccC
Q 028802 154 DILKG 158 (203)
Q Consensus 154 ~~~~~ 158 (203)
+....
T Consensus 227 ~~~~~ 231 (319)
T 3frx_A 227 AKKAM 231 (319)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 87643
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=2.6e-29 Score=190.56 Aligned_cols=149 Identities=15% Similarity=0.249 Sum_probs=134.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-C
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-L 79 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~ 79 (203)
++|+|++++|++|+.|+.|++||+.++..+..+.+|...|.+++|+|++.+|++++.|+.|++||++.. ..+..+.. .
T Consensus 190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~ 268 (340)
T 1got_B 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD-QELMTYSHDN 268 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC-cEEEEEccCC
Confidence 478999999999999999999999999999999999999999999999999999999999999999753 44444432 0
Q ss_pred CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
+...+.++ |+|++.++++|+.|+.|++||+.+++.+..+.+|.. +|.+++|+|++.+|++++.|+.|++||
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN-RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC-cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 23468888 999999999999999999999999999999999965 899999999999999999999999997
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=9.2e-29 Score=192.04 Aligned_cols=155 Identities=15% Similarity=0.240 Sum_probs=143.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++|+.|++|++||+.++.++..+.+|...|.++.|+|++.+|++++.|+.|++||+.. ......+.. |
T Consensus 198 v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~-~~~~~~~~~-h 275 (410)
T 1vyh_C 198 VSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKAELRE-H 275 (410)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECC-C
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC-CceeeEecC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999975 567777888 9
Q ss_pred CCceeEE-EeeC--------------------CCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEE
Q 028802 81 PNSVDAL-LKLD--------------------EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLG 139 (203)
Q Consensus 81 ~~~v~~~-~~~~--------------------~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (203)
...+.++ |+|+ +.++++|+.|+.|++||++++.++..+.+|.. .|.+++|+|++++|+
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~-~v~~v~~~~~g~~l~ 354 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN-WVRGVLFHSGGKFIL 354 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECSSSSCEE
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC-cEEEEEEcCCCCEEE
Confidence 9999999 8886 67899999999999999999999999999965 899999999999999
Q ss_pred EEeCCCcEEEEeCCCcccC
Q 028802 140 SISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 140 ~~~~d~~i~iwd~~~~~~~ 158 (203)
+++.|+.|++||+.++...
T Consensus 355 s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 355 SCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp EEETTTEEEEECCTTSCCC
T ss_pred EEeCCCeEEEEECCCCceE
Confidence 9999999999999876543
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.1e-29 Score=187.46 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=130.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCC-------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcc---
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--- 70 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~--- 70 (203)
|+|+|++++|++|+.|++|++|++.. ...+..+.+|...|.+++|+|++++|++++.|+.|++||+...+
T Consensus 64 v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe
Confidence 57999999999999999999999853 35667888999999999999999999999999999999995322
Q ss_pred ccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC--ceeeeeccCCCcceEEEEEeCC--CCeEEEEeCCC
Q 028802 71 DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN--RIIQPIAEHSEYPIESLALSHD--RKFLGSISHDS 145 (203)
Q Consensus 71 ~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~--~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~ 145 (203)
.++..+.. |...|.++ |+|++.+|++++.|+.|++|++.++ +++..+.+|.. .|.+++|+|+ +.+|++++.|+
T Consensus 144 ~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 144 ECISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG-TVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EEEEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECCSSSSCEEEEEETTS
T ss_pred EEEEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC-cEEEEEecCCCCeeEEEEEeCCC
Confidence 34566778 99999999 9999999999999999999999876 57788889965 8999999998 67899999999
Q ss_pred cEEEEeCCCc
Q 028802 146 MLKLWDLDDI 155 (203)
Q Consensus 146 ~i~iwd~~~~ 155 (203)
.|++|++.+.
T Consensus 222 ~v~iw~~~~~ 231 (330)
T 2hes_X 222 TVRVWKYMGD 231 (330)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEecCC
Confidence 9999999765
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=8.9e-29 Score=187.98 Aligned_cols=152 Identities=17% Similarity=0.206 Sum_probs=135.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC--eEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcc--ccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~ 76 (203)
|+|+|++++|++|+.|++|++|++..+ ..+..+.+|...|.+++|+|++++|++++.|+.|++||+.... ..+..+
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 579999999999999999999999876 4567889999999999999999999999999999999997532 234567
Q ss_pred ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc--eeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
.. |...+.++ |+|++.+|++++.|+.|++|+++++. +...+.+|.. .|.+++|+|++++|++++.|+.|++|++.
T Consensus 147 ~~-h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~-~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 147 NS-HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHES-TVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp CC-CCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cC-cCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCC-ceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 77 88999999 99999999999999999999998875 4467888855 89999999999999999999999999974
Q ss_pred C
Q 028802 154 D 154 (203)
Q Consensus 154 ~ 154 (203)
.
T Consensus 225 ~ 225 (345)
T 3fm0_A 225 L 225 (345)
T ss_dssp C
T ss_pred c
Confidence 4
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.7e-28 Score=183.64 Aligned_cols=156 Identities=17% Similarity=0.283 Sum_probs=142.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. +..+..+.. |
T Consensus 71 ~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~-~ 148 (312)
T 4ery_A 71 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTLPA-H 148 (312)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-CCEEEEECC-C
T ss_pred EEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CEEEEEecC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999975 566777888 8
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
...+.++ |+|++.++++++.|+.|++||+++++.+..+..+....+..++|+|++++|++++.|+.|++||++++...
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 9999999 99999999999999999999999998887765443447999999999999999999999999999887643
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=6e-29 Score=188.94 Aligned_cols=153 Identities=14% Similarity=0.213 Sum_probs=134.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEE---eecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcc-ccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT---RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-DCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~---~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~ 76 (203)
|+|+|+|++|++|+.|++|+||++.++.... ...+|...|.+++|+|++++|++++.|+.+++|++.... ..+..+
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 5799999999999999999999998875432 236899999999999999999999999999999987432 346678
Q ss_pred ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc---eeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeC
Q 028802 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR---IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (203)
.+ |...|.++ |+|++++|++++.|+.|++||+.++. ++..+..|.. .|.+++|+|++.+|++++.|+.|++|++
T Consensus 102 ~~-h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 102 EG-HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ-DVKHVVWHPSQELLASASYDDTVKLYRE 179 (345)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS-CEEEEEECSSSSCEEEEETTSCEEEEEE
T ss_pred cC-CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC-CeEEEEECCCCCEEEEEeCCCcEEEEEe
Confidence 88 99999999 99999999999999999999998763 4566778855 8999999999999999999999999998
Q ss_pred CCc
Q 028802 153 DDI 155 (203)
Q Consensus 153 ~~~ 155 (203)
++.
T Consensus 180 ~~~ 182 (345)
T 3fm0_A 180 EED 182 (345)
T ss_dssp ETT
T ss_pred cCC
Confidence 765
No 15
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=6.6e-29 Score=190.18 Aligned_cols=152 Identities=13% Similarity=0.140 Sum_probs=120.7
Q ss_pred CcccccCCEEEEE--cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc------
Q 028802 1 MTFAADAMKLLGT--SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC------ 72 (203)
Q Consensus 1 l~~sp~~~~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~------ 72 (203)
++|||||++|+++ +.|++|+|||+.+++.+..+. |...|.+++|+|+|++|++++.++ +.+|+.......
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~ 216 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDF 216 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCC
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecC
Confidence 4799999987654 478999999999998887775 556788888888888888877554 444433221000
Q ss_pred ---------------------------------------------ceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEE
Q 028802 73 ---------------------------------------------SDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISL 106 (203)
Q Consensus 73 ---------------------------------------------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v 106 (203)
...+.. |...|.++ |+|+|++|++|+.|+.|+|
T Consensus 217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 011234 56678899 9999999999999999999
Q ss_pred EEccCCceeeee-ccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 107 VGILPNRIIQPI-AEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 107 ~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
||+++++++..+ .+|.. +|++++|+|||++||+++.|++|+||++....
T Consensus 296 wd~~~~~~~~~~~~gH~~-~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 296 VKLKDLSMSKIFKQAHSF-AITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EETTTTEEEEEETTSSSS-CEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EECCCCcEEEEecCcccC-CEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 999999998875 68855 89999999999999999999999999996543
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=3.3e-28 Score=184.51 Aligned_cols=155 Identities=20% Similarity=0.296 Sum_probs=139.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcc---ccceeee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK---DCSDRFV 77 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~ 77 (203)
|+|+|++++|++|+.|++|++||+.++..+..+..|...|.+++|+|++++|++++.|+.+++|++.... .....+.
T Consensus 61 ~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~ 140 (340)
T 1got_B 61 MHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA 140 (340)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec
Confidence 4799999999999999999999999999889999999999999999999999999999999999997532 2345677
Q ss_pred cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 78 GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
+ |...+.++ |++++. +++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|++++|++++.|+.|++||++++.
T Consensus 141 ~-h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 141 G-HTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp C-CSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred C-CCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 8 89999999 887765 88999999999999999999999999965 89999999999999999999999999998875
Q ss_pred cC
Q 028802 157 KG 158 (203)
Q Consensus 157 ~~ 158 (203)
..
T Consensus 218 ~~ 219 (340)
T 1got_B 218 CR 219 (340)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=4.3e-28 Score=187.23 Aligned_cols=152 Identities=19% Similarity=0.307 Sum_probs=133.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+.. +.....+. +
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~--~ 205 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT-GQCSLTLS--I 205 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEE--C
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC-CeeEEEEE--c
Confidence 47999999999999999999999999999999999999999999999999999999999999999975 44444454 4
Q ss_pred CCceeEE-Eee-CCCEEEEEcCCCcEEEEEccCCceeeee-------ccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 81 PNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPI-------AEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 81 ~~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
...+.++ ++| ++.+|++++.|+.|++||++++..+..+ .+|.. .|.+++|+|++++|++++.|+.|++||
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD-SVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS-CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC-CEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 5677888 888 8999999999999999999998877666 45644 899999999999999999999999999
Q ss_pred CCCcc
Q 028802 152 LDDIL 156 (203)
Q Consensus 152 ~~~~~ 156 (203)
+++..
T Consensus 285 ~~~~~ 289 (393)
T 1erj_A 285 LQNAN 289 (393)
T ss_dssp C----
T ss_pred CCCCC
Confidence 98754
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=3.7e-28 Score=184.69 Aligned_cols=155 Identities=15% Similarity=0.178 Sum_probs=130.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEE----eecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT----RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~----~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 76 (203)
|+|+|++ .|++|+.||+|+|||+.+++.+. .+.+|...|++++|+|++++|++++.|+.|++||+.+ +.++..+
T Consensus 88 ~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~-~~~~~~~ 165 (344)
T 4gqb_B 88 LTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ-QVVLSSY 165 (344)
T ss_dssp EEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEE
T ss_pred EEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC-CcEEEEE
Confidence 4789985 67899999999999999875433 3458999999999999999999999999999999975 5788889
Q ss_pred ecCCCCceeEE-EeeCCC-EEEEEcCCCcEEEEEccCCceeeeeccCC-CcceEEEEEeCC-CCeEEEEeCCCcEEEEeC
Q 028802 77 VGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHD-RKFLGSISHDSMLKLWDL 152 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~-~l~~~~~dg~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~ 152 (203)
.+ |...|.++ |+|++. ++++++.|+.|++||++++++...+..+. ...+.+++|+|+ +++|++++.|+.|++||+
T Consensus 166 ~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 166 RA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp CC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred cC-cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 99 99999999 999875 78899999999999999998887764332 236899999995 567889999999999999
Q ss_pred CCcccC
Q 028802 153 DDILKG 158 (203)
Q Consensus 153 ~~~~~~ 158 (203)
+++.+.
T Consensus 245 ~~~~~~ 250 (344)
T 4gqb_B 245 KSTSCV 250 (344)
T ss_dssp CC--CC
T ss_pred CCCcEE
Confidence 987654
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.2e-27 Score=182.49 Aligned_cols=155 Identities=17% Similarity=0.301 Sum_probs=139.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEee--CCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|+++.|++++.|++|++||+.+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||++. +.++..+..
T Consensus 160 ~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~-~~~~~~~~~ 238 (354)
T 2pbi_B 160 CSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS-GQCVQAFET 238 (354)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT-CCEEEEECC
T ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC-CcEEEEecC
Confidence 46899999999999999999999999999999999999999999987 568999999999999999985 567788888
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCC-CcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
|...|.++ |+|++.+|++++.|+.|++||++.++.+..+..+. ...+.+++|+|++++|++++.|+.|++||+.++.
T Consensus 239 -h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 239 -HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred -CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 99999999 99999999999999999999999887776665432 2368999999999999999999999999997765
Q ss_pred c
Q 028802 157 K 157 (203)
Q Consensus 157 ~ 157 (203)
.
T Consensus 318 ~ 318 (354)
T 2pbi_B 318 R 318 (354)
T ss_dssp E
T ss_pred e
Confidence 3
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=1.1e-27 Score=181.66 Aligned_cols=149 Identities=17% Similarity=0.237 Sum_probs=131.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceee---e
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF---V 77 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~ 77 (203)
++|+|++.+|++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. ...... .
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~--~~~~~~~~~~ 159 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG--ECKFSSAEKE 159 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS--CEEEECCTTT
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC--Cceeeeeccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999863 222222 2
Q ss_pred cCCCCceeEE-EeeCC----------CEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCc
Q 028802 78 GLSPNSVDAL-LKLDE----------DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSM 146 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~----------~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 146 (203)
. |...+.++ |+|++ .++++++.|+.|++|| ...+....+..|.. .|.+++|+|++++|++++.|+.
T Consensus 160 ~-~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~-~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 160 N-HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHES-NVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp S-CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSS-CEEEEEECTTSSEEEEEETTCE
T ss_pred C-CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccc-cceEEEECCCCCEEEEEcCCCe
Confidence 5 77789999 88886 7899999999999999 45667778888855 8999999999999999999999
Q ss_pred EEEEeCCC
Q 028802 147 LKLWDLDD 154 (203)
Q Consensus 147 i~iwd~~~ 154 (203)
|++||+.+
T Consensus 237 v~iwd~~~ 244 (343)
T 2xzm_R 237 LLIWDILN 244 (343)
T ss_dssp EEEEESSC
T ss_pred EEEEECCC
Confidence 99999954
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=5.2e-28 Score=184.69 Aligned_cols=156 Identities=23% Similarity=0.251 Sum_probs=136.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCC-EEEEecCCCeEEEEEcCCccccceee--e
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRF--V 77 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~--~ 77 (203)
|+|+|++++|++|+.|+.|++||+.+++.+..+..|...|.+++|+|++. ++++++.|+.|++||++.. .....+ .
T Consensus 145 v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~-~~~~~~~~~ 223 (357)
T 4g56_B 145 LSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP-KPATRIDFC 223 (357)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS-SCBCBCCCT
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC-ceeeeeeec
Confidence 57999999999999999999999999999999999999999999999874 7889999999999999753 333333 3
Q ss_pred cCCCCceeEE-EeeC-CCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCC-CeEEEEeCCCcEEEEeCCC
Q 028802 78 GLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR-KFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~-~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~ 154 (203)
. +...+.++ |+|+ +.+|++|+.++.|++||+++++++..+.+|.. .|++++|+|++ ++|++++.|+.|+|||+++
T Consensus 224 ~-~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~-~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 224 A-SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ-NITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp T-CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS-CEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred c-ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccce-eEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 3 56678888 9997 56888999999999999999999999999865 89999999987 5789999999999999988
Q ss_pred cccCC
Q 028802 155 ILKGS 159 (203)
Q Consensus 155 ~~~~~ 159 (203)
++...
T Consensus 302 ~~~~~ 306 (357)
T 4g56_B 302 SEVFR 306 (357)
T ss_dssp CEEEE
T ss_pred CcEeE
Confidence 76543
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=4.3e-28 Score=186.48 Aligned_cols=152 Identities=21% Similarity=0.289 Sum_probs=130.4
Q ss_pred cccc-cCCEEEEEcCCCeEEEEEcC-CCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecC
Q 028802 2 TFAA-DAMKLLGTSGDGTLSVCNLR-KNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 2 ~~sp-~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
+|+| ++++|++|+.|++|++||++ .+..+..+.+|...|.+++|+|++.+|++++.|++|++||++. +..+..+..
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~- 289 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQVYNR- 289 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEEECC-
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEEecc-
Confidence 4555 78999999999999999998 4567788899999999999999999999999999999999985 444444433
Q ss_pred C-------CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeee----ccCCCcceEEEEEeCCCCeEEEEeCCCcE
Q 028802 80 S-------PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI----AEHSEYPIESLALSHDRKFLGSISHDSML 147 (203)
Q Consensus 80 ~-------~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 147 (203)
+ ...+.++ |+|+|.++++|+.+|.|++||+..++.+..+ .+|.. .|.+++|+|+|++|++++.|+.|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG-RISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC-CCCEEEECSSSSEEEEECTTSCE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC-ceEEEEECCCCCEEEEeeCCCCE
Confidence 2 2247888 9999999999999999999999988877666 56754 89999999999999999999999
Q ss_pred EEEeCCCcc
Q 028802 148 KLWDLDDIL 156 (203)
Q Consensus 148 ~iwd~~~~~ 156 (203)
++|++....
T Consensus 369 ~iW~~~~~~ 377 (380)
T 3iz6_a 369 KIWAFSGHR 377 (380)
T ss_dssp EEEECCSSS
T ss_pred EEEecCCCc
Confidence 999997653
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1e-27 Score=182.87 Aligned_cols=148 Identities=18% Similarity=0.229 Sum_probs=130.7
Q ss_pred cccc--cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-
Q 028802 2 TFAA--DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (203)
Q Consensus 2 ~~sp--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~- 78 (203)
+|+| ++++|++|+.|+.|++||+++++++..+..|...|.+++|+|++.+|++++.|+.|++||++.. ..+..+..
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~ 281 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSKE 281 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCT
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCC
Confidence 4555 5789999999999999999999999999999999999999999999999999999999999753 34444432
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
.+...+.++ |+|++.++++++.|+.|++||+.+++.+..+.+|.. .|++++|+|++++|++++.|+.|++|+
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~-~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN-RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS-CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC-cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 023457778 999999999999999999999999999999999965 899999999999999999999999996
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.7e-27 Score=177.38 Aligned_cols=154 Identities=14% Similarity=0.152 Sum_probs=131.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCC--CeEEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcCCcc-cccee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRK--NTVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~--~~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~-~~~~~ 75 (203)
++|+|+|++|++|+.|++|+||++.. .+.+..+.+|..+|.+++|+|+ +++|++++.|++|++||+.... ..+..
T Consensus 15 ~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE
Confidence 47999999999999999999999974 3567889999999999999864 8999999999999999997532 34556
Q ss_pred eecCCCCceeEE-EeeC--CCEEEEEcCCCcEEEEEccCCce--eeeeccCCCcceEEEEEeCC-------------CCe
Q 028802 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNRI--IQPIAEHSEYPIESLALSHD-------------RKF 137 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~dg~v~v~d~~~~~~--~~~~~~~~~~~i~~~~~~~~-------------~~~ 137 (203)
+.. |...|.++ |+|+ +.+|++++.|+.|++||++++.. ...+.+|.. .|.+++|+|+ +++
T Consensus 95 ~~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 95 HAV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-CEEEEEECCCC------------CCE
T ss_pred eec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC-ccceEeecCCcccccccCCCCCCcce
Confidence 677 88999999 9997 89999999999999999987532 345677755 8999999997 579
Q ss_pred EEEEeCCCcEEEEeCCCcc
Q 028802 138 LGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~ 156 (203)
|++++.|+.|++||+++..
T Consensus 173 l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 173 FVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp EEEEETTSCEEEEEEETTT
T ss_pred EEEEcCCCcEEEEEEcCCC
Confidence 9999999999999997654
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=1.6e-27 Score=193.58 Aligned_cols=154 Identities=18% Similarity=0.228 Sum_probs=136.0
Q ss_pred CcccccCC-EEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee--
Q 028802 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-- 77 (203)
Q Consensus 1 l~~sp~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-- 77 (203)
++|+|++. .|++|+.|++|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++||+.. +.....+.
T Consensus 153 v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~ 231 (611)
T 1nr0_A 153 VDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDD 231 (611)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCT
T ss_pred EEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC-CcEeeeeccc
Confidence 47999987 699999999999999999998899999999999999999999999999999999999874 45555552
Q ss_pred -----cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeee----------------------------------
Q 028802 78 -----GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP---------------------------------- 117 (203)
Q Consensus 78 -----~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~---------------------------------- 117 (203)
+ |...|.++ |+|++++|++++.|+.|++||+.+++++..
T Consensus 232 ~~~~~~-h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 232 SLKNVA-HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 310 (611)
T ss_dssp TSSSCS-SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEE
T ss_pred cccccc-cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEe
Confidence 6 88999999 999999999999999999999987765433
Q ss_pred ---------eccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 118 ---------IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 118 ---------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+.+|.. .|.+++|+|++++|++++.|+.|++||+.++..
T Consensus 311 ~~~~~~~~~~~gh~~-~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 311 PELGSIDQVRYGHNK-AITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp TTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCCcceEEcCCCC-CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 345644 899999999999999999999999999988654
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=1.4e-27 Score=192.04 Aligned_cols=145 Identities=21% Similarity=0.356 Sum_probs=134.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.|++|++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|++|+.. +..+..+.+ |
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~~~~~~~~~-h 507 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTG-H 507 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--SCEEEEEEC-C
T ss_pred EEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--CCEEEEEeC-C
Confidence 479999999999999999999996 456778888999999999999999999999999999999964 577888999 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
...|.++ |+|++++|++++.|+.|++||. +++++..+.+|.. .|++++|+||+++|++++.|++|++||
T Consensus 508 ~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~-~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 508 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999 9999999999999999999995 6888899999965 899999999999999999999999997
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=5.5e-27 Score=174.63 Aligned_cols=153 Identities=16% Similarity=0.223 Sum_probs=130.7
Q ss_pred Cccccc--CCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcCCccc-cc
Q 028802 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFKD-CS 73 (203)
Q Consensus 1 l~~sp~--~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~~-~~ 73 (203)
|+|+|+ +++|++|+.|++|++||+.++. .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+..... ..
T Consensus 59 v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 59 VDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp EEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC
T ss_pred EEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee
Confidence 467763 8999999999999999998763 45667789999999999997 89999999999999999975422 23
Q ss_pred eeeecCCCCceeEE-EeeC-------------CCEEEEEcCCCcEEEEEccCCc----eeeeeccCCCcceEEEEEeCCC
Q 028802 74 DRFVGLSPNSVDAL-LKLD-------------EDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLALSHDR 135 (203)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~-------------~~~l~~~~~dg~v~v~d~~~~~----~~~~~~~~~~~~i~~~~~~~~~ 135 (203)
..+.+ |...+.++ |+|+ +++|++++.|+.|++||++++. ....+.+|.. .|.+++|+|++
T Consensus 139 ~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~-~V~~v~~sp~~ 216 (297)
T 2pm7_B 139 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 216 (297)
T ss_dssp EEEEC-CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred eeeec-ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC-ceEEEEECCCC
Confidence 55677 88999999 9986 5799999999999999998765 5667888865 89999999985
Q ss_pred ---CeEEEEeCCCcEEEEeCCCc
Q 028802 136 ---KFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 136 ---~~l~~~~~d~~i~iwd~~~~ 155 (203)
.+|++++.|+.|++||+++.
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESST
T ss_pred CCceEEEEEECCCcEEEEEeCCC
Confidence 78999999999999999764
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.5e-27 Score=178.16 Aligned_cols=150 Identities=19% Similarity=0.202 Sum_probs=123.9
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCC--eEEEee-cC-CcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc------cc
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRS-EF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF------KD 71 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~--~~~~~~-~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~------~~ 71 (203)
+|+|+ +|++|+.|++|++|++..+ .....+ .. |...|.+++|+|++++|++++.|+.|++|++... ..
T Consensus 21 ~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 21 DFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCE
T ss_pred ccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccce
Confidence 56666 9999999999999999875 445555 44 8999999999999999999999999999998521 23
Q ss_pred cceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccC----CceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCc
Q 028802 72 CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP----NRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSM 146 (203)
Q Consensus 72 ~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 146 (203)
.+..+.+ |...|.++ |+|++++|++++.|+.|++||++. .+++..+.+|.. .|.+++|+|++.+|++++.|+.
T Consensus 99 ~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 99 LLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ-DVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS-CEEEEEECSSSSEEEEEETTSC
T ss_pred eEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC-ceEEEEECCCCCEEEEEcCCCe
Confidence 4566778 99999999 999999999999999999999943 245677888855 8999999999999999999999
Q ss_pred EEEEeCCCc
Q 028802 147 LKLWDLDDI 155 (203)
Q Consensus 147 i~iwd~~~~ 155 (203)
|++||+.+.
T Consensus 177 i~iW~~~~~ 185 (330)
T 2hes_X 177 VRIWKDYDD 185 (330)
T ss_dssp EEEEEEETT
T ss_pred EEEEECCCC
Confidence 999998654
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=3.7e-27 Score=191.48 Aligned_cols=154 Identities=16% Similarity=0.199 Sum_probs=130.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC--eEEEe--------------------------------------------ec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN--TVQTR--------------------------------------------SE 34 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~--~~~~~--------------------------------------------~~ 34 (203)
++|||+|++||+|+.|++|+|||+.++ ..... +.
T Consensus 65 ~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~ 144 (611)
T 1nr0_A 65 AKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 144 (611)
T ss_dssp EEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC
T ss_pred EEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceec
Confidence 579999999999999999999998532 11112 23
Q ss_pred CCcccEEEEEEeeCCC-EEEEecCCCeEEEEEcCCccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC
Q 028802 35 FSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN 112 (203)
Q Consensus 35 ~~~~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~ 112 (203)
+|...|.+++|+|++. .|++++.|+.|++||... ......+.+ |...|.++ |+|++++|++++.|+.|++||+.++
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~-H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-CeEeeeecc-ccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 4566677777777765 588899999999999864 466778888 99999999 9999999999999999999999999
Q ss_pred ceeeeec-------cCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 113 RIIQPIA-------EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 113 ~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+.+..+. +|.. .|.+++|+|++++|++++.|++|++||+.++..
T Consensus 223 ~~~~~~~~~~~~~~~h~~-~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSG-SVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp CEEEECBCTTSSSCSSSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cEeeeeccccccccccCC-CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 8887774 6755 899999999999999999999999999987654
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=5e-27 Score=180.52 Aligned_cols=156 Identities=18% Similarity=0.220 Sum_probs=136.7
Q ss_pred Cccccc-CCEEEEEcCCCeEEEEEcCCCeEEEee-----cCCcccEEEEEEee-CCCEEEEecCCCeEEEEEcCCccccc
Q 028802 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTRS-----EFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCS 73 (203)
Q Consensus 1 l~~sp~-~~~l~~~~~d~~i~v~d~~~~~~~~~~-----~~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~ 73 (203)
+.|+|+ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++.+|++++.|+.|++||++.....+
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~ 242 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV 242 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 357776 457999999999999999999887766 57888999999987 88999999999999999998656777
Q ss_pred eeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCC------cceEEEEEeCCCCeEEEEeCCCc
Q 028802 74 DRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE------YPIESLALSHDRKFLGSISHDSM 146 (203)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~~d~~ 146 (203)
..+.+ |...|.++ |+|++.+|++++.|+.|++||++++..+..+..+.. ..|++++|+|+|++|++++.||.
T Consensus 243 ~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 243 RTYHG-HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp EEECC-CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EEECC-cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 88888 99999999 999999999999999999999999988877765422 13889999999999999999999
Q ss_pred EEEEeCCCccc
Q 028802 147 LKLWDLDDILK 157 (203)
Q Consensus 147 i~iwd~~~~~~ 157 (203)
|++||+.++..
T Consensus 322 i~vwd~~~~~~ 332 (380)
T 3iz6_a 322 CYVWDTLLAEM 332 (380)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCce
Confidence 99999876653
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=4.7e-27 Score=181.44 Aligned_cols=153 Identities=18% Similarity=0.305 Sum_probs=133.7
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCeEEEee-------cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc---
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRS-------EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF--- 69 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~-------~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~--- 69 (203)
++|+| ++++|++|+.|+.|++||+.++..+..+ .+|...|.+++|+|++.+|++++.|+.|++||+...
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 36888 8999999999999999999998777666 578899999999999999999999999999999642
Q ss_pred --------cccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeC------C
Q 028802 70 --------KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH------D 134 (203)
Q Consensus 70 --------~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~------~ 134 (203)
..+...+.+ |...+.++ |+|++.+|++++.|+.|++||+.+++++..+.+|.. .|.+++|++ +
T Consensus 292 ~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~-~v~~v~~~~~~~~~p~ 369 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN-SVISVAVANGSSLGPE 369 (393)
T ss_dssp ---------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSCTTCTT
T ss_pred ccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC-CEEEEEecCCcCcCCC
Confidence 123445677 88899999 999999999999999999999999999999999965 899999886 6
Q ss_pred CCeEEEEeCCCcEEEEeCCCc
Q 028802 135 RKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 135 ~~~l~~~~~d~~i~iwd~~~~ 155 (203)
+++|++++.|+.|++|++...
T Consensus 370 ~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 370 YNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CEEEEEEETTSEEEEEEEEEC
T ss_pred CCEEEEECCCCcEEECccccc
Confidence 789999999999999998654
No 32
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=2.4e-27 Score=180.98 Aligned_cols=152 Identities=17% Similarity=0.212 Sum_probs=129.3
Q ss_pred CcccccCC-EEEEEcCCCeEEEEEcCCCeEEEeec--CCcccEEEEEEeeC-CCEEEEecCCCeEEEEEcCCccccceee
Q 028802 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~l~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 76 (203)
|+|+|++. ++++++.|+.|++||+++++....+. .+...+.+++|+|+ +.+|++++.|+.|++||+.. +..+..+
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~ 265 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTS 265 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEEE
T ss_pred EEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEEE
Confidence 46888875 78999999999999999887665543 46678999999997 46889999999999999985 5677888
Q ss_pred ecCCCCceeEE-EeeCC-CEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeC-CCCeEEEEeCCCcEEEEeCC
Q 028802 77 VGLSPNSVDAL-LKLDE-DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~-~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~ 153 (203)
.. +...|.++ |+|++ ++|++++.|+.|+|||+++++++..+ +|.. .|++++|+| ++.+|++++.|+.|++|++.
T Consensus 266 ~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~-~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 266 AV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRD-FVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSS-CEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred ec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCC-CEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 88 99999999 99987 57899999999999999998877655 6755 899999999 78999999999999999997
Q ss_pred Ccc
Q 028802 154 DIL 156 (203)
Q Consensus 154 ~~~ 156 (203)
+..
T Consensus 343 ~~~ 345 (357)
T 4g56_B 343 SEG 345 (357)
T ss_dssp ---
T ss_pred CCC
Confidence 643
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=4.4e-27 Score=193.44 Aligned_cols=155 Identities=19% Similarity=0.224 Sum_probs=138.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccce---eee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD---RFV 77 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~---~~~ 77 (203)
++|+|++++|++|+.|++|+|||+.++..+..+.+|...|.+++|+|++++|++++.|++|++||+... .... ...
T Consensus 436 v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~ 514 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE-CKYTISEGGE 514 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC-EEEEECSSTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC-cceeeccCCC
Confidence 478999999999999999999999999999999999999999999999999999999999999998532 1111 123
Q ss_pred cCCCCceeEE-EeeCC--CEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 78 GLSPNSVDAL-LKLDE--DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~--~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
+ |...+.++ |+|++ ..+++++.|+.|++||+++++....+.+|.. .|++++|+|++++|++++.|+.|++||+++
T Consensus 515 ~-h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~-~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 515 G-HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG-YVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp S-CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred C-CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC-CEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 5 77789999 99976 6899999999999999999999999999965 899999999999999999999999999988
Q ss_pred cccC
Q 028802 155 ILKG 158 (203)
Q Consensus 155 ~~~~ 158 (203)
+...
T Consensus 593 ~~~~ 596 (694)
T 3dm0_A 593 GKKL 596 (694)
T ss_dssp TEEE
T ss_pred CceE
Confidence 7654
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=5.5e-28 Score=184.95 Aligned_cols=153 Identities=13% Similarity=0.097 Sum_probs=129.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC--eEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcc--ccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~ 76 (203)
++|+|++++|++++.|+.|++|++.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.... .....+
T Consensus 17 ~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp CEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEEC
T ss_pred EEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe
Confidence 589999999999999999999999988 6778888999999999999999999999999999999997532 245556
Q ss_pred ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc---eeeeecc-CCCcceEEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR---IIQPIAE-HSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~---~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
.. |...+.++ |+|++++|++++.|+.|++||+++++ ....+.. |.. .|.+++|+|++++|++++.|+.|++||
T Consensus 97 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 97 LR-LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS-TILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp CC-CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS-CEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred cc-cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC-CeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 67 88999999 99999999999999999999999876 3666776 744 899999999999999999999999999
Q ss_pred CCCc
Q 028802 152 LDDI 155 (203)
Q Consensus 152 ~~~~ 155 (203)
+.+.
T Consensus 175 ~~~~ 178 (377)
T 3dwl_C 175 AYVR 178 (377)
T ss_dssp ECCS
T ss_pred EEec
Confidence 9643
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=3.8e-27 Score=182.58 Aligned_cols=155 Identities=18% Similarity=0.297 Sum_probs=133.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+.. +..+..+.. +
T Consensus 145 ~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~-~ 222 (420)
T 3vl1_A 145 LKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT-GTTIHTFNR-K 222 (420)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECB-T
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC-CceeEEeec-C
Confidence 57999999999999999999999999988889999999999999999999999999999999999975 455555542 2
Q ss_pred ------------------------CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCC
Q 028802 81 ------------------------PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR 135 (203)
Q Consensus 81 ------------------------~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 135 (203)
...+.++ |+|++++|++++.+|.|++||+++++.+..+.......|.+++|+|++
T Consensus 223 ~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (420)
T 3vl1_A 223 ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNN 302 (420)
T ss_dssp TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSC
T ss_pred CCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCC
Confidence 2344445 678999999999999999999999887777654324489999999999
Q ss_pred C-eEEEEeCCCcEEEEeCCCccc
Q 028802 136 K-FLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 136 ~-~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+ +|++++.|+.|++||++++..
T Consensus 303 ~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 303 ANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TTEEEEEETTSEEEEEETTCTTS
T ss_pred CCEEEEEeCCCeEEEEEcCCCcC
Confidence 8 999999999999999988643
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.3e-26 Score=174.30 Aligned_cols=155 Identities=18% Similarity=0.248 Sum_probs=133.1
Q ss_pred Ccccc--cCCEEEEEcCCCeEEEEEcCCC---------eEEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcC
Q 028802 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKN---------TVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWG 67 (203)
Q Consensus 1 l~~sp--~~~~l~~~~~d~~i~v~d~~~~---------~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~ 67 (203)
|+|+| ++++|++++.|+.|++||+.++ +.+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.
T Consensus 63 ~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 63 IDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred EEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 46888 6999999999999999999876 567788899999999999999 9999999999999999986
Q ss_pred Cccc-----------------------------------------------------------cceeeecCCCCceeEE-
Q 028802 68 YFKD-----------------------------------------------------------CSDRFVGLSPNSVDAL- 87 (203)
Q Consensus 68 ~~~~-----------------------------------------------------------~~~~~~~~~~~~v~~~- 87 (203)
.... .+..+.. |...|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~ 221 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSIS 221 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-CCSCEEEEE
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-CCcceeEEE
Confidence 4211 0223445 77889999
Q ss_pred EeeCC----CEEEEEcCCCcEEEEEccCC----------------------------------------------ceeee
Q 028802 88 LKLDE----DRVITGSENGLISLVGILPN----------------------------------------------RIIQP 117 (203)
Q Consensus 88 ~~~~~----~~l~~~~~dg~v~v~d~~~~----------------------------------------------~~~~~ 117 (203)
|+|++ .+|++++.||.|++||++.+ +.+..
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 99998 89999999999999999875 56667
Q ss_pred eccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 118 IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 118 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+.+|.. .|++++|+|++++|++++.|+.|++|++.++..
T Consensus 302 ~~~h~~-~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 302 HDDHNG-EVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp ECTTSS-CEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred Eecccc-cEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 778855 899999999999999999999999999987643
No 37
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.5e-26 Score=173.93 Aligned_cols=153 Identities=20% Similarity=0.267 Sum_probs=135.3
Q ss_pred CcccccC-CEEEEEcCCCeEEEEEcCC-----CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccce
Q 028802 1 MTFAADA-MKLLGTSGDGTLSVCNLRK-----NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~-~~l~~~~~d~~i~v~d~~~-----~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 74 (203)
|+|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++.+|++++.|+.|++||+.+ +..+.
T Consensus 23 l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~-~~~~~ 101 (319)
T 3frx_A 23 LATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT-GETYQ 101 (319)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEE
T ss_pred EEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC-CCeeE
Confidence 4688865 8999999999999999864 345678889999999999999999999999999999999975 57778
Q ss_pred eeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCC------CCeEEEEeCCCcE
Q 028802 75 RFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHD------RKFLGSISHDSML 147 (203)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~d~~i 147 (203)
.+.+ |...|.++ |+|++.+|++++.|+.|++||++ +..+..+.+|.. .|.++.|+|. +..|++++.|+.|
T Consensus 102 ~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 102 RFVG-HKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND-WVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp EEEC-CSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS-CEEEEEECCC------CCEEEEEETTSCE
T ss_pred EEcc-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC-cEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 8899 99999999 99999999999999999999986 567778888865 8999999985 4489999999999
Q ss_pred EEEeCCCccc
Q 028802 148 KLWDLDDILK 157 (203)
Q Consensus 148 ~iwd~~~~~~ 157 (203)
++||+++...
T Consensus 179 ~~wd~~~~~~ 188 (319)
T 3frx_A 179 KAWNLNQFQI 188 (319)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCcchh
Confidence 9999987654
No 38
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=8.8e-27 Score=174.18 Aligned_cols=148 Identities=13% Similarity=0.088 Sum_probs=116.5
Q ss_pred cccc---cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCc---ccEEEEEEeeCCCEE------------EEecCCCeEEE
Q 028802 2 TFAA---DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE---EELTSVVLMKNGRKV------------VCGSQSGTVLL 63 (203)
Q Consensus 2 ~~sp---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~---~~i~~l~~~~~~~~l------------~~~~~d~~i~v 63 (203)
+|+| ++.+|++++.|++|+|||+.+++++.++.+|. ..+.+++|+|++.++ ++|+.|++|++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 5677 66889999999999999999999999997643 357788999999876 45778999999
Q ss_pred EEcCCccccceee-----ecCCCCceeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeE
Q 028802 64 YSWGYFKDCSDRF-----VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (203)
Q Consensus 64 ~d~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (203)
||..+ +..+..+ .+ |...+.+ .+.++.++++++.|++|+|||+.+++++.++.+|....+.+++|+|||++|
T Consensus 265 Wd~~t-gk~l~v~~~~~p~G-h~~~~ls-g~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 265 INPKT-TLSVGVMLYCLPPG-QAGRFLE-GDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp EETTT-TEEEEEEEECCCTT-CCCCEEE-EEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred EECCC-CEEEEEEEeeccCC-CcceeEc-cccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 99975 4444433 23 4433322 344588999999999999999999999999998865345568999999999
Q ss_pred EEEeCCCcEEEEeC
Q 028802 139 GSISHDSMLKLWDL 152 (203)
Q Consensus 139 ~~~~~d~~i~iwd~ 152 (203)
++|+.|++|+|||+
T Consensus 342 aSGS~D~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEECCCcEEEecC
Confidence 99999999999996
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=6.3e-27 Score=181.35 Aligned_cols=154 Identities=13% Similarity=0.164 Sum_probs=137.0
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 81 (203)
.|+|++++|++++.|+.|++|++.++.....+..|...|.+++|+|++++|++++.|+.|++||+.. +..+..+.+ |.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~-h~ 181 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD-GSNPRTLIG-HR 181 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCCCEEEEC-CS
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC-CcCceEEcC-CC
Confidence 5789999999999999999999999988888889999999999999999999999999999999975 567778888 99
Q ss_pred CceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCC---C--------------------cceEEEEEeCCCCe
Q 028802 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS---E--------------------YPIESLALSHDRKF 137 (203)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~---~--------------------~~i~~~~~~~~~~~ 137 (203)
..|.++ |+|++.+|++++.|+.|++||+++++.+..+..+. . ..+.+++|+|++++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY 261 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE
Confidence 999999 99999999999999999999999999888876532 1 13444556789999
Q ss_pred EEEEeCCCcEEEEeCCCccc
Q 028802 138 LGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~~ 157 (203)
|++++.|+.|++||+++...
T Consensus 262 l~~~~~dg~i~i~d~~~~~~ 281 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQ 281 (420)
T ss_dssp EEEEETTSCEEEEETTTCCE
T ss_pred EEEEcCCCeEEEEECCCCce
Confidence 99999999999999988754
No 40
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=6e-27 Score=181.06 Aligned_cols=155 Identities=11% Similarity=0.153 Sum_probs=138.7
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCC-------eEEEeecCCcccEEEEEEeeCC-CEEEEecCCCeEEEEEcCCccc
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKN-------TVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKD 71 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~-------~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~d~~i~v~d~~~~~~ 71 (203)
|+|+| ++++|++|+.||.|++|++.++ ..+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.. +.
T Consensus 87 ~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~ 165 (402)
T 2aq5_A 87 IAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GA 165 (402)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-TE
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-CC
Confidence 47999 8999999999999999999887 5667888999999999999998 6999999999999999985 46
Q ss_pred cceee--ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeee-ccCCCcceEEEEEeCCCCeEEEE---eCC
Q 028802 72 CSDRF--VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI-AEHSEYPIESLALSHDRKFLGSI---SHD 144 (203)
Q Consensus 72 ~~~~~--~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~---~~d 144 (203)
.+..+ .. |...+.++ |+|++.+|++++.|+.|++||+++++.+..+ ..|....+.++.|+|++++|+++ +.|
T Consensus 166 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d 244 (402)
T 2aq5_A 166 AVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSE 244 (402)
T ss_dssp EEEEECTTT-CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCC
T ss_pred ccEEEecCC-CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCC
Confidence 66677 67 88999999 9999999999999999999999999998888 67755458999999999999998 789
Q ss_pred CcEEEEeCCCccc
Q 028802 145 SMLKLWDLDDILK 157 (203)
Q Consensus 145 ~~i~iwd~~~~~~ 157 (203)
+.|++||+++...
T Consensus 245 ~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 245 RQVALWDTKHLEE 257 (402)
T ss_dssp EEEEEEETTBCSS
T ss_pred ceEEEEcCccccC
Confidence 9999999988654
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.1e-26 Score=173.16 Aligned_cols=155 Identities=14% Similarity=0.187 Sum_probs=132.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC----eEEEeecCCcccEEEEEEee--CCCEEEEecCCCeEEEEEcCCcc----
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK---- 70 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~~~---- 70 (203)
|+|+|++++|++++.||.|++|++.++ .....+.+|...|.+++|+| ++.+|++++.|+.|++||+....
T Consensus 17 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence 579999999999999999999999875 46677789999999999999 69999999999999999997532
Q ss_pred ----ccceeeecCCCCceeEE-EeeC--CCEEEEEcCCCcEEEEEccCCce-----------------------------
Q 028802 71 ----DCSDRFVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNRI----------------------------- 114 (203)
Q Consensus 71 ----~~~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~dg~v~v~d~~~~~~----------------------------- 114 (203)
..+..+.. |...+.++ |+|+ +.++++++.|+.|++||+++++.
T Consensus 97 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 97 GRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred ccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 33556677 88999999 9999 99999999999999999875431
Q ss_pred -------------------------------eeeeccCCCcceEEEEEeCCC----CeEEEEeCCCcEEEEeCCCccc
Q 028802 115 -------------------------------IQPIAEHSEYPIESLALSHDR----KFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 115 -------------------------------~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+..+.+|.. .|.+++|+|++ ++|++++.|+.|++||+++...
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 252 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS-LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLS 252 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS-CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc-ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcC
Confidence 334455644 89999999998 7999999999999999987643
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=2.3e-27 Score=181.55 Aligned_cols=155 Identities=14% Similarity=0.085 Sum_probs=125.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe---EEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc--ccee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~ 75 (203)
++|+|++++|++++.|++|++||+.++. ....+..|...|.+++|+|++++|++++.|+.|++||+..... ....
T Consensus 61 ~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 61 VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp EEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE
Confidence 4799999999999999999999999876 5667788999999999999999999999999999999975322 2444
Q ss_pred eecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEcc------------------CCceeeeeccCCCcceEEEEEeCCCC
Q 028802 76 FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGIL------------------PNRIIQPIAEHSEYPIESLALSHDRK 136 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (203)
+...|...+.++ |+|++++|++++.|+.|++||+. .++++..+ .|.. .|.+++|+|+++
T Consensus 141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~v~~~~~sp~~~ 218 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG-WVHAVGFSPSGN 218 (377)
T ss_dssp ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS-SEEEEEECTTSS
T ss_pred eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc-eEEEEEECCCCC
Confidence 443267889999 99999999999999999999985 34556666 6744 899999999999
Q ss_pred eEEEEeCCCcEEEEeCCCccc
Q 028802 137 FLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+|++++.|+.|++||+.++..
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTS
T ss_pred EEEEEeCCCcEEEEECCCCCC
Confidence 999999999999999998765
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=3e-26 Score=184.19 Aligned_cols=147 Identities=20% Similarity=0.343 Sum_probs=135.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+|+|++++|++++.|+.|++|+. +++.+..+..|...|.+++|+|++++|++++.|+.|++|+.. +..+..+.. |
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~-~ 466 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTG-H 466 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcC-C
Confidence 479999999999999999999995 566778888999999999999999999999999999999974 567788888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
...+.++ |+|++++|++++.|+.|++||. +++++..+.+|.. .|++++|+|++++|++++.|+.|++||..
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCC-CEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 9999999 9999999999999999999995 6888899999965 89999999999999999999999999964
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=5e-27 Score=176.35 Aligned_cols=153 Identities=17% Similarity=0.182 Sum_probs=130.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEee--CCCEEEEecCCCeEEEEEcCCcc-cccee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~~~-~~~~~ 75 (203)
++|+|+|++|++|+.|++|++||+.++. .+..+.+|...|.+++|+| ++++|++++.|++|++||+.... .....
T Consensus 19 v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 19 AQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE 98 (316)
T ss_dssp EEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE
T ss_pred eeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE
Confidence 4799999999999999999999998764 4677889999999999986 48999999999999999997532 34556
Q ss_pred eecCCCCceeEE-EeeC--CCEEEEEcCCCcEEEEEccCCce---eeeeccCCCcceEEEEEeCC---------------
Q 028802 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNRI---IQPIAEHSEYPIESLALSHD--------------- 134 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~dg~v~v~d~~~~~~---~~~~~~~~~~~i~~~~~~~~--------------- 134 (203)
+.+ |...|.++ |+|+ +.+|++++.|+.|++|+++.+.. ...+.+|.. .|.+++|+|+
T Consensus 99 ~~~-h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 99 HAG-HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI-GCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp ECC-CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS-CBCCCEECCCCCC------CCSCCC
T ss_pred ccC-CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC-CcceEEEccccCCccccccccccCc
Confidence 777 89999999 9997 88999999999999999987532 345567754 7999999997
Q ss_pred --CCeEEEEeCCCcEEEEeCCCc
Q 028802 135 --RKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 135 --~~~l~~~~~d~~i~iwd~~~~ 155 (203)
+.+|++++.|+.|++||+++.
T Consensus 177 ~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 177 NYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp CCCCBEECCBTTSBCCEEEECTT
T ss_pred cccceEEEecCCCeEEEEEeCCC
Confidence 478999999999999999753
No 45
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=1.3e-25 Score=170.36 Aligned_cols=147 Identities=20% Similarity=0.257 Sum_probs=127.5
Q ss_pred cc-cCCEEEEEcCCCeEEEEEcCC-------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccccee
Q 028802 4 AA-DAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 4 sp-~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 75 (203)
+| ++++|++|+.|++|++|++.+ +.....+.+|...|.+++|+|++.+|++++.|+.|++||+.+ +..+..
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~-~~~~~~ 113 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT-GTTYKR 113 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS-SCEEEE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-CcEEEE
Confidence 55 899999999999999999874 345677889999999999999999999999999999999975 567788
Q ss_pred eecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeec---cCCCcceEEEEEeCCC----------CeEEEE
Q 028802 76 FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA---EHSEYPIESLALSHDR----------KFLGSI 141 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~---~~~~~~i~~~~~~~~~----------~~l~~~ 141 (203)
+.+ |...|.++ |+|++++|++++.|+.|++||+... ...... .|.. .|.+++|+|++ .+|+++
T Consensus 114 ~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~l~s~ 190 (343)
T 2xzm_R 114 FVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSD-WVSCVRYSPIMKSANKVQPFAPYFASV 190 (343)
T ss_dssp EEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSS-CEEEEEECCCCCSCSCCCSSCCEEEEE
T ss_pred EcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCc-eeeeeeeccccccccccCCCCCEEEEE
Confidence 888 99999999 9999999999999999999999743 333332 5544 79999999987 789999
Q ss_pred eCCCcEEEEeCCC
Q 028802 142 SHDSMLKLWDLDD 154 (203)
Q Consensus 142 ~~d~~i~iwd~~~ 154 (203)
+.|+.|++||...
T Consensus 191 ~~d~~i~iwd~~~ 203 (343)
T 2xzm_R 191 GWDGRLKVWNTNF 203 (343)
T ss_dssp ETTSEEEEEETTT
T ss_pred cCCCEEEEEcCCC
Confidence 9999999999543
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=3e-26 Score=179.06 Aligned_cols=155 Identities=17% Similarity=0.229 Sum_probs=127.6
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEee-CCCEEEEecCCCeEEEEEcCCccccceee
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 76 (203)
|+|+| ++++||+|+.||+|+|||+.++. ....+.+|...|++|+|+| ++.+|++++.|++|++||+.. .....+
T Consensus 125 l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~--~~~~~~ 202 (435)
T 4e54_B 125 LAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG--NILRVF 202 (435)
T ss_dssp EEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS--CEEEEE
T ss_pred EEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC--CceeEE
Confidence 57999 56789999999999999998764 3445668999999999998 689999999999999999974 333333
Q ss_pred ecC--CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC-eEEEEeCCCcEEEEeC
Q 028802 77 VGL--SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDSMLKLWDL 152 (203)
Q Consensus 77 ~~~--~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~ 152 (203)
... +...+.++ |+|++.+|++|+.+|.|++||++ ++.+..+.+|.. .|.+++|+|++. +|++++.|+.|++||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~ 280 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKK-KVTHVALNPCCDWFLATASVDQTVKIWDL 280 (435)
T ss_dssp ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSS-CEEEEEECTTCSSEEEEEETTSBCCEEET
T ss_pred eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccc-eEEeeeecCCCceEEEEecCcceeeEEec
Confidence 320 23346777 89999999999999999999986 566778888855 899999999886 6778999999999999
Q ss_pred CCcccCC
Q 028802 153 DDILKGS 159 (203)
Q Consensus 153 ~~~~~~~ 159 (203)
++.....
T Consensus 281 ~~~~~~~ 287 (435)
T 4e54_B 281 RQVRGKA 287 (435)
T ss_dssp TTCCSSS
T ss_pred ccccccc
Confidence 8876543
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=4.9e-26 Score=189.53 Aligned_cols=154 Identities=16% Similarity=0.246 Sum_probs=141.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.+|.|++||+.++..+..+..|..+|.+++|+|++++|++++.+|.|++||+.+ +..+..+.. |
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~-~ 96 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT-GEKVVDFEA-H 96 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEec-C
Confidence 57999999999999999999999999999999999999999999999999999999999999999975 577788888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC-ceeeeeccCCCcceEEEEEeC-CCCeEEEEeCCCcEEEEeCCCccc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
...+.++ |+|++++|++++.+|.|++|++.++ .....+..|.. .|.+++|+| ++..|++++.|+.|++||+.+...
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~ 175 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP 175 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC-cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 9999999 9999999999999999999999987 66677788855 899999999 889999999999999999977654
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=8.2e-26 Score=173.79 Aligned_cols=152 Identities=12% Similarity=0.142 Sum_probs=134.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecC---C---cccEEEEEEeeCCCEEEEecCC---CeEEEEEcCCccc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF---S---EEELTSVVLMKNGRKVVCGSQS---GTVLLYSWGYFKD 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~---~~~i~~l~~~~~~~~l~~~~~d---~~i~v~d~~~~~~ 71 (203)
++|+|++ +|++++.|+.|++||+.+++.+..+.. | ...|.+++|+|++.+|++++.+ +.|++||+.. ..
T Consensus 192 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~ 269 (397)
T 1sq9_A 192 VDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GE 269 (397)
T ss_dssp EEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CC
T ss_pred EEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-Cc
Confidence 4789999 999999999999999999999988888 8 8999999999999999999999 9999999975 45
Q ss_pred cceeeecC------------CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeec------cC-----------
Q 028802 72 CSDRFVGL------------SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA------EH----------- 121 (203)
Q Consensus 72 ~~~~~~~~------------~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~------~~----------- 121 (203)
.+..+... |...+.++ |+|++.+|++++.|+.|++||+.+++.+..+. .|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 349 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 349 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccc
Confidence 55555421 46788999 99999999999999999999999999998888 66
Q ss_pred ----CCcceEEEEEeCCC----------CeEEEEeCCCcEEEEeCCCc
Q 028802 122 ----SEYPIESLALSHDR----------KFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 122 ----~~~~i~~~~~~~~~----------~~l~~~~~d~~i~iwd~~~~ 155 (203)
.. .|.+++|+|++ ++|++++.|+.|++|++.++
T Consensus 350 ~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 350 DSLAEP-GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CBCSSC-CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccCC-ceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 55 89999999998 79999999999999999765
No 49
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.8e-26 Score=175.52 Aligned_cols=157 Identities=10% Similarity=0.176 Sum_probs=141.2
Q ss_pred Cccccc-CCEEEEEcCCCeEEEEEcCCCeEEEeecCC------cccEEEEEEeeCC-CEEEEecCCC---eEEEEEcCCc
Q 028802 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTRSEFS------EEELTSVVLMKNG-RKVVCGSQSG---TVLLYSWGYF 69 (203)
Q Consensus 1 l~~sp~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------~~~i~~l~~~~~~-~~l~~~~~d~---~i~v~d~~~~ 69 (203)
++|+|+ +.+|++++.|+.|++||+.+++.+..+..+ ...|.+++|+|++ .+|++++.++ .|++||++..
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 478998 789999999999999999999888888776 7889999999997 6899999998 9999999865
Q ss_pred cccceeee-cCCCCceeEE-Eee-CCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCC-CeEEEEeCCC
Q 028802 70 KDCSDRFV-GLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR-KFLGSISHDS 145 (203)
Q Consensus 70 ~~~~~~~~-~~~~~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~ 145 (203)
...+..+. . |...+.++ |+| ++.+|++++.|+.|++||+.+++.+..+..|.. .|.+++|+|++ .+|++++.|+
T Consensus 251 ~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 251 NTPLQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN-WCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp TSCSBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS-CCCCEEECTTCTTEEEECCSSS
T ss_pred CCCcEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC-ceEEEEECCCCCCEEEEEecCC
Confidence 56677777 7 89999999 999 999999999999999999999999999999855 89999999999 8999999999
Q ss_pred cEEEEeCCCcccCC
Q 028802 146 MLKLWDLDDILKGS 159 (203)
Q Consensus 146 ~i~iwd~~~~~~~~ 159 (203)
.|++|++.+.....
T Consensus 329 ~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 329 KIEVQTLQNLTNTL 342 (416)
T ss_dssp EEEEEESCCCCCSS
T ss_pred cEEEEEccCCCCCc
Confidence 99999998876543
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.3e-26 Score=172.27 Aligned_cols=154 Identities=16% Similarity=0.164 Sum_probs=134.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcC--CCeEEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcCCcc-cccee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~-~~~~~ 75 (203)
|+|+|++++|++|+.||.|++|++. ++..+..+..|...|.+++|+++ +.+|++++.|+.|++||+.... ..+..
T Consensus 17 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee
Confidence 5799999999999999999999998 55677888899999999999987 8999999999999999997532 15566
Q ss_pred eecCCCCceeEE-EeeC--CCEEEEEcCCCcEEEEEccCCc--eeeeeccCCCcceEEEEEeC-------------CCCe
Q 028802 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLALSH-------------DRKF 137 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~dg~v~v~d~~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~ 137 (203)
+.. |...+.++ |+|+ +.++++++.++.|++||+..+. ....+..|.. .|.+++|+| ++.+
T Consensus 97 ~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 97 HAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT-CEEEEEECCCC----------CTTCE
T ss_pred ecC-CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC-ceEEEEEcCccccccccccCCCCCCE
Confidence 777 88999999 9999 9999999999999999998763 3345566744 899999999 6999
Q ss_pred EEEEeCCCcEEEEeCCCcc
Q 028802 138 LGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~ 156 (203)
|++++.|+.|++||+++..
T Consensus 175 l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 175 FVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp EEEEETTSCEEEEEEETTT
T ss_pred EEEEeCCCeEEEEEecCCC
Confidence 9999999999999997654
No 51
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=2.5e-26 Score=179.51 Aligned_cols=153 Identities=16% Similarity=0.174 Sum_probs=128.6
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCeEEEeec--CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 77 (203)
|+|+| ++++|++|+.|++|++||+.++....... .+...+.+++|+|++.+|++|+.+|.|++||+. +..+..+.
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~--~~~~~~~~ 247 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD--GKELWNLR 247 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS--SCBCCCSB
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC--cceeEEEe
Confidence 57998 68999999999999999998765443333 334567899999999999999999999999986 45677788
Q ss_pred cCCCCceeEE-EeeCCC-EEEEEcCCCcEEEEEccCCceeee---eccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeC
Q 028802 78 GLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPNRIIQP---IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~-~l~~~~~dg~v~v~d~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (203)
. |...|.++ |+|++. ++++++.|+.|++||+++.+.... ..+|.. .|++++|+|+|++|++++.|+.|+|||+
T Consensus 248 ~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 248 M-HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRH-PVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp C-CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSS-CEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred c-ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccc-cccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 8 99999999 999876 677899999999999987654433 345644 8999999999999999999999999999
Q ss_pred CCccc
Q 028802 153 DDILK 157 (203)
Q Consensus 153 ~~~~~ 157 (203)
.++..
T Consensus 326 ~~~~~ 330 (435)
T 4e54_B 326 SQWDC 330 (435)
T ss_dssp SSSSS
T ss_pred CCCcc
Confidence 87653
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=8.7e-26 Score=195.63 Aligned_cols=154 Identities=17% Similarity=0.250 Sum_probs=143.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++|+.||+|++|++.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+ +..+..+.. |
T Consensus 621 ~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~-~ 698 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT-GKLVHTYDE-H 698 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC-CceEEEEcC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999975 577888888 9
Q ss_pred CCceeEE-Eee--CCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 81 PNSVDAL-LKL--DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 81 ~~~v~~~-~~~--~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
...+.++ |+| ++.++++++.|+.|++||+.+++++..+.+|.. .|.+++|+|++++|++++.||.|++||+.++..
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN-SVNHCRFSPDDELLASCSADGTLRLWDVRSANE 777 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS-CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC-CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcc
Confidence 9999999 888 566899999999999999999999999999965 899999999999999999999999999987754
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=1.3e-25 Score=172.21 Aligned_cols=152 Identities=15% Similarity=0.222 Sum_probs=132.1
Q ss_pred CcccccC-CEEEEEcCCCeEEEEEcCCCeEEEeec--CCcccEEEEEEee-CCCEEEEecCCCeEEEEEcCCccccceee
Q 028802 1 MTFAADA-MKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 76 (203)
|+|+|++ ++|++|+.|+.|++|++.++.....+. +|...|.+++|+| ++.+|++++.|+.|++||+.. ..+..+
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~ 156 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG--SVIQVF 156 (383)
T ss_dssp EEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS--CEEEEE
T ss_pred EEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC--CceEEE
Confidence 4799999 899999999999999999876665554 6899999999999 789999999999999999973 445555
Q ss_pred ecC--CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC-eEEEEeCCCcEEEEeC
Q 028802 77 VGL--SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDSMLKLWDL 152 (203)
Q Consensus 77 ~~~--~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~ 152 (203)
... +...+.++ |+|++++|++++.++.|++||+ +++.+..+..|.. .|.+++|+|+++ +|++++.|+.|++||+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 234 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA-KVTHAEFNPRCDWLMATSSVDATVKLWDL 234 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS-CEEEEEECSSCTTEEEEEETTSEEEEEEG
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC-cEEEEEECCCCCCEEEEEeCCCEEEEEeC
Confidence 440 33678999 9999999999999999999999 5778888888865 899999999998 8999999999999999
Q ss_pred CCcc
Q 028802 153 DDIL 156 (203)
Q Consensus 153 ~~~~ 156 (203)
++..
T Consensus 235 ~~~~ 238 (383)
T 3ei3_B 235 RNIK 238 (383)
T ss_dssp GGCC
T ss_pred CCCC
Confidence 8743
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=2e-26 Score=173.04 Aligned_cols=153 Identities=18% Similarity=0.213 Sum_probs=129.0
Q ss_pred Ccccc--cCCEEEEEcCCCeEEEEEcCCC--eEEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcCCccc--c
Q 028802 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFKD--C 72 (203)
Q Consensus 1 l~~sp--~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~~--~ 72 (203)
|+|+| ++++|++|+.|++|++||+.++ .....+.+|...|.+++|+|+ +.+|++++.|+.|++||+..... .
T Consensus 63 v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 63 VAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp EEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred EEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 46775 4899999999999999999876 356677889999999999998 78999999999999999975322 2
Q ss_pred ceeeecCCCCceeEE-EeeC-----------------CCEEEEEcCCCcEEEEEccCC---ceeeeeccCCCcceEEEEE
Q 028802 73 SDRFVGLSPNSVDAL-LKLD-----------------EDRVITGSENGLISLVGILPN---RIIQPIAEHSEYPIESLAL 131 (203)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~~-----------------~~~l~~~~~dg~v~v~d~~~~---~~~~~~~~~~~~~i~~~~~ 131 (203)
...+.. |...+.++ |+|+ +.+|++++.|+.|++||++.. +++..+.+|.. .|.+++|
T Consensus 143 ~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~-~V~~v~~ 220 (316)
T 3bg1_A 143 KKINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD-WVRDVAW 220 (316)
T ss_dssp CCBTTS-SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS-CEEEEEC
T ss_pred eeeecc-ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC-ceEEEEe
Confidence 344566 78888888 8887 478999999999999999754 46677888865 8999999
Q ss_pred eCCC----CeEEEEeCCCcEEEEeCCCc
Q 028802 132 SHDR----KFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 132 ~~~~----~~l~~~~~d~~i~iwd~~~~ 155 (203)
+|++ .+|++++.|++|++|++.+.
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 9986 78999999999999998763
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=1.3e-25 Score=168.74 Aligned_cols=155 Identities=14% Similarity=0.241 Sum_probs=134.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeE---EEee--cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc-cce
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV---QTRS--EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSD 74 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~---~~~~--~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~ 74 (203)
++|+|++++|++++ ||.|++|++.++.. ...+ ..|...|.+++|+|++++|++++.++.|++||+..... ...
T Consensus 57 ~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee
Confidence 47999999999998 99999999987542 2222 26889999999999999999999999999999975321 445
Q ss_pred eeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 75 RFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
.+.. +...+.++ |+|+++++++++.++.|++||+++++.+..+..|.. .|.+++|+|++++|++++.|+.|++||++
T Consensus 136 ~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 136 ELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp EEEC-SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eccc-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC-ceEEEEECCCCCEEEEEecCCcEEEEECC
Confidence 6677 88889999 999999999999999999999999999999988855 89999999999999999999999999998
Q ss_pred CcccC
Q 028802 154 DILKG 158 (203)
Q Consensus 154 ~~~~~ 158 (203)
++...
T Consensus 214 ~~~~~ 218 (337)
T 1gxr_A 214 EGRQL 218 (337)
T ss_dssp TTEEE
T ss_pred CCceE
Confidence 87644
No 56
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=2e-25 Score=172.60 Aligned_cols=154 Identities=13% Similarity=0.172 Sum_probs=138.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+|+|++++|++|+.||.|++|++.+++.+..+..|...|.+++| ++.+|++++.++.|++||+.........+.. |
T Consensus 140 v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~ 216 (401)
T 4aez_A 140 VKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG-H 216 (401)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-C
T ss_pred EEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcC-C
Confidence 579999999999999999999999999999999999999999999 4679999999999999999865677788888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCe-EEEEe--CCCcEEEEeCCCcc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF-LGSIS--HDSMLKLWDLDDIL 156 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~--~d~~i~iwd~~~~~ 156 (203)
...+.++ |+|++.+|++++.|+.|++||+++++.+..+..|.. .|.+++|+|++.. +++++ .|+.|++||+.++.
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA-AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS-CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc-eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 9999999 999999999999999999999999999988888855 8999999998755 55554 69999999998876
Q ss_pred cC
Q 028802 157 KG 158 (203)
Q Consensus 157 ~~ 158 (203)
..
T Consensus 296 ~~ 297 (401)
T 4aez_A 296 RV 297 (401)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 57
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=4.9e-25 Score=164.51 Aligned_cols=154 Identities=14% Similarity=0.214 Sum_probs=122.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecC-----------------------------------------Cccc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF-----------------------------------------SEEE 39 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----------------------------------------~~~~ 39 (203)
|+|+|++++|++|+.|++|++|++.+++.+..+.+ |...
T Consensus 73 v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (318)
T 4ggc_A 73 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 152 (318)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc
Confidence 47999999999999999999999998776554433 4455
Q ss_pred EEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc---ceee----------------------------------------
Q 028802 40 LTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC---SDRF---------------------------------------- 76 (203)
Q Consensus 40 i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~---------------------------------------- 76 (203)
+..+.+.+++++|++++.|+.|++||+...... ....
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC
T ss_pred eEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc
Confidence 677788888999999999999999998642110 0000
Q ss_pred ----ecCCCCceeEE-EeeCCCEEEEEc--CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEE
Q 028802 77 ----VGLSPNSVDAL-LKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 77 ----~~~~~~~v~~~-~~~~~~~l~~~~--~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
.. +...+..+ |+|.+..+++++ .|+.|++||+++++++..+.+|.. .|++++|+|++++|++++.|++|+|
T Consensus 233 ~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~-~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 233 CLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS-RVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTEEEE
T ss_pred cccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCeEEE
Confidence 01 22334555 788888877654 789999999999999999999965 8999999999999999999999999
Q ss_pred EeCCCcc
Q 028802 150 WDLDDIL 156 (203)
Q Consensus 150 wd~~~~~ 156 (203)
||+....
T Consensus 311 Wd~~~~d 317 (318)
T 4ggc_A 311 WRCFELD 317 (318)
T ss_dssp ECCSCCC
T ss_pred EECCCCC
Confidence 9997653
No 58
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-25 Score=176.05 Aligned_cols=155 Identities=15% Similarity=0.210 Sum_probs=135.1
Q ss_pred CcccccCCEE-EEEcCCCeEEEEEcC--CCeEEEeec--CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc---c
Q 028802 1 MTFAADAMKL-LGTSGDGTLSVCNLR--KNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD---C 72 (203)
Q Consensus 1 l~~sp~~~~l-~~~~~d~~i~v~d~~--~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~---~ 72 (203)
++|+|++++| ++++.|+.|++|++. ++..+..+. .+...|.+++|+|++.+|++++.++.+++|++..... .
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 4799999996 889999999999999 777777765 5668899999999999999999999999999975321 2
Q ss_pred ceeeecCCCCceeEE-EeeC---CCEEEEEcCCCcEEEEEccCCceeee-eccCCCcceEEEEEeCCCCeEEEEeCCCcE
Q 028802 73 SDRFVGLSPNSVDAL-LKLD---EDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDRKFLGSISHDSML 147 (203)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~~---~~~l~~~~~dg~v~v~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 147 (203)
...+.+ |...+.++ |+|+ +.+|++++.|+.|++||+.+++.+.. +.+|.. .|.+++|+ ++++|++++.|+.|
T Consensus 188 ~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~-~v~~~~~s-d~~~l~s~~~d~~v 264 (450)
T 2vdu_B 188 QEPILG-HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH-FVSSICCG-KDYLLLSAGGDDKI 264 (450)
T ss_dssp CCCSEE-CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS-CEEEEEEC-STTEEEEEESSSEE
T ss_pred ceeeec-ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC-ceEEEEEC-CCCEEEEEeCCCeE
Confidence 336778 89999999 9999 99999999999999999999888877 557754 89999999 99999999999999
Q ss_pred EEEeCCCcccC
Q 028802 148 KLWDLDDILKG 158 (203)
Q Consensus 148 ~iwd~~~~~~~ 158 (203)
++||++++...
T Consensus 265 ~vwd~~~~~~~ 275 (450)
T 2vdu_B 265 FAWDWKTGKNL 275 (450)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcEe
Confidence 99999987643
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.5e-26 Score=174.51 Aligned_cols=150 Identities=15% Similarity=0.102 Sum_probs=137.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.|+.|++|++.+++.+..+..|...|.+++|+|++ +|++++.++.|++||+.. +..+..+.. +
T Consensus 253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~-~ 329 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIV-D 329 (425)
T ss_dssp EEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEEC-T
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEeccc-C
Confidence 4789999999999999999999999988888888899999999999999 999999999999999975 567777787 8
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc--------------------eeeeeccCCCc-ceEEEEEeCCCCeE
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNR--------------------IIQPIAEHSEY-PIESLALSHDRKFL 138 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~--------------------~~~~~~~~~~~-~i~~~~~~~~~~~l 138 (203)
...+.++ |+|++++|++++.+|.|++|++.++. .+..+..|... .|.+++|+|++++|
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 409 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI 409 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEE
T ss_pred CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceE
Confidence 8999999 99999999999999999999999887 78888888443 79999999999999
Q ss_pred EEEeCCCcEEEEeCC
Q 028802 139 GSISHDSMLKLWDLD 153 (203)
Q Consensus 139 ~~~~~d~~i~iwd~~ 153 (203)
++++.|+.|++|+++
T Consensus 410 ~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 410 SVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEESSSCCEEEECC
T ss_pred EEEecCceEEEEeec
Confidence 999999999999986
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-26 Score=184.06 Aligned_cols=151 Identities=11% Similarity=0.057 Sum_probs=129.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC-eEEEeecCCcccEEEE--EEeeCC-CEEEEecCCCeEEEEEcCCccccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN-TVQTRSEFSEEELTSV--VLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~l--~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~ 76 (203)
++|+|+ ..|++|+.||+|++||+.++ .+...+.+|...|.++ +|+|++ .+|++++.|++|++||++. ..+...+
T Consensus 272 v~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~ 349 (524)
T 2j04_B 272 FDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTT 349 (524)
T ss_dssp EEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEE
T ss_pred EEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCccccc
Confidence 467875 48999999999999999876 3445678899999999 567887 8999999999999999975 4555556
Q ss_pred ecCCCC--ceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 77 VGLSPN--SVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 77 ~~~~~~--~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
.+ |.. .+.++ |+|++..+++++.++.|++||++++.++.++.+|.. .|++++|+|++++|++|+.|++|++|++.
T Consensus 350 ~~-~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~-~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 350 VS-RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET-TITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EE-ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSS-CEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred cc-ccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCC-ceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 55 543 47778 999999999999999999999999988888888965 89999999999999999999999999986
Q ss_pred Cc
Q 028802 154 DI 155 (203)
Q Consensus 154 ~~ 155 (203)
..
T Consensus 428 ~~ 429 (524)
T 2j04_B 428 RR 429 (524)
T ss_dssp SS
T ss_pred Hh
Confidence 54
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=3.6e-25 Score=169.81 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=132.3
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCeEEEeec---CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceee
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE---FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 76 (203)
++|+| ++++|++++.|+.|++||+.+. .+..+. .+...|.+++|+|++.+|++++.++.|++||+. +..+..+
T Consensus 124 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~ 200 (383)
T 3ei3_B 124 MKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKE 200 (383)
T ss_dssp EEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEE
T ss_pred EEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEe
Confidence 47899 7899999999999999999864 444443 344789999999999999999999999999984 5677888
Q ss_pred ecCCCCceeEE-EeeCCC-EEEEEcCCCcEEEEEccC----CceeeeeccCCCcceEEEEEeC-CCCeEEEEeCCCcEEE
Q 028802 77 VGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILP----NRIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKL 149 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~-~l~~~~~dg~v~v~d~~~----~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i 149 (203)
.. |...+.++ |+|+++ ++++++.|+.|++||+++ +..+..+ .|.. .|.+++|+| ++.+|++++.|+.|++
T Consensus 201 ~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~-~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 201 KL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK-PVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp EC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS-CEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred cc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC-ceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 88 99999999 999999 999999999999999997 5566656 5644 899999999 9999999999999999
Q ss_pred EeCCCcccC
Q 028802 150 WDLDDILKG 158 (203)
Q Consensus 150 wd~~~~~~~ 158 (203)
||+++....
T Consensus 278 wd~~~~~~~ 286 (383)
T 3ei3_B 278 YSSYDWSKP 286 (383)
T ss_dssp EETTBTTSC
T ss_pred EECCCCccc
Confidence 999887654
No 62
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=1.6e-25 Score=174.80 Aligned_cols=156 Identities=12% Similarity=0.216 Sum_probs=136.1
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCC---eEEEeecCCcccEEEEEEeeCCC-EEEEecCCCeEEEEEcCCcccccee
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKN---TVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~ 75 (203)
++|+| ++.+|++++.|+.|++||++++ ..+..+..|...|.+++|+|++. +|++++.+|.|++||++.....+..
T Consensus 237 v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 237 VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 316 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred eEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence 47899 6789999999999999999976 46667778999999999999887 6889999999999999875677888
Q ss_pred eecCCCCceeEE-EeeCCC-EEEEEcCCCcEEEEEccC--------------CceeeeeccCCCcceEEEEEeCCCC-eE
Q 028802 76 FVGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILP--------------NRIIQPIAEHSEYPIESLALSHDRK-FL 138 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~-~l~~~~~dg~v~v~d~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~-~l 138 (203)
+.. |...+.++ |+|++. ++++++.++.|++||+.. ...+..+.+|.. .|.+++|+|+++ +|
T Consensus 317 ~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~l 394 (430)
T 2xyi_A 317 FES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-KISDFSWNPNEPWII 394 (430)
T ss_dssp EEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS-CEEEEEECSSSTTEE
T ss_pred eec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCC-CceEEEECCCCCCEE
Confidence 888 99999999 999985 688999999999999986 356677777754 799999999998 88
Q ss_pred EEEeCCCcEEEEeCCCcccC
Q 028802 139 GSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~~~ 158 (203)
++++.|+.|++|++......
T Consensus 395 ~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 395 CSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp EEEETTSEEEEEEECHHHHC
T ss_pred EEEECCCCEEEeEccccccc
Confidence 99999999999999876654
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=2.9e-25 Score=169.14 Aligned_cols=152 Identities=11% Similarity=0.081 Sum_probs=131.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc--ceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC--SDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~ 76 (203)
++|+|++++|++++.|+.|++|++.+++ .+..+..|...|.+++|+|++++|++++.|+.|++||+... .. ...+
T Consensus 14 ~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~ 92 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR-TWKPTLVI 92 (372)
T ss_dssp EEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT-EEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC-eeeeeEEe
Confidence 5799999999999999999999999887 78888899999999999999999999999999999999643 32 2233
Q ss_pred ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCce---eeee-ccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI---IQPI-AEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~---~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
.. +...+.++ |+|++++|++++.++.|++||+..+.. ...+ ..|.. .|.+++|+|++++|++++.|+.|++||
T Consensus 93 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 93 LR-INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-TVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ec-CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-CeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 55 78889999 999999999999999999999998762 2333 45544 899999999999999999999999999
Q ss_pred CCCc
Q 028802 152 LDDI 155 (203)
Q Consensus 152 ~~~~ 155 (203)
++..
T Consensus 171 ~~~~ 174 (372)
T 1k8k_C 171 AYIK 174 (372)
T ss_dssp CCCT
T ss_pred cccc
Confidence 8643
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=4.6e-25 Score=165.68 Aligned_cols=153 Identities=14% Similarity=0.195 Sum_probs=137.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|++++|++++.|+.|++|++.+++ ....+..|...|.+++|+|++++|++++.++.|++||+.. +.....+..
T Consensus 103 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-~~~~~~~~~ 181 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQG 181 (337)
T ss_dssp EEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-Cceeeeeec
Confidence 4799999999999999999999999876 5667778889999999999999999999999999999975 567777888
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
|...+.++ |+|+++++++++.++.|++||+++++.+..+... . .+.+++|+|++++|++++.++.|++||+++...
T Consensus 182 -~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 182 -HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT-S-QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS-S-CEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred -ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC-C-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 89999999 9999999999999999999999999888777543 4 799999999999999999999999999987654
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.8e-25 Score=167.88 Aligned_cols=155 Identities=10% Similarity=0.169 Sum_probs=139.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCC-CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
++|+|++++|++++.||.|++||+.+ +..+..+..|...|.+++|+|++.+|++++.++.|++||+.. ...+..+.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-- 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST-LQVLKKYE-- 257 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEE--
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC-Cceeeeec--
Confidence 46899999999999999999999998 788888999999999999999999999999999999999975 45555555
Q ss_pred CCCceeEE-EeeCCCEEEEEcCCC--------------cEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC
Q 028802 80 SPNSVDAL-LKLDEDRVITGSENG--------------LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~dg--------------~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 144 (203)
+...+..+ |+|++.++++++.++ .+++||+.+++.+..+.+|.. .|.+++|+|++++|++++.|
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG-PLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETT
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC-cEEEEEECCCCCEEEEEcCC
Confidence 56778888 999999999999888 899999999999999999865 89999999999999999999
Q ss_pred CcEEEEeCCCcccCC
Q 028802 145 SMLKLWDLDDILKGS 159 (203)
Q Consensus 145 ~~i~iwd~~~~~~~~ 159 (203)
|.|++|++.+.....
T Consensus 337 g~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 337 GFIRLHHFEKSYFDF 351 (369)
T ss_dssp SEEEEEEECHHHHTC
T ss_pred CeEEEEECccccchh
Confidence 999999998876443
No 66
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=5.9e-25 Score=165.49 Aligned_cols=150 Identities=17% Similarity=0.221 Sum_probs=125.8
Q ss_pred ccccc--CCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecC
Q 028802 2 TFAAD--AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 2 ~~sp~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
+|+++ ..++++++.|+.|++||+.+++.+..+.+|..+|.+++|+|++++|++++.|+.|++||+.. ...+..+..
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~- 255 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GKHLYTLDG- 255 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEEEC-
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc-CceeeeecC-
Confidence 45554 45788999999999999999999999999999999999999999999999999999999975 456666664
Q ss_pred CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeec---------cCCCcceEEEEEeCCCCeEEEEeCCCcEEE
Q 028802 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA---------EHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
...+.++ |+|++.+ ++++.++.|++||++.+..+..+. .|.. .|++++|+|++++|++++.||.|+|
T Consensus 256 -~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 256 -GDIINALCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-QCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp -SSCEEEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEECCC-------CCCC-CEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -CceEEeeecCCCCce-eeccCCCEEEEEECCCCeEEEeccccceeeeccCCCC-CEEEEEECCCCCEEEEEeCCCEEEE
Confidence 5678888 8887654 566679999999998876665543 4533 7999999999999999999999999
Q ss_pred EeCCCcc
Q 028802 150 WDLDDIL 156 (203)
Q Consensus 150 wd~~~~~ 156 (203)
||++++.
T Consensus 333 W~~~tGt 339 (340)
T 4aow_A 333 WQVTIGT 339 (340)
T ss_dssp EEEEC--
T ss_pred EeCCCcC
Confidence 9998875
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=3.5e-25 Score=168.65 Aligned_cols=156 Identities=16% Similarity=0.129 Sum_probs=133.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc--cceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~ 76 (203)
++|+|++++|++++.|+.|++|++.+++... .+..|...|.+++|+|++++|++++.++.|++||+..... ....+
T Consensus 58 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 58 VDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 4799999999999999999999998886543 3467888999999999999999999999999999975332 12233
Q ss_pred -ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEc------------------cCCceeeeeccCCCcceEEEEEeCCCC
Q 028802 77 -VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGI------------------LPNRIIQPIAEHSEYPIESLALSHDRK 136 (203)
Q Consensus 77 -~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (203)
.. |...+.++ |+|++.++++++.++.|++||+ ..++.+..+..|.. .|.+++|+|+++
T Consensus 138 ~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 215 (372)
T 1k8k_C 138 KKP-IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG-WVHGVCFSANGS 215 (372)
T ss_dssp CTT-CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS-CEEEEEECSSSS
T ss_pred ecc-cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC-eEEEEEECCCCC
Confidence 44 78889999 9999999999999999999995 36778888888855 899999999999
Q ss_pred eEEEEeCCCcEEEEeCCCcccC
Q 028802 137 FLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
+|++++.|+.|++||++++...
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTTEE
T ss_pred EEEEEeCCCEEEEEECCCCcee
Confidence 9999999999999999877543
No 68
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.4e-25 Score=167.76 Aligned_cols=154 Identities=17% Similarity=0.239 Sum_probs=133.8
Q ss_pred Cccccc--CCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcCCcc-ccc
Q 028802 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCS 73 (203)
Q Consensus 1 l~~sp~--~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~-~~~ 73 (203)
|+|+|+ +++|++++.|+.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.++.|++||+.... ...
T Consensus 61 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 61 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE
T ss_pred EEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee
Confidence 468877 8999999999999999999886 67778889999999999999 9999999999999999997542 233
Q ss_pred eeeecCCCCceeEE-Eee-------------CCCEEEEEcCCCcEEEEEccCCc----eeeeeccCCCcceEEEEEeCC-
Q 028802 74 DRFVGLSPNSVDAL-LKL-------------DEDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLALSHD- 134 (203)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~-------------~~~~l~~~~~dg~v~v~d~~~~~----~~~~~~~~~~~~i~~~~~~~~- 134 (203)
..+.. |...+.++ |+| ++.++++++.|+.|++||++++. .+..+..|.. .|.+++|+|+
T Consensus 141 ~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~-~v~~~~~sp~~ 218 (379)
T 3jrp_A 141 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 218 (379)
T ss_dssp EEEEC-CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred EEecC-CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC-cEeEEEECCCC
Confidence 45566 88899999 999 69999999999999999998764 4456777855 8999999999
Q ss_pred --CCeEEEEeCCCcEEEEeCCCcc
Q 028802 135 --RKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 135 --~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
+.+|++++.|+.|++||+++..
T Consensus 219 ~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCCeEEEEeCCCEEEEEeCCCCC
Confidence 8999999999999999998863
No 69
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=1.4e-25 Score=175.02 Aligned_cols=154 Identities=12% Similarity=0.159 Sum_probs=128.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe-----------EEEeecCCc------------ccEEEEEEeeCC--CEEEEe
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-----------VQTRSEFSE------------EELTSVVLMKNG--RKVVCG 55 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~-----------~~~~~~~~~------------~~i~~l~~~~~~--~~l~~~ 55 (203)
|+|+|+|++|++|+.||.|+||++.++. ....+.+|. ..|.+++|+|++ ..|+++
T Consensus 34 v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 34 VEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 5799999999999999999999998766 477888888 889999999998 799999
Q ss_pred cCCCeEEEEEcCCcccc--------------------------------------cee-eecCCCCceeEE-EeeCCCEE
Q 028802 56 SQSGTVLLYSWGYFKDC--------------------------------------SDR-FVGLSPNSVDAL-LKLDEDRV 95 (203)
Q Consensus 56 ~~d~~i~v~d~~~~~~~--------------------------------------~~~-~~~~~~~~v~~~-~~~~~~~l 95 (203)
+.|+.|++|++...... ... ..+ |...|.++ |+|++++|
T Consensus 114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l 192 (447)
T 3dw8_B 114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA-HTYHINSISINSDYETY 192 (447)
T ss_dssp ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC-CSSCCCEEEECTTSSEE
T ss_pred CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC-CCcceEEEEEcCCCCEE
Confidence 99999999998642110 012 246 88899999 99999999
Q ss_pred EEEcCCCcEEEEEccC-Cceee-------eeccCCCcceEEEEEeCCC-CeEEEEeCCCcEEEEeCCCccc
Q 028802 96 ITGSENGLISLVGILP-NRIIQ-------PIAEHSEYPIESLALSHDR-KFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 96 ~~~~~dg~v~v~d~~~-~~~~~-------~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+++ .|+.|++||+++ ++.+. .+..|.. .|.+++|+|++ .+|++++.|+.|++||++++..
T Consensus 193 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 193 LSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE-VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC-CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEe-CCCeEEEEECCCCCceeeeeecccccccccCc-ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 998 799999999984 44444 3557754 89999999998 9999999999999999988764
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=1.7e-25 Score=172.97 Aligned_cols=155 Identities=14% Similarity=0.142 Sum_probs=132.8
Q ss_pred cccccCCEE-EEEcCCCeEEEEEcCCCe----EEEeecCCcccEEEEEEee-CCCEEEEecCCCeEEEEEcCCcc-----
Q 028802 2 TFAADAMKL-LGTSGDGTLSVCNLRKNT----VQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFK----- 70 (203)
Q Consensus 2 ~~sp~~~~l-~~~~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d~~~~~----- 70 (203)
+++|+...+ ++++.+|.|+||++.... .+..+.+|...|.+++|+| ++.+|++++.|+.|++|++....
T Consensus 41 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~ 120 (402)
T 2aq5_A 41 AVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL 120 (402)
T ss_dssp EECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB
T ss_pred EECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc
Confidence 456665544 457889999999996542 2345678999999999999 99999999999999999997542
Q ss_pred -ccceeeecCCCCceeEE-EeeCC-CEEEEEcCCCcEEEEEccCCceeeee--ccCCCcceEEEEEeCCCCeEEEEeCCC
Q 028802 71 -DCSDRFVGLSPNSVDAL-LKLDE-DRVITGSENGLISLVGILPNRIIQPI--AEHSEYPIESLALSHDRKFLGSISHDS 145 (203)
Q Consensus 71 -~~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~dg~v~v~d~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d~ 145 (203)
..+..+.+ |...|.++ |+|++ .+|++++.|+.|++||+.+++.+..+ ..|.. .|.+++|+|++++|++++.|+
T Consensus 121 ~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 121 REPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD-TIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp CSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS-CEEEEEECTTSSCEEEEETTS
T ss_pred CCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC-ceEEEEECCCCCEEEEEecCC
Confidence 45677888 99999999 99998 69999999999999999999999888 77755 899999999999999999999
Q ss_pred cEEEEeCCCcccC
Q 028802 146 MLKLWDLDDILKG 158 (203)
Q Consensus 146 ~i~iwd~~~~~~~ 158 (203)
.|++||++++...
T Consensus 199 ~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 199 RVRVIEPRKGTVV 211 (402)
T ss_dssp EEEEEETTTTEEE
T ss_pred cEEEEeCCCCcee
Confidence 9999999887644
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7e-26 Score=190.92 Aligned_cols=149 Identities=11% Similarity=0.115 Sum_probs=125.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEE----Ee--ec-----CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ----TR--SE-----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~----~~--~~-----~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~ 69 (203)
++|+|++++|++|+.|++|++||+.++... .. +. +|...|.+++|+|++++|++++.|++|++|++...
T Consensus 441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 478999999999999999999999876321 11 11 78889999999999999999999999999999643
Q ss_pred c--------------------------------------------ccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcE
Q 028802 70 K--------------------------------------------DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLI 104 (203)
Q Consensus 70 ~--------------------------------------------~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v 104 (203)
. .++..+.+ |...|+++ |+|+| +|++|+.|+.|
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h~~~V~svafSpdG-~lAsgs~D~tv 598 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-NKGKTSAINNSNIG-FVGIAYAAGSL 598 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-CSCSEEEEEECBTS-EEEEEETTSEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc-CCCcEEEEEecCCc-EEEEEeCCCcE
Confidence 1 12456777 89999999 99999 99999999999
Q ss_pred EEEEccCCceee-----eec-cCCCcceEEEEEe-----CCC---CeEEEEeCCCcEEEEeC
Q 028802 105 SLVGILPNRIIQ-----PIA-EHSEYPIESLALS-----HDR---KFLGSISHDSMLKLWDL 152 (203)
Q Consensus 105 ~v~d~~~~~~~~-----~~~-~~~~~~i~~~~~~-----~~~---~~l~~~~~d~~i~iwd~ 152 (203)
++||+++...+. .+. +|.. .|++++|+ ||| ++|++++.|++|++||+
T Consensus 599 ~lwd~~~~~~~~~~~~~~~~~gh~~-~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 599 MLIDRRGPAIIYMENIREISGAQSA-CVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEETTTTEEEEEEEGGGTCSSCCC-CEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEECCCCeEEEEeehhHhcccccc-ceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 999998776553 232 6754 89999999 886 89999999999999999
No 72
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.8e-25 Score=165.69 Aligned_cols=152 Identities=13% Similarity=0.058 Sum_probs=124.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcC---------CCeEEEeec-CCcccEEEEEEee--CCCEEEEecCCCeEEEEEcCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLR---------KNTVQTRSE-FSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGY 68 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~---------~~~~~~~~~-~~~~~i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~ 68 (203)
+.|+|+ +++++.|++|++|+.. +++.+..+. .|..+|.+++|+| ++++|++++.|+.|++||+..
T Consensus 82 ~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~ 158 (343)
T 3lrv_A 82 GGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED 158 (343)
T ss_dssp TCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS
T ss_pred eeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC
Confidence 356776 8999999999999765 444344443 5668899999999 999999999999999999985
Q ss_pred ccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCcee-eeecc-CCCcceEEEEEeCCCCeEEEEeCCC
Q 028802 69 FKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRII-QPIAE-HSEYPIESLALSHDRKFLGSISHDS 145 (203)
Q Consensus 69 ~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~ 145 (203)
+.........+...+.++ |+|++.+|++|+.||.|++||+++++.+ ..+.. |.. +|.+++|+|++.+|++++ ++
T Consensus 159 -~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~-~v~~l~fs~~g~~l~s~~-~~ 235 (343)
T 3lrv_A 159 -DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA-KIKEVKFADNGYWMVVEC-DQ 235 (343)
T ss_dssp -SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS-CEEEEEECTTSSEEEEEE-SS
T ss_pred -CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC-CEEEEEEeCCCCEEEEEe-CC
Confidence 344444433145578899 9999999999999999999999999877 77877 755 899999999999999999 55
Q ss_pred cEEEEeCCCcccC
Q 028802 146 MLKLWDLDDILKG 158 (203)
Q Consensus 146 ~i~iwd~~~~~~~ 158 (203)
.|++||+++....
T Consensus 236 ~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 236 TVVCFDLRKDVGT 248 (343)
T ss_dssp BEEEEETTSSTTC
T ss_pred eEEEEEcCCCCcc
Confidence 9999999987654
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=4.5e-25 Score=167.07 Aligned_cols=151 Identities=15% Similarity=0.202 Sum_probs=128.5
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEee---CCCEEEEecCCCeEEEEEcCCccccceeee-
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDCSDRFV- 77 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~- 77 (203)
+|+|++++|++++.|+.|++||+.+++.... ..|...|.+++|+| ++.+|++++.++.|++||+.. ......+.
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~ 252 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT-QHPTKGFAS 252 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE-EETTTEEEE
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC-CCcccceee
Confidence 4889999999999999999999999877544 55788999999999 999999999999999999975 34444443
Q ss_pred ----cCCCCceeEE-EeeCCC-EEEEEcCCCcEEEEEccCC-------------------ceeeeeccCCCcceEEEEEe
Q 028802 78 ----GLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPN-------------------RIIQPIAEHSEYPIESLALS 132 (203)
Q Consensus 78 ----~~~~~~v~~~-~~~~~~-~l~~~~~dg~v~v~d~~~~-------------------~~~~~~~~~~~~~i~~~~~~ 132 (203)
. |...+.++ |+|++. ++++++.||.|++||++.+ +.+..+..|.. .|.+++|+
T Consensus 253 ~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~v~~~~~s 330 (357)
T 3i2n_A 253 VSEKA-HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ-PISSLDWS 330 (357)
T ss_dssp EEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS-CEEEEEEC
T ss_pred eccCC-CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC-CeeEEEEc
Confidence 7 89999999 999998 8999999999999999854 35666778855 89999999
Q ss_pred CCCCeEE-EEeCCCcEEEEeCCCcc
Q 028802 133 HDRKFLG-SISHDSMLKLWDLDDIL 156 (203)
Q Consensus 133 ~~~~~l~-~~~~d~~i~iwd~~~~~ 156 (203)
|++++|+ +++.|+.|++|++.+..
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999998 79999999999998653
No 74
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.6e-25 Score=167.25 Aligned_cols=154 Identities=12% Similarity=0.119 Sum_probs=124.0
Q ss_pred Ccccc--cCCEEEEEcCCCeEEEEEcCCCeEEEeec-CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee
Q 028802 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (203)
Q Consensus 1 l~~sp--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 77 (203)
|+|+| ++++|++++.|++|++||+.+++...... .+...+.+++|+|++.+|++|+.|+.|++||++........+.
T Consensus 131 ~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 210 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP 210 (343)
T ss_dssp EECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred EEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence 46899 99999999999999999999988866654 4455799999999999999999999999999986433314444
Q ss_pred cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeecc---CCCcceE--EEEEeCCCCeEEEEeC-CCcEEEE
Q 028802 78 GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE---HSEYPIE--SLALSHDRKFLGSISH-DSMLKLW 150 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~---~~~~~i~--~~~~~~~~~~l~~~~~-d~~i~iw 150 (203)
..|...|.++ |+|++.+|++++ ++.|++||+++++.+..+.. |. ..+. +++|+|++++|++++. |+.|++|
T Consensus 211 ~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 211 VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPE-FKTGTVTYDIDDSGKNMIAYSNESNSLTIY 288 (343)
T ss_dssp CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC------CCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccccc-ccccceEEEECCCCCEEEEecCCCCcEEEE
Confidence 2278899999 999999999999 55999999998877655543 21 1333 6999999999999998 9999999
Q ss_pred eCCCcc
Q 028802 151 DLDDIL 156 (203)
Q Consensus 151 d~~~~~ 156 (203)
++.+..
T Consensus 289 ~~~~~~ 294 (343)
T 3lrv_A 289 KFDKKT 294 (343)
T ss_dssp EECTTT
T ss_pred EEcccc
Confidence 986543
No 75
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-25 Score=179.01 Aligned_cols=155 Identities=12% Similarity=0.028 Sum_probs=129.6
Q ss_pred Cccccc------CCEEEEEcCCCeEEEEEcCCCeE-----------EEeecCCcccEEEEEEeeCCCEEEEecCCCeEEE
Q 028802 1 MTFAAD------AMKLLGTSGDGTLSVCNLRKNTV-----------QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (203)
Q Consensus 1 l~~sp~------~~~l~~~~~d~~i~v~d~~~~~~-----------~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v 63 (203)
|+|+|+ +.+||+++.||+|++|++.++.. ...+.+|...|.+++|+++ ..|++|+.||+|++
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~l 291 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAE 291 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEE
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEE
Confidence 468876 67999999999999999976531 2356788899999999986 48999999999999
Q ss_pred EEcCCccccceeeecCCCCceeEE---EeeCC-CEEEEEcCCCcEEEEEccCCceeeeeccCCC-cceEEEEEeCCCCeE
Q 028802 64 YSWGYFKDCSDRFVGLSPNSVDAL---LKLDE-DRVITGSENGLISLVGILPNRIIQPIAEHSE-YPIESLALSHDRKFL 138 (203)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~~~v~~~---~~~~~-~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l 138 (203)
||+.....+...+.. |...|.++ |+|++ .+|++++.|++|+|||+++++++.++.+|.. ..|.+++|+|+++.|
T Consensus 292 WD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 292 FDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 999854445566788 99999988 36777 8999999999999999998887777766642 247889999999999
Q ss_pred EEEeCCCcEEEEeCCCccc
Q 028802 139 GSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~~ 157 (203)
++++.|++|++||++++..
T Consensus 371 ~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEECSSSEEEEEETTCTTC
T ss_pred EEeCCCCcEEEEECccccc
Confidence 9999999999999988654
No 76
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-24 Score=164.96 Aligned_cols=155 Identities=14% Similarity=0.155 Sum_probs=135.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC-----CeEEEEEcCCccc----
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFKD---- 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~---- 71 (203)
++|+|++++|++++.|+.|++||+.+++.+..+. +...+.+++|+|++.+|++++.+ +.|++||+.....
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 80 IDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 4799999999999999999999999998888877 78889999999999999999998 9999999975321
Q ss_pred ------cceeeecCCCC--ceeEE-EeeCCCEEEEEcCCCcEEEEEccC-CceeeeeccCCCcceEEEEEeCCCCeEEEE
Q 028802 72 ------CSDRFVGLSPN--SVDAL-LKLDEDRVITGSENGLISLVGILP-NRIIQPIAEHSEYPIESLALSHDRKFLGSI 141 (203)
Q Consensus 72 ------~~~~~~~~~~~--~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 141 (203)
....+.. +.. .+.++ |+|+++++++++.+|.|++||+++ +..+..+..|.. .|.+++|+|++++|+++
T Consensus 159 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~ 236 (369)
T 3zwl_B 159 TKVSEEPIHKIIT-HEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK-SISDMQFSPDLTYFITS 236 (369)
T ss_dssp EEECSSCSEEEEC-CTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS-CEEEEEECTTSSEEEEE
T ss_pred cccccceeeeccC-CcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC-ceeEEEECCCCCEEEEe
Confidence 2233344 444 78888 999999999999999999999998 778888888855 89999999999999999
Q ss_pred eCCCcEEEEeCCCcccC
Q 028802 142 SHDSMLKLWDLDDILKG 158 (203)
Q Consensus 142 ~~d~~i~iwd~~~~~~~ 158 (203)
+.|+.|++||++++...
T Consensus 237 ~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 237 SRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp ETTSEEEEEETTTCCEE
T ss_pred cCCceEEEEECCCCcee
Confidence 99999999999887544
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=1.3e-25 Score=170.36 Aligned_cols=152 Identities=13% Similarity=0.160 Sum_probs=133.0
Q ss_pred Cccccc----CCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEee-CCCEEEEecCCCeEEEEEcCCcccccee
Q 028802 1 MTFAAD----AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 1 l~~sp~----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 75 (203)
++|+|+ +++|++|+.||.|++||+.+++.+..+..|...|.+++|+| ++.+|++++.|+.|++||+.. +..+..
T Consensus 75 ~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~ 153 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-DTLVAI 153 (366)
T ss_dssp EEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT-TEEEEE
T ss_pred EEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec-CeEEEE
Confidence 468888 67999999999999999999999999999999999999999 899999999999999999975 455555
Q ss_pred e---ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeecc----------------------------CCC
Q 028802 76 F---VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE----------------------------HSE 123 (203)
Q Consensus 76 ~---~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~----------------------------~~~ 123 (203)
+ .. |...+.++ |+|++.+|++++.||.|++||+++++.+..+.. |..
T Consensus 154 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 154 FGGVEG-HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp ECSTTS-CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred eccccc-ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 5 56 88999999 999999999999999999999987765444332 644
Q ss_pred cceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 124 YPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 124 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
.|.+++|+ +.+|++++.|+.|++||+.+...
T Consensus 233 -~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 233 -YVDCVRWL--GDLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp -CCCEEEEE--TTEEEEECSSSEEEEEEESSTTC
T ss_pred -eEEEEEEc--CCEEEEEecCCEEEEEeCCCccc
Confidence 89999998 77999999999999999987654
No 78
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=8.4e-25 Score=165.96 Aligned_cols=110 Identities=13% Similarity=0.173 Sum_probs=96.0
Q ss_pred Cccccc---CCEEEEEcCCCeEEEEEcCC-CeEE-EeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccccee
Q 028802 1 MTFAAD---AMKLLGTSGDGTLSVCNLRK-NTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 1 l~~sp~---~~~l~~~~~d~~i~v~d~~~-~~~~-~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 75 (203)
|+|+|+ |++|++|+.||.|++|++.+ +..+ ..+..|...|.+++|+|++++|++++.|+.|++||+.. +... .
T Consensus 45 ~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~-~ 122 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS-NQAI-Q 122 (368)
T ss_dssp EEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEE-E
T ss_pred EEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC-CCce-e
Confidence 579998 69999999999999999987 4444 67788999999999999999999999999999999975 3433 4
Q ss_pred eecCCCCceeEE-E--eeCCCEEEEEcCCCcEEEEEccCCc
Q 028802 76 FVGLSPNSVDAL-L--KLDEDRVITGSENGLISLVGILPNR 113 (203)
Q Consensus 76 ~~~~~~~~v~~~-~--~~~~~~l~~~~~dg~v~v~d~~~~~ 113 (203)
+.. |...+.++ | +|++.+|++++.|+.|++||+++++
T Consensus 123 ~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 123 IAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 566 89999999 8 8899999999999999999987654
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=6.5e-25 Score=166.58 Aligned_cols=154 Identities=14% Similarity=0.223 Sum_probs=132.1
Q ss_pred Cccccc----CCEEEEEcCCCeEEEEEcCCCeEEEeecC-----CcccEEEEEEeeC----CCEEEEecCCCeEEEEEcC
Q 028802 1 MTFAAD----AMKLLGTSGDGTLSVCNLRKNTVQTRSEF-----SEEELTSVVLMKN----GRKVVCGSQSGTVLLYSWG 67 (203)
Q Consensus 1 l~~sp~----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-----~~~~i~~l~~~~~----~~~l~~~~~d~~i~v~d~~ 67 (203)
|+|+|+ ...+++++.++.|++|++.+++.+..+.. |...|.+++|+|+ +.+|++++.++.|++||+.
T Consensus 24 i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~ 103 (366)
T 3k26_A 24 VQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI 103 (366)
T ss_dssp EEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT
T ss_pred EEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch
Confidence 468874 45666666678999999997765555542 5578999999998 6799999999999999997
Q ss_pred CccccceeeecCCCCceeEE-Eee-CCCEEEEEcCCCcEEEEEccCCceeeee---ccCCCcceEEEEEeCCCCeEEEEe
Q 028802 68 YFKDCSDRFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPI---AEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 68 ~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
. +..+..+.. |...|.++ |+| ++.+|++++.||.|++||+++++.+..+ ..|.. .|.+++|+|++++|++++
T Consensus 104 ~-~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 104 T-MQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD-EVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp T-CCEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS-CEEEEEECTTSSEEEEEE
T ss_pred h-ceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC-ceeEEEECCCCCEEEEec
Confidence 5 577788888 99999999 999 9999999999999999999999888887 56744 899999999999999999
Q ss_pred CCCcEEEEeCCCccc
Q 028802 143 HDSMLKLWDLDDILK 157 (203)
Q Consensus 143 ~d~~i~iwd~~~~~~ 157 (203)
.|+.|++||+++...
T Consensus 181 ~dg~i~i~d~~~~~~ 195 (366)
T 3k26_A 181 MDHSLKLWRINSKRM 195 (366)
T ss_dssp TTSCEEEEESCSHHH
T ss_pred CCCCEEEEECCCCcc
Confidence 999999999988754
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=2.5e-24 Score=165.53 Aligned_cols=152 Identities=13% Similarity=0.117 Sum_probs=127.5
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCC-EEEEecCCCeEEEEEcCCccccceee--------
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRF-------- 76 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~-------- 76 (203)
++.++++++.++.|++||+.++..+..+..|...|.+++|+|++. .|++++.++.|++||++.....+..+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 566999999999999999999988889999999999999999998 58899999999999997644333333
Q ss_pred -------ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc-----------------------------------
Q 028802 77 -------VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR----------------------------------- 113 (203)
Q Consensus 77 -------~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~----------------------------------- 113 (203)
.. |...+.++ |+|++.+|++++.|+.|++||+.+++
T Consensus 235 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 235 QAVESANTA-HNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp CCTTTSSCS-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred eeecccccc-ccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 45 77889999 99999999999999999999987543
Q ss_pred ------------eeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 114 ------------IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 114 ------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
.+..+.+|.. .|.+++|+|++++|++++.||.|++|++.+.++..
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHYK-TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCSS-CEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred CEEEEEECcCCcceeeeccCCC-eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 3445566744 89999999999999999999999999999876543
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=2.7e-24 Score=168.82 Aligned_cols=154 Identities=20% Similarity=0.272 Sum_probs=134.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEee--CCCEEEEecCCCeEEEEEcCCcccc------
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDC------ 72 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~------ 72 (203)
++|+|++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|++ ++.+|++++.|+.|++||+......
T Consensus 168 l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 168 LKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp EEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------
T ss_pred EEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 4688877 899999999999999999999999999999999999995 7789999999999999999753221
Q ss_pred ----------------ceeeecCCCCceeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC
Q 028802 73 ----------------SDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK 136 (203)
Q Consensus 73 ----------------~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (203)
...+.+ |...+.++ ++++.++++++.|+.|++||+++++++..+.+|.. .|.+++|+|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 323 (464)
T 3v7d_B 247 HDYPLVFHTPEENPYFVGVLRG-HMASVRTV-SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD-RIYSTIYDHERK 323 (464)
T ss_dssp CCSSEEESCGGGCTTEEEEECC-CSSCEEEE-EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEETTTT
T ss_pred CCcceEeeccCCCeEEEEEccC-ccceEEEE-cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-CEEEEEEcCCCC
Confidence 334455 66666665 78899999999999999999999999999998865 899999999999
Q ss_pred eEEEEeCCCcEEEEeCCCcccC
Q 028802 137 FLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
+|++++.|+.|++||++++...
T Consensus 324 ~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeCCCcEEEEECCCCcEE
Confidence 9999999999999999887654
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=7.4e-25 Score=182.44 Aligned_cols=156 Identities=17% Similarity=0.202 Sum_probs=141.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.||.|++|++.+++.+..+..|...|.+++|+|++.+|++++.|+.|++|++.........+.. |
T Consensus 61 ~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~ 139 (814)
T 3mkq_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-H 139 (814)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-C
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-C
Confidence 479999999999999999999999999999999999999999999999999999999999999999865466677888 9
Q ss_pred CCceeEE-Eee-CCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeC--CCCeEEEEeCCCcEEEEeCCCcc
Q 028802 81 PNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH--DRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 81 ~~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
...+.++ |+| ++..+++++.+|.|++||+.++.....+..+....+.+++|+| ++.+|++++.|+.|++||+.++.
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 9999999 999 8899999999999999999988877777666534899999999 99999999999999999998765
Q ss_pred c
Q 028802 157 K 157 (203)
Q Consensus 157 ~ 157 (203)
.
T Consensus 220 ~ 220 (814)
T 3mkq_A 220 C 220 (814)
T ss_dssp E
T ss_pred E
Confidence 4
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.9e-24 Score=159.14 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=132.0
Q ss_pred cccc-cCCEEEEEcCCCeEEEEEcCCCeEEEeecC-CcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecC
Q 028802 2 TFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 2 ~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
+|+| ++++|++++.|+.|++|| .......+.. |...+.+++|+|++. +++++.++.|++||+.. +..+..+..
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~-~~~~~~~~~- 223 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT-GDVLRTYEG- 223 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT-CCEEEEEEC-
T ss_pred EEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc-hhhhhhhhc-
Confidence 4666 899999999999999999 4456666666 889999999999988 89999999999999975 577788888
Q ss_pred CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
|...+.++ |+|++ .+++++.+|.|++||+.+++.+..+..|.. .|.+++|+|+++ +++++.|+.|++|++.+....
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI-SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS-CEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc-eEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 99999999 99999 688999999999999999999999988855 899999999998 667889999999999887654
Q ss_pred C
Q 028802 159 S 159 (203)
Q Consensus 159 ~ 159 (203)
.
T Consensus 301 ~ 301 (313)
T 3odt_A 301 S 301 (313)
T ss_dssp C
T ss_pred e
Confidence 3
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1.1e-24 Score=168.35 Aligned_cols=154 Identities=14% Similarity=0.222 Sum_probs=130.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCC-CEEEEec--CCCeEEEEEcCCccccceeee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGS--QSGTVLLYSWGYFKDCSDRFV 77 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~--~d~~i~v~d~~~~~~~~~~~~ 77 (203)
++|+|++++|++++.|+.|++||+.++..+..+..|...|.+++|+|++ .++++++ .|+.|++||+.. +..+..+.
T Consensus 223 ~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~ 301 (401)
T 4aez_A 223 LAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD 301 (401)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe
Confidence 4799999999999999999999999998988999999999999999976 5566654 799999999975 46666665
Q ss_pred cCCCCceeEE-EeeCCCEEEE--EcCCCcEEEEEccCCceee--eeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeC
Q 028802 78 GLSPNSVDAL-LKLDEDRVIT--GSENGLISLVGILPNRIIQ--PIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~--~~~dg~v~v~d~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (203)
+...+.++ |+|++.++++ |+.+|.|++|++.++.... .+.+|.. .|.+++|+|++++|++++.|+.|++|++
T Consensus 302 --~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 302 --AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDT-RVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp --CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSS-CCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred --CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCC-CEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 56788999 9999999999 4489999999999865544 3567754 8999999999999999999999999999
Q ss_pred CCcccC
Q 028802 153 DDILKG 158 (203)
Q Consensus 153 ~~~~~~ 158 (203)
.++...
T Consensus 379 ~~~~~~ 384 (401)
T 4aez_A 379 YDGDHV 384 (401)
T ss_dssp CC----
T ss_pred CCCccc
Confidence 887654
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=9.5e-25 Score=170.27 Aligned_cols=154 Identities=12% Similarity=0.216 Sum_probs=128.8
Q ss_pred CcccccC--CEEEEEcCCCeEEEEEcCCCeEE---------------------------------------Ee-ecCCcc
Q 028802 1 MTFAADA--MKLLGTSGDGTLSVCNLRKNTVQ---------------------------------------TR-SEFSEE 38 (203)
Q Consensus 1 l~~sp~~--~~l~~~~~d~~i~v~d~~~~~~~---------------------------------------~~-~~~~~~ 38 (203)
|+|+|++ .+|++++.|++|++|++.++... .. ..+|..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 4799998 79999999999999998764331 12 357899
Q ss_pred cEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccce-------eeecCCCCceeEE-EeeCC-CEEEEEcCCCcEEEEEc
Q 028802 39 ELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD-------RFVGLSPNSVDAL-LKLDE-DRVITGSENGLISLVGI 109 (203)
Q Consensus 39 ~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-------~~~~~~~~~v~~~-~~~~~-~~l~~~~~dg~v~v~d~ 109 (203)
.|.+++|+|++++|+++ .|+.|++||+......+. .+.. |...+.++ |+|++ .+|++++.||.|++||+
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 99999999999999998 799999999974444443 3556 88899999 99998 99999999999999999
Q ss_pred cCCce----eeeeccCCC-----------cceEEEEEeCCCCeEEEEeCCCcEEEEeCCC-ccc
Q 028802 110 LPNRI----IQPIAEHSE-----------YPIESLALSHDRKFLGSISHDSMLKLWDLDD-ILK 157 (203)
Q Consensus 110 ~~~~~----~~~~~~~~~-----------~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~ 157 (203)
++++. +..+..|.. ..|.+++|+|++++|++++. +.|++||+++ ..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP 319 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc
Confidence 98876 677777743 27999999999999999998 9999999987 443
No 86
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=2.3e-24 Score=177.34 Aligned_cols=155 Identities=22% Similarity=0.308 Sum_probs=132.0
Q ss_pred CcccccC-CEEEEEcCCCeEEEEEcCC-----CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccce
Q 028802 1 MTFAADA-MKLLGTSGDGTLSVCNLRK-----NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~-~~l~~~~~d~~i~v~d~~~-----~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 74 (203)
|+|+|++ ++|++|+.|++|++|++.+ +.....+.+|...|.+++|+|++++|++++.|+.|++||+.. +....
T Consensus 388 v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~-~~~~~ 466 (694)
T 3dm0_A 388 IATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA-GVSTR 466 (694)
T ss_dssp EECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEE
T ss_pred EEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC-Cccee
Confidence 4678764 7999999999999999875 345567889999999999999999999999999999999975 56777
Q ss_pred eeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeee---ccCCCcceEEEEEeCCC--CeEEEEeCCCcEE
Q 028802 75 RFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI---AEHSEYPIESLALSHDR--KFLGSISHDSMLK 148 (203)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~---~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~ 148 (203)
.+.+ |...|.++ |+|++.+|++++.|+.|++||+......... .+|.. .|.+++|+|++ ..|++++.|+.|+
T Consensus 467 ~~~~-h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 467 RFVG-HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD-WVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS-CEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred EEeC-CCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC-cEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 8888 99999999 9999999999999999999998654333222 35544 79999999987 5799999999999
Q ss_pred EEeCCCcccC
Q 028802 149 LWDLDDILKG 158 (203)
Q Consensus 149 iwd~~~~~~~ 158 (203)
+||+++....
T Consensus 545 vwd~~~~~~~ 554 (694)
T 3dm0_A 545 VWNLSNCKLR 554 (694)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 9999876543
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=2.2e-24 Score=167.74 Aligned_cols=153 Identities=14% Similarity=0.188 Sum_probs=128.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe----EEEeecCCcccEEEEEEeeCC-CEEEE--ecCCCeEEEEEcCCccccc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT----VQTRSEFSEEELTSVVLMKNG-RKVVC--GSQSGTVLLYSWGYFKDCS 73 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~l~~~~~~-~~l~~--~~~d~~i~v~d~~~~~~~~ 73 (203)
+.|+|+++++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+ ..+++ |+.|+.|++||+.+ +.+.
T Consensus 236 ~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~ 314 (420)
T 4gga_A 236 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACL 314 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEE
T ss_pred eeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccc
Confidence 3588999999999999999999998753 345667788999999999965 45554 45799999999975 5666
Q ss_pred eeeecCCCCceeEE-EeeCCCEEEEEc--CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEE
Q 028802 74 DRFVGLSPNSVDAL-LKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLW 150 (203)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~~~~l~~~~--~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw 150 (203)
..+.. + ..+.++ |+|++..+++++ .|+.|++||+.+++++..+.+|.. .|.+++|+|+|++|++++.|++|+||
T Consensus 315 ~~~~~-~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~-~V~~l~~spdg~~l~S~s~D~tvriW 391 (420)
T 4gga_A 315 SAVDA-H-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS-RVLSLTMSPDGATVASAAADETLRLW 391 (420)
T ss_dssp EEEEC-S-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred eeecc-c-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 66665 4 455556 999999988765 689999999999999999999965 89999999999999999999999999
Q ss_pred eCCCccc
Q 028802 151 DLDDILK 157 (203)
Q Consensus 151 d~~~~~~ 157 (203)
|+....+
T Consensus 392 dv~~~~~ 398 (420)
T 4gga_A 392 RCFELDP 398 (420)
T ss_dssp CCSCSSC
T ss_pred ECCCCCc
Confidence 9976543
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=2.4e-24 Score=168.05 Aligned_cols=153 Identities=16% Similarity=0.215 Sum_probs=131.7
Q ss_pred CcccccCC-EEEEEcCCCeEEEEEcCCCeE-------EEeecCCcccEEEEEEee-CCCEEEEecCCCeEEEEEcCCcc-
Q 028802 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTV-------QTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFK- 70 (203)
Q Consensus 1 l~~sp~~~-~l~~~~~d~~i~v~d~~~~~~-------~~~~~~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d~~~~~- 70 (203)
|+|+|++. +|++|+.||.|++|++..+.. ...+..|...|.+++|+| ++.+|++++.++.|++||++...
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 57999988 999999999999999987321 345668899999999999 67899999999999999998642
Q ss_pred -ccceeeecCCCCceeEE-EeeCCC-EEEEEcCCCcEEEEEccC-CceeeeeccCCCcceEEEEEeCCCC-eEEEEeCCC
Q 028802 71 -DCSDRFVGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILP-NRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDS 145 (203)
Q Consensus 71 -~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~dg~v~v~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~ 145 (203)
..+..+.. |...+.++ |+|++. ++++++.+|.|++||++. +.++..+..|.. .|.+++|+|++. +|++++.|+
T Consensus 267 ~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~-~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 267 SKPSHTVDA-HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD-EIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp SSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS-CEEEEEECSSCTTEEEEEETTS
T ss_pred CcceeEeec-CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC-CEEEEEECCCCCCEEEEEeCCC
Confidence 45666777 89999999 999887 688999999999999997 567788888855 899999999985 588999999
Q ss_pred cEEEEeCCCc
Q 028802 146 MLKLWDLDDI 155 (203)
Q Consensus 146 ~i~iwd~~~~ 155 (203)
.|++||+...
T Consensus 345 ~i~iwd~~~~ 354 (430)
T 2xyi_A 345 RLHVWDLSKI 354 (430)
T ss_dssp CCEEEEGGGT
T ss_pred cEEEEeCCCC
Confidence 9999999873
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.4e-25 Score=171.58 Aligned_cols=156 Identities=10% Similarity=0.140 Sum_probs=126.0
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCC---Ce---EEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCC--ccc
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRK---NT---VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY--FKD 71 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~---~~---~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~--~~~ 71 (203)
|+|+| ++++|++|+.||+|++||+.+ +. ....+ .|...|.+++|+|++.+|++++.|+.|++||+.. .+.
T Consensus 69 ~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp EEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETT
T ss_pred EEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCc
Confidence 57999 999999999999999999876 43 12222 4789999999999999999999999999999941 223
Q ss_pred cceeeec---------C--CCCceeEE---EeeCCCEEEEEcCCCcEEEEEccCCceeeeecc--CCCcceEEEEEeCCC
Q 028802 72 CSDRFVG---------L--SPNSVDAL---LKLDEDRVITGSENGLISLVGILPNRIIQPIAE--HSEYPIESLALSHDR 135 (203)
Q Consensus 72 ~~~~~~~---------~--~~~~v~~~---~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~ 135 (203)
....+.. . +...+.++ +++++.++++++.++.|++||+++++++..+.. |.. .|++++|+|++
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~-~v~~~~~s~~~ 226 (437)
T 3gre_A 148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG-AVSSICIDEEC 226 (437)
T ss_dssp EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC-CEEEEEECTTS
T ss_pred eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC-ceEEEEECCCC
Confidence 3222221 0 12334444 357899999999999999999999999999887 644 89999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCcccC
Q 028802 136 KFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 136 ~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
++|++++.|+.|++||++++...
T Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 227 CVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp CEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEcCCCeEEEEEcCCccEE
Confidence 99999999999999999886653
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1e-24 Score=183.87 Aligned_cols=152 Identities=16% Similarity=0.137 Sum_probs=131.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccc-------
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS------- 73 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~------- 73 (203)
|+|+| +++|++++.|++|++||+.+++.+..+. |...|++++|+|++++|++|+.||.|++||+... ...
T Consensus 64 l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~-~~~~~~i~~~ 140 (902)
T 2oaj_A 64 MRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD-QLSSFKLDNL 140 (902)
T ss_dssp EEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT-EEEEEEECCH
T ss_pred EEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC-ccccceeccc
Confidence 57999 8899999999999999999998887776 5678999999999999999999999999999753 221
Q ss_pred ----eeeecCCCCceeEE-EeeC-CCEEEEEcCCCcEEEEEccCCceeeeeccC-----------------CCcceEEEE
Q 028802 74 ----DRFVGLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEH-----------------SEYPIESLA 130 (203)
Q Consensus 74 ----~~~~~~~~~~v~~~-~~~~-~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~-----------------~~~~i~~~~ 130 (203)
..+.+ |...|.++ |+|+ +..+++++.++.| +||+++++++..+..| ....|.+++
T Consensus 141 ~~~~~~~~~-h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 141 QKSSFFPAA-RLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp HHHHTCSSS-CCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred ccccccccc-CCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 23456 78899999 9996 5789999999999 9999999888777655 013699999
Q ss_pred EeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 131 LSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 131 ~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
|+|+|++|++++.|+.|++||++++.+
T Consensus 219 fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 219 YHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp ECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 999999999999999999999988654
No 91
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.1e-24 Score=172.38 Aligned_cols=147 Identities=14% Similarity=0.101 Sum_probs=121.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcc-----cEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc----
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-----ELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD---- 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-----~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~---- 71 (203)
++|||+|++||+++.||+|++|+..+ ++..+. |.. .+.+++|+|+|++|++|+.||+|++||+.....
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 58999999999999999999999544 666666 554 499999999999999999999999999975321
Q ss_pred --cceee----ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCce---eeee-ccCCCcceEEEEEeCCCCeEEE
Q 028802 72 --CSDRF----VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI---IQPI-AEHSEYPIESLALSHDRKFLGS 140 (203)
Q Consensus 72 --~~~~~----~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~---~~~~-~~~~~~~i~~~~~~~~~~~l~~ 140 (203)
.+..+ .+ |...|.++ |+|+| +++++.|+.|++|++..+.. ..++ .+|. ..|.+++|+ |++||+
T Consensus 168 ~i~l~ti~~~~~g-h~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~-~~V~svaFs--g~~LAS 241 (588)
T 2j04_A 168 FYFESSIRLSDAG-SKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASR-RKITDLKIV--DYKVVL 241 (588)
T ss_dssp CEEEEEEECSCTT-CCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCS-SCCCCEEEE--TTEEEE
T ss_pred ceeeeeeeccccc-ccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccccc-CcEEEEEEE--CCEEEE
Confidence 24555 45 66799999 99999 88889999999999987763 2455 3563 479999999 689998
Q ss_pred EeCCCcEEEEeCCCccc
Q 028802 141 ISHDSMLKLWDLDDILK 157 (203)
Q Consensus 141 ~~~d~~i~iwd~~~~~~ 157 (203)
++ ++.|++||+.+...
T Consensus 242 a~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 242 TC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp EC-SSEEEEEETTTTEE
T ss_pred Ee-CCeEEEEECCCCeE
Confidence 87 69999999988766
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-24 Score=167.40 Aligned_cols=154 Identities=10% Similarity=0.215 Sum_probs=133.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCC----CeEEEeecCCcccEEEEEEeeC-CCEEEEecCCCeEEEEEcCCcc-----
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWGYFK----- 70 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~d~~i~v~d~~~~~----- 70 (203)
++|+|++++|++++.|+.|++|++.+ ...+..+..|...|.+++|+|+ +.+|++++.|+.|++||+....
T Consensus 73 ~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 47999999999999999999999987 3577888899999999999998 8999999999999999997543
Q ss_pred -cc--ceeeecCCCCceeEE-EeeC-CCEEEEEcCCCcEEEEEccCCceeeeeccCC-----CcceEEEEEeCCC-CeEE
Q 028802 71 -DC--SDRFVGLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHS-----EYPIESLALSHDR-KFLG 139 (203)
Q Consensus 71 -~~--~~~~~~~~~~~v~~~-~~~~-~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~-----~~~i~~~~~~~~~-~~l~ 139 (203)
.. ...+.. |...+.++ |+|+ +.++++++.++.|++||+++++.+..+..+. ...|.+++|+|++ .+|+
T Consensus 153 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 153 YTPLTPGQSMS-SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCCBCCCCSCC-SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred ccccccccccC-CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 11 122356 78889999 9998 7899999999999999999999888887762 3379999999997 6889
Q ss_pred EEeCCC---cEEEEeCCCc
Q 028802 140 SISHDS---MLKLWDLDDI 155 (203)
Q Consensus 140 ~~~~d~---~i~iwd~~~~ 155 (203)
+++.|+ .|++||+++.
T Consensus 232 ~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECCSSSCCCCEEETTST
T ss_pred EEECCCCCceEEEEeCCCC
Confidence 999998 9999999886
No 93
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=163.44 Aligned_cols=153 Identities=16% Similarity=0.220 Sum_probs=127.4
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCe-EEEeecCCcc----cEEEEE----EeeCCCEEEEecCCCeEEEEEcCCcccc
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSEFSEE----ELTSVV----LMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~----~i~~l~----~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 72 (203)
+|+|++++|++++.|+.|++||+.++. .+..+..+.. .+.+++ |+|++.+|++++.++.|++||+... ..
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~ 202 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM-AL 202 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT-EE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC-ce
Confidence 689999999999999999999999875 5666655443 788888 6789999999999999999999753 33
Q ss_pred ceeeecCCCCceeEE-Eee---CCCEEEEEcCCCcEEEEEccCCceeeeec-----cCCCcceEEEEEeCCCC-eEEEEe
Q 028802 73 SDRFVGLSPNSVDAL-LKL---DEDRVITGSENGLISLVGILPNRIIQPIA-----EHSEYPIESLALSHDRK-FLGSIS 142 (203)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~---~~~~l~~~~~dg~v~v~d~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~-~l~~~~ 142 (203)
..... +...+.++ |+| ++.++++++.+|.|++||+++++.+..+. .|.. .|++++|+|+++ +|++++
T Consensus 203 -~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 203 -RWETN-IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS-TVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp -EEEEE-CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS-CEEEEEEETTEEEEEEEEE
T ss_pred -eeecC-CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC-CEEEEEECCCCCcEEEEEe
Confidence 33455 78899999 999 99999999999999999998876555444 7754 899999999998 899999
Q ss_pred CCCcEEEEeCCCcccC
Q 028802 143 HDSMLKLWDLDDILKG 158 (203)
Q Consensus 143 ~d~~i~iwd~~~~~~~ 158 (203)
.|+.|++||+++....
T Consensus 280 ~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 280 GAGGLHLWKYEYPIQR 295 (357)
T ss_dssp TTSEEEEEEEECCSCC
T ss_pred CCCcEEEeecCCCccc
Confidence 9999999999876543
No 94
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-24 Score=168.62 Aligned_cols=154 Identities=10% Similarity=0.189 Sum_probs=132.5
Q ss_pred ccccCCEEEEEcCCCeEEEEEcCCCeEEEeecC--CcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee-cC
Q 028802 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF--SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-GL 79 (203)
Q Consensus 3 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~ 79 (203)
++|++++|++++.|+.|++||+.+++.+..+.. |...|.+++|+|++.+|++++.|+.|++||++. +..+..+. .
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~- 255 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFG- 255 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCT-
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecC-
Confidence 557899999999999999999999999888887 789999999999999999999999999999985 56666664 5
Q ss_pred CCCceeEE-Eee----CCCEEEEEcCCCcEEEEEccCCceeeeeccCC-------------------------CcceEEE
Q 028802 80 SPNSVDAL-LKL----DEDRVITGSENGLISLVGILPNRIIQPIAEHS-------------------------EYPIESL 129 (203)
Q Consensus 80 ~~~~v~~~-~~~----~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~-------------------------~~~i~~~ 129 (203)
+...+.++ ++| ++.+|++++.||.|++||+++++++..+..|. ...|.++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 67788888 654 67799999999999999999998877776441 2258889
Q ss_pred EEeCCCCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 130 ALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 130 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
+|+ ++++|++++.|+.|++||+.++....
T Consensus 336 ~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 336 SVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 999 77899999999999999999887553
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.3e-24 Score=176.24 Aligned_cols=154 Identities=17% Similarity=0.236 Sum_probs=135.2
Q ss_pred Cccccc--CCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcCCcc-ccc
Q 028802 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCS 73 (203)
Q Consensus 1 l~~sp~--~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~-~~~ 73 (203)
|+|+|+ +++|++|+.||.|++||+.++. .+..+..|...|.+++|+|+ +..+++++.||.|++||+.... ...
T Consensus 59 l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 59 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp EEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred EEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 468887 9999999999999999999886 67778889999999999999 9999999999999999997542 234
Q ss_pred eeeecCCCCceeEE-Eee-------------CCCEEEEEcCCCcEEEEEccCC----ceeeeeccCCCcceEEEEEeCC-
Q 028802 74 DRFVGLSPNSVDAL-LKL-------------DEDRVITGSENGLISLVGILPN----RIIQPIAEHSEYPIESLALSHD- 134 (203)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~-------------~~~~l~~~~~dg~v~v~d~~~~----~~~~~~~~~~~~~i~~~~~~~~- 134 (203)
..+.. |...+.++ |+| ++.++++++.||.|++||++++ .....+.+|.. .|.+++|+|+
T Consensus 139 ~~~~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~-~V~~l~~sp~~ 216 (753)
T 3jro_A 139 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 216 (753)
T ss_dssp EEEEC-CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred eEeec-CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC-cEEEEEeccCC
Confidence 45667 88999999 998 5899999999999999999876 45567778855 8999999999
Q ss_pred --CCeEEEEeCCCcEEEEeCCCcc
Q 028802 135 --RKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 135 --~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
+.+|++++.||.|++||++++.
T Consensus 217 ~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 217 LLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp SSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCCCEEEEEecCCEEEEecCCCCC
Confidence 8999999999999999998863
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.1e-24 Score=165.07 Aligned_cols=151 Identities=17% Similarity=0.258 Sum_probs=137.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++ .+++++.++.|++|++.++..+..+..|...|.+++|+|++.+|++++.++.|++||+.. ...+..+.. |
T Consensus 212 ~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~-~ 288 (425)
T 1r5m_A 212 VEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN-GNSQNCFYG-H 288 (425)
T ss_dssp CEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS-BSCSEEECC-C
T ss_pred EEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CccceEecC-C
Confidence 4577764 588888999999999999888888889999999999999999999999999999999975 567777888 8
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
...+.++ |+|++ ++++++.++.|++||+.+++.+..+..|.. .|.+++|+|++++|++++.|+.|++||+.+..
T Consensus 289 ~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 289 SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV-PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC-CEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc-cEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 8999999 99999 999999999999999999999999988855 89999999999999999999999999998765
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=9.6e-24 Score=170.40 Aligned_cols=157 Identities=15% Similarity=0.196 Sum_probs=130.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC----eEEEeecCCccc-EEEEEEee--CCCEEEEecCCCeEEEEEcCCc----
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN----TVQTRSEFSEEE-LTSVVLMK--NGRKVVCGSQSGTVLLYSWGYF---- 69 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~~~~~~-i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~~---- 69 (203)
++|+|++++|++++ ++.|++|++.++ +....+.+|... |.+++|+| ++++|++++.|+.|++||+...
T Consensus 24 ~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 102 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN 102 (615)
T ss_dssp CEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT
T ss_pred EEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc
Confidence 58999999999998 789999999988 888899999999 99999999 9999999999999999999521
Q ss_pred ---cccceeeec-------------------------------------------CCCCceeEE-EeeCCC-EEEEEcCC
Q 028802 70 ---KDCSDRFVG-------------------------------------------LSPNSVDAL-LKLDED-RVITGSEN 101 (203)
Q Consensus 70 ---~~~~~~~~~-------------------------------------------~~~~~v~~~-~~~~~~-~l~~~~~d 101 (203)
......+.. .|...+.++ |+|++. .+++++.+
T Consensus 103 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 182 (615)
T 1pgu_A 103 SVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 182 (615)
T ss_dssp EEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETT
T ss_pred cccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCC
Confidence 122333332 033445555 666665 67888889
Q ss_pred CcEEEEEccCCceeeeeccCCCc---ceEEEEEeCC-CCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 102 GLISLVGILPNRIIQPIAEHSEY---PIESLALSHD-RKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 102 g~v~v~d~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
+.|++||+.+++.+..+..| .. .|.+++|+|+ +++|++++.|+.|++||+.++....
T Consensus 183 ~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp TEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred CcEEEEeCCCcceeeeeccc-CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 99999999999999999888 44 6999999999 9999999999999999998876543
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-24 Score=178.41 Aligned_cols=154 Identities=16% Similarity=0.164 Sum_probs=134.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcC--CCeEEEeecCCcccEEEEEEeeC--CCEEEEecCCCeEEEEEcCCcc-cccee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~-~~~~~ 75 (203)
++|+|++++|++|+.||.|++|++. ++..+..+.+|..+|.+++|+|+ +++|++++.||.|++||+.... .....
T Consensus 15 l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~ 94 (753)
T 3jro_A 15 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 94 (753)
T ss_dssp ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccc
Confidence 5799999999999999999999998 45677888999999999999988 9999999999999999997532 15566
Q ss_pred eecCCCCceeEE-EeeC--CCEEEEEcCCCcEEEEEccCCc--eeeeeccCCCcceEEEEEeC-------------CCCe
Q 028802 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLALSH-------------DRKF 137 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~dg~v~v~d~~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~ 137 (203)
+.. |...|.++ |+|+ +..+++++.||.|++||++++. ....+..|.. .|.+++|+| ++.+
T Consensus 95 ~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~-~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 95 HAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS-CEEEEEECCCC---------CGGGCC
T ss_pred ccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC-ceEEEEecCcccccccccccCCCCCE
Confidence 777 89999999 9999 9999999999999999998763 3345566744 899999999 5899
Q ss_pred EEEEeCCCcEEEEeCCCcc
Q 028802 138 LGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~ 156 (203)
|++++.||.|++||+++..
T Consensus 173 l~sgs~dg~I~iwd~~~~~ 191 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSDA 191 (753)
T ss_dssp EEEEETTSCEEEEEEETTT
T ss_pred EEEEECCCeEEEEeccCCc
Confidence 9999999999999998763
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.8e-24 Score=166.01 Aligned_cols=149 Identities=10% Similarity=0.142 Sum_probs=130.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEE----eecCCcccEEEEEEeeC---CCEEEEecCCCeEEEEEcCCccccc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT----RSEFSEEELTSVVLMKN---GRKVVCGSQSGTVLLYSWGYFKDCS 73 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~----~~~~~~~~i~~l~~~~~---~~~l~~~~~d~~i~v~d~~~~~~~~ 73 (203)
|+|+|++++|++++.++.|++|++.++.... .+.+|...|.+++|+|+ +.+|++++.|+.|++||+.. +..+
T Consensus 155 ~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~ 233 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIV 233 (450)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCE
T ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-Ccee
Confidence 4799999999999999999999998775443 66788999999999999 99999999999999999975 3455
Q ss_pred ee-eecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccC------------------------CCcceE
Q 028802 74 DR-FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------------------SEYPIE 127 (203)
Q Consensus 74 ~~-~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~------------------------~~~~i~ 127 (203)
.. +.+ |...+.++ |+ ++.+|++++.|+.|++||+.+++++..+..+ ....|.
T Consensus 234 ~~~~~~-h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 234 DKWLFG-HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp EEECCC-CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eeeecC-CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 54 557 88999999 99 9999999999999999999999888777532 123689
Q ss_pred EEEEeCCCCeEEEEe-CCCcEEEEeC
Q 028802 128 SLALSHDRKFLGSIS-HDSMLKLWDL 152 (203)
Q Consensus 128 ~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (203)
+++|+|++++|++++ .++.|++|++
T Consensus 312 ~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 312 KIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999999998 8999999999
No 100
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=1.5e-23 Score=159.90 Aligned_cols=152 Identities=13% Similarity=0.105 Sum_probs=123.9
Q ss_pred cccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCC-------------------------------
Q 028802 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG------------------------------- 49 (203)
Q Consensus 2 ~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~------------------------------- 49 (203)
++.++++.+ ++++.|++|++||+.+++.+..+. +...|.+++|+++.
T Consensus 65 ~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 65 RMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp EECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred EEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 456667766 566778899999999998888776 45678888877642
Q ss_pred ----CEEEE--ecCCCeEEEEEcCCcc--------------c-cceeeecCCCCceeEE-EeeCCCEEEEEcCCCc-EEE
Q 028802 50 ----RKVVC--GSQSGTVLLYSWGYFK--------------D-CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGL-ISL 106 (203)
Q Consensus 50 ----~~l~~--~~~d~~i~v~d~~~~~--------------~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~-v~v 106 (203)
.++++ ++.+|.|++||+.... . .+..+.+ |...|.++ |+|++.+|++++.|+. |++
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred EEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 23343 5678899999987432 0 1667888 99999999 9999999999999998 999
Q ss_pred EEccCCceeeeec-c-CCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 107 VGILPNRIIQPIA-E-HSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 107 ~d~~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
||+++++++..+. + |.. .|.+++|+|++++|++++.|+.|++||++...
T Consensus 223 wd~~~~~~~~~~~~g~h~~-~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDRA-DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EETTTCCEEEEEECTTCCS-CEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EECCCCcEEEEEEcCCCCC-cEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999999998 4 644 89999999999999999999999999997653
No 101
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=3.4e-24 Score=164.74 Aligned_cols=155 Identities=13% Similarity=0.155 Sum_probs=131.5
Q ss_pred Cccccc----C---CEEEEEcCCCeEEEEEcCCCeE-----EEeecCC-----cccEEEEEEe----eCCCE-EEEecCC
Q 028802 1 MTFAAD----A---MKLLGTSGDGTLSVCNLRKNTV-----QTRSEFS-----EEELTSVVLM----KNGRK-VVCGSQS 58 (203)
Q Consensus 1 l~~sp~----~---~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~-----~~~i~~l~~~----~~~~~-l~~~~~d 58 (203)
|+|+|+ + ++|++++.|+.|++|++.++.. ...+..| ...|.+++|+ |++.+ |++++.+
T Consensus 68 ~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d 147 (397)
T 1sq9_A 68 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK 147 (397)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT
T ss_pred EEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC
Confidence 468888 9 9999999999999999988765 7788888 5899999999 99999 9999999
Q ss_pred CeEEEEEcCCc-----cccce-----ee-------ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeecc
Q 028802 59 GTVLLYSWGYF-----KDCSD-----RF-------VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE 120 (203)
Q Consensus 59 ~~i~v~d~~~~-----~~~~~-----~~-------~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~ 120 (203)
+.|++||+... ...+. .+ .. +...+.++ |+|++ ++++++.++.|++||+++++.+..+..
T Consensus 148 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT-PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS-SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEeCCccccccccceeeccCcceeeeeeccccC-CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEec
Confidence 99999999750 23333 44 34 67889999 99999 999999999999999999999988887
Q ss_pred ---C---CCcceEEEEEeCCCCeEEEEeCC---CcEEEEeCCCcccC
Q 028802 121 ---H---SEYPIESLALSHDRKFLGSISHD---SMLKLWDLDDILKG 158 (203)
Q Consensus 121 ---~---~~~~i~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~ 158 (203)
| .. .|.+++|+|++++|++++.| +.|++||++++...
T Consensus 226 ~~~h~~~~~-~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 226 QHSMINNSN-SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp CC---CCCC-CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred cccccccCC-ccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 6 55 89999999999999999999 99999999877543
No 102
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.92 E-value=2e-23 Score=157.13 Aligned_cols=156 Identities=19% Similarity=0.231 Sum_probs=137.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
++|+|++++|++++.|+.|++|+............+...+..+.+++++.+|++++.|+.+++||+.........+.. |
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~-~ 170 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES-H 170 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSS-C
T ss_pred EEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecc-c
Confidence 479999999999999999999999998888888888888999999999999999999999999998754444445566 7
Q ss_pred CCceeEE-EeeC--CCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 81 PNSVDAL-LKLD--EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 81 ~~~v~~~-~~~~--~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
...+..+ |+++ ..++++++.|+.|++||+++++.+..+.+|.. +|.+++|+|++++|++++.|+.|++||+++..+
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCCCeEEEEEeccCce
Confidence 8888888 7654 46788999999999999999999999999965 899999999999999999999999999998765
Q ss_pred C
Q 028802 158 G 158 (203)
Q Consensus 158 ~ 158 (203)
.
T Consensus 250 ~ 250 (340)
T 4aow_A 250 L 250 (340)
T ss_dssp E
T ss_pred e
Confidence 4
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=6e-24 Score=171.59 Aligned_cols=145 Identities=19% Similarity=0.250 Sum_probs=128.3
Q ss_pred CCEEEEEcC-CCeEEEEEcCCCeEE-EeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCce
Q 028802 7 AMKLLGTSG-DGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (203)
Q Consensus 7 ~~~l~~~~~-d~~i~v~d~~~~~~~-~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 84 (203)
+++|++++. ++.|++|++.++... ..+..|...|.+++|+|++++|++++.|+.|++||+.. +..+..+...|...+
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v 534 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKI 534 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCSSCE
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC-CcceeEeecCCCCce
Confidence 778888988 999999999987665 67778999999999999999999999999999999975 455555543377889
Q ss_pred eEE-Eee----------CCCEEEEEcCCCcEEEEEccCC-ceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeC
Q 028802 85 DAL-LKL----------DEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (203)
Q Consensus 85 ~~~-~~~----------~~~~l~~~~~dg~v~v~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (203)
.++ |+| ++.+|++++.||.|++|++.++ +.+..+.+|.. .|.+++|+|+++ |++++.|+.|++|++
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~-~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD-GVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT-CEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred eEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc-ceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 999 999 9999999999999999999987 78888999955 899999999999 999999999999998
Q ss_pred CC
Q 028802 153 DD 154 (203)
Q Consensus 153 ~~ 154 (203)
.+
T Consensus 613 ~~ 614 (615)
T 1pgu_A 613 VL 614 (615)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 104
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=3.7e-24 Score=162.41 Aligned_cols=151 Identities=15% Similarity=0.152 Sum_probs=126.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEE--eeCCCEEEEecCCCeEEEEEcCCccccce----
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVL--MKNGRKVVCGSQSGTVLLYSWGYFKDCSD---- 74 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~--~~~~~~l~~~~~d~~i~v~d~~~~~~~~~---- 74 (203)
|+|+|++++|++++.|+.|++||+.+++.+. +..|...|.+++| +|++.+|++++.|+.|++||+... ..+.
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~ 169 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS-NPMMVLQL 169 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS-SCSEEEEC
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC-cEEEEEec
Confidence 4799999999999999999999999988765 5568899999999 889999999999999999998642 1111
Q ss_pred --------------------------------------------------------------------------------
Q 028802 75 -------------------------------------------------------------------------------- 74 (203)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (203)
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 170 PERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp SSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred CCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence
Q ss_pred ------eeecCCCC------------ceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCC
Q 028802 75 ------RFVGLSPN------------SVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR 135 (203)
Q Consensus 75 ------~~~~~~~~------------~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 135 (203)
.+.. |.. .+.++ |+|++++|++++.||.|++||+.+++++..+..|.. +|.+++|+|++
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g 327 (368)
T 3mmy_A 250 PAKDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ-PISACCFNHNG 327 (368)
T ss_dssp HHHHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS-CEEEEEECTTS
T ss_pred ccccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC-CceEEEECCCC
Confidence 1111 222 58888 999999999999999999999999999999998855 89999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCc
Q 028802 136 KFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 136 ~~l~~~~~d~~i~iwd~~~~ 155 (203)
++|++++.|+..+.|++-..
T Consensus 328 ~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 328 NIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp SCEEEEECCCSTTCGGGCCT
T ss_pred CeEEEEecccccccccccCC
Confidence 99999999887666665443
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.92 E-value=5.8e-23 Score=153.23 Aligned_cols=152 Identities=17% Similarity=0.248 Sum_probs=129.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeec--CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
|+||+++ +|++| .|++|+|||+.+++++..+. .|...|.+++|+|++++|++|+.|+.|++|++.+ ++.+..+.+
T Consensus 31 l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~-~~~~~~~~~ 107 (318)
T 4ggc_A 31 VDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-QKRLRNMTS 107 (318)
T ss_dssp EEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEEC
T ss_pred EEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC-ceeEEEecC
Confidence 4799876 67766 48999999999998877664 6777899999999999999999999999999975 577778888
Q ss_pred CCCCceeEEEeeCCCEEEEEcCCCcEEEEEccCC-ceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
|...+.++ ++++..+++++.++.+++|+.... ..+..+.+|.. .+..+.+++++++|++++.|+.|++||++++..
T Consensus 108 -h~~~~~~~-~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 108 -HSARVGSL-SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp -CSSCEEEE-EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred -ccceEEEe-ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC-ceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 87776654 667789999999999999998765 45567778855 899999999999999999999999999988754
Q ss_pred C
Q 028802 158 G 158 (203)
Q Consensus 158 ~ 158 (203)
.
T Consensus 185 ~ 185 (318)
T 4ggc_A 185 G 185 (318)
T ss_dssp B
T ss_pred c
Confidence 3
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=1.3e-23 Score=161.55 Aligned_cols=152 Identities=16% Similarity=0.241 Sum_probs=129.0
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCeEEEee-------------cCCcccEEEEEEee-CCCEEEEecCCCeEEEEE
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRS-------------EFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYS 65 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~-------------~~~~~~i~~l~~~~-~~~~l~~~~~d~~i~v~d 65 (203)
|+|+| ++++|++|+.||.|++|++.++.....+ .+|...|.+++|+| ++.+|++++.++.|++||
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 128 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWD 128 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEee
Confidence 57999 9999999999999999999876443332 25889999999999 778999999999999999
Q ss_pred cCCccccceeeecCCCCceeEE-Eee---CCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCe-EEE
Q 028802 66 WGYFKDCSDRFVGLSPNSVDAL-LKL---DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF-LGS 140 (203)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~v~~~-~~~---~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~ 140 (203)
+.. +.....+. +...+.++ ++| ++.++++++.++.|++||+++++.+..+..|.. .|.+++|+|++.+ |++
T Consensus 129 ~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ll~~ 204 (408)
T 4a11_B 129 TNT-LQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-EILAVSWSPRYDYILAT 204 (408)
T ss_dssp TTT-TEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS-CEEEEEECSSCTTEEEE
T ss_pred CCC-Cccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-cEEEEEECCCCCcEEEE
Confidence 975 45555554 56677777 766 556999999999999999999999999988855 8999999999985 889
Q ss_pred EeCCCcEEEEeCCCcc
Q 028802 141 ISHDSMLKLWDLDDIL 156 (203)
Q Consensus 141 ~~~d~~i~iwd~~~~~ 156 (203)
++.|+.|++||+++..
T Consensus 205 ~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 205 ASADSRVKLWDVRRAS 220 (408)
T ss_dssp EETTSCEEEEETTCSS
T ss_pred EcCCCcEEEEECCCCC
Confidence 9999999999998764
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=6.9e-24 Score=163.77 Aligned_cols=154 Identities=9% Similarity=0.038 Sum_probs=120.4
Q ss_pred ccccCCEEEEEcCCCeEEEEEcCCCeEE-----EeecCCcccEEEEEEee--------CCCEEEEecCCCeEEEEEcCCc
Q 028802 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQ-----TRSEFSEEELTSVVLMK--------NGRKVVCGSQSGTVLLYSWGYF 69 (203)
Q Consensus 3 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~-----~~~~~~~~~i~~l~~~~--------~~~~l~~~~~d~~i~v~d~~~~ 69 (203)
+++++++|++++.|++|++||+.++... ..+.+|...|.+++|+| ++++|++++.|++|++||+...
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 4567788999999999999999887543 34678999999999998 7899999999999999999753
Q ss_pred cccceeeecCCCCceeEE-EeeCCC-EEEEEcCCCcEEEEEccCCceeeee-------------------------ccCC
Q 028802 70 KDCSDRFVGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPNRIIQPI-------------------------AEHS 122 (203)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~dg~v~v~d~~~~~~~~~~-------------------------~~~~ 122 (203)
..+..+.. |...+.++ |+|++. +|++++.|+.|++||+++++..... .+|.
T Consensus 177 -~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 177 -GPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp -EEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred -ceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 45555666 88899999 999874 7999999999999999876543222 2332
Q ss_pred CcceEEEEEe-CCCCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 123 EYPIESLALS-HDRKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 123 ~~~i~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
. .+.++.|+ |+++.|++++.|+.+++||+.+.....
T Consensus 255 ~-~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 255 S-SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp S-SCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred c-cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc
Confidence 3 67888887 799999999999999999998776543
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=5.5e-23 Score=161.36 Aligned_cols=151 Identities=13% Similarity=0.081 Sum_probs=133.6
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 81 (203)
++++++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+ +..+..+.. |.
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~-h~ 352 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN-GELMYTLQG-HT 352 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECC-CS
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CcEEEEEeC-CC
Confidence 3577899999999999999999999999999999999999999999999999999999999999975 577888888 99
Q ss_pred CceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
..+.++ ++ +.++++++.||.|++||+.++........ ...+..++|+|++++|++++ |+.|++||+.++....
T Consensus 353 ~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 353 ALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHH--TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp SCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEC--TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecC--CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 999988 65 68999999999999999998876655543 22677889999999999998 8999999999887553
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=1.8e-23 Score=157.58 Aligned_cols=147 Identities=18% Similarity=0.171 Sum_probs=125.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe---EEEeecCCcccEEEEEEeeCCC-EEEEecCCCeEEEEEc-CCcccccee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---VQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSW-GYFKDCSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~-~~~~~~~~~ 75 (203)
++|+|++++|++++.|+.|++|++.++. ....+..|...|.+++|+|+++ +|++++.++.|++||+ ... .. ..
T Consensus 17 ~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~-~~ 94 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-SF-QA 94 (342)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-SE-EE
T ss_pred EEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-ce-Ee
Confidence 5799999999999999999999998765 3445557889999999999999 9999999999999999 643 22 22
Q ss_pred eec-CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccC---------CceeeeeccCCCcceEEEEEeCCCCeEEEEeCC
Q 028802 76 FVG-LSPNSVDAL-LKLDEDRVITGSENGLISLVGILP---------NRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (203)
Q Consensus 76 ~~~-~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 144 (203)
+.. .|...+.++ |+| +.++++++.|+.|++||+++ ++++..+. +.. .|.+++|+|++ +++++.+
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN-KIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC-CEEEEEECSSE--EEEEEST
T ss_pred ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC-ceEEEEecCCc--EEEEeCC
Confidence 221 056789999 999 99999999999999999988 77777676 534 89999999987 8999999
Q ss_pred CcEEEEeCCC
Q 028802 145 SMLKLWDLDD 154 (203)
Q Consensus 145 ~~i~iwd~~~ 154 (203)
+.|++||+++
T Consensus 170 ~~i~i~d~~~ 179 (342)
T 1yfq_A 170 SQVQWFRLPL 179 (342)
T ss_dssp TEEEEEESSC
T ss_pred CeEEEEECCc
Confidence 9999999987
No 110
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.2e-22 Score=151.11 Aligned_cols=149 Identities=17% Similarity=0.200 Sum_probs=130.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcc--ccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~ 78 (203)
|+| |++++|++++.||.|++|++.++.....+..|...|.+++|+|++.+|++++.++.+++|++.... ..+..+..
T Consensus 24 ~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 24 VVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp EEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC
T ss_pred EEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh
Confidence 467 899999999999999999999998888888999999999999999999999999999999986432 44666777
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeC-CCCeEEEEeCCCcEEEEeCCCcc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
|...+.++ | ++.++++++.++.|++|| .+..+..+..|.. .+.++.|.| ++.+|++++.|+.|++||.....
T Consensus 103 -~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 176 (313)
T 3odt_A 103 -HQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA-SVWDAKVVSFSENKFLTASADKTIKLWQNDKVI 176 (313)
T ss_dssp -CSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS-CEEEEEEEETTTTEEEEEETTSCEEEEETTEEE
T ss_pred -cccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC-ceeEEEEccCCCCEEEEEECCCCEEEEecCceE
Confidence 88999988 6 678999999999999999 6777888888855 899999988 89999999999999999955443
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=1.7e-23 Score=157.79 Aligned_cols=153 Identities=18% Similarity=0.237 Sum_probs=128.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCC---------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCC-cc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRK---------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY-FK 70 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~-~~ 70 (203)
|+|+| +++|++++.|+.|++||+.+ ++++..+. |...|.+++|+|++ +++++.++.|++||+.. ..
T Consensus 107 l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~ 182 (342)
T 1yfq_A 107 ICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED 182 (342)
T ss_dssp EEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTT
T ss_pred EEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCcccc
Confidence 46889 99999999999999999987 66666665 78899999999887 89999999999999975 33
Q ss_pred ccce-eeecCCCCceeEE-Eee-CCCEEEEEcCCCcEEEEEccCC------ceeeeeccCCC--------cceEEEEEeC
Q 028802 71 DCSD-RFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPN------RIIQPIAEHSE--------YPIESLALSH 133 (203)
Q Consensus 71 ~~~~-~~~~~~~~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~------~~~~~~~~~~~--------~~i~~~~~~~ 133 (203)
.... .... +...+.++ |+| ++.++++++.+|.|++|++... +.+..+..|.. ..|.+++|+|
T Consensus 183 ~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 261 (342)
T 1yfq_A 183 DNGTIEESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261 (342)
T ss_dssp CCCEEEECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT
T ss_pred ccceeeecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC
Confidence 3222 3344 67789999 999 9999999999999999999876 67777777632 2799999999
Q ss_pred CCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 134 DRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 134 ~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
++++|++++.||.|++||+.++...
T Consensus 262 ~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 262 RHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEecCCceEEEEcCccHhHh
Confidence 9999999999999999999887654
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=8.1e-23 Score=177.15 Aligned_cols=154 Identities=18% Similarity=0.275 Sum_probs=136.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEee--CCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++.++++++.|+.|++||+.. +.....+.+
T Consensus 663 ~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~~~~~~~~~ 741 (1249)
T 3sfz_A 663 CAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-KECRNTMFG 741 (1249)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-SSEEEEECC
T ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-cchhheecC
Confidence 47999999999999999999999999999999999999999999999 556899999999999999975 567778888
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeec--------------------------------------
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA-------------------------------------- 119 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~-------------------------------------- 119 (203)
|...+.++ |+|++.++++++.||.|++||+.++.....+.
T Consensus 742 -h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 742 -HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp -CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred -CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCc
Confidence 99999999 99999999999999999999998765443321
Q ss_pred -----------------cCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 120 -----------------EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 120 -----------------~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+|. ..|.+++|+|+++++++++.++.|++|++.++..
T Consensus 821 v~~~d~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 821 VLLFDIHTSGLLAEIHTGHH-STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK 874 (1249)
T ss_dssp EEEEETTTCCEEEEEECSSS-SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE
T ss_pred EEEEEecCCCceeEEcCCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 342 3788999999999999999999999999987654
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=1.5e-22 Score=157.35 Aligned_cols=154 Identities=13% Similarity=0.201 Sum_probs=133.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+|+|+|++|++|+.|++|++||+.+++.+..+.+|...+.++.+ ++..|++++.++.+++||.......+..+.+ |
T Consensus 153 v~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~-h 229 (420)
T 4gga_A 153 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSG-H 229 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-C
T ss_pred EEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecc-c
Confidence 579999999999999999999999999999999999999988876 5689999999999999999876667778888 9
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc----eeeeeccCCCcceEEEEEeCCCC-eEEEE--eCCCcEEEEeC
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLALSHDRK-FLGSI--SHDSMLKLWDL 152 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~----~~~~~~~~~~~~i~~~~~~~~~~-~l~~~--~~d~~i~iwd~ 152 (203)
...+..+ ++|++.++++++.|+.|++|+..+++ .+.....|.. .|.+++|+|.+. .++++ +.|++|++||+
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~-~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG-AVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS-CEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC-ceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 9999999 89999999999999999999998764 3445566644 899999999765 44543 47999999999
Q ss_pred CCcccC
Q 028802 153 DDILKG 158 (203)
Q Consensus 153 ~~~~~~ 158 (203)
.++...
T Consensus 309 ~t~~~~ 314 (420)
T 4gga_A 309 CSGACL 314 (420)
T ss_dssp TTTEEE
T ss_pred Cccccc
Confidence 987644
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.90 E-value=2.6e-22 Score=156.97 Aligned_cols=148 Identities=18% Similarity=0.258 Sum_probs=129.0
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 81 (203)
++++++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +.+|++++.|+.|++||+.+ +..+..+.+ |.
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~-h~ 199 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET-GECIHTLYG-HT 199 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-TEEEEEECC-CS
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc-CcEEEEECC-CC
Confidence 366789999999999999999999999999999999999999997 67999999999999999975 567777888 88
Q ss_pred CceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
..+.++ + ++..+++++.||.|++||+.+++.+..+..|.. .|.++.| ++.+|++++.|+.|++||++++...
T Consensus 200 ~~v~~~~~--~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 200 STVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-AVRCVQY--DGRRVVSGAYDFMVKVWDPETETCL 272 (445)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS-CEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred CcEEEEEe--cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc-cEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEe
Confidence 889888 6 467899999999999999999998888888855 7888888 7788999999999999998876543
No 115
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=3.3e-22 Score=156.04 Aligned_cols=148 Identities=16% Similarity=0.227 Sum_probs=130.3
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 81 (203)
++++++++|++|+.||.|++||+.+++....+.+|...|.+++| ++.+|++|+.||.|++||+.+ +..+..+.. |.
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~-h~ 213 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT-GEMLNTLIH-HC 213 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS-CCEEEEECC-CC
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC-CcEEEEEcC-CC
Confidence 45678999999999999999999999999999999999999998 788999999999999999975 577788888 99
Q ss_pred CceeEE-EeeCCCEEEEEcCCCcEEEEEccCCcee---eeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRII---QPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
..+.++ |+ +..+++++.||.|++||+.++... ..+.+|.. .|.+++| ++++|++++.|+.|++||++++..
T Consensus 214 ~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 214 EAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp SCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS-CEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC-cEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 999999 65 569999999999999999887655 56677754 8999988 788999999999999999988754
Q ss_pred C
Q 028802 158 G 158 (203)
Q Consensus 158 ~ 158 (203)
.
T Consensus 289 ~ 289 (435)
T 1p22_A 289 V 289 (435)
T ss_dssp E
T ss_pred E
Confidence 3
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=9.7e-23 Score=161.28 Aligned_cols=145 Identities=16% Similarity=0.187 Sum_probs=120.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe-------EEEee----cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-------VQTRS----EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~-------~~~~~----~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~ 69 (203)
++|||+|++||+|+.||+|++|++.++. .+.++ .+|...|.+++|+|+| +++++.|+.+++|++...
T Consensus 135 vafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 135 FEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp EEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCC
Confidence 5899999999999999999999999874 35665 6677899999999999 788888999999999753
Q ss_pred cc--cceeee-cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEE--eCCCCeEEEEeC
Q 028802 70 KD--CSDRFV-GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLAL--SHDRKFLGSISH 143 (203)
Q Consensus 70 ~~--~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~ 143 (203)
.. ....+. . |...|.++ |+ +..+++++ ++.|++||+..++......+|.. .|..++| +|++..|++++.
T Consensus 213 ~~~~~~~tL~~~-h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~-~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 213 SHQPVSRMIQNA-SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLE-NFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp SSCCCEEEEECC-CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCS-CCCEEEETTCSSCEEEEECSS
T ss_pred ccccceeeeccc-ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCc-eEEEEEeeeCCCCCEEEEEcC
Confidence 31 223453 6 77889999 88 68888887 69999999998777443437754 8999999 999999999999
Q ss_pred CCcEEEEeCC
Q 028802 144 DSMLKLWDLD 153 (203)
Q Consensus 144 d~~i~iwd~~ 153 (203)
+|+ ++|...
T Consensus 288 dG~-klw~~d 296 (588)
T 2j04_A 288 TSY-KVLLED 296 (588)
T ss_dssp CEE-EEEESS
T ss_pred CCC-EEEeec
Confidence 999 999986
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.90 E-value=4e-23 Score=159.53 Aligned_cols=151 Identities=12% Similarity=0.156 Sum_probs=106.0
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCC-CEEEEecCCCeEEEEEcCCccccce----------
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSD---------- 74 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~---------- 74 (203)
++++||+|+.|++|+|||+.++..+..+..|..++.+++|+|++ .+|++++.|+.|++||+........
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 88999999999999999999888877888889999999999987 5799999999999999975321111
Q ss_pred --------------eeecCCCCceeEE-E-eeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEE----------
Q 028802 75 --------------RFVGLSPNSVDAL-L-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIES---------- 128 (203)
Q Consensus 75 --------------~~~~~~~~~v~~~-~-~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~---------- 128 (203)
...+ +...+.++ | .|++..|++++.|+.+++||+..++....+..+.. .+..
T Consensus 235 ~~~s~~~~~~~~~~~~~~-~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~ 312 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSG-IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTM-KLGPKNLLPNVQGI 312 (393)
T ss_dssp CSEEEESGGGC------C-CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEE
T ss_pred eEEecccccceeeeeccc-ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecC-ccccEEEccccccc
Confidence 0123 55667788 6 48999999999999999999987766555544422 2222
Q ss_pred --------EEEeC--CCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 129 --------LALSH--DRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 129 --------~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
..|+| ++.++++++.|+.|++||+.++.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 313 SLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp CSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred cccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 23333 3345677889999999999877543
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=2.4e-22 Score=153.17 Aligned_cols=149 Identities=13% Similarity=0.108 Sum_probs=118.7
Q ss_pred CEEEE--EcCCCeEEEEEcCCCe----------------EEEeecCCcccEEEEEEeeCCCEEEEecCCCe-EEEEEcCC
Q 028802 8 MKLLG--TSGDGTLSVCNLRKNT----------------VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT-VLLYSWGY 68 (203)
Q Consensus 8 ~~l~~--~~~d~~i~v~d~~~~~----------------~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~-i~v~d~~~ 68 (203)
.++++ |+.+|.|++||+.++. .+..+.+|...|.+++|+|++.+|++++.|++ |++||+.+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 45555 5889999999998764 16778899999999999999999999999998 99999985
Q ss_pred ccccceeee-cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCcee--eee--------------------ccCCCc
Q 028802 69 FKDCSDRFV-GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRII--QPI--------------------AEHSEY 124 (203)
Q Consensus 69 ~~~~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~--~~~--------------------~~~~~~ 124 (203)
+..+..+. +.|...|.++ |+|++++|++++.|+.|++||+..+... ..+ ......
T Consensus 228 -~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
T 3vu4_A 228 -GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV 306 (355)
T ss_dssp -CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTC
T ss_pred -CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCC
Confidence 56677776 2267889999 9999999999999999999999754311 111 111011
Q ss_pred ceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 125 PIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 125 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
....++|++++++|++++.||.+++|++.....
T Consensus 307 ~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 307 RGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp CCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred CceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 246789999999999999999999999876543
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=1.9e-22 Score=157.40 Aligned_cols=145 Identities=23% Similarity=0.356 Sum_probs=125.0
Q ss_pred ccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCce
Q 028802 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (203)
Q Consensus 5 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v 84 (203)
.++++|++|+.|+.|++||+.+++.+..+..|...|.++.| ++.+|++++.|+.|++||+.+ +..+..+.+ |...+
T Consensus 264 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~-h~~~v 339 (435)
T 1p22_A 264 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-GACLRVLEG-HEELV 339 (435)
T ss_dssp EETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTT-CCEEEEECC-CSSCE
T ss_pred eCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCC-CCEEEEEeC-CcCcE
Confidence 47889999999999999999999999999999999999988 478999999999999999985 577888888 99999
Q ss_pred eEE-EeeCCCEEEEEcCCCcEEEEEccCCc---------eeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 85 DAL-LKLDEDRVITGSENGLISLVGILPNR---------IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 85 ~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
.++ + ++.++++|+.||.|++||+.++. ++..+..|.. .|.+++| ++.+|++++.||.|++||+.+
T Consensus 340 ~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 340 RCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS-CCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred EEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC-CeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 998 6 78999999999999999998765 7788888855 8999999 788999999999999999987
Q ss_pred cccC
Q 028802 155 ILKG 158 (203)
Q Consensus 155 ~~~~ 158 (203)
....
T Consensus 415 ~~~~ 418 (435)
T 1p22_A 415 DPAA 418 (435)
T ss_dssp ----
T ss_pred CCCc
Confidence 6544
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=3e-21 Score=150.97 Aligned_cols=144 Identities=19% Similarity=0.270 Sum_probs=128.9
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCcee
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVD 85 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 85 (203)
++++|++|+.||+|++||+.+++.+..+.+|...|.++.|+ +..+++++.|+.|++||+.. +..+..+.. |...+.
T Consensus 168 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~-~~~~v~ 243 (445)
T 2ovr_B 168 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET-GQCLHVLMG-HVAAVR 243 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS-CCEEEEEEC-CSSCEE
T ss_pred cCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC-CcEEEEEcC-CcccEE
Confidence 36789999999999999999999999999999999999985 67899999999999999975 567778888 899999
Q ss_pred EE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 86 AL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 86 ~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
++ + ++.++++++.+|.|++||+++++++..+..|.. .|.++.| ++.++++++.|+.|++||++++...
T Consensus 244 ~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 244 CVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp EEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS-CEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCC-ceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 88 6 788999999999999999999999999988855 8999988 8889999999999999999887643
No 121
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=8e-22 Score=154.13 Aligned_cols=153 Identities=9% Similarity=-0.012 Sum_probs=122.3
Q ss_pred CcccccCCEEE----EEcCCCeEEEEEcCCC--------e---EEEeecCCcccEEEEEEeeC-CCEEEEecCCCeEEEE
Q 028802 1 MTFAADAMKLL----GTSGDGTLSVCNLRKN--------T---VQTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLY 64 (203)
Q Consensus 1 l~~sp~~~~l~----~~~~d~~i~v~d~~~~--------~---~~~~~~~~~~~i~~l~~~~~-~~~l~~~~~d~~i~v~ 64 (203)
|+|+|+|++|+ +++.|+.|+|||+.++ + ....+.+|...|.+++|+|+ +.+|++++.||.|++|
T Consensus 98 l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 98 LALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 57999999999 7888999999998654 1 24556678999999999997 7899999999999999
Q ss_pred EcCCccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCC------cceEEEEEeCCCCe
Q 028802 65 SWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE------YPIESLALSHDRKF 137 (203)
Q Consensus 65 d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~ 137 (203)
|++.. ........ |...+.++ |+|+|++|++|+.||.|++||++ ++....+..+.. ..|.+++|++++.+
T Consensus 178 D~~~~-~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 178 QVTET-VKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EESSS-EEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EcCCC-cceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99854 44444556 78889999 99999999999999999999998 555555543321 26899999999887
Q ss_pred EEEEe-CCC------cEEEEeCCCcc
Q 028802 138 LGSIS-HDS------MLKLWDLDDIL 156 (203)
Q Consensus 138 l~~~~-~d~------~i~iwd~~~~~ 156 (203)
+++.+ .+| .+++|++++..
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEccCCCccCCCCceEEEEeccCC
Confidence 75443 443 38999998653
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.88 E-value=3.3e-21 Score=144.17 Aligned_cols=141 Identities=8% Similarity=-0.016 Sum_probs=107.6
Q ss_pred CCCeEEEEEcC-CCeEEEeecCCcccEEEEEEee---CCCEEEEecCCCeEEEEEcCCccccceeeecCCCC---ceeEE
Q 028802 15 GDGTLSVCNLR-KNTVQTRSEFSEEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPN---SVDAL 87 (203)
Q Consensus 15 ~d~~i~v~d~~-~~~~~~~~~~~~~~i~~l~~~~---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~---~v~~~ 87 (203)
.|+.|++|++. +++.+..+..|...+..++|+| ++..|++++.|++|++||+.+ ++.+.++.+ +.. .+.++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T-Gk~l~tL~g-~~~~v~~v~~v 232 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT-GQLLKKMHI-DDSYQASVCHK 232 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT-CCEEEEEEC-CC---CCCEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC-CcEEEEEcC-CCcceeeeEEE
Confidence 38888888884 4777777778888888888888 678999999999999999985 577788875 433 45566
Q ss_pred -EeeCCCEE------------EEEcCCCcEEEEEccCCceeeee-----ccCCCcceEEEEEeCCCCeEEEEeCCCcEEE
Q 028802 88 -LKLDEDRV------------ITGSENGLISLVGILPNRIIQPI-----AEHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 88 -~~~~~~~l------------~~~~~dg~v~v~d~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
|+|+|.++ ++|+.|++|++||..+++.+..+ .+|.. .+.+..+ ++.++++++.|++|+|
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~-~~lsg~~--sg~~lASgS~DgTIkI 309 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG-RFLEGDV--KDHCAAAILTSGTIAI 309 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC-CEEEEEE--ETTEEEEEETTSCEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc-eeEcccc--CCCEEEEEcCCCcEEE
Confidence 89999887 45778899999999999887655 24533 3443333 4889999999999999
Q ss_pred EeCCCcccCCC
Q 028802 150 WDLDDILKGSG 160 (203)
Q Consensus 150 wd~~~~~~~~~ 160 (203)
||+.+++..+.
T Consensus 310 WDl~tGk~l~t 320 (356)
T 2w18_A 310 WDLLLGQCTAL 320 (356)
T ss_dssp EETTTCSEEEE
T ss_pred EECCCCcEEEE
Confidence 99999875543
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.8e-22 Score=156.74 Aligned_cols=150 Identities=8% Similarity=0.073 Sum_probs=120.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCC-----------eEEEe----ecCCcccEEEEEEeeCCCEEE----EecCCCeE
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKN-----------TVQTR----SEFSEEELTSVVLMKNGRKVV----CGSQSGTV 61 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~-----------~~~~~----~~~~~~~i~~l~~~~~~~~l~----~~~~d~~i 61 (203)
|++++++.++++++.++ +++|+...- ..... ...+...|.+++|+|++++|+ +++.|+.|
T Consensus 42 lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 42 LAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSII 120 (434)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEE
T ss_pred EEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceE
Confidence 47889999999998887 888875311 11100 012456799999999999999 78889999
Q ss_pred EEEEcCCc-----c--c---cceeeecCCCCceeEE-EeeC-CCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEE
Q 028802 62 LLYSWGYF-----K--D---CSDRFVGLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESL 129 (203)
Q Consensus 62 ~v~d~~~~-----~--~---~~~~~~~~~~~~v~~~-~~~~-~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~ 129 (203)
++||+... . . .+..+.+ |...|.++ |+|+ +.+|++++.||.|++||++++..+.....|.. .|.++
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~-~v~~v 198 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKD-AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV-AVTSV 198 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCS-GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG-CEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCC-CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC-ceeEE
Confidence 99998642 1 1 1345566 78899999 9998 88999999999999999998876666666644 89999
Q ss_pred EEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 130 ALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 130 ~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
+|+|+|++|++++.|+.|++||++
T Consensus 199 ~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 199 CWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EECTTSSCEEEEETTSCEEEECTT
T ss_pred EEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999999999999999999998
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=4.7e-21 Score=148.98 Aligned_cols=153 Identities=13% Similarity=0.046 Sum_probs=130.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEE-----eecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccccee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT-----RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~-----~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 75 (203)
++|+|++.++++++.++.|++||+.+++... .+..|...|.+++|+|++.++++++.++.|++||+.. +..+..
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~-~~~~~~ 206 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT-LAYKAT 206 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT-CCEEEE
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC-ceEEEE
Confidence 5789977788888889999999999988776 3457788999999999999999999999999999974 466677
Q ss_pred eecCCCCceeEE-EeeCCCEEEEE-cCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe--------CCC
Q 028802 76 FVGLSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS--------HDS 145 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~-~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~d~ 145 (203)
+.. +...+.++ |+|+++.++++ ..++.|++||+++++.+..+..+ . .+.+++|+|++++|++++ .|+
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 207 VDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-G-LPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-S-EEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-C-CceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 777 88889999 99999988654 47999999999999888888765 3 689999999999998888 488
Q ss_pred cEEEEeCCCccc
Q 028802 146 MLKLWDLDDILK 157 (203)
Q Consensus 146 ~i~iwd~~~~~~ 157 (203)
.|++||+.++..
T Consensus 284 ~i~~~d~~~~~~ 295 (433)
T 3bws_A 284 RLGIYSMDKEKL 295 (433)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEECCCCcE
Confidence 999999987653
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.88 E-value=1.1e-20 Score=145.06 Aligned_cols=152 Identities=13% Similarity=0.152 Sum_probs=125.6
Q ss_pred CcccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEE-ecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|++++| ++++.++.|++||+.+++.+..+..+. .+.+++|+|++++|++ ++.++.|++||+.. +..+..+..
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~-~~~~~~~~~ 114 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS-NTVAGTVKT 114 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCC-CeEEEEEeC
Confidence 4799999977 677789999999999999888887655 8999999999998754 55679999999975 455555554
Q ss_pred CCCCceeEE-EeeCCCEE-EEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeE-EEEeCCCcEEEEeCCCc
Q 028802 79 LSPNSVDAL-LKLDEDRV-ITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL-GSISHDSMLKLWDLDDI 155 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l-~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~ 155 (203)
...+.++ |+|+++.+ ++++.++.|++||+.+++.+..+..+ . .+.+++|+|++++| ++++.++.|++||++++
T Consensus 115 --~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 115 --GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-R-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp --SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred --CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-C-CcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 4466778 99999987 67778999999999999988888776 3 57999999999988 56678899999999887
Q ss_pred ccC
Q 028802 156 LKG 158 (203)
Q Consensus 156 ~~~ 158 (203)
...
T Consensus 191 ~~~ 193 (391)
T 1l0q_A 191 SVI 193 (391)
T ss_dssp EEE
T ss_pred eEE
Confidence 543
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.87 E-value=2.8e-20 Score=142.75 Aligned_cols=151 Identities=17% Similarity=0.191 Sum_probs=126.0
Q ss_pred CcccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEE-EEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|+++.| ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.| ++++.++.|++||+.. +.....+.
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~- 197 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK- 197 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-
Confidence 4799999977 67888999999999999888887765 456899999999887 5677889999999975 34555554
Q ss_pred CCCCceeEE-EeeCCCEEEEEc---CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeE-EEEeCCCcEEEEeCC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS---ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL-GSISHDSMLKLWDLD 153 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~---~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~ 153 (203)
+...+.++ |+|+++++++++ .++.|++||+.+++.+..+..+ . .+.+++|+|++++| ++++.|+.|++||+.
T Consensus 198 -~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 198 -VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-P-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp -CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-S-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred -cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-C-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 45567778 999999999888 6899999999999988888776 3 58899999999987 566789999999998
Q ss_pred Cccc
Q 028802 154 DILK 157 (203)
Q Consensus 154 ~~~~ 157 (203)
++..
T Consensus 275 ~~~~ 278 (391)
T 1l0q_A 275 TNTI 278 (391)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=1.3e-19 Score=140.81 Aligned_cols=151 Identities=15% Similarity=0.122 Sum_probs=119.6
Q ss_pred CcccccCCEEEEEcCCC---eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEE-EecCCC--eEEEEEcCCccccce
Q 028802 1 MTFAADAMKLLGTSGDG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSG--TVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~d~--~i~v~d~~~~~~~~~ 74 (203)
++|||+|++|++++.++ .|++||+.+++.. .+..+...+.+++|+|+|++|+ +++.++ .|++||+.. +. ..
T Consensus 184 ~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-~~-~~ 260 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-GQ-IR 260 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CC-EE
T ss_pred eEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC-CC-EE
Confidence 47999999999998875 9999999988765 4566778899999999999887 555554 499999874 33 35
Q ss_pred eeecCCCCceeEE-EeeCCCEEEEEcC-CC--cEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC---CcE
Q 028802 75 RFVGLSPNSVDAL-LKLDEDRVITGSE-NG--LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD---SML 147 (203)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~-dg--~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~~i 147 (203)
.+.. +...+.++ |+|+|+.|++++. ++ .|++||+.+++.. .+..+.. .+.+++|+|+|++|++++.+ ..|
T Consensus 261 ~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~-~~~~~~~spdG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 261 QVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp ECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSS-EEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred eCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCCC-cccCeEECCCCCEEEEEECcCCceEE
Confidence 6666 77788888 9999999998876 44 6788898877643 3444533 68899999999999988754 589
Q ss_pred EEEeCCCccc
Q 028802 148 KLWDLDDILK 157 (203)
Q Consensus 148 ~iwd~~~~~~ 157 (203)
++||+.++..
T Consensus 338 ~~~d~~~~~~ 347 (415)
T 2hqs_A 338 AKQDLATGGV 347 (415)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCCE
Confidence 9999988754
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.84 E-value=1.6e-19 Score=140.38 Aligned_cols=153 Identities=10% Similarity=0.054 Sum_probs=126.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEE-EecCCCeEEEEEcCCccccceeeecC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
++|+|+++++++++.|+.|++||+.+++.+..+..|...+.+++|+|++..++ +++.++.|++||+.. +..+..+..
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~- 252 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT-KLEIRKTDK- 252 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT-TEEEEECCC-
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC-CcEEEEecC-
Confidence 46889999999999999999999999988888888888999999999999885 455799999999974 455555554
Q ss_pred CCCceeEE-EeeCCCEEEEEc--------CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeE-EEEeCCCcEEE
Q 028802 80 SPNSVDAL-LKLDEDRVITGS--------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL-GSISHDSMLKL 149 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~--------~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~i 149 (203)
...+.++ |+|+++.+++++ .++.|++||+.+++.+..+... . .+.+++|+|+++++ ++++.++.|++
T Consensus 253 -~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 253 -IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-G-NKRHIVSGNTENKIYVSDMCCSKIEV 329 (433)
T ss_dssp -CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-E-CEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred -CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-C-CcceEEECCCCCEEEEEecCCCEEEE
Confidence 4457777 899999999888 4889999999988877666332 3 68899999999865 56678999999
Q ss_pred EeCCCcccC
Q 028802 150 WDLDDILKG 158 (203)
Q Consensus 150 wd~~~~~~~ 158 (203)
||+.++...
T Consensus 330 ~d~~~~~~~ 338 (433)
T 3bws_A 330 YDLKEKKVQ 338 (433)
T ss_dssp EETTTTEEE
T ss_pred EECCCCcEE
Confidence 999876543
No 129
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.83 E-value=3.6e-20 Score=141.69 Aligned_cols=110 Identities=16% Similarity=0.162 Sum_probs=95.5
Q ss_pred CcccccCCEEEEEcCCC----eEEEEEcCCCeE----EEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc
Q 028802 1 MTFAADAMKLLGTSGDG----TLSVCNLRKNTV----QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~----~i~v~d~~~~~~----~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 72 (203)
++|+|+++++++++.++ .+++|++..... ...+..|...|++++|+|+|++|++|+.|+.|+|||+.+ +++
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-~~~ 303 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-LSM 303 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC-CcE
Confidence 47999999999998876 688999876543 345678889999999999999999999999999999985 456
Q ss_pred cee-eecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC
Q 028802 73 SDR-FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN 112 (203)
Q Consensus 73 ~~~-~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~ 112 (203)
+.. +.+ |...|+++ |+|+|++|++++.|++|+||++...
T Consensus 304 ~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 304 SKIFKQA-HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEETTS-SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEecCc-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 655 467 99999999 9999999999999999999998643
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.82 E-value=1.2e-18 Score=135.49 Aligned_cols=149 Identities=16% Similarity=0.137 Sum_probs=117.0
Q ss_pred CcccccCCEEE-EEcCCC--eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC-CC--eEEEEEcCCccccce
Q 028802 1 MTFAADAMKLL-GTSGDG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SG--TVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~~~l~-~~~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~ 74 (203)
++|+|+|++|+ +++.++ .|++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|++||+... ...
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~--~~~ 304 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG--APQ 304 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS--CCE
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC--CEE
Confidence 47999999887 565555 499999988766 567777888999999999999888775 44 6777787642 234
Q ss_pred eeecCCCCceeEE-EeeCCCEEEEEcCC---CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCC---cE
Q 028802 75 RFVGLSPNSVDAL-LKLDEDRVITGSEN---GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDS---ML 147 (203)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d---g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i 147 (203)
.+.. +...+..+ |+|+|++|++++.+ ..|++||+.+++.. .+..+ . .+.+++|+|+|++|++++.++ .|
T Consensus 305 ~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l 380 (415)
T 2hqs_A 305 RITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVL 380 (415)
T ss_dssp ECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEE
T ss_pred EEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEE
Confidence 4555 66677778 99999999988764 57999999988764 45555 3 689999999999999888776 79
Q ss_pred EEEeCCCcc
Q 028802 148 KLWDLDDIL 156 (203)
Q Consensus 148 ~iwd~~~~~ 156 (203)
++||+.+..
T Consensus 381 ~~~d~~g~~ 389 (415)
T 2hqs_A 381 NLVSTDGRF 389 (415)
T ss_dssp EEEETTSCC
T ss_pred EEEECCCCc
Confidence 999987554
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.81 E-value=8.8e-19 Score=144.84 Aligned_cols=141 Identities=11% Similarity=0.077 Sum_probs=111.1
Q ss_pred CcccccCCEEEEEcC-CC-----eEEEEEcCCCeEEEeecCCc------------------------ccEEEEEEeeCCC
Q 028802 1 MTFAADAMKLLGTSG-DG-----TLSVCNLRKNTVQTRSEFSE------------------------EELTSVVLMKNGR 50 (203)
Q Consensus 1 l~~sp~~~~l~~~~~-d~-----~i~v~d~~~~~~~~~~~~~~------------------------~~i~~l~~~~~~~ 50 (203)
++|||||++|++++. ++ .|++||+.+++....+..+. ..+.+++|+|||+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 479999999999988 88 89999999987766555432 2378899999999
Q ss_pred EEEEecCCCeEEEEEcCCccc--cceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCc---
Q 028802 51 KVVCGSQSGTVLLYSWGYFKD--CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEY--- 124 (203)
Q Consensus 51 ~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~--- 124 (203)
+|++++. +.|++||+.. +. ....+.. +...+..+ |+|+|++|++++. +.|++||+.+++.......+...
T Consensus 122 ~l~~~~~-~~i~~~d~~~-~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQ-EGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EEEEEET-TEEEEEESSS-CSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EEEEEeC-CcEEEEECCC-CCcceEEEccc-CCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceec
Confidence 9998886 9999999974 31 4455666 77778888 9999999998874 58999999988776554443220
Q ss_pred ------------ceEEEEEeCCCCeEEEEeCCC
Q 028802 125 ------------PIESLALSHDRKFLGSISHDS 145 (203)
Q Consensus 125 ------------~i~~~~~~~~~~~l~~~~~d~ 145 (203)
.+.+++|+|||++|++++.|+
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 147799999999999887665
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=7.4e-19 Score=144.88 Aligned_cols=140 Identities=14% Similarity=0.033 Sum_probs=107.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcc---cEEEEEEeeCCCEEEEecCC---------CeEEEEEcCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE---ELTSVVLMKNGRKVVCGSQS---------GTVLLYSWGY 68 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~i~~l~~~~~~~~l~~~~~d---------~~i~v~d~~~ 68 (203)
++|+|||+++++ +.||+|++||+.+++....+..+.. .|.+++|+|||++|++++.+ +.+++||+..
T Consensus 22 ~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred cEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 579999997766 7889999999999887777766654 48999999999999998764 7889999975
Q ss_pred ccccceeeec--CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCc-----------------ceEE
Q 028802 69 FKDCSDRFVG--LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEY-----------------PIES 128 (203)
Q Consensus 69 ~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~-----------------~i~~ 128 (203)
. .. ..+.. .+...+..+ |+|+|+.|++++. +.|++|++.+++.......+... .+.+
T Consensus 101 ~-~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 101 G-DP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp C-CC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred C-ce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 3 33 33332 033347777 9999999999886 78999999988776655443221 1278
Q ss_pred EEEeCCCCeEEEEeCC
Q 028802 129 LALSHDRKFLGSISHD 144 (203)
Q Consensus 129 ~~~~~~~~~l~~~~~d 144 (203)
++|+|||++|++++.+
T Consensus 178 ~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAIN 193 (723)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred EEECCCCCEEEEEEEC
Confidence 9999999999988754
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=9.1e-18 Score=123.33 Aligned_cols=153 Identities=13% Similarity=0.056 Sum_probs=114.6
Q ss_pred CcccccCCEEEEEcC--C--CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEE-EecCCCeEEEEEcCCcccccee
Q 028802 1 MTFAADAMKLLGTSG--D--GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 1 l~~sp~~~~l~~~~~--d--~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~ 75 (203)
++|+|++++|++++. + ..|.+|++.++.. ..+..+ ..+..++|+|+++.|+ ++..++.+.+|++.........
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 579999999999883 3 4455555555543 344433 3488999999999887 6778899999997543444455
Q ss_pred eecCCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEcc-CCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC--------
Q 028802 76 FVGLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGIL-PNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD-------- 144 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------- 144 (203)
+.. +...+.++ |+|+++.|++++ .++.+.+|++. .+..+..+..+. ..+.+++|+|++++|++++.+
T Consensus 168 ~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 168 LTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA-YGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS-EEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred ccc-CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC-cccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 666 67788888 999999888766 48889999886 455666676664 378899999999999888765
Q ss_pred ---CcEEEEeCCCccc
Q 028802 145 ---SMLKLWDLDDILK 157 (203)
Q Consensus 145 ---~~i~iwd~~~~~~ 157 (203)
+.|++||+.++..
T Consensus 246 ~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNV 261 (297)
T ss_dssp SEEEEEEEEETTSCSC
T ss_pred cCceEEEEEecCCCCc
Confidence 5699999987643
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.78 E-value=3.1e-17 Score=131.57 Aligned_cols=151 Identities=8% Similarity=0.053 Sum_probs=124.5
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEc--CCccccceeeecC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSW--GYFKDCSDRFVGL 79 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~--~~~~~~~~~~~~~ 79 (203)
+|+|++.++++++.+++|.+||..+++++..+..+.. +..++|+|++++|++++.++.|.+||+ .+ ...+..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-~~~~~~i~~- 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKE-PTKVAEIKI- 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSS-CEEEEEEEC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCC-CcEEEEEec-
Confidence 4788998999999999999999999999888874333 889999999999999999999999999 54 455666664
Q ss_pred CCCceeEE-Eee----CCCEEEEEcC-CCcEEEEEccCCceeeeeccC----------CCcceEEEEEeCCCCeE-EEEe
Q 028802 80 SPNSVDAL-LKL----DEDRVITGSE-NGLISLVGILPNRIIQPIAEH----------SEYPIESLALSHDRKFL-GSIS 142 (203)
Q Consensus 80 ~~~~v~~~-~~~----~~~~l~~~~~-dg~v~v~d~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l-~~~~ 142 (203)
...+..+ |+| +|+++++++. ++.|.+||..+++++..+..+ ....+.++.++|++..+ ++..
T Consensus 221 -g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 -GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred -CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 4456777 999 9999999885 899999999999988877642 23368899999987654 5666
Q ss_pred CCCcEEEEeCCCcc
Q 028802 143 HDSMLKLWDLDDIL 156 (203)
Q Consensus 143 ~d~~i~iwd~~~~~ 156 (203)
.++.|.+||+.+..
T Consensus 300 ~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 300 ETGKVLLVNYKDID 313 (543)
T ss_dssp TTTEEEEEECTTSS
T ss_pred CCCeEEEEEecCCC
Confidence 88999999997643
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=8.9e-17 Score=121.37 Aligned_cols=156 Identities=12% Similarity=0.114 Sum_probs=121.3
Q ss_pred CcccccCCEEE-EEcCCCeEEEEEcCCCeEEEeecCCcc---------cEEEEEEeeCCCEEEEec--CCCeEEEEEcCC
Q 028802 1 MTFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEFSEE---------ELTSVVLMKNGRKVVCGS--QSGTVLLYSWGY 68 (203)
Q Consensus 1 l~~sp~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~---------~i~~l~~~~~~~~l~~~~--~d~~i~v~d~~~ 68 (203)
++|+|+|++++ +...++.|.+||..+++.+..+..+.. .+.+++|+|+++++++++ .++.|.+||..+
T Consensus 94 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 94 ATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred EEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 46899999665 455679999999999988777765432 278899999999887766 478899999974
Q ss_pred ccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCC---CcceEEEEEeCCCCeEEEEe-C
Q 028802 69 FKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS---EYPIESLALSHDRKFLGSIS-H 143 (203)
Q Consensus 69 ~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~-~ 143 (203)
+.....+.. +...+..+ |+|+++++++++.++.|.+||+.+++.+..+.... ...+..++|+|++++|++++ .
T Consensus 174 -~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 174 -IKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp -TEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred -CceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence 455555653 34446667 89999999999999999999999998887765411 22577899999999877666 4
Q ss_pred CCcEEEEeCCCcccC
Q 028802 144 DSMLKLWDLDDILKG 158 (203)
Q Consensus 144 d~~i~iwd~~~~~~~ 158 (203)
++.|.+||+.++...
T Consensus 252 ~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 252 AAEVLVVDTRNGNIL 266 (353)
T ss_dssp SSEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCcEE
Confidence 599999999877543
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.77 E-value=3e-17 Score=123.04 Aligned_cols=150 Identities=10% Similarity=0.002 Sum_probs=116.0
Q ss_pred CcccccCCEEEEEc------------CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCC
Q 028802 1 MTFAADAMKLLGTS------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY 68 (203)
Q Consensus 1 l~~sp~~~~l~~~~------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~ 68 (203)
++|+|+|++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|.+||+..
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTT
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCC
Confidence 47899999998885 579999999999888777764 3457789999999988887 58899999864
Q ss_pred ccccceeeecC-----------------------------------------------------------------CCCc
Q 028802 69 FKDCSDRFVGL-----------------------------------------------------------------SPNS 83 (203)
Q Consensus 69 ~~~~~~~~~~~-----------------------------------------------------------------~~~~ 83 (203)
. .....+... +...
T Consensus 164 ~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 242 (337)
T 1pby_B 164 G-TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242 (337)
T ss_dssp T-EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred C-cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCc
Confidence 2 222111100 1112
Q ss_pred eeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 84 VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 84 v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
+..+ |+|++++++++ ++.|++||+.+++.+..+..+ . .+.+++|+|+|++|++++.++.|.+||+.++...
T Consensus 243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-H-SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-S-CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-C-ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 3346 89999999888 689999999999888777655 3 5789999999999998889999999999887644
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=2.3e-17 Score=121.16 Aligned_cols=149 Identities=11% Similarity=0.071 Sum_probs=111.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCC-CeEEEeecCC-cccEEEEEEeeCCCEEEEec--CCCeEEEEEcCCccccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRK-NTVQTRSEFS-EEELTSVVLMKNGRKVVCGS--QSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~ 76 (203)
++|+|+|++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|++++|++++ .++...+|.+.........+
T Consensus 47 ~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 47 PNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC
T ss_pred eEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe
Confidence 47999999999986 68999999998 7776666555 36788999999999999988 33455666554323334445
Q ss_pred ecCCCCceeEE-EeeCCCEEE-EEcCCCcEEEEEccC-CceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeC
Q 028802 77 VGLSPNSVDAL-LKLDEDRVI-TGSENGLISLVGILP-NRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~-~~~~dg~v~v~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (203)
.. + ..+..+ |+|+++.|+ ++..++.+.+|++.. +.....+..+.. .+.+++|+|++++|++++ .++.+.+|++
T Consensus 126 ~~-~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 126 TK-N-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG-RNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp CS-S-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS-CEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ec-C-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC-ccccceECCCCCEEEEEecCCCCccEEEE
Confidence 44 3 347777 999999887 677889889988642 233344555534 799999999999888766 5889999987
Q ss_pred C
Q 028802 153 D 153 (203)
Q Consensus 153 ~ 153 (203)
.
T Consensus 203 ~ 203 (297)
T 2ojh_A 203 R 203 (297)
T ss_dssp E
T ss_pred C
Confidence 5
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.76 E-value=7.8e-17 Score=121.69 Aligned_cols=154 Identities=9% Similarity=0.042 Sum_probs=121.4
Q ss_pred CcccccCCEEEEEc--CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTS--GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|++++++++. .++.|.+||+.+++.+..+..+...+.+++|+|++++|++++.++.+.+||+.+ +.....+..
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~-~~~~~~~~~ 224 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD-NKILSRKKL 224 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT-TEEEEEEEC
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC-CeEEEEEEc
Confidence 46899999887765 478999999999998888875556688899999999999999999999999975 344444432
Q ss_pred ---CCCCceeEE-EeeCCCEEEEEcC-CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeC
Q 028802 79 ---LSPNSVDAL-LKLDEDRVITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (203)
Q Consensus 79 ---~~~~~v~~~-~~~~~~~l~~~~~-dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (203)
.+...+..+ |+|+++++++++. ++.|.+||+.+++.+..+.... ...++|+|+++++++++ .++.|.+||+
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 023345667 8999998777665 4899999999998887777552 25689999999776655 6899999999
Q ss_pred CCcccC
Q 028802 153 DDILKG 158 (203)
Q Consensus 153 ~~~~~~ 158 (203)
.++...
T Consensus 302 ~~~~~~ 307 (353)
T 3vgz_A 302 KSYKVV 307 (353)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 887644
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.76 E-value=4.3e-17 Score=130.70 Aligned_cols=153 Identities=14% Similarity=0.120 Sum_probs=119.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEc--CCCeEEEeecCCcccEEEEEEee----CCCEEEEecC-CCeEEEEEcCCccccc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNL--RKNTVQTRSEFSEEELTSVVLMK----NGRKVVCGSQ-SGTVLLYSWGYFKDCS 73 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~--~~~~~~~~~~~~~~~i~~l~~~~----~~~~l~~~~~-d~~i~v~d~~~~~~~~ 73 (203)
++|+|+|++|++++.+++|.+||+ .+++.+..+.. ...+..++|+| +|++|++++. +++|.+||..+ .+++
T Consensus 184 v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t-~~~~ 261 (543)
T 1nir_A 184 SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-LEPK 261 (543)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-CCEE
T ss_pred EEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-cccc
Confidence 469999999999999999999999 78888888874 45679999999 9999998885 89999999875 4555
Q ss_pred eeeecCC-----------CCceeEE-EeeCCCEE-EEEcCCCcEEEEEccCCceee--eeccCCCcceEEEEEeCCCCeE
Q 028802 74 DRFVGLS-----------PNSVDAL-LKLDEDRV-ITGSENGLISLVGILPNRIIQ--PIAEHSEYPIESLALSHDRKFL 138 (203)
Q Consensus 74 ~~~~~~~-----------~~~v~~~-~~~~~~~l-~~~~~dg~v~v~d~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l 138 (203)
..+.. + ...+..+ ++|++..+ ++...++.|.+||+.+.+.+. .+. + ...+..+.|+|+|++|
T Consensus 262 ~~i~~-~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~-~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 262 QIVST-RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-A-APFLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEC-CEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-C-CSSCCCEEECTTSCEE
T ss_pred eeecc-cCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-c-CcCccCceECCCCCEE
Confidence 55543 2 1256677 88876654 556678999999998765443 333 2 2257889999999987
Q ss_pred EEEe-CCCcEEEEeCCCcccC
Q 028802 139 GSIS-HDSMLKLWDLDDILKG 158 (203)
Q Consensus 139 ~~~~-~d~~i~iwd~~~~~~~ 158 (203)
++++ .+++|.+||+.++...
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEE
T ss_pred EEEecCCCeEEEEECCCCeEE
Confidence 7655 6899999999987643
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.75 E-value=1e-16 Score=120.38 Aligned_cols=151 Identities=14% Similarity=0.200 Sum_probs=110.9
Q ss_pred CcccccCCEEEEEcCC-CeEEEEEcC--CCe--EEEeecCCcccEEEEEEeeCCCEEEEecC-CCeEEEEEcCC--cccc
Q 028802 1 MTFAADAMKLLGTSGD-GTLSVCNLR--KNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGY--FKDC 72 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d-~~i~v~d~~--~~~--~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-d~~i~v~d~~~--~~~~ 72 (203)
++|+|++++|++++.+ +.|.+|++. ++. .+..+..+. .+..++|+|++++|++++. ++.|.+||+.. ....
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc
Confidence 4799999988888776 999999997 444 334444433 7889999999998876654 88999999941 1223
Q ss_pred ceeeecCCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccC-Cceee----eeccCCCcceEEEEEeCCCCeEEEEe-CC
Q 028802 73 SDRFVGLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILP-NRIIQ----PIAEHSEYPIESLALSHDRKFLGSIS-HD 144 (203)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~-~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~~-~d 144 (203)
...+.. ...+.++ |+|+++++++++ .++.|++|++.+ ++... .+..+....+..++|+|++++|++++ .+
T Consensus 122 ~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 122 VDVVEG--LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp EEEECC--CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred cccccC--CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC
Confidence 333333 3446667 999999888877 789999999987 54432 23333233688899999999876555 78
Q ss_pred CcEEEEeCCC
Q 028802 145 SMLKLWDLDD 154 (203)
Q Consensus 145 ~~i~iwd~~~ 154 (203)
+.|.+|++..
T Consensus 200 ~~i~~~~~~~ 209 (343)
T 1ri6_A 200 SSVDVWELKD 209 (343)
T ss_dssp TEEEEEESSC
T ss_pred CEEEEEEecC
Confidence 9999999954
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.75 E-value=1.1e-16 Score=120.06 Aligned_cols=153 Identities=8% Similarity=0.063 Sum_probs=114.7
Q ss_pred CcccccCCEEEEEcCCC---eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEe-cCCCe-EEEEEcCCccccc--
Q 028802 1 MTFAADAMKLLGTSGDG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGT-VLLYSWGYFKDCS-- 73 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~d~~-i~v~d~~~~~~~~-- 73 (203)
++|+|+|++|+++..++ .|.+||+.+++.+..+..+ ..+.+++|+|++++|+++ ..++. +.+|++...+...
T Consensus 89 ~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 89 VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 47899999999655553 8999999999888777653 446899999999866555 45577 9999987433221
Q ss_pred -eeeecCCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCce---eeeeccCCCcceEEEEEeCCCCeEEEEe-CCCc
Q 028802 74 -DRFVGLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRI---IQPIAEHSEYPIESLALSHDRKFLGSIS-HDSM 146 (203)
Q Consensus 74 -~~~~~~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~ 146 (203)
..... ....+..+ |+|+|+++++++ .++.|++||+.+++. +..+..+ . .+..++|+|+|++|++++ .++.
T Consensus 168 ~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~-~~~~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 168 GQEFIS-GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-N-LPGTIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEC-SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-S-CCCCEEECTTSSEEEEECSSEEE
T ss_pred CCcccc-CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-C-CCceEEECCCCCEEEEEEcCCCE
Confidence 11112 34456777 999999666554 688999999998887 7777655 3 578899999999876655 5788
Q ss_pred EEEEeCCCccc
Q 028802 147 LKLWDLDDILK 157 (203)
Q Consensus 147 i~iwd~~~~~~ 157 (203)
|.+||+.++..
T Consensus 245 i~~~d~~~~~~ 255 (331)
T 3u4y_A 245 VFNFNQLSGTL 255 (331)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCce
Confidence 99999988765
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.74 E-value=3.4e-16 Score=117.39 Aligned_cols=148 Identities=12% Similarity=0.086 Sum_probs=114.0
Q ss_pred cccccCCE-EEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC-CCeEEEEEcCCcccc-ceeeec
Q 028802 2 TFAADAMK-LLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKDC-SDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~-~~~~~~ 78 (203)
.|.+++++ +++.+.++.|.+||+.+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+... .. ...+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE-PPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-SCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-ceeEEeccc
Confidence 36666665 5677788999999999998887777666667 9999999997766665 889999999753 44 556665
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCC---cEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEE-eCCCc-EEEEeC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENG---LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI-SHDSM-LKLWDL 152 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg---~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~-i~iwd~ 152 (203)
+..+..++ |+|++++++++..++ .|.+||+.+++.+..+..+ . ...+++|+|+|++|+++ ..++. |.+|++
T Consensus 82 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 -GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-Y-DAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp -CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-T-TEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred -CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-C-CccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 56666646 999999999655553 8999999999888877665 3 57899999999876655 45578 999998
Q ss_pred CC
Q 028802 153 DD 154 (203)
Q Consensus 153 ~~ 154 (203)
..
T Consensus 159 ~~ 160 (331)
T 3u4y_A 159 DA 160 (331)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=2.2e-17 Score=136.08 Aligned_cols=153 Identities=14% Similarity=0.078 Sum_probs=112.9
Q ss_pred CcccccCCEEEEEcCC---------CeEEEEEcCCCeEEEeec---CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCC
Q 028802 1 MTFAADAMKLLGTSGD---------GTLSVCNLRKNTVQTRSE---FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY 68 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~---~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~ 68 (203)
++|||||++|++++.+ +.|++||+.+++. ..+. .+...+..++|+|||+.|++++. +.|++||+..
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC
Confidence 4699999999998764 7899999998865 3333 34445888999999999998876 7899999874
Q ss_pred ccccceeeecCCCCce------------------eEE-EeeCCCEEEEEcCCC---------------------------
Q 028802 69 FKDCSDRFVGLSPNSV------------------DAL-LKLDEDRVITGSENG--------------------------- 102 (203)
Q Consensus 69 ~~~~~~~~~~~~~~~v------------------~~~-~~~~~~~l~~~~~dg--------------------------- 102 (203)
+........ +...+ ..+ |+|+|+.|++++.++
T Consensus 144 -g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (723)
T 1xfd_A 144 -KQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKA 221 (723)
T ss_dssp -SCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBT
T ss_pred -CceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCC
Confidence 343333332 22222 567 999999999887543
Q ss_pred -------cEEEEEccCCceeeeeccCC-----CcceEEEEEeCCCCeEEEEeC----CCcEEEEeCCCccc
Q 028802 103 -------LISLVGILPNRIIQPIAEHS-----EYPIESLALSHDRKFLGSISH----DSMLKLWDLDDILK 157 (203)
Q Consensus 103 -------~v~v~d~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~ 157 (203)
.|++||+.+++....+..+. ...+..++|+|||++|++... +..|++||+.++..
T Consensus 222 G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 222 GSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp TSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred CCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 79999998887655555431 236889999999998876653 35799999987653
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.73 E-value=5.6e-17 Score=134.10 Aligned_cols=151 Identities=12% Similarity=0.069 Sum_probs=115.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe--EEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|||||++|++++. +.|++||+.++. ....+..+...+..++|+|||++|++++ ++.|++||+.. +........
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~-g~~~~~~~~ 190 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS-GRQMQLTAD 190 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT-TEEEECCCC
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCC-CCEEEeccC
Confidence 479999999999887 999999998872 3345667778899999999999999887 46899999974 333332222
Q ss_pred CCCCc----------------eeEE-EeeCCCEEEEEcCCC---------------------------------cEEEEE
Q 028802 79 LSPNS----------------VDAL-LKLDEDRVITGSENG---------------------------------LISLVG 108 (203)
Q Consensus 79 ~~~~~----------------v~~~-~~~~~~~l~~~~~dg---------------------------------~v~v~d 108 (203)
+... +..+ |+|+|++|++++.++ .|++||
T Consensus 191 -~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 -GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp -CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred -CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 2221 3567 999999999987665 788999
Q ss_pred ccC-Cceeeeecc--CCCcceEEEEEeCCCCeEEEEeC-----CCcEEEEeCCCccc
Q 028802 109 ILP-NRIIQPIAE--HSEYPIESLALSHDRKFLGSISH-----DSMLKLWDLDDILK 157 (203)
Q Consensus 109 ~~~-~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~ 157 (203)
+.+ ++....... + ...+..++| |||++|++++. +..|++||+.++..
T Consensus 270 ~~~~~~~~~~~~~~~~-~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQ-DIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp SSTTCCCEEECCCSCS-SEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CCCCCceEEecCCCCc-ceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 988 776544432 4 337899999 99999987664 56799999988753
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=7e-17 Score=138.34 Aligned_cols=149 Identities=12% Similarity=0.137 Sum_probs=123.6
Q ss_pred Cccc-ccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcc-cEEEEEEeeCCCEEEEecCCCeEE-EEEcCCccccceeee
Q 028802 1 MTFA-ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-ELTSVVLMKNGRKVVCGSQSGTVL-LYSWGYFKDCSDRFV 77 (203)
Q Consensus 1 l~~s-p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~l~~~~~~~~l~~~~~d~~i~-v~d~~~~~~~~~~~~ 77 (203)
++|| |+|++|++++ ++.|++|++.++... .+..+.. .+..++|+ +++.|++++.++.+. +|++.. +. ...+.
T Consensus 301 ~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~-~~-~~~l~ 375 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT-GK-AEKFE 375 (1045)
T ss_dssp EEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT-CC-EEECC
T ss_pred eeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC-CC-ceEec
Confidence 4689 9999998887 689999999887654 3556666 89999999 999999988888888 889864 23 33444
Q ss_pred cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCC----------c
Q 028802 78 GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDS----------M 146 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----------~ 146 (203)
. +...+..+ |+|+|++|++++.++.|++||+.+++....+..|.. .+.+++|+|||++|++++.++ .
T Consensus 376 ~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~-~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 376 E-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA-MITDFTISDNSRFIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp C-CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-CCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred C-CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC-CccceEECCCCCeEEEEecCccccccCCCCCe
Confidence 6 77788888 999999999999999999999999988877767744 789999999999998887644 8
Q ss_pred EEEEeCCCcc
Q 028802 147 LKLWDLDDIL 156 (203)
Q Consensus 147 i~iwd~~~~~ 156 (203)
|++||+.++.
T Consensus 454 i~l~d~~~g~ 463 (1045)
T 1k32_A 454 IHVYDMEGRK 463 (1045)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 9999998765
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.72 E-value=4.2e-17 Score=134.52 Aligned_cols=139 Identities=16% Similarity=0.076 Sum_probs=101.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcc---cEEEEEEeeCCCEEEEecC---------CCeEEEEEcCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE---ELTSVVLMKNGRKVVCGSQ---------SGTVLLYSWGY 68 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~i~~l~~~~~~~~l~~~~~---------d~~i~v~d~~~ 68 (203)
++|+|+|+++++ +.|++|++||+.+++....+..+.. .+.+++|+|||++|++++. ++.|++||+..
T Consensus 21 ~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 21 PNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred cEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 479999965555 4689999999999887766655433 3889999999999998876 68999999974
Q ss_pred ccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcce-----------------EEEE
Q 028802 69 FKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPI-----------------ESLA 130 (203)
Q Consensus 69 ~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i-----------------~~~~ 130 (203)
+..+.... ....+..+ |+|+|+.|+++. ++.|++|++.+++............| .+++
T Consensus 100 -g~~~~~~~--l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 100 -GEFVRGNE--LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp -TEECCSSC--CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred -Ccccccee--cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 33311011 12346667 999999999885 78999999988776543321111112 4799
Q ss_pred EeCCCCeEEEEeCC
Q 028802 131 LSHDRKFLGSISHD 144 (203)
Q Consensus 131 ~~~~~~~l~~~~~d 144 (203)
|+|||++|++++.|
T Consensus 176 wSPDG~~la~~~~d 189 (719)
T 1z68_A 176 WSPNGKFLAYAEFN 189 (719)
T ss_dssp ECTTSSEEEEEEEE
T ss_pred ECCCCCEEEEEEEC
Confidence 99999999988755
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=9.3e-16 Score=115.15 Aligned_cols=151 Identities=8% Similarity=0.118 Sum_probs=106.6
Q ss_pred CcccccCCEEEEEc-CCCeEEEEEcCC-CeEEE----eec-CCcccEEEEEEeeCCCEEEEe-cCCCeEEEEEcCCc-cc
Q 028802 1 MTFAADAMKLLGTS-GDGTLSVCNLRK-NTVQT----RSE-FSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYF-KD 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~-~d~~i~v~d~~~-~~~~~----~~~-~~~~~i~~l~~~~~~~~l~~~-~~d~~i~v~d~~~~-~~ 71 (203)
++|+|++++|++++ .++.|++|++.+ ++... .+. .....+..++|+|++++|+++ ..++.+.+|++... +.
T Consensus 134 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 134 ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN 213 (343)
T ss_dssp CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSC
T ss_pred EEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 57999999888776 789999999987 54432 222 234578899999999977655 47899999999531 11
Q ss_pred c--ceeeecC--C---CCceeEE-EeeCCCEEEEE-cCCCcEEEEEcc--CC--ceeeeeccCCCcceEEEEEeCCCCeE
Q 028802 72 C--SDRFVGL--S---PNSVDAL-LKLDEDRVITG-SENGLISLVGIL--PN--RIIQPIAEHSEYPIESLALSHDRKFL 138 (203)
Q Consensus 72 ~--~~~~~~~--~---~~~v~~~-~~~~~~~l~~~-~~dg~v~v~d~~--~~--~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (203)
. ...+... . ...+..+ |+|++++++++ ..++.|.+|++. ++ +.+..+..+ . .+..++|+|++++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l 291 (343)
T 1ri6_A 214 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-T-QPRGFNVDHSGKYL 291 (343)
T ss_dssp CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-S-SCCCEEECTTSSEE
T ss_pred EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-C-ccceEEECCCCCEE
Confidence 1 1222210 1 1234567 89999888754 478999999998 33 344445444 3 47889999999998
Q ss_pred EEEe-CCCcEEEEeCC
Q 028802 139 GSIS-HDSMLKLWDLD 153 (203)
Q Consensus 139 ~~~~-~d~~i~iwd~~ 153 (203)
++++ .++.|.+|++.
T Consensus 292 ~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 292 IAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEECTTTCEEEEEEEE
T ss_pred EEecCCCCeEEEEEEc
Confidence 8887 68999999553
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.71 E-value=4.9e-16 Score=117.52 Aligned_cols=153 Identities=10% Similarity=0.100 Sum_probs=107.0
Q ss_pred CcccccCCEEEEEcC---CCeEEEEEcCCCe--EEEeecCCcccEEEEEEeeCCCEEEEec-CCCeEEEEEcCCcccc--
Q 028802 1 MTFAADAMKLLGTSG---DGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDC-- 72 (203)
Q Consensus 1 l~~sp~~~~l~~~~~---d~~i~v~d~~~~~--~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~-- 72 (203)
|+|+|+|+ |++++. ++.|++|++.++. .+..+..+...+..++|+|++++|++++ .++.+.+|++...+..
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 57899999 555543 6899999997765 3344444566788999999999888877 6799999999632221
Q ss_pred ceeeecCC--------CCceeEE-EeeCCCEEEEEcCCCcEEEEEcc-CCcee--eeeccCCCcceEEEEEeCCCCeEEE
Q 028802 73 SDRFVGLS--------PNSVDAL-LKLDEDRVITGSENGLISLVGIL-PNRII--QPIAEHSEYPIESLALSHDRKFLGS 140 (203)
Q Consensus 73 ~~~~~~~~--------~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~-~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~ 140 (203)
+..+.... ...+.++ |+|+|+++++...++.|++|++. +++.. ..+..+....+..++|+|+|++|++
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence 22222100 1136667 89999966666678899999998 45433 2222322335788999999997766
Q ss_pred E-eCCCcEEEEeCCC
Q 028802 141 I-SHDSMLKLWDLDD 154 (203)
Q Consensus 141 ~-~~d~~i~iwd~~~ 154 (203)
+ ..++.|.+|++..
T Consensus 204 ~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 204 AGELSSQIASLKYDT 218 (347)
T ss_dssp EETTTTEEEEEEEET
T ss_pred EeCCCCEEEEEEecC
Confidence 5 4688999999874
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.70 E-value=5.3e-16 Score=132.92 Aligned_cols=149 Identities=11% Similarity=0.025 Sum_probs=123.1
Q ss_pred CcccccCCEEEEEcCCCeEE-EEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecC
Q 028802 1 MTFAADAMKLLGTSGDGTLS-VCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~-v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
++|+ +|+.|++++.++.|+ +|++.++.... +..+...+..++|+|+|++|++++.++.|++||+.+ +.....+..
T Consensus 343 ~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~~~~- 418 (1045)
T 1k32_A 343 RGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVIERS- 418 (1045)
T ss_dssp ECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEEC-
T ss_pred eeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-CceEEeccC-
Confidence 3688 999999988888899 99998776543 447778899999999999999999999999999974 455555556
Q ss_pred CCCceeEE-EeeCCCEEEEEcCCC----------cEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEE
Q 028802 80 SPNSVDAL-LKLDEDRVITGSENG----------LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLK 148 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~dg----------~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 148 (203)
+...+..+ |+|+|++|++++.++ .|++||+.+++ +..+..+.. .+..++|+|+|++|++++.++...
T Consensus 419 ~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~-~~~~~~~spdG~~l~~~s~~~~~~ 496 (1045)
T 1k32_A 419 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENS-HDYAPAFDADSKNLYYLSYRSLDP 496 (1045)
T ss_dssp SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSS-BEEEEEECTTSCEEEEEESCCCCC
T ss_pred CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCc-ccCCceEcCCCCEEEEEecccCCc
Confidence 78888888 999999999887654 89999999877 556666644 688899999999999999888888
Q ss_pred EEeCCCc
Q 028802 149 LWDLDDI 155 (203)
Q Consensus 149 iwd~~~~ 155 (203)
+|+....
T Consensus 497 ~~~~~~~ 503 (1045)
T 1k32_A 497 SPDRVVL 503 (1045)
T ss_dssp EECSSSS
T ss_pred Ccchhcc
Confidence 8886543
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=3e-16 Score=118.20 Aligned_cols=148 Identities=8% Similarity=0.010 Sum_probs=109.2
Q ss_pred CcccccCCEEEEEcCC------------CeEEEEEcCCCeE---EEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEE
Q 028802 1 MTFAADAMKLLGTSGD------------GTLSVCNLRKNTV---QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYS 65 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d------------~~i~v~d~~~~~~---~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d 65 (203)
++|+|+|++|++++.+ +.|.+||+.+++. +..+.. ...+.+++|+|+++ +++++. .|.+||
T Consensus 97 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d 172 (349)
T 1jmx_B 97 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DIYKMD 172 (349)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SEEEEC
T ss_pred eEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEccC--cEEEEe
Confidence 4799999999988755 8999999987432 233333 34588899999999 555543 499999
Q ss_pred cCCccccceeeecCCC----------------------------------------------------------------
Q 028802 66 WGYFKDCSDRFVGLSP---------------------------------------------------------------- 81 (203)
Q Consensus 66 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 81 (203)
+.+ +.....+.. ..
T Consensus 173 ~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (349)
T 1jmx_B 173 VKT-GKYTVALPL-RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF 250 (349)
T ss_dssp TTT-CCEEEEECS-TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE
T ss_pred CCC-Cceeccccc-cccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc
Confidence 864 333333321 11
Q ss_pred ----CceeEE-Eee-CCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 82 ----NSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 82 ----~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
..+..+ ++| ++++++++ ++.|.+||+.+++.+..+... . .+.+++|+|++++|++++.++.|.+||+.++
T Consensus 251 ~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 251 ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-H-TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-S-CCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-C-CccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 022334 578 99999888 889999999999888777654 2 4778999999999988888999999999887
Q ss_pred ccC
Q 028802 156 LKG 158 (203)
Q Consensus 156 ~~~ 158 (203)
+..
T Consensus 327 ~~~ 329 (349)
T 1jmx_B 327 EKV 329 (349)
T ss_dssp EEE
T ss_pred cee
Confidence 644
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.70 E-value=1.8e-16 Score=127.92 Aligned_cols=143 Identities=6% Similarity=-0.033 Sum_probs=111.3
Q ss_pred cccccCCE-EEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC----CeEEEEEcCCccccceee
Q 028802 2 TFAADAMK-LLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 2 ~~sp~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~ 76 (203)
+|+|+|+. +++.+.++.+.+||+.+++.......+. .+++|+|||++|++++.+ +.|++||+.. +. ...+
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~-g~-~~~l 190 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS-GG-LRVF 190 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTT-CC-CEEE
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC-CC-ceEe
Confidence 68898863 3333444556699999887655443332 789999999999987776 7899999864 23 4466
Q ss_pred ecCCCCceeEE-EeeCCCEEEEEcCCC--cEEEEEccCCceeeeeccCCCcceEEEE--------EeCCCCeEEEEeCCC
Q 028802 77 VGLSPNSVDAL-LKLDEDRVITGSENG--LISLVGILPNRIIQPIAEHSEYPIESLA--------LSHDRKFLGSISHDS 145 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~dg--~v~v~d~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~~~~~d~ 145 (203)
.. +...+..+ |+|+|+.|+++..++ .|++||+.+++.. .+..+.. .+..++ |+|||..+++++.++
T Consensus 191 ~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 191 DS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK-DFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS-HHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred ec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc-ChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 77 77788888 999999999888888 8999999988877 6666633 555566 999998888899999
Q ss_pred cEEEEeC
Q 028802 146 MLKLWDL 152 (203)
Q Consensus 146 ~i~iwd~ 152 (203)
.+++|++
T Consensus 268 ~~~l~~~ 274 (582)
T 3o4h_A 268 RSAVFID 274 (582)
T ss_dssp EEEEEET
T ss_pred cEEEEEE
Confidence 9999999
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.70 E-value=2.3e-15 Score=114.43 Aligned_cols=150 Identities=10% Similarity=0.167 Sum_probs=104.4
Q ss_pred CcccccCCEEEEEc-CCCeEEEEEcCCCe-------E------EEeecCCcccEEEEEEeeCCCEEEEec-CCCeEEEEE
Q 028802 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNT-------V------QTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYS 65 (203)
Q Consensus 1 l~~sp~~~~l~~~~-~d~~i~v~d~~~~~-------~------~~~~~~~~~~i~~l~~~~~~~~l~~~~-~d~~i~v~d 65 (203)
++|+|+|++|+++. .++.|.+|++.... + ......+...+..++|+|+++++++++ .++.|.+|+
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 47899999775554 58899999887432 1 111223345678999999999887776 589999999
Q ss_pred cCCcccc--ceeeec--CCCCceeEE-EeeCCCEEEEEcCC--CcEEEEEcc--CCc--eeeeeccCCCcceEEEEEeCC
Q 028802 66 WGYFKDC--SDRFVG--LSPNSVDAL-LKLDEDRVITGSEN--GLISLVGIL--PNR--IIQPIAEHSEYPIESLALSHD 134 (203)
Q Consensus 66 ~~~~~~~--~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d--g~v~v~d~~--~~~--~~~~~~~~~~~~i~~~~~~~~ 134 (203)
+.. +.. +..+.. .+......+ |+|+|++|+++... +.|.+|++. +++ .+..+.. ...+.+++|+|+
T Consensus 240 ~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spd 316 (361)
T 3scy_A 240 YAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPN 316 (361)
T ss_dssp EET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTT
T ss_pred ecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCC
Confidence 873 222 222221 022335677 99999998777654 889999985 444 3333433 225788999999
Q ss_pred CCeEEEEe-CCCcEEEEeCC
Q 028802 135 RKFLGSIS-HDSMLKLWDLD 153 (203)
Q Consensus 135 ~~~l~~~~-~d~~i~iwd~~ 153 (203)
|++|++++ .++.|.+|.+.
T Consensus 317 g~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 317 GKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEEE
Confidence 99998887 67899996553
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=3.6e-16 Score=128.67 Aligned_cols=149 Identities=11% Similarity=0.045 Sum_probs=111.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc----cccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF----KDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~----~~~~~~~ 76 (203)
++|||+ +.++++. ++.|++||+.+++.... ..+...+.+++|+|+|++|+++ .++.|++|++... +......
T Consensus 87 ~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 87 TLDAGR-GLVVLFT-QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp EEETTT-TEEEEEE-TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC
T ss_pred EEECCC-CeEEEEE-CCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEec
Confidence 468999 6666554 49999999998876543 3445678889999999999985 6799999999741 3333322
Q ss_pred ecCCCCc--------------eeEE-EeeCCCEEEEEc---------------------------------CCCcEEEEE
Q 028802 77 VGLSPNS--------------VDAL-LKLDEDRVITGS---------------------------------ENGLISLVG 108 (203)
Q Consensus 77 ~~~~~~~--------------v~~~-~~~~~~~l~~~~---------------------------------~dg~v~v~d 108 (203)
.. +... +.++ |+|+|++|++++ .+..|++||
T Consensus 163 ~~-~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 163 ID-GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp SC-CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred cC-CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 22 2222 3667 999999999987 346799999
Q ss_pred ccCCceeeeec--cCCCcceEEEEEeCCCCeEEEEeCCC-----cEEEEeCCCc
Q 028802 109 ILPNRIIQPIA--EHSEYPIESLALSHDRKFLGSISHDS-----MLKLWDLDDI 155 (203)
Q Consensus 109 ~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~ 155 (203)
+.+++...... .+ ...+.+++|+|||++|++++.++ .|++||+.++
T Consensus 242 ~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 242 LATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp TTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred CCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 99887654443 23 23689999999999999888776 8999999887
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.70 E-value=3.1e-15 Score=113.10 Aligned_cols=154 Identities=12% Similarity=0.143 Sum_probs=106.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcC-CCeEE--EeecC-CcccEEEEEEeeCCCEEEE-ecCCCeEEEEEcCCc-ccc--
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLR-KNTVQ--TRSEF-SEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYF-KDC-- 72 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~-~~~~~--~~~~~-~~~~i~~l~~~~~~~~l~~-~~~d~~i~v~d~~~~-~~~-- 72 (203)
++|+|+|+++++...++.|++|++. ++... ..+.. ....+..++|+|+|++|++ ...++.+.+|++... +..
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 4789999966666778999999998 45432 22222 2346788999999996665 556889999998641 221
Q ss_pred ceeeecCCC------CceeEE-EeeCCCEEEE-EcCCCcEEEEEccC-C--ceeeeeccCCCcceEEEEEeCCCCeEEEE
Q 028802 73 SDRFVGLSP------NSVDAL-LKLDEDRVIT-GSENGLISLVGILP-N--RIIQPIAEHSEYPIESLALSHDRKFLGSI 141 (203)
Q Consensus 73 ~~~~~~~~~------~~v~~~-~~~~~~~l~~-~~~dg~v~v~d~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 141 (203)
+..+.. .. ..+..+ |+|+|++|++ ...++.|.+|++.. + ..+..+..+.. .+..++|+|+|++|+++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 226 LGIVKT-IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD-FPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEEES-SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS-CCCEEEECTTSSEEEEE
T ss_pred eeeeee-cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC-CcCeEEECCCCCEEEEE
Confidence 222222 22 346667 9999998855 45588999999863 2 34455555423 57899999999998888
Q ss_pred eC-CCcEEEEeC--CCcc
Q 028802 142 SH-DSMLKLWDL--DDIL 156 (203)
Q Consensus 142 ~~-d~~i~iwd~--~~~~ 156 (203)
+. ++.|.+|++ .++.
T Consensus 304 ~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 304 NQNTDNATLYARDLTSGK 321 (347)
T ss_dssp ETTTTEEEEEEECTTTCC
T ss_pred EcCCCcEEEEEEeCCCCe
Confidence 75 489999944 4443
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=9.6e-16 Score=115.44 Aligned_cols=152 Identities=10% Similarity=0.018 Sum_probs=113.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCc-ccEEEEEEeeCCCEEE-EecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
+++++++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+ +.....+..
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-~~~~~~~~~ 83 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-CKNTFHANL 83 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEES
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-CcEEEEEEc
Confidence 4678889999999999999999999998887776543 2577899999998665 555689999999975 344444442
Q ss_pred CC-----CCceeEE-EeeCCCEEEEEcCC------------CcEEEEEccCCcee---eeeccCCCcceEEEEEeCCCCe
Q 028802 79 LS-----PNSVDAL-LKLDEDRVITGSEN------------GLISLVGILPNRII---QPIAEHSEYPIESLALSHDRKF 137 (203)
Q Consensus 79 ~~-----~~~v~~~-~~~~~~~l~~~~~d------------g~v~v~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~ 137 (203)
.+ ...+..+ |+|+|+++++++.+ +.|.+||+.+++.. ..+..+ . .+.+++|+|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~-~~~~~~~s~dg~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-R-QVYLMRAADDGS- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-S-SCCCEEECTTSC-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-C-cccceeECCCCc-
Confidence 01 1225667 89999999998865 89999999885433 333333 3 578899999999
Q ss_pred EEEEeCCCcEEEEeCCCcccC
Q 028802 138 LGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~~~ 158 (203)
+++++ +.|.+||+.++...
T Consensus 161 l~~~~--~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 161 LYVAG--PDIYKMDVKTGKYT 179 (349)
T ss_dssp EEEES--SSEEEECTTTCCEE
T ss_pred EEEcc--CcEEEEeCCCCcee
Confidence 65554 34999999887643
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.69 E-value=5.3e-16 Score=125.19 Aligned_cols=151 Identities=10% Similarity=-0.008 Sum_probs=104.3
Q ss_pred CcccccCCEEEEEcC-CCeEEEEEcCCCeEEEeecCCc-ccEEEEEEeeCCCEEEEecC---CCeEEEEEcCC--ccc--
Q 028802 1 MTFAADAMKLLGTSG-DGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKVVCGSQ---SGTVLLYSWGY--FKD-- 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~-~~i~~l~~~~~~~~l~~~~~---d~~i~v~d~~~--~~~-- 71 (203)
++|+|||++||+++. +|++.||++.++.... +..+. ..+..++|+|+ +.+++++. +....+|.+.. .+.
T Consensus 27 ~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~ 104 (582)
T 3o4h_A 27 LQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ 104 (582)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE
T ss_pred eecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc
Confidence 478999999999876 9999999997665543 33333 46777777776 55554443 33334433321 100
Q ss_pred --------------------------------------cceeeecCCCCceeEE-EeeCCCEEEEEcCC----CcEEEEE
Q 028802 72 --------------------------------------CSDRFVGLSPNSVDAL-LKLDEDRVITGSEN----GLISLVG 108 (203)
Q Consensus 72 --------------------------------------~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d----g~v~v~d 108 (203)
....+.. +.. ..+ |+|+|++|++++.+ +.|++||
T Consensus 105 ~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d 181 (582)
T 3o4h_A 105 RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSN 181 (582)
T ss_dssp ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEc
Confidence 0111111 111 455 89999999988776 7799999
Q ss_pred ccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCC--cEEEEeCCCcccC
Q 028802 109 ILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDS--MLKLWDLDDILKG 158 (203)
Q Consensus 109 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~ 158 (203)
+.+++.. .+..+.. .+..++|+|||++|+++..++ .|++||+.++...
T Consensus 182 ~~~g~~~-~l~~~~~-~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 182 LSSGGLR-VFDSGEG-SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp TTTCCCE-EECCSSC-EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCCCce-EeecCCC-ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 9888765 5666644 789999999999999887888 8999999887654
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=1.8e-15 Score=113.33 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=113.2
Q ss_pred CEEEEEcCCCeEEEEEcCCCeEEEeecCCcc--cEEEEEEeeCCCEEE-EecCCCeEEEEEcCCccccceeeecCCC---
Q 028802 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE--ELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVGLSP--- 81 (203)
Q Consensus 8 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~--~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~--- 81 (203)
++|++++.++.|++||+.+++.+..+..... .+..++|+|+++.++ ++..++.|.+||+.+ +..+..+.. ..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~-~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-GETLGRIDL-STPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-CCEEEEEEC-CBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC-CCeEeeEEc-CCccc
Confidence 4788999999999999999988877764332 478899999997664 555678999999975 455554542 21
Q ss_pred --CceeEE-EeeCCCEEEEEc------------CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCc
Q 028802 82 --NSVDAL-LKLDEDRVITGS------------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSM 146 (203)
Q Consensus 82 --~~v~~~-~~~~~~~l~~~~------------~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 146 (203)
..+..+ |+|++++++++. .++.|.+||+.+++.+..+... . .+.+++|+|++++|+++ ++.
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-R-QITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-S-SCCCEEECTTSSCEEEE--SSS
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-C-CcceeEECCCCCEEEEe--CCe
Confidence 145667 899999998886 5789999999988887777654 3 57889999999988887 689
Q ss_pred EEEEeCCCcccC
Q 028802 147 LKLWDLDDILKG 158 (203)
Q Consensus 147 i~iwd~~~~~~~ 158 (203)
|++||+.++...
T Consensus 156 i~~~d~~~~~~~ 167 (337)
T 1pby_B 156 LHVMDPEAGTLV 167 (337)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEe
Confidence 999999887643
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.68 E-value=1.3e-16 Score=131.52 Aligned_cols=153 Identities=14% Similarity=0.056 Sum_probs=106.9
Q ss_pred CcccccCCEEEEEcC---------CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc
Q 028802 1 MTFAADAMKLLGTSG---------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 71 (203)
++|||||++|++++. ++.|++||+.+++.+.... ....+..++|+|||+.|+++. ++.|++|++... .
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g-~ 141 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD-P 141 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS-C
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCC-C
Confidence 369999999998876 6899999999987631111 124588899999999999885 789999998643 3
Q ss_pred cceee-ecCCCCce-----------------eEE-EeeCCCEEEEEcCCC------------------------------
Q 028802 72 CSDRF-VGLSPNSV-----------------DAL-LKLDEDRVITGSENG------------------------------ 102 (203)
Q Consensus 72 ~~~~~-~~~~~~~v-----------------~~~-~~~~~~~l~~~~~dg------------------------------ 102 (203)
..... .+ +...+ ..+ |+|+|+.|++++.+.
T Consensus 142 ~~~l~~~~-~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 142 PFQITFNG-RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CEECCCCC-BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred cEEEecCC-CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 32211 11 11111 367 999999999987542
Q ss_pred ----cEEEEEccCCcee---e-----eeccCCCcceEEEEEeCCCCeEEEEeCC----CcEEEEe----CCCcccC
Q 028802 103 ----LISLVGILPNRII---Q-----PIAEHSEYPIESLALSHDRKFLGSISHD----SMLKLWD----LDDILKG 158 (203)
Q Consensus 103 ----~v~v~d~~~~~~~---~-----~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~iwd----~~~~~~~ 158 (203)
.|++||+.+++.+ . .+..+. ..+..++|+||++++++.... ..|.+|| +.++...
T Consensus 221 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 221 NPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD-YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp CCEEEEEEEESSCHHHHCCEECCCCHHHHTSC-EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred CCeeEEEEEECCCCCccceeEccCCccCCCCc-ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 7889999877642 1 123453 368999999998776664422 2488899 7666543
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.68 E-value=1e-15 Score=126.96 Aligned_cols=136 Identities=13% Similarity=0.044 Sum_probs=102.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCccc-----EEEEEEeeCCCEEEEecCC---------CeEEEEEc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEE-----LTSVVLMKNGRKVVCGSQS---------GTVLLYSW 66 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-----i~~l~~~~~~~~l~~~~~d---------~~i~v~d~ 66 (203)
++|+|+|++|+++ |++|++|++.+++....+..|... ...+.|||||++|++++.+ +.+.+||+
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 4799999988886 899999999999877777665432 2447899999999988875 56779999
Q ss_pred CCccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeee-ccCCCcce-----------------E
Q 028802 67 GYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI-AEHSEYPI-----------------E 127 (203)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~-~~~~~~~i-----------------~ 127 (203)
.+ +. ...+.. +...+..+ |+|+|+.|+.+ .++.|++|++.++...... .++.. .+ .
T Consensus 100 ~~-~~-~~~l~~-~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~-~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 100 NK-RQ-LITEER-IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKED-IIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp TT-TE-ECCSSC-CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTT-TEEESBCCHHHHHHTSSSSB
T ss_pred CC-Cc-EEEccc-CCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCcc-ceecCcccccccchhcCCCc
Confidence 75 33 344565 66778888 99999999988 4689999999887655422 22211 12 3
Q ss_pred EEEEeCCCCeEEEEeC
Q 028802 128 SLALSHDRKFLGSISH 143 (203)
Q Consensus 128 ~~~~~~~~~~l~~~~~ 143 (203)
.+.|||||++|+..+.
T Consensus 175 ~~~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQF 190 (740)
T ss_dssp CEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEEEE
Confidence 4899999999998763
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.67 E-value=3.2e-15 Score=123.03 Aligned_cols=154 Identities=11% Similarity=0.020 Sum_probs=113.5
Q ss_pred CcccccCCEEEEEc---------------------------------CCCeEEEEEcCCCeEEEeec--CCcccEEEEEE
Q 028802 1 MTFAADAMKLLGTS---------------------------------GDGTLSVCNLRKNTVQTRSE--FSEEELTSVVL 45 (203)
Q Consensus 1 l~~sp~~~~l~~~~---------------------------------~d~~i~v~d~~~~~~~~~~~--~~~~~i~~l~~ 45 (203)
++|||||++|++++ .+..|++||+.+++...... .+...+.+++|
T Consensus 186 ~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 265 (706)
T 2z3z_A 186 TFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSW 265 (706)
T ss_dssp EEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEE
Confidence 36999999999887 45789999999887654442 45677999999
Q ss_pred eeCCCEEEEecCCC-----eEEEEEcCCccccceeee-cCCCC---ceeEE-Eee--CCCEEEEEcCCCcEEEEEcc-CC
Q 028802 46 MKNGRKVVCGSQSG-----TVLLYSWGYFKDCSDRFV-GLSPN---SVDAL-LKL--DEDRVITGSENGLISLVGIL-PN 112 (203)
Q Consensus 46 ~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~-~~~~~---~v~~~-~~~--~~~~l~~~~~dg~v~v~d~~-~~ 112 (203)
+|+|+.|++++.++ .|++||+.+. .....+. ..... .+..+ |+| +|++++++..++.+++|.+. ++
T Consensus 266 spdg~~l~~~~~~~~~~~~~v~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 266 SPDENILYVAEVNRAQNECKVNAYDAETG-RFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEEETTTC-CEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS
T ss_pred ECCCCEEEEEEeCCCCCeeEEEEEECCCC-ceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC
Confidence 99999999877665 8999998753 2223322 10222 23456 899 99999999999999999876 56
Q ss_pred ceeeeeccCCCcceEE-EEEeCCCCeEEEEeC-CC----cEEEEeCCCcc
Q 028802 113 RIIQPIAEHSEYPIES-LALSHDRKFLGSISH-DS----MLKLWDLDDIL 156 (203)
Q Consensus 113 ~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~-d~----~i~iwd~~~~~ 156 (203)
..+..+..+.. .+.. ++|+|+++.|+.++. ++ .|..|++.++.
T Consensus 345 ~~~~~l~~~~~-~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 345 RLIRQVTKGEW-EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEEEECCCSSS-CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CEEEecCCCCe-EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 67777776633 6766 799999998876654 43 67777876654
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.65 E-value=3.5e-15 Score=113.88 Aligned_cols=151 Identities=9% Similarity=0.093 Sum_probs=106.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcC-CCeEEEeecCC-cccEEEEEEeeCCCE--EEEec-------------CCCeEEE
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLR-KNTVQTRSEFS-EEELTSVVLMKNGRK--VVCGS-------------QSGTVLL 63 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~-~~~i~~l~~~~~~~~--l~~~~-------------~d~~i~v 63 (203)
++|+|+|++|++++.+ .|.+|++. +++........ ...+..++|+|+|++ +++++ .++.+.+
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 4789999999988887 99999997 77664332210 122456889999984 44553 6889999
Q ss_pred EEcCCccccceeee----cCCCCceeEE-EeeCCCEEEEEcC-CCcEEEEEcc-CCcee--eeeccCC-CcceEEEEEeC
Q 028802 64 YSWGYFKDCSDRFV----GLSPNSVDAL-LKLDEDRVITGSE-NGLISLVGIL-PNRII--QPIAEHS-EYPIESLALSH 133 (203)
Q Consensus 64 ~d~~~~~~~~~~~~----~~~~~~v~~~-~~~~~~~l~~~~~-dg~v~v~d~~-~~~~~--~~~~~~~-~~~i~~~~~~~ 133 (203)
|++...+.....+. . +...+..+ |+|+|++++++.. ++.|++|++. +++.. ..+.... ...+..++|+|
T Consensus 124 ~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQ-ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTTCCEEEEEEEEECC-TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EccCCCCcCcceEeeEEeC-CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 99964344433332 1 23457777 9999998887654 6789999998 67643 2333211 23688999999
Q ss_pred CCCeEEEEeC-CCcEEEEeCC
Q 028802 134 DRKFLGSISH-DSMLKLWDLD 153 (203)
Q Consensus 134 ~~~~l~~~~~-d~~i~iwd~~ 153 (203)
+|++|++++. ++.|.+|++.
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCeEEEEEEe
Confidence 9999988774 7899999765
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.63 E-value=6.6e-14 Score=106.82 Aligned_cols=153 Identities=8% Similarity=0.005 Sum_probs=104.7
Q ss_pred CcccccCCE--EEEEc-------------CCCeEEEEEcC-CCeEEEeec----CCcccEEEEEEeeCCCEEEEecC-CC
Q 028802 1 MTFAADAMK--LLGTS-------------GDGTLSVCNLR-KNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQ-SG 59 (203)
Q Consensus 1 l~~sp~~~~--l~~~~-------------~d~~i~v~d~~-~~~~~~~~~----~~~~~i~~l~~~~~~~~l~~~~~-d~ 59 (203)
++|+|+|++ ++++. .++.+.+|++. .++....+. .+...+.+++|+|+|++|++++. ++
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 167 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTAN 167 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCC
Confidence 478999994 45553 68999999997 455443333 24567899999999998887654 67
Q ss_pred eEEEEEcCCcccc--ceeeec-CCCCceeEE-EeeCCCEEEEEcC-CCcEEEEEcc--CCcee---e---eeccCC-C-c
Q 028802 60 TVLLYSWGYFKDC--SDRFVG-LSPNSVDAL-LKLDEDRVITGSE-NGLISLVGIL--PNRII---Q---PIAEHS-E-Y 124 (203)
Q Consensus 60 ~i~v~d~~~~~~~--~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~-dg~v~v~d~~--~~~~~---~---~~~~~~-~-~ 124 (203)
.|++|++...+.. +..+.. .+...+..+ |+|+|+++++++. ++.|.+|++. +++.. . .+.... . .
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 9999999621222 222321 024457777 9999999988775 6889999765 45542 1 222110 1 1
Q ss_pred -------ceEEEE-EeCCCCeEEEEeCC-C-----cEEEEeCC
Q 028802 125 -------PIESLA-LSHDRKFLGSISHD-S-----MLKLWDLD 153 (203)
Q Consensus 125 -------~i~~~~-~~~~~~~l~~~~~d-~-----~i~iwd~~ 153 (203)
.+..++ |+|||++|+++..+ . .|.+|++.
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 378899 99999998776643 2 89999986
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.63 E-value=9.9e-14 Score=105.40 Aligned_cols=153 Identities=14% Similarity=0.167 Sum_probs=103.8
Q ss_pred CcccccCCEEEEEcCC----CeEEEEEcCC--CeE--EEeecCCcccEEEEEEeeCCCEEEEec-CCCeEEEEEcCCccc
Q 028802 1 MTFAADAMKLLGTSGD----GTLSVCNLRK--NTV--QTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKD 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d----~~i~v~d~~~--~~~--~~~~~~~~~~i~~l~~~~~~~~l~~~~-~d~~i~v~d~~~~~~ 71 (203)
|+|+|+|++|++++.+ +.|.+|++.. +.. +.....+......+++ ++++|++++ .++.+.+|++...+.
T Consensus 55 l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~ 132 (361)
T 3scy_A 55 LIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGA 132 (361)
T ss_dssp EEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSC
T ss_pred EEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCc
Confidence 4799999999988875 7999998865 433 3334444556677777 788777666 578999999964332
Q ss_pred ccee---ee--c-------CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCce------e------eeeccCCCcc
Q 028802 72 CSDR---FV--G-------LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRI------I------QPIAEHSEYP 125 (203)
Q Consensus 72 ~~~~---~~--~-------~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~------~------~~~~~~~~~~ 125 (203)
.... +. + .+...+.++ |+|+|+++++++ .++.|.+|++..... + ..+.......
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 212 (361)
T 3scy_A 133 LLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 212 (361)
T ss_dssp BCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC
T ss_pred CcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCC
Confidence 2111 11 1 001223667 899999776655 478999999875331 1 1222222336
Q ss_pred eEEEEEeCCCCeEEEEe-CCCcEEEEeCCCc
Q 028802 126 IESLALSHDRKFLGSIS-HDSMLKLWDLDDI 155 (203)
Q Consensus 126 i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 155 (203)
+.+++|+|+|++|++++ .++.|.+|++.++
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 78999999999888777 6899999998755
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.62 E-value=3.1e-14 Score=108.97 Aligned_cols=151 Identities=11% Similarity=0.034 Sum_probs=111.5
Q ss_pred cccccCCEEEEEcC-CC--eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKLLGTSG-DG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
+|||||++|++++. ++ .|++||+.+++.......+...+..+.|+|+++.|++++.++.|++||+.. +.....+..
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-g~~~~~~~~ 120 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLAT-LEENVVYQV 120 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTT-CCEEEEEEC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCC-Ccceeeeec
Confidence 69999999988876 66 489999999888776666655555678999999999999999999999975 344333443
Q ss_pred CCCCceeEE---EeeCCCEEEEE----------------------cCCCcEEEEEccCCceeeeeccCCCcceEEEEEeC
Q 028802 79 LSPNSVDAL---LKLDEDRVITG----------------------SENGLISLVGILPNRIIQPIAEHSEYPIESLALSH 133 (203)
Q Consensus 79 ~~~~~v~~~---~~~~~~~l~~~----------------------~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~ 133 (203)
+...+... ++|++.+++.. ..+..|++||+.+++..... .+.. .+..+.|+|
T Consensus 121 -~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~-~~~~~~~sp 197 (388)
T 3pe7_A 121 -PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQ-WLGHPIYRP 197 (388)
T ss_dssp -CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESS-CEEEEEEET
T ss_pred -hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCc-cccccEECC
Confidence 44433322 48899988742 23467999999988765444 3323 688999999
Q ss_pred -CCCeEEEEeCC------CcEEEEeCCCcc
Q 028802 134 -DRKFLGSISHD------SMLKLWDLDDIL 156 (203)
Q Consensus 134 -~~~~l~~~~~d------~~i~iwd~~~~~ 156 (203)
+|+.|+....+ ..|.++++.+..
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 99998877653 378888876654
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.62 E-value=9.3e-15 Score=121.18 Aligned_cols=150 Identities=11% Similarity=0.069 Sum_probs=106.8
Q ss_pred cccccCCEEEEEcCC---------CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc
Q 028802 2 TFAADAMKLLGTSGD---------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 72 (203)
+|||||++|++++.+ +.+++||+.+++.. .+..+...+..++|||||+.|+.+. ++.|++|++... ..
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~-~~ 144 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL-PS 144 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS-CC
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC-ce
Confidence 579999999998775 56779999998764 4666777899999999999998874 689999998643 32
Q ss_pred ce-eeecCCCCce-----------------eEE-EeeCCCEEEEEcCCC-------------------------------
Q 028802 73 SD-RFVGLSPNSV-----------------DAL-LKLDEDRVITGSENG------------------------------- 102 (203)
Q Consensus 73 ~~-~~~~~~~~~v-----------------~~~-~~~~~~~l~~~~~dg------------------------------- 102 (203)
.+ +..+ +...+ ..+ |+|||+.|++++.|.
T Consensus 145 ~~lt~~g-~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 145 YRITWTG-KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp EECCSCC-BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred EEEcCCC-CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 22 1112 21111 236 899999999875321
Q ss_pred -----cEEEEEccC---Cc--eeeeecc------CCCcceEEEEEeCCCCeEEEEeC----CCcEEEEeCCCcc
Q 028802 103 -----LISLVGILP---NR--IIQPIAE------HSEYPIESLALSHDRKFLGSISH----DSMLKLWDLDDIL 156 (203)
Q Consensus 103 -----~v~v~d~~~---~~--~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~ 156 (203)
.|++||+.+ +. ....+.. + ...+..++|+|||+.++.... +..|.+||+.++.
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIG-DHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTS-CEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCC-CeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 478899888 63 1222322 4 336889999999997665432 3369999998876
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=7.3e-15 Score=120.07 Aligned_cols=152 Identities=12% Similarity=0.032 Sum_probs=110.3
Q ss_pred CcccccCCEEEEEcCC----------CeEEEEEcCC------CeEEEeec-CCcccEEEEEEeeCCCEEEEecCC-----
Q 028802 1 MTFAADAMKLLGTSGD----------GTLSVCNLRK------NTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQS----- 58 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d----------~~i~v~d~~~------~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d----- 58 (203)
++|||||+.|++++.+ ..|++|++.+ +.. ..+. .+...+..++|+|||++|+.++.+
T Consensus 135 ~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~ 213 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMP 213 (662)
T ss_dssp EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCT
T ss_pred cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCC
Confidence 3799999999988876 5899999987 554 3444 555678889999999999887754
Q ss_pred ---CeEEEEEcCCcc---ccceeeecCCCCceeEE-EeeCCCEEEEEcCCC--cEEEEEccCCceeeeeccCCCc-----
Q 028802 59 ---GTVLLYSWGYFK---DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENG--LISLVGILPNRIIQPIAEHSEY----- 124 (203)
Q Consensus 59 ---~~i~v~d~~~~~---~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg--~v~v~d~~~~~~~~~~~~~~~~----- 124 (203)
..|++||+...+ ........ +...+..+ |+|+|++++++..++ .|++|++.+++.......+...
T Consensus 214 ~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 214 WEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp TTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred CCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 379999997323 23333333 45677888 999999777777777 6777777667655444333211
Q ss_pred --ceEEEEEeCCCCeEEEEeCCCcEEEE--eCCCc
Q 028802 125 --PIESLALSHDRKFLGSISHDSMLKLW--DLDDI 155 (203)
Q Consensus 125 --~i~~~~~~~~~~~l~~~~~d~~i~iw--d~~~~ 155 (203)
.+..++|+|++++++++.. +.++|| |+.++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~ 326 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG 326 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC
Confidence 1467889999999999888 998888 55544
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.59 E-value=4e-13 Score=98.85 Aligned_cols=150 Identities=11% Similarity=0.132 Sum_probs=111.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeec--CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
|+++|+|+++++...++.|.+|+.. ++.+..+. .+...+..++++++++++++...++.|++|+.. +..+..+..
T Consensus 126 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~ 202 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQYLRQIGG 202 (286)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CCEEEEESC
T ss_pred EEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CCEEEEEcc
Confidence 4678999988887788999999964 44544443 344568999999999988887788999999974 344455543
Q ss_pred CC--CCceeEE-EeeCCCEEEEEcCCC-cEEEEEccCCceeeeeccCCC-cceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 79 LS--PNSVDAL-LKLDEDRVITGSENG-LISLVGILPNRIIQPIAEHSE-YPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 79 ~~--~~~v~~~-~~~~~~~l~~~~~dg-~v~v~d~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
. ...+..+ ++++|+++++...++ .|.+|+. .++.+..+..+.. ..+.+++++|+|+.+++ +.++.|++|++.
T Consensus 203 -~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 203 -EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp -TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred -CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 2 2456777 899999888887775 9999995 4666666655422 14779999999987666 579999999986
Q ss_pred Ccc
Q 028802 154 DIL 156 (203)
Q Consensus 154 ~~~ 156 (203)
...
T Consensus 280 ~~~ 282 (286)
T 1q7f_A 280 QLA 282 (286)
T ss_dssp CCC
T ss_pred ccc
Confidence 543
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.59 E-value=1.4e-13 Score=105.27 Aligned_cols=153 Identities=12% Similarity=0.013 Sum_probs=108.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEE--EeeCCCEEEEe----------------------c
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVV--LMKNGRKVVCG----------------------S 56 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~--~~~~~~~l~~~----------------------~ 56 (203)
++|||+|+.|++++.++.|++||+.+++.......+...+.... ++|++.+++.. .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccC
Confidence 36999999999999999999999999877665555555554444 47899888742 2
Q ss_pred CCCeEEEEEcCCccccceeeecCCCCceeEE-Eee-CCCEEEEEcCC------CcEEEEEccCCceeeeeccCCC-cceE
Q 028802 57 QSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKL-DEDRVITGSEN------GLISLVGILPNRIIQPIAEHSE-YPIE 127 (203)
Q Consensus 57 ~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d------g~v~v~d~~~~~~~~~~~~~~~-~~i~ 127 (203)
.+..|.+||+.+ +. ...+.. +...+..+ |+| +|+.|+.+... ..|.++++..+... .+..+.. ..+.
T Consensus 166 ~~~~l~~~d~~~-g~-~~~l~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~ 241 (388)
T 3pe7_A 166 PCCRLMRVDLKT-GE-STVILQ-ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCT 241 (388)
T ss_dssp CCEEEEEEETTT-CC-EEEEEE-ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEE
T ss_pred CcceEEEEECCC-Cc-eEEeec-CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccc
Confidence 346799999874 33 344545 56667777 999 99998877653 36888887655443 3433322 2577
Q ss_pred EEEEeCCCCeEEEEeC-CC----cEEEEeCCCccc
Q 028802 128 SLALSHDRKFLGSISH-DS----MLKLWDLDDILK 157 (203)
Q Consensus 128 ~~~~~~~~~~l~~~~~-d~----~i~iwd~~~~~~ 157 (203)
.++|+|||+.|+..+. ++ .|++||+.++..
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 8899999998865542 22 399999988753
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.58 E-value=7.1e-14 Score=114.26 Aligned_cols=150 Identities=11% Similarity=-0.012 Sum_probs=107.1
Q ss_pred cccCCE-EEEEcC-CCeEEEEEcC--C-CeEEEeecC-----CcccEEEEEEeeCCCEEEEecCC----------CeEEE
Q 028802 4 AADAMK-LLGTSG-DGTLSVCNLR--K-NTVQTRSEF-----SEEELTSVVLMKNGRKVVCGSQS----------GTVLL 63 (203)
Q Consensus 4 sp~~~~-l~~~~~-d~~i~v~d~~--~-~~~~~~~~~-----~~~~i~~l~~~~~~~~l~~~~~d----------~~i~v 63 (203)
||||+. |+.++. +..|+++++. + +. ...+.. +...+..++|+|||+.|++++.+ ..|++
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 499998 776654 5678888876 3 43 344544 56778999999999999988876 58999
Q ss_pred EEcCCcc----ccceeee-cCCCCceeEE-EeeCCCEEEEEcCC--------CcEEEEEcc-CC---ceeeeeccCCCcc
Q 028802 64 YSWGYFK----DCSDRFV-GLSPNSVDAL-LKLDEDRVITGSEN--------GLISLVGIL-PN---RIIQPIAEHSEYP 125 (203)
Q Consensus 64 ~d~~~~~----~~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d--------g~v~v~d~~-~~---~~~~~~~~~~~~~ 125 (203)
||+.... .....+. . +...+..+ |+|+|++|++++.+ ..|++||+. ++ +.......+ ...
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~ 243 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDD-AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEA 243 (662)
T ss_dssp EETTSTTTTCGGGSEESSCS-CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBC
T ss_pred EECCCCccccCCceeEEEec-CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-Cce
Confidence 9986410 2334444 4 55566666 99999999988755 379999998 56 444333443 337
Q ss_pred eEEEEEeCCCCeEEEEeCCC--cEEEEeCCCcc
Q 028802 126 IESLALSHDRKFLGSISHDS--MLKLWDLDDIL 156 (203)
Q Consensus 126 i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~ 156 (203)
+..+.|+|||++++++..++ .|.+|++.++.
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 89999999999777777777 67777765554
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.56 E-value=7.9e-13 Score=99.52 Aligned_cols=154 Identities=11% Similarity=0.009 Sum_probs=114.4
Q ss_pred CcccccCCEEEEEcCC------------------------CeEEEEEcCCCeEEEeec-CCcccEEEEEEeeCCCEEEEe
Q 028802 1 MTFAADAMKLLGTSGD------------------------GTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCG 55 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d------------------------~~i~v~d~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~ 55 (203)
|+++|+|+++++...+ +.|.+||..+++.+..+. .+-..+..++++|+++++++.
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d 108 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTD 108 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEE
Confidence 5789999988887776 479999998888766554 344578899999999988888
Q ss_pred cCCCeEEEEEcCCccccceeee---------cCCCCceeEE-Eee-CCCEEEEEc-CCCcEEEEEccCCceeeeeccCCC
Q 028802 56 SQSGTVLLYSWGYFKDCSDRFV---------GLSPNSVDAL-LKL-DEDRVITGS-ENGLISLVGILPNRIIQPIAEHSE 123 (203)
Q Consensus 56 ~~d~~i~v~d~~~~~~~~~~~~---------~~~~~~v~~~-~~~-~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~~ 123 (203)
..++.|++|+.......+..+. . +...+..+ ++| ++.++++.+ .++.|++|+ ..+..+..+.....
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~-~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~ 186 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQN-HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESS 186 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTT-CCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECC
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCcc-ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCC
Confidence 8899999999753211344442 2 23356777 899 788888876 689999999 56777666642211
Q ss_pred ---------cceEEEEEeCC-CCeEEEEeCCCcEEEEeCCCcc
Q 028802 124 ---------YPIESLALSHD-RKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 124 ---------~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
.....++++|+ +..+++...++.|++|+..++.
T Consensus 187 ~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 187 GSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp SSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 13789999998 6666777788999999998544
No 171
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=2.9e-13 Score=111.71 Aligned_cols=153 Identities=8% Similarity=-0.016 Sum_probs=105.8
Q ss_pred CcccccCCEEEEEcCCC-----eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCe---------------
Q 028802 1 MTFAADAMKLLGTSGDG-----TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT--------------- 60 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~--------------- 60 (203)
++|||||++|+.+..++ .|++||+.+++.+..... ...+..++|+|||+.|+.++.++.
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 36999999998775433 899999999877653222 223667999999999998887655
Q ss_pred -EEEEEcCCcccc-ceeeec-CCCCceeEE-EeeCCCEEEEEcC-----CCcEEEEEccC------Cc-eeeeeccCCCc
Q 028802 61 -VLLYSWGYFKDC-SDRFVG-LSPNSVDAL-LKLDEDRVITGSE-----NGLISLVGILP------NR-IIQPIAEHSEY 124 (203)
Q Consensus 61 -i~v~d~~~~~~~-~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~-----dg~v~v~d~~~------~~-~~~~~~~~~~~ 124 (203)
|++|++.+.... ...+.. .+...+..+ |+|+|++|+..+. +..|++||+.+ +. ....+..+..
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~- 287 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE- 287 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-
Confidence 999999753221 111222 023335566 8999999988765 56899999986 43 3455555534
Q ss_pred ceEEEEEeCCCCeEEEEeCC----CcEEEEeCCCcc
Q 028802 125 PIESLALSHDRKFLGSISHD----SMLKLWDLDDIL 156 (203)
Q Consensus 125 ~i~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~ 156 (203)
.+.. .|+|+|..|+..+.. ..|.+|++.++.
T Consensus 288 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 4443 588999988766643 369999998763
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.51 E-value=8.7e-14 Score=106.52 Aligned_cols=151 Identities=9% Similarity=-0.060 Sum_probs=102.6
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEE-------------------EEEeeCCCEEEEe-----cC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTS-------------------VVLMKNGRKVVCG-----SQ 57 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-------------------l~~~~~~~~l~~~-----~~ 57 (203)
.|||+|++|++++.++.|++|++.+++.......+...... +.|+|+++.++.. ..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 87 FISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred eECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 58999999999998899999999888665544433332222 2456666665543 34
Q ss_pred CCeEEEEEcCCccccceeeecCCCCceeEE-Eee-CCCEEEEEcCC------CcEEEEEccCCceeeeeccCC-CcceEE
Q 028802 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKL-DEDRVITGSEN------GLISLVGILPNRIIQPIAEHS-EYPIES 128 (203)
Q Consensus 58 d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d------g~v~v~d~~~~~~~~~~~~~~-~~~i~~ 128 (203)
+..|++||+.. +.. ..+.. +...+..+ |+| ++..|+..+.+ ..|.+|++..+....... +. ...+..
T Consensus 167 ~~~l~~~d~~~-g~~-~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~ 242 (396)
T 3c5m_A 167 TCRLIKVDIET-GEL-EVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTH 242 (396)
T ss_dssp CEEEEEEETTT-CCE-EEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEE
T ss_pred cceEEEEECCC-CcE-Eeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccc
Confidence 56899999864 333 33334 56667777 899 78877766543 368889987655433333 31 225788
Q ss_pred EEEeCCCCeEEEEeCC-----CcEEEEeCCCcc
Q 028802 129 LALSHDRKFLGSISHD-----SMLKLWDLDDIL 156 (203)
Q Consensus 129 ~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 156 (203)
++|+|+|++|+..+.+ +.|++||+.++.
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 9999999988776543 449999998764
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.50 E-value=1.9e-12 Score=98.71 Aligned_cols=64 Identities=11% Similarity=0.195 Sum_probs=55.4
Q ss_pred EeeCCCEEEEEcC-----------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 88 LKLDEDRVITGSE-----------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 88 ~~~~~~~l~~~~~-----------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
++|+++.++++.. .+.|.+||+.+++.+..+..+. +.+++|+|+|++|++++. +.|.+||+.++
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 7899888887643 3479999999999999998773 789999999999998886 99999999988
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.50 E-value=1.1e-12 Score=98.77 Aligned_cols=151 Identities=11% Similarity=0.070 Sum_probs=108.9
Q ss_pred Ccccc-cCCEEEEEc-CCCeEEEEEcCCCeEEEeecC----------CcccEEEEEEeeC-CCEEEEecCCCeEEEEEcC
Q 028802 1 MTFAA-DAMKLLGTS-GDGTLSVCNLRKNTVQTRSEF----------SEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWG 67 (203)
Q Consensus 1 l~~sp-~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~----------~~~~i~~l~~~~~-~~~l~~~~~d~~i~v~d~~ 67 (203)
|+|+| ++.++++.+ .++.|++|+ .++..+..+.. +-.....++++|+ +.++++...++.|++|+..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 47888 788777776 689999999 55666665532 2234789999998 6777777788999999986
Q ss_pred Cccccceeeec-CCCCceeEE-Eee------CCCEEEEEcCCCcEEEEEccCCceeeeec---cCCCcceEEEEEeCCCC
Q 028802 68 YFKDCSDRFVG-LSPNSVDAL-LKL------DEDRVITGSENGLISLVGILPNRIIQPIA---EHSEYPIESLALSHDRK 136 (203)
Q Consensus 68 ~~~~~~~~~~~-~~~~~v~~~-~~~------~~~~l~~~~~dg~v~v~d~~~~~~~~~~~---~~~~~~i~~~~~~~~~~ 136 (203)
+ +..+..+.. .+...+..+ ++| ++...++......|++|++.+++.+..+. .+.. .+..++++|+|.
T Consensus 227 ~-G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~-~p~~ia~~~dG~ 304 (329)
T 3fvz_A 227 T-KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD-MPHDIVASEDGT 304 (329)
T ss_dssp T-CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS-SEEEEEECTTSE
T ss_pred C-CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC-CeeEEEECCCCC
Confidence 3 455555532 034456677 777 33322223345589999999999888773 3323 689999999997
Q ss_pred eEEEEeCCCcEEEEeCCC
Q 028802 137 FLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~ 154 (203)
.+++...++.|++|++..
T Consensus 305 lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEESSSCCEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 778888899999999864
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.48 E-value=5.7e-12 Score=94.58 Aligned_cols=150 Identities=17% Similarity=0.163 Sum_probs=106.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC----CeEEEEEcCCccccceee
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~ 76 (203)
++|+|+|++++++..++.|++|+..+++.......+...+.+++++|+++++++...+ +.|.+||... +.....+
T Consensus 50 ~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-~~~~~~~ 128 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-DNLQDII 128 (333)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-CSCEEEE
T ss_pred cEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-CEEEEEE
Confidence 3688999988888888999999998877655443456779999999999988877666 6899999864 2222122
Q ss_pred e--cCCCCceeEE-EeeCCCEEEEEcC------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEE-eCCCc
Q 028802 77 V--GLSPNSVDAL-LKLDEDRVITGSE------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI-SHDSM 146 (203)
Q Consensus 77 ~--~~~~~~v~~~-~~~~~~~l~~~~~------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~ 146 (203)
. . ....+..+ ++|+|.++++... .+.|..++..+++........ . .+..++|+|++++|+.+ ..++.
T Consensus 129 ~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~-~~~~i~~~~dg~~l~v~~~~~~~ 205 (333)
T 2dg1_A 129 EDLS-TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI-S-VANGIALSTDEKVLWVTETTANR 205 (333)
T ss_dssp CSSS-SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE-S-SEEEEEECTTSSEEEEEEGGGTE
T ss_pred ccCc-cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC-C-cccceEECCCCCEEEEEeCCCCe
Confidence 2 2 23457777 8999988776653 355777776555443322222 2 57889999999876544 46789
Q ss_pred EEEEeCCC
Q 028802 147 LKLWDLDD 154 (203)
Q Consensus 147 i~iwd~~~ 154 (203)
|.+|++.+
T Consensus 206 i~~~d~~~ 213 (333)
T 2dg1_A 206 LHRIALED 213 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEecC
Confidence 99999853
No 176
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.47 E-value=6.4e-13 Score=101.75 Aligned_cols=139 Identities=10% Similarity=0.108 Sum_probs=104.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe-----------EEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-----------VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~-----------~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~ 69 (203)
|++++...++++|+.+ .+.+|++.... ....+ .+.. |+.++| ++.+|+++ .++.|++||+...
T Consensus 43 Lais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl 116 (388)
T 1xip_A 43 LDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEEL 116 (388)
T ss_dssp EEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSST
T ss_pred EEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhh
Confidence 4688889999999886 56669865322 11122 2445 999999 89999998 8899999999754
Q ss_pred cccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEE
Q 028802 70 KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLK 148 (203)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 148 (203)
. ....... +...+..+ +.+. .+++++.+|.|.+||+..+.... + .. .|++++|+|+| ++.+..||.|+
T Consensus 117 ~-~~~~~~~-~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~---~~-~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 117 S-EFRTVTS-FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L---AQ-NVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp T-CEEEEEE-CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-E---EE-SEEEEEECSSE--EEEEETTSCEE
T ss_pred h-ccCccce-eecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-c---cC-CceEEEEcCCc--eEEEEcCCcEE
Confidence 3 3344555 66667776 4332 38888999999999999877653 2 12 69999999999 67888999999
Q ss_pred EEeCCCcc
Q 028802 149 LWDLDDIL 156 (203)
Q Consensus 149 iwd~~~~~ 156 (203)
+|+..+..
T Consensus 186 ~~~~~~~~ 193 (388)
T 1xip_A 186 SFAWRNGE 193 (388)
T ss_dssp EEEEETTE
T ss_pred EEcCCCcc
Confidence 99887766
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.47 E-value=9.4e-12 Score=102.75 Aligned_cols=155 Identities=11% Similarity=0.010 Sum_probs=109.6
Q ss_pred CcccccCCEEEEEcCCCe----------------EEEEEcCCCe----EEEeecCCcccEEEEEEeeCCCEEEEecC---
Q 028802 1 MTFAADAMKLLGTSGDGT----------------LSVCNLRKNT----VQTRSEFSEEELTSVVLMKNGRKVVCGSQ--- 57 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~----------------i~v~d~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--- 57 (203)
++|+|||+.|++++.++. |++|++.++. ++.....+...+..+.|+|+|++|+.++.
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC
Confidence 479999999999887765 9999998764 22233334556789999999999887664
Q ss_pred --CCeEEEEEcCC------ccccceeeecCCCCceeEEEeeCCCEEEEEcCC----CcEEEEEccCCce--eeeeccCCC
Q 028802 58 --SGTVLLYSWGY------FKDCSDRFVGLSPNSVDALLKLDEDRVITGSEN----GLISLVGILPNRI--IQPIAEHSE 123 (203)
Q Consensus 58 --d~~i~v~d~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d----g~v~v~d~~~~~~--~~~~~~~~~ 123 (203)
+..|++||+.. .......+.. +...+...|+|+|..|+..+.. +.|.+|++.++.. ...+..+..
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 334 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLID-NFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE 334 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred CCccEEEEEECcccccccCCccceEEeeC-CCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC
Confidence 56899999864 2224556666 6666655689999988877653 3599999987642 234444422
Q ss_pred -cceEEEEEeCCCCeEEEEeCCCc--EEEEeCCCcc
Q 028802 124 -YPIESLALSHDRKFLGSISHDSM--LKLWDLDDIL 156 (203)
Q Consensus 124 -~~i~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~~ 156 (203)
..+..++|++++.++++...++. |.+|++.++.
T Consensus 335 ~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 335 KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 25788999977777788887874 6667774443
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.45 E-value=6.5e-13 Score=101.62 Aligned_cols=152 Identities=10% Similarity=-0.026 Sum_probs=102.4
Q ss_pred CcccccCCEEEEEcC---CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee
Q 028802 1 MTFAADAMKLLGTSG---DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (203)
Q Consensus 1 l~~sp~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 77 (203)
++|||+|++|+.+.. +..|++|++.+++.......+......+.|+|+|++|++++.++.|++|++.. +.......
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-~~~~~~~~ 119 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLET-LEEQVIYT 119 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT-CCEEEEEE
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCC-CCcEEEEe
Confidence 469999999877644 24789999988876544333322233378999999999999888999999864 33333333
Q ss_pred cCCCCceeE-------------------E-EeeCCCEEEEE-----cCCCcEEEEEccCCceeeeeccCCCcceEEEEEe
Q 028802 78 GLSPNSVDA-------------------L-LKLDEDRVITG-----SENGLISLVGILPNRIIQPIAEHSEYPIESLALS 132 (203)
Q Consensus 78 ~~~~~~v~~-------------------~-~~~~~~~l~~~-----~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~ 132 (203)
. +...... + ++|+++.++.. ..+..|++||+.+++...... +.. .+..+.|+
T Consensus 120 ~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~-~~~~~~~s 196 (396)
T 3c5m_A 120 V-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTA-WLGHPIYR 196 (396)
T ss_dssp C-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESS-CEEEEEEE
T ss_pred c-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CCc-ccccceEC
Confidence 2 2221111 2 46667666554 345679999998887665443 323 68899999
Q ss_pred C-CCCeEEEEeCC------CcEEEEeCCCcc
Q 028802 133 H-DRKFLGSISHD------SMLKLWDLDDIL 156 (203)
Q Consensus 133 ~-~~~~l~~~~~d------~~i~iwd~~~~~ 156 (203)
| ++..|+..+.+ ..|.+|++.+..
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCC
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCc
Confidence 9 78877766543 468899986653
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.44 E-value=9.6e-13 Score=108.43 Aligned_cols=150 Identities=9% Similarity=-0.030 Sum_probs=99.8
Q ss_pred CcccccCCEEEEE-----cCCCeEEEEEcCCCeEE-E-eecCCcccEEEEEEeeCCCEEEEecCCCe-------------
Q 028802 1 MTFAADAMKLLGT-----SGDGTLSVCNLRKNTVQ-T-RSEFSEEELTSVVLMKNGRKVVCGSQSGT------------- 60 (203)
Q Consensus 1 l~~sp~~~~l~~~-----~~d~~i~v~d~~~~~~~-~-~~~~~~~~i~~l~~~~~~~~l~~~~~d~~------------- 60 (203)
++|||||++||.+ +.+.+|++||+.+++.+ . .+.. .....++|+|||+.|++++.+..
T Consensus 126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCE
T ss_pred EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCccccCCCCCE
Confidence 3699999999843 34578999999998764 1 1111 11267899999999999887665
Q ss_pred EEEEEcCCccc---cceeeecCCCCceeEE-EeeCCCEEEEEcCCC----cEEEEEccCCceeeeeccCCCcceEEEEEe
Q 028802 61 VLLYSWGYFKD---CSDRFVGLSPNSVDAL-LKLDEDRVITGSENG----LISLVGILPNRIIQPIAEHSEYPIESLALS 132 (203)
Q Consensus 61 i~v~d~~~~~~---~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg----~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~ 132 (203)
|++|++.+... .+..... +...+..+ |+|+|++|++.+.++ .|++++..++... .+..+.. .+....+
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~-~~~~~~~- 279 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTG-DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVG-AKYEVHA- 279 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCC-CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSS-CCEEEEE-
T ss_pred EEEEECCCCchhceEEEecCC-CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCC-ceEEEEe-
Confidence 99999975432 1112222 33456677 899999999887665 6777776555433 3444433 4556666
Q ss_pred CCCCeEEEEe---CCCcEEEEeCCCcc
Q 028802 133 HDRKFLGSIS---HDSMLKLWDLDDIL 156 (203)
Q Consensus 133 ~~~~~l~~~~---~d~~i~iwd~~~~~ 156 (203)
++|.+++... .++.|.+|++.++.
T Consensus 280 ~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 280 WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 5666434433 25789999997764
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.44 E-value=2.7e-11 Score=97.46 Aligned_cols=150 Identities=9% Similarity=0.034 Sum_probs=111.9
Q ss_pred ccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcC-CccccceeeecCCCCc
Q 028802 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG-YFKDCSDRFVGLSPNS 83 (203)
Q Consensus 5 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~ 83 (203)
|.+.++++...++.|.++|..+++.+..+... ..+..+.|+|+++++++++.++.|.+||+. .....+..+.. .. .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~-~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GS-E 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CS-E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CC-C
Confidence 33446677778899999999999988888653 356789999999999999999999999994 12355555654 33 3
Q ss_pred eeEE-Ee----eCCCEEEEEcC-CCcEEEEEccCCceeeeeccCC----------C------------------------
Q 028802 84 VDAL-LK----LDEDRVITGSE-NGLISLVGILPNRIIQPIAEHS----------E------------------------ 123 (203)
Q Consensus 84 v~~~-~~----~~~~~l~~~~~-dg~v~v~d~~~~~~~~~~~~~~----------~------------------------ 123 (203)
...+ |+ |+|+++++++. .+.|.++|..+.+.+..+.... .
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 4566 88 69999998876 5889999988877665543210 0
Q ss_pred --------------------cceEEEEEeCCCCeEEEEe-CCCcEEEEeCCCccc
Q 028802 124 --------------------YPIESLALSHDRKFLGSIS-HDSMLKLWDLDDILK 157 (203)
Q Consensus 124 --------------------~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~ 157 (203)
.....+.|+|+|+++++++ .++.|.++|+.++..
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 0123567999999887666 678899999988753
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.43 E-value=6.8e-12 Score=92.28 Aligned_cols=145 Identities=11% Similarity=0.070 Sum_probs=113.2
Q ss_pred ccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCc-ccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC-C
Q 028802 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP-N 82 (203)
Q Consensus 5 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-~ 82 (203)
..++.|++++.++.|.+||..+++.+..+..+. ..+.++.++|+|++|++ .++.|+.||. + ++.+..+.. .. .
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~-G~~~W~~~~-~~~~ 77 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-D-GRELWNIAA-PAGC 77 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-T-SCEEEEEEC-CTTC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-C-CCEEEEEcC-CCCc
Confidence 346889999999999999999999999998765 46889999999998883 4678999997 3 566666665 42 4
Q ss_pred ceeEE-EeeCCCEEEEEcC-CCcEEEEEccCCceeeeeccCCC-----cceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 83 SVDAL-LKLDEDRVITGSE-NGLISLVGILPNRIIQPIAEHSE-----YPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 83 ~v~~~-~~~~~~~l~~~~~-dg~v~v~d~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
.+.++ +.|+|+++++.+. .+.|..++. +|+.+..+..... .....+.+.++|++|++...++.|..||.. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 56666 7899999999887 777888885 6777766542211 134556789999999999999999999987 5
Q ss_pred c
Q 028802 156 L 156 (203)
Q Consensus 156 ~ 156 (203)
+
T Consensus 156 ~ 156 (276)
T 3no2_A 156 Q 156 (276)
T ss_dssp C
T ss_pred C
Confidence 4
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.43 E-value=3.5e-11 Score=88.44 Aligned_cols=148 Identities=9% Similarity=0.150 Sum_probs=107.7
Q ss_pred cc-cccCCEEEEEcC-CCeEEEEEcCCCeEEEeec-CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee-
Q 028802 2 TF-AADAMKLLGTSG-DGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV- 77 (203)
Q Consensus 2 ~~-sp~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~- 77 (203)
++ .++++++++... ++.|++|+ .+++.+..+. .+...+..++++|+++++++...++.|.+|+.. +..+..+.
T Consensus 83 ~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~ 159 (286)
T 1q7f_A 83 AVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGC 159 (286)
T ss_dssp EEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEEC
T ss_pred EEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CCEEEEeCC
Confidence 45 356666665533 78999999 5566666554 334568999999999988887788999999964 34444443
Q ss_pred -cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCC-CcceEEEEEeCCCCeEEEEeCCC-cEEEEeCC
Q 028802 78 -GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSISHDS-MLKLWDLD 153 (203)
Q Consensus 78 -~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~-~i~iwd~~ 153 (203)
. +...+..+ ++|+++++++...++.|++|+. .++.+..+..+. ...+..++++++|+++++...++ .|.+|+..
T Consensus 160 ~~-~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 160 SK-HLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp TT-TCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CC-ccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 2 33456778 8999998877778899999997 456665664431 12688999999998888887775 99999965
Q ss_pred C
Q 028802 154 D 154 (203)
Q Consensus 154 ~ 154 (203)
.
T Consensus 238 g 238 (286)
T 1q7f_A 238 G 238 (286)
T ss_dssp S
T ss_pred C
Confidence 4
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.43 E-value=8.9e-12 Score=91.66 Aligned_cols=148 Identities=7% Similarity=-0.017 Sum_probs=114.8
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCC-cccEEEEEEeeCCCEEEEecC-CCeEEEEEcCCccccceeeecC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
+++|+|++|++ .++.|..||. +++.+..+..+ ...+.++.+.++|+.+++.+. ++.+..++. .++.+..+...
T Consensus 43 ~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~--~Gk~l~~~~~~ 117 (276)
T 3no2_A 43 AATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM--KGEVLSKTEFE 117 (276)
T ss_dssp EECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT--TSCEEEEEEEC
T ss_pred EECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC--CCCEEEEEecc
Confidence 57899998883 4688999998 88888888765 357888999999999998876 777777775 34555444320
Q ss_pred -----CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 80 -----SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 80 -----~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
+......+ ..++|+++++...++.|.+||.. |+.+..+... . .+.++...++|+.++++..++.|..+|..
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-G-TPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-S-CCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-C-CccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 11123334 68899999999999999999988 9999888765 3 46678889999999998888899999998
Q ss_pred Cccc
Q 028802 154 DILK 157 (203)
Q Consensus 154 ~~~~ 157 (203)
+++.
T Consensus 195 tG~~ 198 (276)
T 3no2_A 195 SNRI 198 (276)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 7654
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.43 E-value=1.4e-11 Score=91.03 Aligned_cols=147 Identities=10% Similarity=0.014 Sum_probs=104.8
Q ss_pred CcccccCC-EEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-
Q 028802 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (203)
Q Consensus 1 l~~sp~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~- 78 (203)
++|+|+++ +++++..++.|.+|+..++ ...+..+...+.+++++|+++++++...++.|.+||..+ +........
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~ 109 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG-GEWESIADSF 109 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT-CCEEEEECEE
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC-CcEEEEeecc
Confidence 47999998 7788888899999999887 455555667799999999999888877778999999853 232221111
Q ss_pred --CCCCceeEE-EeeCCCEEEE----Ec-------------CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeE
Q 028802 79 --LSPNSVDAL-LKLDEDRVIT----GS-------------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (203)
Q Consensus 79 --~~~~~v~~~-~~~~~~~l~~----~~-------------~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (203)
.....+..+ ++|+|+++++ ++ ..+.|..++.. ++.. .+..+.. ....++|+|+++.|
T Consensus 110 ~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~-~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDRV-KPNGLAFLPSGNLL 186 (296)
T ss_dssp TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCCS-SEEEEEECTTSCEE
T ss_pred CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCCC-CCccEEECCCCCEE
Confidence 011234566 8999998887 33 13456666654 4433 3333323 57899999999998
Q ss_pred EEEeCCCcEEEEeCC
Q 028802 139 GSISHDSMLKLWDLD 153 (203)
Q Consensus 139 ~~~~~d~~i~iwd~~ 153 (203)
++.+.++.|.+|++.
T Consensus 187 v~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 187 VSDTGDNATHRYCLN 201 (296)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEeCCCCeEEEEEEC
Confidence 777778999999986
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.42 E-value=5.2e-12 Score=95.19 Aligned_cols=140 Identities=14% Similarity=0.160 Sum_probs=97.7
Q ss_pred CcccccCCEEEEEcC---------------------------CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEE
Q 028802 1 MTFAADAMKLLGTSG---------------------------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV 53 (203)
Q Consensus 1 l~~sp~~~~l~~~~~---------------------------d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~ 53 (203)
++|+|+|+.|++++. ...|++|++.+++.+..+.. . .+..+.|+|+| +++
T Consensus 109 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 109 LEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVV 185 (347)
T ss_dssp EEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEE
T ss_pred eeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEE
Confidence 469999999888763 25799999998876444444 3 78889999999 777
Q ss_pred EecCCC-------eEEEEEcCCccccceeeecCCCCceeEEEeeCCCEEEEEcCC--------CcEEEEEccCCceeeee
Q 028802 54 CGSQSG-------TVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSEN--------GLISLVGILPNRIIQPI 118 (203)
Q Consensus 54 ~~~~d~-------~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d--------g~v~v~d~~~~~~~~~~ 118 (203)
++..+. ...+|.+. .+ ....+.. + ..+..+ +|+|+.|++++.+ ..|.+|| +++.....
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d-~~-~~~~l~~-~-~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE-DG-KEEKMFE-K-VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE-TT-EEEEEEE-E-ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred EEecccccccccccccEEEeC-CC-ceEEecc-C-cceeeE-CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 765432 34555544 23 3344554 4 444444 9999998877644 3688888 56555444
Q ss_pred ccCCCcceEE-EEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 119 AEHSEYPIES-LALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 119 ~~~~~~~i~~-~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
..+ ...+.. +.|+ ++ .+++++.++.+++| +.+
T Consensus 259 ~~~-~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 259 DEV-DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp TTC-CSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred ccC-CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 444 336776 8999 88 88888899999999 863
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.41 E-value=1.9e-11 Score=88.97 Aligned_cols=153 Identities=7% Similarity=-0.070 Sum_probs=107.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+++|+|+++++...++.|.+|+..+.............+.+++++++++++++...++.|.+|+.... ........ .
T Consensus 113 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~-~ 190 (270)
T 1rwi_B 113 LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-NQVVLPFT-D 190 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-CEEECCCS-S
T ss_pred eEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-ceEeeccc-C
Confidence 467888987777777889999976554333222233345778999999997777777889999998642 22222222 3
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
...+..+ ++++|.++++...++.|.+|+............+ ...+.+++++++|+.+++...++.|++|++...+
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG-LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCS-CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCC-CCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 3556777 7999977777777889999998654433222222 1268899999999988888889999999986554
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.40 E-value=1.2e-11 Score=93.14 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=92.9
Q ss_pred CcccccCCEEEEEcCC---C--eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC-----------------
Q 028802 1 MTFAADAMKLLGTSGD---G--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----------------- 58 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d---~--~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----------------- 58 (203)
++|||||++|++++.+ + .|++|++.+++.......+ . +..++|+|+++.|+.++.+
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 3699999999887643 2 4888898888765544433 3 8999999999998887632
Q ss_pred ----------CeEEEEEcCCccccceeeecCCCCceeEE-EeeCCCEEEEEcCCC-------cEEEEEccCCceeeeecc
Q 028802 59 ----------GTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENG-------LISLVGILPNRIIQPIAE 120 (203)
Q Consensus 59 ----------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg-------~v~v~d~~~~~~~~~~~~ 120 (203)
..|++||+.. +..+..+.. . .+..+ |+|+| +++++..+. ...+|.+.+++. ..+..
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~-~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~ 215 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTES-EEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFE 215 (347)
T ss_dssp --------CEEEEEEEETTT-TEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEE
T ss_pred cCcccccCccceEEEEECCC-CeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEecc
Confidence 5688899864 333244554 2 56667 89999 777665432 334444444443 33433
Q ss_pred CCCcceEEEEEeCCCCeEEEEeCC--------CcEEEEe
Q 028802 121 HSEYPIESLALSHDRKFLGSISHD--------SMLKLWD 151 (203)
Q Consensus 121 ~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~iwd 151 (203)
+ . .+..+ +|+|++|+.++.+ ..|.+||
T Consensus 216 ~-~-~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 216 K-V-SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp E-E-SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred C-c-ceeeE--CCCCCEEEEEEccccCCccccceEEEEC
Confidence 3 2 45544 9999998877744 3688888
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.39 E-value=4.1e-11 Score=90.16 Aligned_cols=150 Identities=10% Similarity=-0.002 Sum_probs=106.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCc-----ccEEEEEEeeCCCEEEEec--CCCeEEEEEcCCccccc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-----EELTSVVLMKNGRKVVCGS--QSGTVLLYSWGYFKDCS 73 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~ 73 (203)
|+++++++.+++...++.|.+||..+++....+.... .....+++ . +..|+++. .++.|.++|+.+ ....
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t-~~~~ 165 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTET-DKVV 165 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTT-TEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCC-CeEE
Confidence 4677888544444478999999999998877665432 14556777 3 44555544 488999999975 4555
Q ss_pred eeeecCCCCceeEE-EeeCCCEEEEEcCC----------CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 74 DRFVGLSPNSVDAL-LKLDEDRVITGSEN----------GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~~~~l~~~~~d----------g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
..+.. .. ....+ ++|+|++++++..+ +.|.++|..+++....+..........++|+|++++|+++.
T Consensus 166 ~~i~~-g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 166 DELTI-GI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEEC-SS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEEc-CC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 55554 33 33455 79999877776554 78999999988877666543222578999999999988775
Q ss_pred CCCcEEEEeCCCccc
Q 028802 143 HDSMLKLWDLDDILK 157 (203)
Q Consensus 143 ~d~~i~iwd~~~~~~ 157 (203)
. .|.+||+.++..
T Consensus 244 ~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 244 N--DIWRMPVEADRV 256 (328)
T ss_dssp S--SEEEEETTCSSC
T ss_pred c--EEEEEECCCCce
Confidence 4 899999987664
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.39 E-value=2.6e-11 Score=92.52 Aligned_cols=143 Identities=12% Similarity=0.099 Sum_probs=105.7
Q ss_pred ccCCEEEEEc------CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC----------CCeEEEEEcCC
Q 028802 5 ADAMKLLGTS------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ----------SGTVLLYSWGY 68 (203)
Q Consensus 5 p~~~~l~~~~------~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~----------d~~i~v~d~~~ 68 (203)
++++++++.. .|+.|++||..+++.+..+..+..+ .++|+|+++++++++. ++.|.+||+.+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3677776653 3679999999999888888766555 8999999999998763 56799999874
Q ss_pred ccccceeeecCC------CCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeee-eccCCCcceEEEEEeCCC-Ce
Q 028802 69 FKDCSDRFVGLS------PNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDR-KF 137 (203)
Q Consensus 69 ~~~~~~~~~~~~------~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~~ 137 (203)
.+.+..+.. . ......+ ++|+|+++++++. ++.|.+||+.+++.+.. +... . ...+.+.|++ ..
T Consensus 91 -~~~~~~i~~-~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~--~~~v~~~p~~~~~ 165 (361)
T 2oiz_A 91 -LTFEKEISL-PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-G--CWSVIPQPNRPRS 165 (361)
T ss_dssp -CCEEEEEEE-CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-T--EEEEEECTTSSSE
T ss_pred -CcEEEEEEc-CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-C--cceeEEcCCCCee
Confidence 355555542 2 1234556 8999999999874 57899999999988877 6543 2 3445667765 56
Q ss_pred EEEEeCCCcEEEEeCCC
Q 028802 138 LGSISHDSMLKLWDLDD 154 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~ 154 (203)
+++.+.||.+.+|++..
T Consensus 166 ~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 166 FMTICGDGGLLTINLGE 182 (361)
T ss_dssp EEEEETTSSEEEEEECT
T ss_pred EEEECCCCcEEEEEECC
Confidence 67777888888887754
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.37 E-value=8.7e-11 Score=85.39 Aligned_cols=152 Identities=7% Similarity=-0.038 Sum_probs=105.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+++++|+++++.. ++.|.+|+..+.............+..+++.++++++++...++.|.+|+.... ........ .
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~-~ 148 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK-TQTVLPFT-G 148 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC-SCEECCCC-S
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc-eeEeeccc-c
Confidence 46788888666655 889999998765433222223356889999999998777777889999976432 11111112 2
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
...+..+ ++++++++++...++.|.+|+............+. ..+..++++++|..+++...++.|.+|+..+..
T Consensus 149 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 149 LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 2356667 79999877777778899999987665543332322 368899999999777776678899999986643
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.36 E-value=1.6e-10 Score=88.58 Aligned_cols=155 Identities=12% Similarity=0.015 Sum_probs=108.3
Q ss_pred CcccccCCEEEEEc----------CCCeEEEEEcCCCeEEEeecCC-------cccEEEEEEeeCCCEEEEecC--CCeE
Q 028802 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (203)
Q Consensus 1 l~~sp~~~~l~~~~----------~d~~i~v~d~~~~~~~~~~~~~-------~~~i~~l~~~~~~~~l~~~~~--d~~i 61 (203)
+++||||++|+++. .++.|.+||..+.+.+..+... ......++|+|+|++|++++. ++.|
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v 150 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV 150 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeE
Confidence 57999999998875 3678999999988777666432 123457899999999998874 4789
Q ss_pred EEEEcCCcccccee-eec-------------------------------------------------CCC----------
Q 028802 62 LLYSWGYFKDCSDR-FVG-------------------------------------------------LSP---------- 81 (203)
Q Consensus 62 ~v~d~~~~~~~~~~-~~~-------------------------------------------------~~~---------- 81 (203)
.++| .+. +.+.. +.. .+.
T Consensus 151 ~viD-~t~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 228 (373)
T 2mad_H 151 GLVV-QGG-SSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV 228 (373)
T ss_pred EEEE-CCC-CEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEE
Confidence 9998 642 32222 100 000
Q ss_pred --------------------------------------CceeEE-EeeCCCEEEEEcC----------CCcEEEEEccCC
Q 028802 82 --------------------------------------NSVDAL-LKLDEDRVITGSE----------NGLISLVGILPN 112 (203)
Q Consensus 82 --------------------------------------~~v~~~-~~~~~~~l~~~~~----------dg~v~v~d~~~~ 112 (203)
.....+ ++|+++.++++.. .+.|.++|+.++
T Consensus 229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG 308 (373)
T ss_pred EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence 000013 4556666665543 347999999999
Q ss_pred ceeeeeccCCCcceEEEEEeCCCC-eEEEEe-CCCcEEEEeCCCcccCC
Q 028802 113 RIIQPIAEHSEYPIESLALSHDRK-FLGSIS-HDSMLKLWDLDDILKGS 159 (203)
Q Consensus 113 ~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~d~~i~iwd~~~~~~~~ 159 (203)
+.+..+... . ...+++|+|||+ .++++. .++.|.+||+.+++...
T Consensus 309 ~vv~~i~~g-~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 309 QTSSQISLG-H-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred EEEEEEECC-C-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 888888654 3 578999999999 677776 58999999999887553
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.35 E-value=3.5e-11 Score=90.24 Aligned_cols=150 Identities=11% Similarity=0.069 Sum_probs=108.5
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+|+|++..++..+.++.+++| .+.....+..+...+.+++|+|++++++++..++.|.+||... +........ +
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-~~~~~~~~~-~ 85 (333)
T 2dg1_A 11 LFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-KEIKRPFVS-H 85 (333)
T ss_dssp CCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEEC-S
T ss_pred eeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-CcEEEEeeC-C
Confidence 5688888888777778899999 3445556666667789999999999888888899999999864 333332324 5
Q ss_pred CCceeEE-EeeCCCEEEEEcCC----CcEEEEEccCCceeeeecc-CCCcceEEEEEeCCCCeEEEEeC------CCcEE
Q 028802 81 PNSVDAL-LKLDEDRVITGSEN----GLISLVGILPNRIIQPIAE-HSEYPIESLALSHDRKFLGSISH------DSMLK 148 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d----g~v~v~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~------d~~i~ 148 (203)
...+.++ ++|+++++++...+ +.|.+||..++.....+.. .....+..++++|+|+.+++... .+.|.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 5678888 89999988777666 6899999887765433321 11236899999999987776553 35677
Q ss_pred EEeCCCc
Q 028802 149 LWDLDDI 155 (203)
Q Consensus 149 iwd~~~~ 155 (203)
.|+..+.
T Consensus 166 ~~~~~~~ 172 (333)
T 2dg1_A 166 YVSPDFR 172 (333)
T ss_dssp EECTTSC
T ss_pred EEeCCCC
Confidence 7776543
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.35 E-value=1.6e-11 Score=101.93 Aligned_cols=151 Identities=12% Similarity=0.086 Sum_probs=100.3
Q ss_pred CcccccCCEEEEEcCC-----CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCe--------------E
Q 028802 1 MTFAADAMKLLGTSGD-----GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT--------------V 61 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~--------------i 61 (203)
++|||||++|+.+..+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.++. |
T Consensus 168 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp EEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEE
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEE
Confidence 3699999999887543 46999999998765431 11222357899999 98888776543 8
Q ss_pred EEEEcCCccccce-eeec-CCCCceeEE-EeeCCCEEEEEcCCC-----cEEEEEccCC--ceeeeeccCCCcceEEEEE
Q 028802 62 LLYSWGYFKDCSD-RFVG-LSPNSVDAL-LKLDEDRVITGSENG-----LISLVGILPN--RIIQPIAEHSEYPIESLAL 131 (203)
Q Consensus 62 ~v~d~~~~~~~~~-~~~~-~~~~~v~~~-~~~~~~~l~~~~~dg-----~v~v~d~~~~--~~~~~~~~~~~~~i~~~~~ 131 (203)
++|++.+....-. .+.. .+...+..+ |+|+|++|+..+.++ .|++||+.++ ++...+..+.. .+... +
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~-~ 323 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-AQWDF-V 323 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-SCEEE-E
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-ceEEE-E
Confidence 8899864322111 2222 012235666 899999998877543 7999999876 41344544433 34444 3
Q ss_pred eCCCCeEEEEeC----CCcEEEEeCCCc
Q 028802 132 SHDRKFLGSISH----DSMLKLWDLDDI 155 (203)
Q Consensus 132 ~~~~~~l~~~~~----d~~i~iwd~~~~ 155 (203)
+|+|..|+..+. .+.|.+|++.++
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 589998887765 345999998774
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.33 E-value=2.1e-10 Score=84.68 Aligned_cols=149 Identities=8% Similarity=0.014 Sum_probs=103.2
Q ss_pred CcccccCCEEEE----Ec-------------CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEE
Q 028802 1 MTFAADAMKLLG----TS-------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (203)
Q Consensus 1 l~~sp~~~~l~~----~~-------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v 63 (203)
++++|+|+++++ |+ ..+.|..++.. +.. ..+..+......++|+|+++.|++.+.++.|.+
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~ 197 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHR 197 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEE
Confidence 467899988886 33 13456666655 443 333444566789999999999877777899999
Q ss_pred EEcCCcccc---ceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEE-eCCCCeE
Q 028802 64 YSWGYFKDC---SDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLAL-SHDRKFL 138 (203)
Q Consensus 64 ~d~~~~~~~---~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l 138 (203)
|++...+.. ...+.. ....+..+ ++++|+++++. ++.|.+|+.. ++.+..+..+.. +.+++| .|+++.|
T Consensus 198 ~~~~~~g~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~--~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 198 YCLNARGETEYQGVHFTV-EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT--TSNLCFGGPEGRTL 271 (296)
T ss_dssp EEECSSSCEEEEEEEECC-SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC--CCEEEEESTTSCEE
T ss_pred EEECCCCcCcCCCeEeeC-CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC--ceeEEEECCCCCEE
Confidence 998632332 223322 34455667 89999876666 7889999986 777777776633 788999 5899988
Q ss_pred EEEeCCCcEEEEeCCCcccC
Q 028802 139 GSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~~~ 158 (203)
++++.+ .|..++..+...+
T Consensus 272 ~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 272 YMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp EEEETT-EEEEEECSCCBCC
T ss_pred EEEcCC-eEEEEEccccccc
Confidence 888765 4666666555443
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.32 E-value=1.4e-10 Score=95.54 Aligned_cols=148 Identities=9% Similarity=0.000 Sum_probs=101.7
Q ss_pred CcccccCCEEEEEcCCCe-------------EEEEEcCCCe----EEEeecCCcccEEEEEEeeCCCEEEEecCCC----
Q 028802 1 MTFAADAMKLLGTSGDGT-------------LSVCNLRKNT----VQTRSEFSEEELTSVVLMKNGRKVVCGSQSG---- 59 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~-------------i~v~d~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~---- 59 (203)
++|+|||+.|++++.+.. |++|++.++. ++.....+...+..+.|+|+|++|+.++.++
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 579999999999888765 9999998764 3334444556788999999999988777655
Q ss_pred eEEEEEcCCccccceeeecCCCCceeEEEeeCCCEEEEEcC----CCcEEEEEccCCce---eeeeccCCCcceEEEEEe
Q 028802 60 TVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSE----NGLISLVGILPNRI---IQPIAEHSEYPIESLALS 132 (203)
Q Consensus 60 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~----dg~v~v~d~~~~~~---~~~~~~~~~~~i~~~~~~ 132 (203)
.|++++.. ......+.. +...+...+.+++. ++..+. ++.|.+|++.++.. ...+..+....+..++|+
T Consensus 253 ~l~~~~~~--~~~~~~l~~-~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 253 DVYWKRPG--EKDFRLLVK-GVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEECTT--CSSCEEEEE-CSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred EEEEEcCC--CCceEEeec-CCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 56666543 234455555 55555555347777 555443 57899999987653 333333223357888888
Q ss_pred CCCCeEEEEeCCCcEEEEeCC
Q 028802 133 HDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 133 ~~~~~l~~~~~d~~i~iwd~~ 153 (203)
++..+++...|+..+||.+.
T Consensus 329 -~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 329 -GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp -TTEEEEEEEETTEEEEEEEE
T ss_pred -CCEEEEEEEECCEEEEEEEe
Confidence 66777888888888777554
No 196
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.32 E-value=3.5e-11 Score=92.18 Aligned_cols=128 Identities=10% Similarity=0.064 Sum_probs=96.4
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 80 (203)
|+| +++.|+++ .++.|++||+.+.........+..++.++.+.+. .+++++.+|.+.+||+... ... . .
T Consensus 93 l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~-~~~----~-~ 161 (388)
T 1xip_A 93 VCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTK-STK----Q-L 161 (388)
T ss_dssp EEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTC-CEE----E-E
T ss_pred EEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCC-ccc----c-c
Confidence 456 88999998 7899999999865444445555667888777654 3888899999999999742 322 1 3
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCce--eeee------c---cCCCcceEEEEEeCCCCeEEEEe
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI--IQPI------A---EHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~--~~~~------~---~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
...+.++ |+|+| ++.|..+|.+++|+...+.. ..++ . +| ...|.++.|.+++.++++-.
T Consensus 162 ~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 162 AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEEEE
T ss_pred cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCC-CeeEEEEEEecCCeEEEEEc
Confidence 4578899 99999 67899999999999887664 4455 2 24 34799999999999887643
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.25 E-value=2.8e-09 Score=78.27 Aligned_cols=149 Identities=8% Similarity=-0.027 Sum_probs=104.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccce-eeecC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD-RFVGL 79 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~ 79 (203)
|+++++|.++++...++.|..|+.........+......+..+++.+++.++++...++.|.+||.. +.... ....
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~--g~~~~~~~~~- 138 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD--GKIREYELPN- 138 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CCEEEEECSS-
T ss_pred EEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC--CCEEEecCCC-
Confidence 3577888888877778899999976322222222344578899999999888887778899999873 22221 1222
Q ss_pred CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeee-eccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
....+..+ +.+++.++++....+.|.+|+. +++.... +... ...+..++++++|+.+++...++.|.+|+. ++
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTP-ASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCC-CCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 33456777 7899988877777789999998 6665432 2222 226889999999987766666789999998 44
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.24 E-value=2.6e-09 Score=85.98 Aligned_cols=152 Identities=11% Similarity=0.073 Sum_probs=105.3
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcC--CCeEEEeecCCcccEEEEEEe----eCCCEEEEecC-CCeEEEEEcCCccccc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLM----KNGRKVVCGSQ-SGTVLLYSWGYFKDCS 73 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~l~~~----~~~~~l~~~~~-d~~i~v~d~~~~~~~~ 73 (203)
++|||||+++++++.++.|.+||+. +++.+..+... .....++|+ |+|+++++++. .+++.++|..+. +.+
T Consensus 202 v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~-~~~ 279 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL-EPK 279 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC-CEE
T ss_pred eEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC-cEE
Confidence 4689999999999999999999995 77777777653 346789999 69999887775 589999997542 332
Q ss_pred eeeecC---------------------C---------------------------------CCceeEE-EeeCCCEEEEE
Q 028802 74 DRFVGL---------------------S---------------------------------PNSVDAL-LKLDEDRVITG 98 (203)
Q Consensus 74 ~~~~~~---------------------~---------------------------------~~~v~~~-~~~~~~~l~~~ 98 (203)
..+... + ......+ |+|++++++++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 222110 0 0012245 78999988776
Q ss_pred c-CCCcEEEEEccCCceeeeecc-CCCc-ceEEEE-EeCCCCeE-EEEe-CCCcEEEEeCCC
Q 028802 99 S-ENGLISLVGILPNRIIQPIAE-HSEY-PIESLA-LSHDRKFL-GSIS-HDSMLKLWDLDD 154 (203)
Q Consensus 99 ~-~dg~v~v~d~~~~~~~~~~~~-~~~~-~i~~~~-~~~~~~~l-~~~~-~d~~i~iwd~~~ 154 (203)
+ .++.|.++|+.+++.+..+.. .... +-..+. ++|++..+ ++.. .++.|.++|..+
T Consensus 360 ~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 360 ANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred eCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 6 478899999999988766654 2110 101222 58875544 4443 468999999987
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.24 E-value=6.3e-10 Score=85.05 Aligned_cols=144 Identities=10% Similarity=-0.067 Sum_probs=104.9
Q ss_pred ccccCCEEEEEcC-----CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEec----------CCCeEEEEEcC
Q 028802 3 FAADAMKLLGTSG-----DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWG 67 (203)
Q Consensus 3 ~sp~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----------~d~~i~v~d~~ 67 (203)
..|+++.+++... ++.|.++|..+++.+..+.....+ . ++++|+++++++++ .++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 4689998888755 679999999999999888765555 4 99999999888775 35789999997
Q ss_pred CccccceeeecCCC-------CceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCe
Q 028802 68 YFKDCSDRFVGLSP-------NSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF 137 (203)
Q Consensus 68 ~~~~~~~~~~~~~~-------~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 137 (203)
+ ...+..+.. .. .....+ ++|+|+++++++. ++.|.++|+.+++.+.++... + + ...+....+.
T Consensus 118 t-~~v~~~I~v-~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g--~-~~~~P~g~~~ 191 (386)
T 3sjl_D 118 T-LLPTADIEL-PDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D--C-YHIFPTAPDT 191 (386)
T ss_dssp T-CCEEEEEEE-TTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S--E-EEEEEEETTE
T ss_pred C-CeEEEEEEC-CCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C--c-ceeecCCCce
Confidence 5 455555532 21 134456 8999999998874 688999999999999888654 2 2 1223333455
Q ss_pred EEEEeCCCcEEEEeCCC
Q 028802 138 LGSISHDSMLKLWDLDD 154 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~ 154 (203)
+++.+.||.+.+.++.+
T Consensus 192 ~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEETTSCEEEEECCS
T ss_pred eEEECCCCCEEEEECCC
Confidence 56666677777777654
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.24 E-value=5.5e-10 Score=82.83 Aligned_cols=150 Identities=8% Similarity=0.072 Sum_probs=102.8
Q ss_pred CcccccCCEEEEEcCC---------------CeEEEEEcCCCeEEEeecCCcccEEEEEEe----eCCCEEEEe-cCCCe
Q 028802 1 MTFAADAMKLLGTSGD---------------GTLSVCNLRKNTVQTRSEFSEEELTSVVLM----KNGRKVVCG-SQSGT 60 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d---------------~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~----~~~~~l~~~-~~d~~ 60 (203)
|+++|+|+++++...+ +.|..|+.. ++..... .+......++|+ |+++.|+++ ..++.
T Consensus 122 i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~ 199 (314)
T 1pjx_A 122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKK 199 (314)
T ss_dssp EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred EEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCe
Confidence 3577888877776554 567777765 5443322 223446789999 998765554 56789
Q ss_pred EEEEEcCCccc-----cceeeecCCC-CceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeC
Q 028802 61 VLLYSWGYFKD-----CSDRFVGLSP-NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH 133 (203)
Q Consensus 61 i~v~d~~~~~~-----~~~~~~~~~~-~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~ 133 (203)
|.+|++...+. ....+.. +. ..+..+ ++++|.++++...++.|.+||..+++.+..+..+.. .+.+++|+|
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~i~~~~ 277 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE-KPSNLHFKP 277 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS-CEEEEEECT
T ss_pred EEEEECCCCCccccceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC-CceeEEECC
Confidence 99999752122 1122222 22 446667 799998888877788999999887776666665533 689999999
Q ss_pred CCCeEEEEe-CCCcEEEEeCCC
Q 028802 134 DRKFLGSIS-HDSMLKLWDLDD 154 (203)
Q Consensus 134 ~~~~l~~~~-~d~~i~iwd~~~ 154 (203)
++++|++++ .++.|..|++..
T Consensus 278 dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 278 QTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEeCCCCeEEEEeCCC
Confidence 999665544 568899999864
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.23 E-value=9.8e-10 Score=82.60 Aligned_cols=144 Identities=7% Similarity=0.005 Sum_probs=102.9
Q ss_pred CCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC-----
Q 028802 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP----- 81 (203)
Q Consensus 7 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~----- 81 (203)
++.+++...++.|.+||..+++.+..+.. ......+++++++..+++...++.|.+||..+ ......+.. ..
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-~~~~~~i~~-g~~~~~~ 130 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-YEITGYIEC-PDMDMES 130 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTT-TEEEEEEEC-TTCCTTT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCC-CeEEEEEEc-CCccccC
Confidence 34445556679999999999988887753 45688999999985444443789999999875 344444443 22
Q ss_pred CceeEE-EeeCCCEEEEEc--CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC----------CcEE
Q 028802 82 NSVDAL-LKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD----------SMLK 148 (203)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~--~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~ 148 (203)
.....+ + ++..++++. .++.|.++|+.+++.+..+.... ....++++|+|++++++..+ +.|.
T Consensus 131 ~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 131 GSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp CBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred CCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 134455 4 445555554 47899999999998887776542 45788999999877766554 7899
Q ss_pred EEeCCCccc
Q 028802 149 LWDLDDILK 157 (203)
Q Consensus 149 iwd~~~~~~ 157 (203)
+||..+...
T Consensus 207 ~id~~t~~v 215 (328)
T 3dsm_A 207 RIDAETFTV 215 (328)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCeE
Confidence 999987654
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.23 E-value=1.3e-09 Score=90.45 Aligned_cols=149 Identities=15% Similarity=0.091 Sum_probs=101.0
Q ss_pred CcccccCCEEEEEcCCCe--------------EEEEEcCCCe----EEEeecCCcccEEEEEEeeCCCEEEEecCC----
Q 028802 1 MTFAADAMKLLGTSGDGT--------------LSVCNLRKNT----VQTRSEFSEEELTSVVLMKNGRKVVCGSQS---- 58 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~--------------i~v~d~~~~~----~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d---- 58 (203)
++|+|| +.|++++.++. |++|++.++. .+.....+...+..+.|+|||++|+..+.+
T Consensus 214 ~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 292 (741)
T 1yr2_A 214 LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDP 292 (741)
T ss_dssp CEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCS
T ss_pred EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCC
Confidence 479999 99988876543 8999987754 333333333458899999999998877654
Q ss_pred -CeEEEEEcCCcccc-ceeeecCCCCceeEEEeeCCCEEEEEcCC----CcEEEEEccCC--ceeeeeccCCCcceEEEE
Q 028802 59 -GTVLLYSWGYFKDC-SDRFVGLSPNSVDALLKLDEDRVITGSEN----GLISLVGILPN--RIIQPIAEHSEYPIESLA 130 (203)
Q Consensus 59 -~~i~v~d~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~l~~~~~d----g~v~v~d~~~~--~~~~~~~~~~~~~i~~~~ 130 (203)
..|++||+...... ...+.. +.......++|+|..|+..+.+ +.|.+|++.++ .....+..+ ...+..+.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~l~~~~ 370 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIP-DLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES-KDNLESVG 370 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC-SSEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC-CCeEEEEE
Confidence 38999998643113 455655 5555555557999998887763 45999998874 333334443 33566777
Q ss_pred EeCCCCeEEEEeCCCcEEEEeCC
Q 028802 131 LSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 131 ~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
|+ ++..+++...++..+||.+.
T Consensus 371 ~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 371 IA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EE-BTEEEEEEEETTEEEEEEEE
T ss_pred EE-CCEEEEEEEECCEEEEEEEe
Confidence 77 55667777788877766543
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=4.2e-09 Score=77.32 Aligned_cols=147 Identities=5% Similarity=-0.060 Sum_probs=104.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEE-eecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccccee-eec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR-FVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~ 78 (203)
|+++|+++++++...++.|.+|+. ++.... ........+..+++.+++..+++....+.|.+||. . +..... +..
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~ 180 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S-GDITEFKIPT 180 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSS
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-CcEEEeeCCC
Confidence 356788888887777889999998 554432 23334456889999999988887777789999997 3 333221 222
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeee-eccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
....+..+ +++++.++++....+.|.+|+. ++..... +..+ ...+.+++++++|+.+++...++.|.+||..
T Consensus 181 -~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 181 -PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTP-NARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp -TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred -CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCC-CCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 33456677 7889987777667889999998 6654332 2222 2368899999999866666577899999984
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.20 E-value=1.5e-09 Score=84.05 Aligned_cols=150 Identities=14% Similarity=0.034 Sum_probs=101.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCC--eEEEEEcCCccccceee--
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFKDCSDRF-- 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~-- 76 (203)
|+|+|+++++++...++.|++||..++........... .. ++|+++++.|+++..++ .|.+|+.... .....+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~-~~~~~~g~ 212 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG-WAPTRIGQ 212 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT-TCEEEEEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCC-ceeEEeee
Confidence 57889998777777789999999988876555444332 33 89999999998888765 7888887532 222233
Q ss_pred --ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeee----eccCCCcceE-EEEEeCC-CCeEEEEeCCCcE
Q 028802 77 --VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP----IAEHSEYPIE-SLALSHD-RKFLGSISHDSML 147 (203)
Q Consensus 77 --~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~----~~~~~~~~i~-~~~~~~~-~~~l~~~~~d~~i 147 (203)
.. ....+..+ ++|++..|+++..++.|+.||+.++..... .......... .++|+|+ +..+++....+.|
T Consensus 213 ~~~~-~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 213 LGST-FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp CCTT-SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred ccch-hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 21 22345566 799555666677788999999887654322 2222121113 8999996 5555555578899
Q ss_pred EEEeCCC
Q 028802 148 KLWDLDD 154 (203)
Q Consensus 148 ~iwd~~~ 154 (203)
+.|+...
T Consensus 292 ~~~~~~g 298 (409)
T 3hrp_A 292 YKITPDG 298 (409)
T ss_dssp EEECTTC
T ss_pred EEEecCC
Confidence 9999765
No 205
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.18 E-value=4.5e-12 Score=96.97 Aligned_cols=144 Identities=11% Similarity=0.097 Sum_probs=81.2
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCC-ce
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPN-SV 84 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-~v 84 (203)
++..|++++.|+.|+.||..+|+.+..+.. ..+.+..+..++..+++++.++.|+.||..+ ++.+..+.. +.. .+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t-G~~~w~~~~-~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKN-NEGLTKLPF-TIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSC-CHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCC-Cceeeeeec-cCcccc
Confidence 577899999999999999999999888876 4455555566777888888999999999865 343333322 211 11
Q ss_pred eEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 85 DAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 85 ~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
.+. +-..+..+++++.++.|+.||..+|+.+..+..+. ...++|++..|++++.++.|+.||.+++...
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 111 11134567788889999999999999988776552 1345678888999999999999999988654
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.16 E-value=7.8e-10 Score=91.17 Aligned_cols=151 Identities=9% Similarity=0.082 Sum_probs=97.3
Q ss_pred cccccCCEEEEEc-----CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCC-------------eEEE
Q 028802 2 TFAADAMKLLGTS-----GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG-------------TVLL 63 (203)
Q Consensus 2 ~~sp~~~~l~~~~-----~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~-------------~i~v 63 (203)
+|||||++||.+. ...+|++||+.+++.+... .+......++|+ |++.|+.++.+. .|++
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEE
Confidence 6999999988542 2357999999998764421 111113567999 999998887763 4999
Q ss_pred EEcCCccccceeeecCCCC----ceeEE-EeeCCCEEEEEcC----CCcEEEEEccCCc-eeeeeccCCCcceEEEEEeC
Q 028802 64 YSWGYFKDCSDRFVGLSPN----SVDAL-LKLDEDRVITGSE----NGLISLVGILPNR-IIQPIAEHSEYPIESLALSH 133 (203)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~~----~v~~~-~~~~~~~l~~~~~----dg~v~v~d~~~~~-~~~~~~~~~~~~i~~~~~~~ 133 (203)
|++.+....-..+.. ... ....+ ++|+|++|+.... ...|+++|+.++. ....+..+.. ..... |++
T Consensus 213 ~~lgt~~~~~~~v~~-~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-~~~~~-~~~ 289 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFG-AIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-ADVSL-VDN 289 (693)
T ss_dssp EETTSCGGGCEEEES-CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-SCEEE-EEE
T ss_pred EECCCCcccceEEEe-cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-ceEEE-Eec
Confidence 998754322222322 222 24556 8999998875443 3479999987663 3444555533 34444 677
Q ss_pred CCCeEEEEe-C---CCcEEEEeCCCccc
Q 028802 134 DRKFLGSIS-H---DSMLKLWDLDDILK 157 (203)
Q Consensus 134 ~~~~l~~~~-~---d~~i~iwd~~~~~~ 157 (203)
+|..|+..+ . .+.|.++++.++..
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 776665444 3 36799999987643
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.14 E-value=1.1e-08 Score=78.27 Aligned_cols=142 Identities=8% Similarity=-0.131 Sum_probs=102.2
Q ss_pred cccCCEEEEEcC--CC---eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEec----------CCCeEEEEEcCC
Q 028802 4 AADAMKLLGTSG--DG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGY 68 (203)
Q Consensus 4 sp~~~~l~~~~~--d~---~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----------~d~~i~v~d~~~ 68 (203)
.|+++++++... .. +|.+||..+++.+..+.....+ .++++||+++++++. .++.|.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 477887777653 23 8899999999988888764444 899999999999886 367899999864
Q ss_pred ccccceeeecCC-------CCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeee-eccCCCcceEEEEEeCCC-C
Q 028802 69 FKDCSDRFVGLS-------PNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDR-K 136 (203)
Q Consensus 69 ~~~~~~~~~~~~-------~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~ 136 (203)
...+..+.. . ......+ ++|+|+++++++. ++.|.++| .+++.+.. +... . ++.+.|++ +
T Consensus 107 -~~~~~~i~~-~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~----~~~~~~~~~~ 178 (373)
T 2mad_H 107 -FLPIADIEL-PDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T----CYHIHPGAPS 178 (373)
T ss_pred -CcEEEEEEC-CCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c----eEEEEeCCCc
Confidence 344444432 1 1223456 8999999999874 47899999 99988877 6543 2 24455655 3
Q ss_pred eEEEEeCCCcEEEEeCCCcc
Q 028802 137 FLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~ 156 (203)
.+++.+.||.+.+++. ++.
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCc
Confidence 4566668889999988 554
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.13 E-value=3.5e-09 Score=78.64 Aligned_cols=145 Identities=13% Similarity=0.019 Sum_probs=99.6
Q ss_pred cccccCC-EEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec--
Q 028802 2 TFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-- 78 (203)
Q Consensus 2 ~~sp~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-- 78 (203)
+|+|+++ ++++...++.|..|+. ++.. ..+..+...+..++++++|+++++...++.|.+|+.. +.. ..+..
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~-~~~~~~~ 125 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQA-HLLVGRY 125 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-EEEECEE
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCE-EEEEecc
Confidence 6899998 5667777899999998 4443 3444455678899999999977776666889999874 232 22211
Q ss_pred --CCCCceeEE-EeeCCCEEEE----EcC-------------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeE
Q 028802 79 --LSPNSVDAL-LKLDEDRVIT----GSE-------------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (203)
Q Consensus 79 --~~~~~v~~~-~~~~~~~l~~----~~~-------------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 138 (203)
.....+..+ ++|+|.++++ +.. .+.|+.|+..+++..... .. . ....++|+|+++.|
T Consensus 126 ~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~-~-~p~gl~~spdg~~l 202 (305)
T 3dr2_A 126 AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL-D-HPNGLAFSPDEQTL 202 (305)
T ss_dssp TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE-S-SEEEEEECTTSSEE
T ss_pred CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC-C-CCcceEEcCCCCEE
Confidence 011234566 8999998876 332 246777887666654433 22 2 56789999999988
Q ss_pred EEEeCC------CcEEEEeCCC
Q 028802 139 GSISHD------SMLKLWDLDD 154 (203)
Q Consensus 139 ~~~~~d------~~i~iwd~~~ 154 (203)
+.+... +.|.+|++..
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp EEEECCC---CCCEEEEEEEET
T ss_pred EEEecCCcCCCCCEEEEEEecC
Confidence 777654 6899999864
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=2.3e-08 Score=73.31 Aligned_cols=147 Identities=8% Similarity=0.027 Sum_probs=103.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEE-eecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~- 78 (203)
|+++++|+.+++...++.|.+|+.. ++... .+......+..+++.+++.++++...++.|.+||.. +.. ..+..
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~-~~~~~~ 100 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGF-TEYPLP 100 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-EEEECS
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCe-EEecCC
Confidence 3567888877777778999999987 54433 223334678899999999888877778889999875 232 22221
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceee-eeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQ-PIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
.....+..+ +.+++.++++....+.|..++.. ++... .+... ...+..+++.++++.+++...++.|..|+..
T Consensus 101 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 175 (300)
T 2qc5_A 101 QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK-GSYPAFITLGSDNALWFTENQNNSIGRITNT 175 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSST-TCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCC-CCCceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 023456777 78899888877778889999987 55442 22222 2368899999999866666567889999873
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.12 E-value=3.1e-09 Score=78.66 Aligned_cols=138 Identities=9% Similarity=0.017 Sum_probs=91.0
Q ss_pred CcccccCCEEEEEcC-----------CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEE-EecCCCeEEEEEcC-
Q 028802 1 MTFAADAMKLLGTSG-----------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWG- 67 (203)
Q Consensus 1 l~~sp~~~~l~~~~~-----------d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~- 67 (203)
++++|+|+++++... .+.|+.++.. +.... +.........++|+|+++.|+ +.+..+.|.+|++.
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~ 180 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDL 180 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECT
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccC
Confidence 357888986665422 2344444433 33322 222334567899999998765 45557899999974
Q ss_pred Ccccc-----ceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEe-CCCCeEEE
Q 028802 68 YFKDC-----SDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALS-HDRKFLGS 140 (203)
Q Consensus 68 ~~~~~-----~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~ 140 (203)
..+.. ...+.. ....+..+ ++++|++.++....+.|.+||..+++.+..+..+.. .+++++|. |+++.|+.
T Consensus 181 ~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~-~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 181 QTGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD-KTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp TTCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS-BEEEEEEESGGGCEEEE
T ss_pred CCCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC-CceEEEEeCCCCCEEEE
Confidence 22221 112222 23456677 789998877777778899999988998888877643 78999998 88887765
Q ss_pred Ee
Q 028802 141 IS 142 (203)
Q Consensus 141 ~~ 142 (203)
++
T Consensus 259 t~ 260 (297)
T 3g4e_A 259 TC 260 (297)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.11 E-value=2.9e-08 Score=72.78 Aligned_cols=147 Identities=6% Similarity=-0.034 Sum_probs=102.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEE-EeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccce-eeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD-RFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~-~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~ 78 (203)
|+++++++++++...++.|.+|+.. ++.. ..+......+..+++.++++++++...++.|..|+.. +.... .+..
T Consensus 67 i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~ 143 (300)
T 2qc5_A 67 LIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIYEYDLPN 143 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEEEEECSS
T ss_pred EEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEEEccCCC
Confidence 3567888877777767889999987 5443 2223234678899999999888877778889999875 23221 1222
Q ss_pred CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeee-eccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
....+..+ +.++++++++....+.|.+|+. +++.... .... ...+..++++++|+.+++....+.|.+|+..
T Consensus 144 -~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 144 -KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTN-AAAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp -TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred -CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCC-CCCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 23456777 7899997766666788999998 5554432 2222 2268899999999776666667789999973
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.11 E-value=7.2e-09 Score=85.46 Aligned_cols=151 Identities=7% Similarity=0.035 Sum_probs=102.8
Q ss_pred CcccccCCEEEEEcCCC-------------eEEEEEcCCCe----EEEeecC-CcccEEEEEEeeCCCEEEEecC----C
Q 028802 1 MTFAADAMKLLGTSGDG-------------TLSVCNLRKNT----VQTRSEF-SEEELTSVVLMKNGRKVVCGSQ----S 58 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~-------------~i~v~d~~~~~----~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~----d 58 (203)
++|+ |++.|+.++.+. .|++|++.++. ++..... +...+.++.|+|||++|+.... .
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 5799 999998887764 49999987753 3333333 4455788999999998865432 3
Q ss_pred CeEEEEEcCCccccceeeecCCCCceeEEEeeCCCEEEEEcC----CCcEEEEEccCCce--eeeeccCCCcceEEEEEe
Q 028802 59 GTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSE----NGLISLVGILPNRI--IQPIAEHSEYPIESLALS 132 (203)
Q Consensus 59 ~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~----dg~v~v~d~~~~~~--~~~~~~~~~~~i~~~~~~ 132 (203)
+.|+++|+.........+.. +.......+++++..|+..+. .+.|.++++.++.. ...+..+.. .+. .|+
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~-~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~--~~s 334 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG-DLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ-QVL--TVH 334 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCE--EEE
T ss_pred cEEEEEECCCCCCceEEEeC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC-CEE--EEE
Confidence 58999998754335566666 555555556777776665543 25799999887654 234545544 343 899
Q ss_pred CCCCeEEEEeC-CC--cEEEEeCCCcc
Q 028802 133 HDRKFLGSISH-DS--MLKLWDLDDIL 156 (203)
Q Consensus 133 ~~~~~l~~~~~-d~--~i~iwd~~~~~ 156 (203)
+++++|+.... ++ .|++|++.+..
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCe
Confidence 99998877664 43 68999987553
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.10 E-value=9.2e-09 Score=79.70 Aligned_cols=151 Identities=11% Similarity=0.014 Sum_probs=100.6
Q ss_pred CcccccCCEEEEEcCCC--eEEEEEcCCCeEEEee----cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccce
Q 028802 1 MTFAADAMKLLGTSGDG--TLSVCNLRKNTVQTRS----EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~--~i~v~d~~~~~~~~~~----~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 74 (203)
++|+|+++.|+++..++ .|.+++...+.....+ ......+.+++++|++..|+++..++.|+.||.... . ..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~-~-~~ 253 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ-E-VT 253 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC-C-EE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC-C-EE
Confidence 57899999988887765 7999998765433333 224456788999995555655777889999998643 2 22
Q ss_pred ee-----ecCCCCce-e-EE-EeeC-CCEEEEEcCCCcEEEEEccCCceeeeeccCC--------------CcceEEEEE
Q 028802 75 RF-----VGLSPNSV-D-AL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHS--------------EYPIESLAL 131 (203)
Q Consensus 75 ~~-----~~~~~~~v-~-~~-~~~~-~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~--------------~~~i~~~~~ 131 (203)
.+ .+ ..... . .+ |+|+ +.++++-...+.|+.|+.... +..+.++. -.....+++
T Consensus 254 ~~~~~~~~g-~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~ 330 (409)
T 3hrp_A 254 LIKQLELSG-SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTV 330 (409)
T ss_dssp EEEECCCCS-CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred EEecccccC-CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence 22 11 11111 2 67 8995 555555566788999987533 22332221 114788999
Q ss_pred eCCCCeEEEEe-CCCcEEEEeCCCcc
Q 028802 132 SHDRKFLGSIS-HDSMLKLWDLDDIL 156 (203)
Q Consensus 132 ~~~~~~l~~~~-~d~~i~iwd~~~~~ 156 (203)
+|+|+++++-. .++.|+.|++.++.
T Consensus 331 d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 331 DEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp CTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred eCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 99999777777 78999999976554
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.08 E-value=6.4e-10 Score=84.83 Aligned_cols=158 Identities=9% Similarity=-0.071 Sum_probs=108.6
Q ss_pred CcccccCCEEEEEc----------CCCeEEEEEcCCCeEEEeecCC-------cccEEEEEEeeCCCEEEEecC--CCeE
Q 028802 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (203)
Q Consensus 1 l~~sp~~~~l~~~~----------~d~~i~v~d~~~~~~~~~~~~~-------~~~i~~l~~~~~~~~l~~~~~--d~~i 61 (203)
++++||+++++++. .++.|.+||+.+++.+..+..+ ......++++|||++++++.. ...+
T Consensus 70 i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v 149 (368)
T 1mda_H 70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAA 149 (368)
T ss_dssp EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEE
T ss_pred eEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeE
Confidence 47899999988875 3688999999999988887533 123457899999999888764 3567
Q ss_pred EE--EEcCC------c----------------------------------cccc--------------------------
Q 028802 62 LL--YSWGY------F----------------------------------KDCS-------------------------- 73 (203)
Q Consensus 62 ~v--~d~~~------~----------------------------------~~~~-------------------------- 73 (203)
.+ +|+.+ . +...
T Consensus 150 ~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs 229 (368)
T 1mda_H 150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV 229 (368)
T ss_dssp EEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB
T ss_pred EEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc
Confidence 77 76631 0 0000
Q ss_pred ----eeeecC-CC---------------------CceeEE-EeeCCCEEEEEcC-C--------CcEEEEEccCCceeee
Q 028802 74 ----DRFVGL-SP---------------------NSVDAL-LKLDEDRVITGSE-N--------GLISLVGILPNRIIQP 117 (203)
Q Consensus 74 ----~~~~~~-~~---------------------~~v~~~-~~~~~~~l~~~~~-d--------g~v~v~d~~~~~~~~~ 117 (203)
..+... .. .....+ ++|+++.++.+.. . ..+.++|+.+++.+..
T Consensus 230 ~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~ 309 (368)
T 1mda_H 230 ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309 (368)
T ss_dssp SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC
T ss_pred CCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE
Confidence 000000 00 000114 7888888887643 2 3566999999999988
Q ss_pred eccCCCcceEEEEEeCCCCe-EEEEe-CCCcEEEEeCCCcccCCC
Q 028802 118 IAEHSEYPIESLALSHDRKF-LGSIS-HDSMLKLWDLDDILKGSG 160 (203)
Q Consensus 118 ~~~~~~~~i~~~~~~~~~~~-l~~~~-~d~~i~iwd~~~~~~~~~ 160 (203)
+... . ....++|+|||++ +++.. .++.|.++|+.+.+....
T Consensus 310 i~vg-~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 310 ISNG-H-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp CEEE-E-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred EECC-C-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEE
Confidence 8766 3 5789999999985 55666 589999999999875543
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=1.3e-08 Score=78.92 Aligned_cols=157 Identities=13% Similarity=0.130 Sum_probs=100.9
Q ss_pred CcccccCCEEEEEcC--CCeEEEEEcCCCeEEEeecCCcc-------cEEEEEEeeCCCEEEE-----------------
Q 028802 1 MTFAADAMKLLGTSG--DGTLSVCNLRKNTVQTRSEFSEE-------ELTSVVLMKNGRKVVC----------------- 54 (203)
Q Consensus 1 l~~sp~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~-------~i~~l~~~~~~~~l~~----------------- 54 (203)
++|+|||++|+++.. ++.|.++|+.+++.+..+..... .-..+.++++|+++++
T Consensus 182 ~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v 261 (426)
T 3c75_H 182 NALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHT 261 (426)
T ss_dssp SEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSC
T ss_pred EEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeecc
Confidence 578999999988764 57899999999988777754211 0111334444443333
Q ss_pred --------------------ecCCCeEEEEEcCCccc-cceeeec---------CCCCceeEE-EeeCCCEEEEEcC---
Q 028802 55 --------------------GSQSGTVLLYSWGYFKD-CSDRFVG---------LSPNSVDAL-LKLDEDRVITGSE--- 100 (203)
Q Consensus 55 --------------------~~~d~~i~v~d~~~~~~-~~~~~~~---------~~~~~v~~~-~~~~~~~l~~~~~--- 100 (203)
.+..+.+.+.|+..... .+..+.. ........+ ++|+++.+++...
T Consensus 262 ~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~ 341 (426)
T 3c75_H 262 EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRD 341 (426)
T ss_dssp TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECC
T ss_pred CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccc
Confidence 23334445555431110 0011100 001111224 7899888777643
Q ss_pred -------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC-eEEEEe-CCCcEEEEeCCCcccCC
Q 028802 101 -------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSIS-HDSMLKLWDLDDILKGS 159 (203)
Q Consensus 101 -------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~d~~i~iwd~~~~~~~~ 159 (203)
.+.|.++|+.+.+.+..+... . ....+.|+|||+ ++++.. .++.|.++|+.+.+...
T Consensus 342 ~gthk~~s~~VsVID~~T~kvv~~I~vg-~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 342 EWKHKAASRFVVVLNAETGERINKIELG-H-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp TTCTTSCEEEEEEEETTTCCEEEEEEEE-E-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred cccccCCCCEEEEEECCCCeEEEEEECC-C-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 347999999999999888765 2 478999999999 888877 58999999999887553
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.08 E-value=3.9e-08 Score=72.75 Aligned_cols=152 Identities=9% Similarity=0.046 Sum_probs=97.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecC----CcccEEEEEEeeCCCEEEEecCC---------CeEEEEEcC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF----SEEELTSVVLMKNGRKVVCGSQS---------GTVLLYSWG 67 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~i~~l~~~~~~~~l~~~~~d---------~~i~v~d~~ 67 (203)
++++|+|+++++. ++.|.+||..+++....... ....+..++++|+|+++++.... ....+|.+.
T Consensus 59 i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 59 VALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 4688999955554 46899999988765432221 23457899999999976654221 233455544
Q ss_pred CccccceeeecCCCCceeEE-EeeCCCEEEEE-cCCCcEEEEEc--cCCce-----eeeeccCCCcceEEEEEeCCCCeE
Q 028802 68 YFKDCSDRFVGLSPNSVDAL-LKLDEDRVITG-SENGLISLVGI--LPNRI-----IQPIAEHSEYPIESLALSHDRKFL 138 (203)
Q Consensus 68 ~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~dg~v~v~d~--~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l 138 (203)
..+... .+.. .......+ |+|+++.++.+ +..+.|.+|++ .++.. +..+..+.. .+..++++++|++.
T Consensus 137 ~~g~~~-~~~~-~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 137 PDHHVK-KYFD-QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-IPDGMCIDAEGKLW 213 (297)
T ss_dssp TTSCEE-EEEE-EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-EEEEEEEBTTSCEE
T ss_pred CCCCEE-EEee-ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-CCCeeEECCCCCEE
Confidence 323322 2322 33445667 89999877554 55788999987 44543 222222212 57889999999877
Q ss_pred EEEeCCCcEEEEeCCCccc
Q 028802 139 GSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~~ 157 (203)
++....+.|.+||..++..
T Consensus 214 va~~~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 214 VACYNGGRVIRLDPVTGKR 232 (297)
T ss_dssp EEEETTTEEEEECTTTCCE
T ss_pred EEEcCCCEEEEEcCCCceE
Confidence 7777788899999986543
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.02 E-value=5e-08 Score=72.18 Aligned_cols=150 Identities=10% Similarity=0.082 Sum_probs=97.7
Q ss_pred Cccccc-CCEEEEEcCCCeEEEEEcCCCeEEEe-ecC----CcccEEEEEEeeCCCEEEEecCC---------------C
Q 028802 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTR-SEF----SEEELTSVVLMKNGRKVVCGSQS---------------G 59 (203)
Q Consensus 1 l~~sp~-~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~----~~~~i~~l~~~~~~~~l~~~~~d---------------~ 59 (203)
++++++ ++++++.. .+.|.+|+.. ++.... ... ....+.+++++++++++++...+ +
T Consensus 76 i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 76 CQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp EEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred EEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCC
Confidence 357788 66555544 4579999988 665433 221 12357899999999888776654 4
Q ss_pred eEEEEEcCCccccceeeecCCCCceeEE-Ee----eCCCEEEEE-cCCCcEEEEEcc-CCc-----eeeeeccCCCcceE
Q 028802 60 TVLLYSWGYFKDCSDRFVGLSPNSVDAL-LK----LDEDRVITG-SENGLISLVGIL-PNR-----IIQPIAEHSEYPIE 127 (203)
Q Consensus 60 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~----~~~~~l~~~-~~dg~v~v~d~~-~~~-----~~~~~~~~~~~~i~ 127 (203)
.|..|+.. +... .+.. .......+ ++ |+++.++.+ ..++.|.+|++. ++. ....+..+....+.
T Consensus 154 ~l~~~~~~--g~~~-~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 154 SIYCFTTD--GQMI-QVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGAD 229 (314)
T ss_dssp EEEEECTT--SCEE-EEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred eEEEECCC--CCEE-Eecc-CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence 66666653 3332 2222 23345666 78 998766555 567899999986 443 22233333102578
Q ss_pred EEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 128 SLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 128 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
.++++++|+.+++...++.|.+||..++.
T Consensus 230 ~i~~d~~G~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 230 GMDFDEDNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred ceEECCCCCEEEEEcCCCEEEEEcCCCCc
Confidence 89999999888887788899999987543
No 218
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.99 E-value=7.6e-08 Score=69.95 Aligned_cols=153 Identities=9% Similarity=0.053 Sum_probs=103.9
Q ss_pred CcccccCCEEEEEcC--CCeEEEEEcCCCeEEEeecCCcc-cEEEEEEeeCCCEEEEec-CCCeEEEEEcCCccccceee
Q 028802 1 MTFAADAMKLLGTSG--DGTLSVCNLRKNTVQTRSEFSEE-ELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~-~i~~l~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~ 76 (203)
|+|+|++.++++.+. ++.|.++|+.+++.+..+..... ....+++ ++..|+.+. .++.+.++|..+ .+.+..+
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~~v~viD~~t-~~v~~~i 102 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKNIGFIYDRRT-LSNIKNF 102 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCSEEEEEETTT-TEEEEEE
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecCCEEEEEECCC-CcEEEEE
Confidence 468888654444432 58999999999998887753221 2234444 455665554 578999999875 4566666
Q ss_pred ecCC-CCceeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCC----cceEEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 77 VGLS-PNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE----YPIESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 77 ~~~~-~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
.. . ... +. ++++|+.++.+..++.|.++|..+.+.+..+..... ..+..+.|. +|...+....++.|.+.|
T Consensus 103 ~~-g~~~g-~g-lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 103 TH-QMKDG-WG-LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARIS 178 (266)
T ss_dssp EC-CSSSC-CE-EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred EC-CCCCe-EE-EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence 54 3 211 22 577888888888889999999999888877754311 135678888 675444544678999999
Q ss_pred CCCcccCCC
Q 028802 152 LDDILKGSG 160 (203)
Q Consensus 152 ~~~~~~~~~ 160 (203)
..++.....
T Consensus 179 ~~tg~V~~~ 187 (266)
T 2iwa_A 179 AKDGTLLGW 187 (266)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 999875433
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.96 E-value=2e-07 Score=69.85 Aligned_cols=146 Identities=7% Similarity=0.073 Sum_probs=94.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecC----CcccEEEEEEeeCCCEEEEecC------CCeEEEEEcCCcc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF----SEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYFK 70 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~i~~l~~~~~~~~l~~~~~------d~~i~v~d~~~~~ 70 (203)
++|+|+|+++++. . ..|.+||..+++....... ....+..++++|+|+++++... .+.|..++ . +
T Consensus 95 i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~--g 169 (326)
T 2ghs_A 95 LAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K--G 169 (326)
T ss_dssp EEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T--T
T ss_pred EEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C--C
Confidence 3578888877765 3 4599999988765432221 1246889999999997665432 24555555 2 3
Q ss_pred ccceeeecCCCCceeEE-EeeCCCEEEEE-cCCCcEEEEEcc--CC-ce-----eeeeccCCCcceEEEEEeCCCCeEEE
Q 028802 71 DCSDRFVGLSPNSVDAL-LKLDEDRVITG-SENGLISLVGIL--PN-RI-----IQPIAEHSEYPIESLALSHDRKFLGS 140 (203)
Q Consensus 71 ~~~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~dg~v~v~d~~--~~-~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~ 140 (203)
.. ..+.. .......+ |+|+++.++.+ ...+.|.+|++. ++ .. +..+..... .+..++++++|.++++
T Consensus 170 ~~-~~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~-~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 170 KV-TKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG-GMDGSVCDAEGHIWNA 246 (326)
T ss_dssp EE-EEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS-EEEEEEECTTSCEEEE
T ss_pred cE-EEeeC-CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC-CCCeeEECCCCCEEEE
Confidence 32 22322 33345567 89999877655 456889999986 55 31 222222222 5678999999987777
Q ss_pred EeCCCcEEEEeCCC
Q 028802 141 ISHDSMLKLWDLDD 154 (203)
Q Consensus 141 ~~~d~~i~iwd~~~ 154 (203)
...++.|.+|+...
T Consensus 247 ~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 247 RWGEGAVDRYDTDG 260 (326)
T ss_dssp EETTTEEEEECTTC
T ss_pred EeCCCEEEEECCCC
Confidence 66678899999843
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.95 E-value=4.7e-08 Score=75.86 Aligned_cols=113 Identities=9% Similarity=-0.090 Sum_probs=85.5
Q ss_pred ccCCEEEEEcC-C----CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEec----------CCCeEEEEEcCCc
Q 028802 5 ADAMKLLGTSG-D----GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGYF 69 (203)
Q Consensus 5 p~~~~l~~~~~-d----~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----------~d~~i~v~d~~~~ 69 (203)
|+++.++++.. + +.|.++|..+++.+..+.....+ .++++|++++|+++. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t- 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT- 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC-
Confidence 46676666544 2 69999999999999988765555 899999999888876 367899999975
Q ss_pred cccceeeecCC-------CCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccC
Q 028802 70 KDCSDRFVGLS-------PNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEH 121 (203)
Q Consensus 70 ~~~~~~~~~~~-------~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~ 121 (203)
.+.+..+.. . ......+ ++|+|++++++.. .+.|.++|+.+++.+..+...
T Consensus 159 ~~vv~~I~v-~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 159 FLPIADIEL-PDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp CCEEEEEEE-TTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred CcEEEEEEC-CCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 355555432 1 1223445 8999999999874 578999999999988887653
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.94 E-value=3.2e-08 Score=73.42 Aligned_cols=143 Identities=7% Similarity=0.042 Sum_probs=92.6
Q ss_pred CcccccCCEEEE----EcC-------------CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC-----
Q 028802 1 MTFAADAMKLLG----TSG-------------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----- 58 (203)
Q Consensus 1 l~~sp~~~~l~~----~~~-------------d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d----- 58 (203)
++++|+|+++++ |.. .+.|+.|+..+++..... .......++|+|+++.|+++...
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~ 213 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHG 213 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---C
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCC
Confidence 357888987776 332 256788887666543332 33456789999999988777654
Q ss_pred -CeEEEEEcCCccc-cceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCC
Q 028802 59 -GTVLLYSWGYFKD-CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR 135 (203)
Q Consensus 59 -~~i~v~d~~~~~~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 135 (203)
+.|.+|++...+. ....+.......+..+ +.++|++. +++.+ .|.+|+. .++.+..+..+ . .+.+++|.|++
T Consensus 214 ~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~~~~~~~~~-~-~~~~~~f~~d~ 288 (305)
T 3dr2_A 214 SVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQLLGHIPTP-G-TASNCTFDQAQ 288 (305)
T ss_dssp CCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-TSCEEEEEECS-S-CCCEEEECTTS
T ss_pred CCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-CCCEEEEEECC-C-ceeEEEEeCCC
Confidence 6899999864220 0111111012334456 78899844 44444 4999997 57777777665 3 57889999999
Q ss_pred CeEEEEeCCCcEEEEe
Q 028802 136 KFLGSISHDSMLKLWD 151 (203)
Q Consensus 136 ~~l~~~~~d~~i~iwd 151 (203)
+.|+.++.+ .|+.++
T Consensus 289 ~~L~it~~~-~l~~~~ 303 (305)
T 3dr2_A 289 QRLFITGGP-CLWMLP 303 (305)
T ss_dssp CEEEEEETT-EEEEEE
T ss_pred CEEEEEcCC-eEEEEE
Confidence 888887765 444444
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.93 E-value=2.1e-08 Score=76.68 Aligned_cols=151 Identities=12% Similarity=0.011 Sum_probs=101.2
Q ss_pred CcccccCCEEEEEc----------CCCeEEEEEcCCCeEEEeecCCc-------ccEEEEEEeeCCCEEEEecC--CCeE
Q 028802 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFSE-------EELTSVVLMKNGRKVVCGSQ--SGTV 61 (203)
Q Consensus 1 l~~sp~~~~l~~~~----------~d~~i~v~d~~~~~~~~~~~~~~-------~~i~~l~~~~~~~~l~~~~~--d~~i 61 (203)
|++||||++|+++. .++.|.+||..+.+.+..+.... .....++++|||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 47899999887765 36789999999998887774321 23557899999999988864 6899
Q ss_pred EEEEcCCccccceeeecCCCCceeEEEeeCCCEEEEEcCCCcEEEEEccC-CceeeeeccCC---CcceE-EEEEe-CCC
Q 028802 62 LLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILP-NRIIQPIAEHS---EYPIE-SLALS-HDR 135 (203)
Q Consensus 62 ~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~-~~~~~~~~~~~---~~~i~-~~~~~-~~~ 135 (203)
.++|+.+ .+.+..+.. .+ ...++....+.+++.+.||.+.+.++.+ ++........- ..++. ...|. ++|
T Consensus 163 sVID~~t-~~vv~tI~v--~g-~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 163 GVVDLEG-KAFKRMLDV--PD-CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEETTT-TEEEEEEEC--CS-EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEECCC-CcEEEEEEC--CC-cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 9999975 466666653 22 1222333456677888899988888876 55432211110 11222 24665 677
Q ss_pred CeEEEEeCCCcEEEEeCCCcc
Q 028802 136 KFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 136 ~~l~~~~~d~~i~iwd~~~~~ 156 (203)
++++ .+.++.+++.|+.+..
T Consensus 239 ~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEEE-EBTTSEEEEEECTTSS
T ss_pred cEEE-EeCCCEEEEEECCCCc
Confidence 5544 5558999999997653
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.92 E-value=1.8e-07 Score=70.13 Aligned_cols=136 Identities=13% Similarity=0.061 Sum_probs=88.9
Q ss_pred CcccccCCEEEEEcC------CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEe-cCCCeEEEEEcC-Ccc-c
Q 028802 1 MTFAADAMKLLGTSG------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWG-YFK-D 71 (203)
Q Consensus 1 l~~sp~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~d~~i~v~d~~-~~~-~ 71 (203)
++++|+|+++++... .+.|+.++ +++... +.........++|+|+++.|+.+ +.++.|.+|++. ..+ .
T Consensus 139 i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~ 215 (326)
T 2ghs_A 139 GRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP 215 (326)
T ss_dssp EEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB
T ss_pred EEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc
Confidence 357889987665432 25666666 454432 22223456789999999877554 457899999985 122 1
Q ss_pred c--ceee---ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEe-CCCCeEEEEe
Q 028802 72 C--SDRF---VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALS-HDRKFLGSIS 142 (203)
Q Consensus 72 ~--~~~~---~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~ 142 (203)
. ...+ .. ....+..+ +.++|.++++....+.|.+|+. +++.+..+..+.. .+++++|. +++..|++++
T Consensus 216 ~~~~~~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~-~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 216 TGKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK-QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp SSCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS-BEEEEEEESTTSCEEEEEE
T ss_pred ccCceEEEECCC-CCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCC-CcEEEEEecCCCCEEEEEe
Confidence 1 1122 22 23445666 7889987777666788999998 5777777766633 68999998 8888776554
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.90 E-value=9.3e-08 Score=78.83 Aligned_cols=154 Identities=10% Similarity=0.054 Sum_probs=105.0
Q ss_pred cccccCCEEEEEcCCCe-------------------EEEEEcCCCeEEEeecC--Cc-------ccEEEEEEeeCCC---
Q 028802 2 TFAADAMKLLGTSGDGT-------------------LSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNGR--- 50 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~-------------------i~v~d~~~~~~~~~~~~--~~-------~~i~~l~~~~~~~--- 50 (203)
+++|+..+|++++.++. |..+|..+|+.+..++. |. .++.......+|.
T Consensus 241 ~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~ 320 (689)
T 1yiq_A 241 AYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRK 320 (689)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEE
Confidence 45677888888887764 99999999999887753 21 1222223334565
Q ss_pred EEEEecCCCeEEEEEcCCccccceeeecCC---------------------------C----------C-ceeEE-EeeC
Q 028802 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLS---------------------------P----------N-SVDAL-LKLD 91 (203)
Q Consensus 51 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---------------------------~----------~-~v~~~-~~~~ 91 (203)
.++.++.+|.++++|..+ ++.+....-.. . . ....+ ++|+
T Consensus 321 ~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~ 399 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRAT-GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPD 399 (689)
T ss_dssp EEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred EEEEECCCCeEEEEECCC-CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCC
Confidence 788899999999999875 34432111000 0 0 01113 6777
Q ss_pred CCEEEEEcC---------------------------------------------CCcEEEEEccCCceeeeeccCCCcce
Q 028802 92 EDRVITGSE---------------------------------------------NGLISLVGILPNRIIQPIAEHSEYPI 126 (203)
Q Consensus 92 ~~~l~~~~~---------------------------------------------dg~v~v~d~~~~~~~~~~~~~~~~~i 126 (203)
..++++... +|.|+.||+.+++.+..+..+. ++
T Consensus 400 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~--~~ 477 (689)
T 1yiq_A 400 TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT--IF 477 (689)
T ss_dssp TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS--SC
T ss_pred CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC--Cc
Confidence 777776522 3779999999999998887663 34
Q ss_pred EEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 127 ESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 127 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
....+...+..+++++.|+.|+.||.++++..
T Consensus 478 ~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 478 NGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 44466677889999999999999999998654
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.87 E-value=1e-10 Score=89.41 Aligned_cols=144 Identities=11% Similarity=0.003 Sum_probs=78.2
Q ss_pred cccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcc-cEE-EEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC
Q 028802 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-ELT-SVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (203)
Q Consensus 4 sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~i~-~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 81 (203)
.+++..+++++.|+.|+.||..+++.+.....+.. .+. +..+. .+..|++++.++.++.||..+ ++.+..+.. +.
T Consensus 46 ~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~-~~ 122 (369)
T 2hz6_A 46 HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLT-GEKQQTLSS-AF 122 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------
T ss_pred EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCC-CcEEEEecC-CC
Confidence 34666777778999999999988877665543321 110 01111 345677888899999999975 454444443 22
Q ss_pred CceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCC---CeEEEEeCCCcEEEEeCCCccc
Q 028802 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR---KFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
.. ++|++..+++++.++.|+.||..+|+.+..+..+ .....++.++. ..+++++.++.|+.||..++..
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~---~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF---DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEE---EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc---cccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 12 5678889999999999999999999887665432 12223344432 5677788899999999988764
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=2.6e-07 Score=69.73 Aligned_cols=149 Identities=12% Similarity=0.104 Sum_probs=93.7
Q ss_pred CcccccCCEEEEEcC--CCeEEEEEcCCCeEEEeec-------CCcccEEEEEEeeCCCEEEEecC-----CCeEEEEEc
Q 028802 1 MTFAADAMKLLGTSG--DGTLSVCNLRKNTVQTRSE-------FSEEELTSVVLMKNGRKVVCGSQ-----SGTVLLYSW 66 (203)
Q Consensus 1 l~~sp~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~-------~~~~~i~~l~~~~~~~~l~~~~~-----d~~i~v~d~ 66 (203)
|+++|+|+.+++... ++.++||.+.+++.. .+. .+-..+..++++++++++++-.. ...|.+||+
T Consensus 22 va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 22 ITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred EEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 468899998888632 342444544455433 221 23457899999999876665433 578999998
Q ss_pred CCccccceeeec-----CCCCceeEE-EeeCCCEEEEE-c---CCCcEEEEEccCCceeeeeccCC--------------
Q 028802 67 GYFKDCSDRFVG-----LSPNSVDAL-LKLDEDRVITG-S---ENGLISLVGILPNRIIQPIAEHS-------------- 122 (203)
Q Consensus 67 ~~~~~~~~~~~~-----~~~~~v~~~-~~~~~~~l~~~-~---~dg~v~v~d~~~~~~~~~~~~~~-------------- 122 (203)
.+ +..+..+.. .+...+..+ ++|++..++.+ . .++.|.+||+.+++....+..|.
T Consensus 101 ~t-g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~ 179 (343)
T 2qe8_A 101 LN-NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp TT-TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred CC-CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCE
Confidence 64 344444432 012235667 78765555444 3 57889999998877655443310
Q ss_pred --------------CcceEEEEEeCCCCeEEEEeCCC-cEEEEe
Q 028802 123 --------------EYPIESLALSHDRKFLGSISHDS-MLKLWD 151 (203)
Q Consensus 123 --------------~~~i~~~~~~~~~~~l~~~~~d~-~i~iwd 151 (203)
...+..|+|+|++++|+++...+ .|..++
T Consensus 180 ~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 01357899999999988887655 555554
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=1.8e-07 Score=72.47 Aligned_cols=149 Identities=11% Similarity=0.017 Sum_probs=101.3
Q ss_pred cccccCCEEEEEcCC------CeEEEEEcCCCeEEEeecCCcc---cEEEEEEeeCCCEEEEec----------------
Q 028802 2 TFAADAMKLLGTSGD------GTLSVCNLRKNTVQTRSEFSEE---ELTSVVLMKNGRKVVCGS---------------- 56 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~---~i~~l~~~~~~~~l~~~~---------------- 56 (203)
..+|+| .++++..+ +.|.++|..+.+.+..+..... --..+.|+|+++.++++.
T Consensus 144 ~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 144 HCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp EECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred eECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence 356888 66665444 7899999999999888863322 234578899999988885
Q ss_pred ---CCCeEEEEEcCCccccceeeecCCC--CceeEE---EeeCCCEEEEEcC------CCcEEEEEccCCce--eeee--
Q 028802 57 ---QSGTVLLYSWGYFKDCSDRFVGLSP--NSVDAL---LKLDEDRVITGSE------NGLISLVGILPNRI--IQPI-- 118 (203)
Q Consensus 57 ---~d~~i~v~d~~~~~~~~~~~~~~~~--~~v~~~---~~~~~~~l~~~~~------dg~v~v~d~~~~~~--~~~~-- 118 (203)
...+|.+||+.. .+.+..+.. .. .....+ ++|+++++++++. ++.|.+|....+.. ++.+
T Consensus 223 ~~~~~d~V~v~D~~~-~k~~~tI~v-g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 223 KDRYGNRIHFWDLRK-RKRIHSLTL-GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp HHHSCCEEEEEETTT-TEEEEEEES-CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred hhccCCEEEEEECCC-CcEeeEEec-CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence 368999999975 455666554 21 223334 4999999888875 55777665543321 1111
Q ss_pred ccC---------------CCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCC
Q 028802 119 AEH---------------SEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (203)
Q Consensus 119 ~~~---------------~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (203)
... .......|.++|||++|+++. ..+.|.+||+.
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 000 012467899999999998777 57899999985
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.86 E-value=2.5e-07 Score=71.69 Aligned_cols=145 Identities=10% Similarity=0.042 Sum_probs=99.9
Q ss_pred ccCCEEEE-EcCCCeEEEEEcCCC----eEEEeec-------CCcccEEEEEEeeCCCEEEEecCC------CeEEEEEc
Q 028802 5 ADAMKLLG-TSGDGTLSVCNLRKN----TVQTRSE-------FSEEELTSVVLMKNGRKVVCGSQS------GTVLLYSW 66 (203)
Q Consensus 5 p~~~~l~~-~~~d~~i~v~d~~~~----~~~~~~~-------~~~~~i~~l~~~~~~~~l~~~~~d------~~i~v~d~ 66 (203)
+++++|++ +..++.|+|+|+.+. +...+++ ........+..+|+| .++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77887755 566889999998754 6666663 122356677888999 66665544 78999998
Q ss_pred CCccccceeeecCCCCc---eeEE-EeeCCCEEEEEc-------------------CCCcEEEEEccCCceeeeeccCC-
Q 028802 67 GYFKDCSDRFVGLSPNS---VDAL-LKLDEDRVITGS-------------------ENGLISLVGILPNRIIQPIAEHS- 122 (203)
Q Consensus 67 ~~~~~~~~~~~~~~~~~---v~~~-~~~~~~~l~~~~-------------------~dg~v~v~d~~~~~~~~~~~~~~- 122 (203)
.+ .+.+..+.. ...+ -..+ |+|+++.+++.. ....|.+||+.+++.+.++....
T Consensus 172 ~T-~~v~~~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 172 YS-FEPLGKWEI-DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TT-CCEEEECCS-BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CC-CeEEEEEcc-CCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 75 456666653 2221 2345 799999988885 36789999999988888876641
Q ss_pred CcceEEEEE--eCCCCeEEEEe------CCCcEEEEeC
Q 028802 123 EYPIESLAL--SHDRKFLGSIS------HDSMLKLWDL 152 (203)
Q Consensus 123 ~~~i~~~~~--~~~~~~l~~~~------~d~~i~iwd~ 152 (203)
+.....+.| +|+++++++++ .+++|.+|..
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 223445655 99999987666 4567766544
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.85 E-value=2.5e-07 Score=66.74 Aligned_cols=151 Identities=9% Similarity=0.080 Sum_probs=103.2
Q ss_pred cccccCCEEEEEcCCC--eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEec-CCCeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKLLGTSGDG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
.|+ ++.++.+++.+| .|+++|+.+++.+..+.... ......+.+++..|+... .++.+.+||..+ .+.+..+..
T Consensus 49 ~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t-~~~~~ti~~ 125 (262)
T 3nol_A 49 FYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRN-LRQVRSFNY 125 (262)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTT-CCEEEEEEC
T ss_pred EEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECcc-CcEEEEEEC
Confidence 466 565556666655 89999999999888776533 343444445566666655 488999999975 466666664
Q ss_pred CCCCceeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCC-C---cceEEEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-E---YPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~-~---~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
.... +. +++++..|+.+...+.|+++|..+.+.+..+.... + ..+..+.|. +|+..+..-.+..|.+.|.++
T Consensus 126 -~~eG-~g-lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 126 -DGEG-WG-LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp -SSCC-CC-EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred -CCCc-eE-EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 3221 22 45778888877778889999999998887775531 1 134557776 675555444688999999998
Q ss_pred cccCC
Q 028802 155 ILKGS 159 (203)
Q Consensus 155 ~~~~~ 159 (203)
+....
T Consensus 202 G~V~~ 206 (262)
T 3nol_A 202 GKVTG 206 (262)
T ss_dssp CBEEE
T ss_pred CcEEE
Confidence 87543
No 230
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=3.1e-07 Score=66.34 Aligned_cols=146 Identities=12% Similarity=-0.010 Sum_probs=99.9
Q ss_pred CCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEe-cCCCeEEEEEcCCccccceeeecCCCCcee
Q 028802 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRFVGLSPNSVD 85 (203)
Q Consensus 7 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 85 (203)
+.++.+.+.+|.|+++|+.+++.+..+ .. .........+++..|+.. -.++.+.+||..+ .+.+..+.. .... +
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T-l~~~~ti~~-~~eG-w 139 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFTWSGMP-PQRERTTRY-SGEG-W 139 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEEEETTT-TEEEEEEEC-SSCC-C
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEEEECCc-CcEEEEEeC-CCce-e
Confidence 455567778889999999999887776 32 333333334455555544 4588999999975 466666664 3222 2
Q ss_pred EEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCC----cceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 86 ALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE----YPIESLALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 86 ~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
. ++++++.|+.+...+.|+++|..+.+.+..+..... ..+..+.|. +|+..+....+..|.+.|.+++....
T Consensus 140 G-Lt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 140 G-LCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp C-EEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEE
T ss_pred E-EecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEE
Confidence 2 357788888888889999999999988877754321 134667776 77544444467899999999887543
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.82 E-value=1.7e-07 Score=77.16 Aligned_cols=154 Identities=10% Similarity=0.088 Sum_probs=107.6
Q ss_pred cccccCCEEEEEcCCC-------------------eEEEEEcCCCeEEEeecC--Cc-------ccEEEEEEeeCC---C
Q 028802 2 TFAADAMKLLGTSGDG-------------------TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNG---R 50 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~-------------------~i~v~d~~~~~~~~~~~~--~~-------~~i~~l~~~~~~---~ 50 (203)
+++|++.+|+.++.++ .|..+|..+|+.+..++. |. .....+....+| .
T Consensus 249 ~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~ 328 (677)
T 1kb0_A 249 TFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRK 328 (677)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEee
Confidence 4567888888877654 599999999998877653 21 122233444577 6
Q ss_pred EEEEecCCCeEEEEEcCCccccceeeecCCC-----------Cce------------------------eEE-EeeCCCE
Q 028802 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP-----------NSV------------------------DAL-LKLDEDR 94 (203)
Q Consensus 51 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-----------~~v------------------------~~~-~~~~~~~ 94 (203)
.+++++.+|.++++|..+ ++.+..+.. .. .++ ..+ ++|+..+
T Consensus 329 ~l~~~~~~G~l~~lD~~t-G~~l~~~~~-~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~ 406 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTN-GKFISAKNF-VPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (677)
T ss_dssp EEEECCTTSEEEEEETTT-CCEEEEEES-SCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred EEEEECCCCEEEEEECCC-CCEeccccc-cccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence 788999999999999875 344433221 10 000 123 6888888
Q ss_pred EEEEcC-------------------------------------------CCcEEEEEccCCceeeeeccCCCcceEEEEE
Q 028802 95 VITGSE-------------------------------------------NGLISLVGILPNRIIQPIAEHSEYPIESLAL 131 (203)
Q Consensus 95 l~~~~~-------------------------------------------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~ 131 (203)
+++... .+.|..||+.+++.+..+... . ++....+
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~-~~~~g~~ 484 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-S-PWNGGTL 484 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-S-SCCCCEE
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-C-CCcCcce
Confidence 877543 167999999999998887654 2 4555567
Q ss_pred eCCCCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 132 SHDRKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 132 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
...+..+++++.|+.+++||+++++...
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceee
Confidence 7788888889999999999999987643
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=1.7e-07 Score=70.80 Aligned_cols=146 Identities=6% Similarity=0.003 Sum_probs=91.6
Q ss_pred CcccccCCEE-EEEc---CCCeEEEEEcCCCeEEEeecCCc-----------------------------ccEEEEEEee
Q 028802 1 MTFAADAMKL-LGTS---GDGTLSVCNLRKNTVQTRSEFSE-----------------------------EELTSVVLMK 47 (203)
Q Consensus 1 l~~sp~~~~l-~~~~---~d~~i~v~d~~~~~~~~~~~~~~-----------------------------~~i~~l~~~~ 47 (203)
|+++|++..+ ++-. .++.|.+||+.+++....+..|. ..+..|+|+|
T Consensus 125 v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~ 204 (343)
T 2qe8_A 125 LAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA 204 (343)
T ss_dssp EEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT
T ss_pred EEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc
Confidence 3567655454 4433 57899999998876655553311 2357899999
Q ss_pred CCCEEEEecCCC-eEEEEEcCCc--c-----cccee--eecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceee
Q 028802 48 NGRKVVCGSQSG-TVLLYSWGYF--K-----DCSDR--FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQ 116 (203)
Q Consensus 48 ~~~~l~~~~~d~-~i~v~d~~~~--~-----~~~~~--~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~ 116 (203)
+++.|+++...+ .+..++.... . ..... ..+ +......+ ++++|.++++....+.|.+||..+++...
T Consensus 205 dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~ 283 (343)
T 2qe8_A 205 ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKL 283 (343)
T ss_dssp TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEE
Confidence 999888877655 5555554210 0 00111 112 23344556 78999999888889999999985565433
Q ss_pred eeccCCCcceEEEEEeCCCCeEEEEeCCCcE
Q 028802 117 PIAEHSEYPIESLALSHDRKFLGSISHDSML 147 (203)
Q Consensus 117 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 147 (203)
.........+.+++|.+++..+++.+..+.+
T Consensus 284 ~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 284 LVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred EEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 3322112257899999998877776644333
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.78 E-value=5.7e-06 Score=59.97 Aligned_cols=151 Identities=9% Similarity=-0.044 Sum_probs=95.5
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEe-cCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|+++.|+.+ ...+.|.++++........+.........+++++++..|+.+ ...+.|.++++.. .....+..
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g--~~~~~~~~ 118 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG--TQRRVLFD 118 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEC
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC--CCEEEEEE
Confidence 3677766655544 456889999987654433333333567899999976655544 4568899999863 22233322
Q ss_pred CCCCceeEE-EeeCCCEEEEEcC---CCcEEEEEccCCceeeeec-cCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSE---NGLISLVGILPNRIIQPIA-EHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~---dg~v~v~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (203)
........+ ++|++..|+.+.. .+.|..+++.. .....+. .. ......++++|++..|+.+. ..+.|.++++
T Consensus 119 ~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 119 TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECC-CCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 022345667 8997666665554 36788888753 3222222 22 12578899999887765555 5688999998
Q ss_pred CCc
Q 028802 153 DDI 155 (203)
Q Consensus 153 ~~~ 155 (203)
.+.
T Consensus 197 ~g~ 199 (267)
T 1npe_A 197 AQP 199 (267)
T ss_dssp TEE
T ss_pred CCC
Confidence 764
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.75 E-value=1.2e-06 Score=63.70 Aligned_cols=147 Identities=9% Similarity=-0.043 Sum_probs=100.3
Q ss_pred ccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCC-cccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-CCC
Q 028802 5 ADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSP 81 (203)
Q Consensus 5 p~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~ 81 (203)
.+++.|+.+ -.++.+.++|..+.+.+..+... .. ...+++++..++++..++.|.++|..+. +....+.. ...
T Consensus 73 ~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~-~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 73 LLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTF-KLIKKHNVKYNG 148 (266)
T ss_dssp EETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTC-CEEEEEECEETT
T ss_pred EeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCC-cEEEEEEECCCC
Confidence 345555444 46799999999999888888643 22 2446678887877777899999998753 44444442 011
Q ss_pred C---ceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccC------------CCcceEEEEEeCCCCeE-EEEeCC
Q 028802 82 N---SVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLALSHDRKFL-GSISHD 144 (203)
Q Consensus 82 ~---~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~l-~~~~~d 144 (203)
. .+..+ |. ++...+.....+.|.+.|+.+++.+..+... .......|+|+|+++.| +++...
T Consensus 149 ~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 149 HRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp EECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred cccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 1 24455 55 6654444445789999999999988877542 01145899999998765 455578
Q ss_pred CcEEEEeCCCcc
Q 028802 145 SMLKLWDLDDIL 156 (203)
Q Consensus 145 ~~i~iwd~~~~~ 156 (203)
+.|.+.++....
T Consensus 228 ~~v~~i~l~~~~ 239 (266)
T 2iwa_A 228 PKLFEIKLHLVR 239 (266)
T ss_dssp SEEEEEEEEECC
T ss_pred CeEEEEEEeccc
Confidence 889999887653
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.74 E-value=4.8e-07 Score=72.38 Aligned_cols=144 Identities=10% Similarity=0.028 Sum_probs=100.7
Q ss_pred ccCCEEEEEc------------------CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCC-------
Q 028802 5 ADAMKLLGTS------------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG------- 59 (203)
Q Consensus 5 p~~~~l~~~~------------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~------- 59 (203)
|+++++++++ .++.+.++|..+.+.+..+.-.. ....++++|+|+++++++.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchh
Confidence 8899988874 24679999999998888776433 356678999999998877543
Q ss_pred -------------------------------eEEEEEcCCc-ccc-ceeeecCCCCceeEE-EeeCCCEEEEEc-CCCcE
Q 028802 60 -------------------------------TVLLYSWGYF-KDC-SDRFVGLSPNSVDAL-LKLDEDRVITGS-ENGLI 104 (203)
Q Consensus 60 -------------------------------~i~v~d~~~~-~~~-~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~dg~v 104 (203)
.|.|.|.... +.. +..+.. .....++ ++|||+++++++ .+..|
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~V 301 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTV 301 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeE
Confidence 3555555431 112 233332 2234455 899999888776 47889
Q ss_pred EEEEccCCc------------eeeeeccCCCcceEEEEEeCCCCeEE-EEeCCCcEEEEeCCC
Q 028802 105 SLVGILPNR------------IIQPIAEHSEYPIESLALSHDRKFLG-SISHDSMLKLWDLDD 154 (203)
Q Consensus 105 ~v~d~~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~ 154 (203)
.++|+.+.+ ....+... .....++|+|+| +++ +.-.|+.|.+|++.+
T Consensus 302 sVid~~~~~~~~~~~l~~~~~v~~~v~vG--~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 302 TVLDVTRFDAVFYENADPRSAVVAEPELG--LGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEGGGHHHHHHSCCCGGGGEEECCBCC--SCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred EEEECcccccccccccCcccceEEEcCCC--CCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 999998652 33444433 257889999999 554 555899999999877
No 236
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=2.6e-06 Score=60.84 Aligned_cols=152 Identities=11% Similarity=0.054 Sum_probs=100.6
Q ss_pred cccccCCEEEEEcCC--CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEec-CCCeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKLLGTSGD--GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
.|++ +.++.+.+.. ..|+++|+.+++.+..+..... .......+.+..|+... .++.+.+||..+ .+.+.++..
T Consensus 27 ~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t-l~~~~ti~~ 103 (243)
T 3mbr_X 27 FYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLAT-LTPRARFRY 103 (243)
T ss_dssp EEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTT-TEEEEEEEC
T ss_pred EEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCc-CcEEEEEeC
Confidence 4554 4445555554 4899999999998887764332 33333344455555544 588999999975 466666664
Q ss_pred CCCCceeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCC----cceEEEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE----YPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
... -+.+ .+++..|+.+..++.|+++|..+.+.+..+..... ..+..+.|. +|+.++..-.+..|.+.|.++
T Consensus 104 -~~~-Gwgl-t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 104 -PGE-GWAL-TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp -SSC-CCEE-EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred -CCC-ceEE-eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 322 2333 56777777777788999999999988877754311 135566665 665554444678999999998
Q ss_pred cccCCC
Q 028802 155 ILKGSG 160 (203)
Q Consensus 155 ~~~~~~ 160 (203)
+.....
T Consensus 180 G~V~~~ 185 (243)
T 3mbr_X 180 GKVVAW 185 (243)
T ss_dssp CBEEEE
T ss_pred CCEEEE
Confidence 875533
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.71 E-value=7.6e-07 Score=73.28 Aligned_cols=144 Identities=9% Similarity=0.035 Sum_probs=99.5
Q ss_pred CEEEEEcCCCeEEEEEcCCCeEEEeecCCc-----------ccE------------------------EEEEEeeCCCEE
Q 028802 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-----------EEL------------------------TSVVLMKNGRKV 52 (203)
Q Consensus 8 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-----------~~i------------------------~~l~~~~~~~~l 52 (203)
..|+.++.+|.|+++|..+|+++..+.... .++ ..++++|++.++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 578889999999999999998876654211 011 146788988888
Q ss_pred EEecC-------------------------------------------CCeEEEEEcCCccccceeeecCCCCceeEE-E
Q 028802 53 VCGSQ-------------------------------------------SGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-L 88 (203)
Q Consensus 53 ~~~~~-------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~ 88 (203)
++... .+.|..||+.+. +.+-.+.. ..++... +
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~--~~~~~~g~~ 484 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ-KAAWSVEH--VSPWNGGTL 484 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT-EEEEEEEE--SSSCCCCEE
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC-cEEeecCC--CCCCcCcce
Confidence 77533 167999998764 44434432 2233333 6
Q ss_pred eeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeE-EEEeC----------------CCcEEEEe
Q 028802 89 KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL-GSISH----------------DSMLKLWD 151 (203)
Q Consensus 89 ~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~----------------d~~i~iwd 151 (203)
...+.+++.++.+|.+++||..+++.+..+.........-+.|.++|+.+ ++.+. .+.+.+|.
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~ 564 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFV 564 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEe
Confidence 77888899999999999999999999988876543233446677888654 43222 36788888
Q ss_pred CCC
Q 028802 152 LDD 154 (203)
Q Consensus 152 ~~~ 154 (203)
+..
T Consensus 565 l~~ 567 (677)
T 1kb0_A 565 VGG 567 (677)
T ss_dssp ETC
T ss_pred ccc
Confidence 763
No 238
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.70 E-value=3.3e-06 Score=65.81 Aligned_cols=148 Identities=5% Similarity=0.058 Sum_probs=92.7
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC-C----eEEEEEcCCccccc-
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS-G----TVLLYSWGYFKDCS- 73 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-~----~i~v~d~~~~~~~~- 73 (203)
|+|+| ++..|+++...+.|+++|+.++....... .......|+|++++++|+++... + .+.+++.. +...
T Consensus 142 lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~--g~~~~ 218 (430)
T 3tc9_A 142 LSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE--SGFKV 218 (430)
T ss_dssp EEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG--GTSCS
T ss_pred EEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC--Cceee
Confidence 46787 45566665554889999988776544433 45568899999999966666542 1 34444432 2221
Q ss_pred -eeeecCCCCceeEE-Eee-CCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEE
Q 028802 74 -DRFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKL 149 (203)
Q Consensus 74 -~~~~~~~~~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i 149 (203)
..+.. . .....+ ++| ++.++++-...+.|+.++...+................++|+|+|++|+.+. ..+.|..
T Consensus 219 ~~~l~~-~-~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 219 ITELTK-G-QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp EEEEEE-C-SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeecc-C-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 22222 2 223445 788 6666666667789999998766542222222112467899999999665554 6788999
Q ss_pred EeCC
Q 028802 150 WDLD 153 (203)
Q Consensus 150 wd~~ 153 (203)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 8765
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.67 E-value=1.6e-06 Score=69.39 Aligned_cols=146 Identities=10% Similarity=0.062 Sum_probs=103.5
Q ss_pred ccCCEEEEEcC-CCeEEEEEcCCCeEEEeecCC-cccEEEEEE-e-eCCCEEEEec------------------CCCeEE
Q 028802 5 ADAMKLLGTSG-DGTLSVCNLRKNTVQTRSEFS-EEELTSVVL-M-KNGRKVVCGS------------------QSGTVL 62 (203)
Q Consensus 5 p~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~-~~~i~~l~~-~-~~~~~l~~~~------------------~d~~i~ 62 (203)
+||++|++... ++.|.+.|+.+.++...+... ...+..+++ + |++.++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 38888877654 567999999999887755422 245788887 5 8999998884 245788
Q ss_pred EEEcCCccccceeeecCCCCceeEE-EeeCCCEEEEEcCCC--------------------------------------c
Q 028802 63 LYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENG--------------------------------------L 103 (203)
Q Consensus 63 v~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg--------------------------------------~ 103 (203)
+.|..+ .+...++.- .. ....+ ++|+|+++++.+.+. .
T Consensus 179 vID~~t-~~v~~qI~V-gg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 179 AVDADK-WEVAWQVLV-SG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEETTT-TEEEEEEEE-SS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEECCC-CeEEEEEEe-CC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 899875 344444443 23 33444 799999988887542 4
Q ss_pred EEEEEccC--Cce-eeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCCCc
Q 028802 104 ISLVGILP--NRI-IQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDDI 155 (203)
Q Consensus 104 v~v~d~~~--~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 155 (203)
|.|.|..+ ++. +..+... . ...++.++|||+++++++ .+.+|.++|+.+.
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg-~-~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIA-N-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEE-S-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred EEEEeCcccCCceeEEEEecC-C-CceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 77777776 444 4455444 2 467899999999987666 7889999999976
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.56 E-value=2.5e-06 Score=70.40 Aligned_cols=131 Identities=11% Similarity=0.035 Sum_probs=88.9
Q ss_pred EEEEEcCCCeEEEEEcCCCeEEEeecCCc----------------------------cc-----------EEEEEEeeCC
Q 028802 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSE----------------------------EE-----------LTSVVLMKNG 49 (203)
Q Consensus 9 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~----------------------------~~-----------i~~l~~~~~~ 49 (203)
.|+.++.+|.++++|..+|+++....... .. -..++++|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 67888999999999999998874332110 00 0126788887
Q ss_pred CEEEEecC---------------------------------------------CCeEEEEEcCCccccceeeecCCCCce
Q 028802 50 RKVVCGSQ---------------------------------------------SGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (203)
Q Consensus 50 ~~l~~~~~---------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~~~v 84 (203)
.++++... +|.|..||+.+. +.+-.+.. +....
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG-~~~W~~~~-~~~~~ 478 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ-QAAWEVPY-VTIFN 478 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT-EEEEEEEE-SSSCC
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC-CeEeEccC-CCCcc
Confidence 77776522 377999999764 44444443 33222
Q ss_pred eEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCe-EEEE
Q 028802 85 DALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF-LGSI 141 (203)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~ 141 (203)
...+...+.+++.++.|+.|+.||.++|+.+..+.........-+.|..+|+. +++.
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 23467788899999999999999999999998887664322234677888864 4433
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.55 E-value=8.1e-06 Score=60.88 Aligned_cols=149 Identities=9% Similarity=-0.032 Sum_probs=92.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEee-cC------------------CcccEEEEEEee-CCCEEEEecCCCe
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRS-EF------------------SEEELTSVVLMK-NGRKVVCGSQSGT 60 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~------------------~~~~i~~l~~~~-~~~~l~~~~~d~~ 60 (203)
++|++++++++++..++.|..|+..++...... .. ....+..+++.+ +++ |+++...+.
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~ 102 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYH 102 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCC
Confidence 467888887888888899999998765432211 00 013578899997 554 555544455
Q ss_pred EEEEEcCCccccceeeec----CCCCceeEE-Eee-CCCEEEEEcC-----------------CCcEEEEEccCCceeee
Q 028802 61 VLLYSWGYFKDCSDRFVG----LSPNSVDAL-LKL-DEDRVITGSE-----------------NGLISLVGILPNRIIQP 117 (203)
Q Consensus 61 i~v~d~~~~~~~~~~~~~----~~~~~v~~~-~~~-~~~~l~~~~~-----------------dg~v~v~d~~~~~~~~~ 117 (203)
+..+|... ..+..+.. ........+ +.+ +|.+.++-.. .+.|..||..+++....
T Consensus 103 i~~~d~~~--g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 103 LSVVGSEG--GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEECTTC--EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EEEEeCCC--CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 88887652 22222221 011234566 788 8877665432 36788888776654332
Q ss_pred eccCCCcceEEEEEeCCCCeEEEE-eCCCcEEEEeCCC
Q 028802 118 IAEHSEYPIESLALSHDRKFLGSI-SHDSMLKLWDLDD 154 (203)
Q Consensus 118 ~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iwd~~~ 154 (203)
.... . ....++|+|++++|+.+ ...+.|.+|++.+
T Consensus 181 ~~~~-~-~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 181 LKEL-H-VPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEE-S-CCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ccCC-c-cCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 2221 1 34678999999876655 4568899999875
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.55 E-value=1.2e-05 Score=61.04 Aligned_cols=146 Identities=8% Similarity=-0.018 Sum_probs=95.4
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecCC---------cccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceee
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS---------EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~---------~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 76 (203)
.+..|++++.++.|..+|..+++.+...... ...+.+. ...++..+++++.++.|..+|..+. +.+-..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG-~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDG-TVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTC-CEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCC-CEEEEE
Confidence 4567888888899999999999887766542 1223222 2234567888888999999998753 444333
Q ss_pred ecCCCCceeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcce-----EEEEEeCCCCeEEEEeCCCcEEEEe
Q 028802 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPI-----ESLALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
.. .......... .+..+++++.++.|..+|..+|+.+........ .. ...... +..++.++.++.|..+|
T Consensus 130 ~~-~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 130 KV-AGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTA--FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EC-SSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC------CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred eC-CCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence 33 2221111122 245788888899999999999998877655421 11 122222 45677788889999999
Q ss_pred CCCcccC
Q 028802 152 LDDILKG 158 (203)
Q Consensus 152 ~~~~~~~ 158 (203)
..++...
T Consensus 205 ~~tG~~~ 211 (376)
T 3q7m_A 205 MEQGQMI 211 (376)
T ss_dssp TTTCCEE
T ss_pred CCCCcEE
Confidence 9877643
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.53 E-value=2.8e-06 Score=70.79 Aligned_cols=150 Identities=7% Similarity=0.001 Sum_probs=87.3
Q ss_pred ccc-ccCCEEEEEcC-C----CeEEEEEcCCC-eEEE-eecCCcccEEEEEEeeCCCEEEEecCC-----CeEEEEEcCC
Q 028802 2 TFA-ADAMKLLGTSG-D----GTLSVCNLRKN-TVQT-RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGY 68 (203)
Q Consensus 2 ~~s-p~~~~l~~~~~-d----~~i~v~d~~~~-~~~~-~~~~~~~~i~~l~~~~~~~~l~~~~~d-----~~i~v~d~~~ 68 (203)
+|| |||++||.+.. + .+|+++|+.++ +.+. .+ ......++|+||++.|+....+ ..|+++++.+
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE---EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc---cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 689 99998876533 2 35999999988 6321 11 1123468899999888877654 2577777764
Q ss_pred cccc-ceeeecCCCCceeEE-EeeCCCEEEEEcC---CCcEEEEEccCCc-ee--eeeccCCCcceEEEEEeCCCCeEEE
Q 028802 69 FKDC-SDRFVGLSPNSVDAL-LKLDEDRVITGSE---NGLISLVGILPNR-II--QPIAEHSEYPIESLALSHDRKFLGS 140 (203)
Q Consensus 69 ~~~~-~~~~~~~~~~~v~~~-~~~~~~~l~~~~~---dg~v~v~d~~~~~-~~--~~~~~~~~~~i~~~~~~~~~~~l~~ 140 (203)
.... ...+..........+ |+|+|++|+..+. ...|+++|+.++. .. ..+.........++.|+..+.+++.
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~ 336 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVIL 336 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEE
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEE
Confidence 3211 122221022334455 8999999887653 3458889987652 12 3333222224555665544434444
Q ss_pred EeCC----CcEEEEeCCC
Q 028802 141 ISHD----SMLKLWDLDD 154 (203)
Q Consensus 141 ~~~d----~~i~iwd~~~ 154 (203)
...+ ..|.++++.+
T Consensus 337 t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 337 TNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp ECTTTCTTCEEEEEETTS
T ss_pred eCCCCCCCcEEEEEcCCC
Confidence 4333 3577777764
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.53 E-value=4.6e-05 Score=55.14 Aligned_cols=151 Identities=6% Similarity=-0.117 Sum_probs=91.3
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC---CCeEEEEEcCCccccceee
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ---SGTVLLYSWGYFKDCSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~ 76 (203)
|+++|++..|+.+ ...+.|.++++........+.........++++|++..|+.+.. .+.|.++++.. .....+
T Consensus 84 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~ 161 (267)
T 1npe_A 84 IALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNRRIL 161 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCCEEE
T ss_pred EEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--CCcEEE
Confidence 4577766555444 45678999988653322222222245789999997666655553 36888888752 333333
Q ss_pred ecCCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCC
Q 028802 77 VGLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (203)
..........+ ++|++..|+.+. ..+.|.++++........+... . ....++.. +..|+.+. ..+.|.++|..
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~-~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-Q-YPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-C-SEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-C-CceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 21023445667 899877666555 4678999998754333333322 2 34566654 45555444 66899999998
Q ss_pred Cccc
Q 028802 154 DILK 157 (203)
Q Consensus 154 ~~~~ 157 (203)
++..
T Consensus 238 ~g~~ 241 (267)
T 1npe_A 238 ISKE 241 (267)
T ss_dssp TTEE
T ss_pred CCCc
Confidence 7654
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.50 E-value=5.2e-06 Score=68.26 Aligned_cols=153 Identities=8% Similarity=0.043 Sum_probs=101.3
Q ss_pred cccccCCEEEEEcCCC-------------------eEEEEEcCCCeEEEeecC--Cc-------ccEEEEEEeeCCC---
Q 028802 2 TFAADAMKLLGTSGDG-------------------TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNGR--- 50 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~-------------------~i~v~d~~~~~~~~~~~~--~~-------~~i~~l~~~~~~~--- 50 (203)
+++|+..+++.++.++ .|..+|..+|+.+..++. |. .++....+..+++
T Consensus 236 a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~ 315 (668)
T 1kv9_A 236 AYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRK 315 (668)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred EEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEE
Confidence 4566778888887765 499999999999887754 21 2333333445665
Q ss_pred EEEEecCCCeEEEEEcCCccccceeeecCCC------------Cc------------------------eeEE-EeeCCC
Q 028802 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP------------NS------------------------VDAL-LKLDED 93 (203)
Q Consensus 51 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~------------~~------------------------v~~~-~~~~~~ 93 (203)
.++.++.+|.++++|..+ ++.+..+.. .. .+ -..+ ++|+..
T Consensus 316 ~v~~~~~~G~l~~lD~~t-G~~l~~~~~-~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTN-GKLISAEKF-GKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEECCTTSEEEEEETTT-CCEEEEEES-SCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEECCCCEEEEEECCC-CCEeccccc-cccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 688899999999999875 344321110 00 00 0012 566555
Q ss_pred EEEEE------------------------------------cCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCe
Q 028802 94 RVITG------------------------------------SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF 137 (203)
Q Consensus 94 ~l~~~------------------------------------~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 137 (203)
+++.. ..+|.|..||+.+++.+.....+. +.....+...+..
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~ 471 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT--HWNGGTLSTAGNL 471 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC--CCcCceeEeCCCE
Confidence 55431 123789999999999987776542 3444455567788
Q ss_pred EEEEeCCCcEEEEeCCCcccC
Q 028802 138 LGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~~~ 158 (203)
+++++.|+.|++||.++++..
T Consensus 472 vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 472 VFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEECTTSEEEEEETTTCCEE
T ss_pred EEEECCcccchhhhhhcChhh
Confidence 888999999999999988654
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.46 E-value=1e-06 Score=67.22 Aligned_cols=125 Identities=11% Similarity=-0.146 Sum_probs=88.0
Q ss_pred eEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEec----------CCCeEEEEEcCCccccceeeecCC-------
Q 028802 18 TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGYFKDCSDRFVGLS------- 80 (203)
Q Consensus 18 ~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~----------~d~~i~v~d~~~~~~~~~~~~~~~------- 80 (203)
+|.++|..+++.+.++.....+ .+.++|++++++++. .++.|.+||+.+ .+.+..+.. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T-~~vv~~I~v-~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT-FLPIADIEL-PDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT-CCEEEEEEE-TTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC-CCEEEEEEC-CCcccccc
Confidence 8899999999999988765566 799999999988886 368899999986 456666643 3
Q ss_pred CCceeEE-EeeCCCEEEEEcC--CCcEEE--EEccCCceeeeeccCCCcceEEEEEeCCCC-eEEEEeCCCcEEEEeCCC
Q 028802 81 PNSVDAL-LKLDEDRVITGSE--NGLISL--VGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~--dg~v~v--~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~ 154 (203)
......+ ++|+|++++++.. ...|.+ +|+.+ +..+... + + +.+.|++. .+++.+.|+.+.+.++.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~--~--~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-S--C--FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-S--C--CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-C--c--eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 1234455 8999999999875 456888 99877 4444332 1 1 12334443 344555677777777765
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.45 E-value=2.3e-05 Score=59.58 Aligned_cols=136 Identities=12% Similarity=0.133 Sum_probs=91.2
Q ss_pred CCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCceeE
Q 028802 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDA 86 (203)
Q Consensus 7 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~ 86 (203)
+..++.++.++.|..+|..+++.+...... ....+.. ++..+++++.++.+..+|..+. +.+-.........+..
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELG--SVNDFIV--DGNRIYLVDQNDRVMALTIDGG-VTLWTQSDLLHRLLTS 313 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEEEEE--ETTEEEEEETTCCEEEEETTTC-CEEEEECTTTTSCCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCCceE--ECCEEEEEcCCCeEEEEECCCC-cEEEeecccCCCcccC
Confidence 456777788899999999999887766532 2333333 4667888888999999998754 4333332101112222
Q ss_pred EEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEE-EEEeCCCCeEEEEeCCCcEEEEe
Q 028802 87 LLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIES-LALSHDRKFLGSISHDSMLKLWD 151 (203)
Q Consensus 87 ~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d~~i~iwd 151 (203)
+ ...+..+++++.+|.|+++|..+++.+........ .+.. ... .+..|+.++.+|.|+.|+
T Consensus 314 ~-~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~-~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 314 P-VLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSS-GFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp C-EEETTEEEEECTTSEEEEEETTTCCEEEEEECCTT-CBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred C-EEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-cceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 2 12356788899999999999999998877765322 2322 222 245788888899999987
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.45 E-value=2e-05 Score=56.82 Aligned_cols=134 Identities=11% Similarity=0.041 Sum_probs=90.2
Q ss_pred ccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-CCCC
Q 028802 5 ADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPN 82 (203)
Q Consensus 5 p~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~ 82 (203)
++++.|+.. ..++.+.+||..+.+.+.++..... ...+++++..|+.+...+.|.++|..+. +.+..+.. ....
T Consensus 94 ~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~-~v~~~I~V~~~g~ 169 (262)
T 3nol_A 94 DWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESL-TPVRTITVTAHGE 169 (262)
T ss_dssp EETTEEEEEESSSSEEEEEETTTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTC-SEEEEEECEETTE
T ss_pred EeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCC-eEEEEEEeccCCc
Confidence 445555544 4589999999999999888875332 2344567888887777888999998753 44444432 0122
Q ss_pred c---eeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCC-----------CcceEEEEEeCCCCeEEEEeC
Q 028802 83 S---VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-----------EYPIESLALSHDRKFLGSISH 143 (203)
Q Consensus 83 ~---v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l~~~~~ 143 (203)
+ +..+ +. +|...+..-....|.+.|..+++.+..+.... ..-...|+|+|+++.|++.+.
T Consensus 170 ~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 170 ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 3335 43 67655555467889999999999887775421 124578999999887776663
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.43 E-value=6.6e-06 Score=61.10 Aligned_cols=136 Identities=18% Similarity=0.086 Sum_probs=91.6
Q ss_pred CCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCceeE
Q 028802 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDA 86 (203)
Q Consensus 7 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~ 86 (203)
+..|.+++.++.|..++.. ++.......+...+.++...+++. |+.++.++.|..||.. +.....+.. ....+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~--g~~~~~~~~-~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD--GTEKWRFKT-NDAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT--SCEEEEEEC-SSCCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC--CCEeEEEec-CCCceee
Confidence 3457777788999999988 766666655445556666666666 5566777899999976 444444444 4445555
Q ss_pred E-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCC
Q 028802 87 L-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 87 ~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (203)
+ ..+++.++ .++ +.|..+| .+++.+........ .+.++...++|. |..++.++.|..++..
T Consensus 182 ~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~-l~v~t~~~gl~~~~~~ 243 (330)
T 3hxj_A 182 ASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYW-TVTRPAISEDGT-IYVTSLDGHLYAINPD 243 (330)
T ss_dssp CEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSC-CCSCCEECTTSC-EEEEETTTEEEEECTT
T ss_pred eEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCc-ceeceEECCCCe-EEEEcCCCeEEEECCC
Confidence 5 45666644 444 7799999 77777766655433 577788888875 4556667788888753
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.43 E-value=4e-05 Score=55.38 Aligned_cols=134 Identities=11% Similarity=-0.023 Sum_probs=88.3
Q ss_pred ccCCEEE-EEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-CCCC
Q 028802 5 ADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPN 82 (203)
Q Consensus 5 p~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~ 82 (203)
++++.|+ ....++.+.+||..+.+.+.++...... ..+.+++..|+.+..++.|.++|..+ .+.+..+.. ....
T Consensus 103 ~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~ 178 (268)
T 3nok_A 103 SDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQ 178 (268)
T ss_dssp ECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCC---CCEEEETTEEEEECSSSEEEEECTTT-CCEEEEEECEETTE
T ss_pred EeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCce---eEEecCCCEEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCc
Confidence 3444443 3456899999999999998888753332 23346788888888889999999875 344554432 0222
Q ss_pred c---eeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccC------------CCcceEEEEEeCCCCeEEEEe
Q 028802 83 S---VDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 83 ~---v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~l~~~~ 142 (203)
+ +..+-..+|...+..-....|.+.|..+++.+..+... ...-...|+|+|+++.|++.+
T Consensus 179 ~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 179 PVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 2 23341237755544445788999999999988776432 112468899999876665554
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.38 E-value=9.9e-05 Score=52.73 Aligned_cols=133 Identities=10% Similarity=0.036 Sum_probs=87.8
Q ss_pred cCCEEEE-EcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-CCCCc
Q 028802 6 DAMKLLG-TSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPNS 83 (203)
Q Consensus 6 ~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~ 83 (203)
.++.|+. ...++.+.+||..+.+.+.++.....+ ..+.+++..|+.+..++.|.++|..+. +.+..+.. .+..+
T Consensus 73 ~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~-~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 73 WRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTL-QQVGSIKVTAGGRP 148 (243)
T ss_dssp ETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTC-CEEEEEECEETTEE
T ss_pred eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCC-eEEEEEEEccCCcc
Confidence 3444443 456899999999999998888754332 334467777777777899999998753 44444432 01222
Q ss_pred ---eeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccC------------CCcceEEEEEeCCCCeEEEEe
Q 028802 84 ---VDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 84 ---v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~l~~~~ 142 (203)
+..+-..+|...+..-....|.+.|..+++.+..+... ...-...|+++|++..|++.+
T Consensus 149 ~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 149 LDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 23331236665544445778999999999988776522 112467899999887766665
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.35 E-value=1.2e-05 Score=59.65 Aligned_cols=141 Identities=10% Similarity=-0.010 Sum_probs=88.6
Q ss_pred cccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCc
Q 028802 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNS 83 (203)
Q Consensus 4 sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 83 (203)
.+++.. ..++ +.|..++ .+++...........+.++...+++. |++++.++.+..++.. +..+..+.. ....
T Consensus 185 d~~g~l-~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~--g~~~~~~~~-~~~~ 256 (330)
T 3hxj_A 185 GKDGTI-YFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD--GTEKWRFKT-GKRI 256 (330)
T ss_dssp CTTCCE-EEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT--SCEEEEEEC-SSCC
T ss_pred cCCCEE-EEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC--CCEeEEeeC-CCCc
Confidence 345554 4444 7788999 67766666665555677777777765 4555667778888743 344444443 3333
Q ss_pred eeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 84 VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 84 v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
+..+ ..+++ .|..++.+|.|..+|. +++.+..+... ...+.++...++++ |..++.+|.+++.......
T Consensus 257 ~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~-~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 257 ESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETG-SWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECS-SCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred cccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcC-CccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 3334 34444 5667788888999995 67776666544 32566777777775 5567889999988765443
No 253
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.34 E-value=8e-05 Score=58.05 Aligned_cols=147 Identities=10% Similarity=0.075 Sum_probs=87.3
Q ss_pred Cccccc--CCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCC-----eEEEEEcCCccccc
Q 028802 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG-----TVLLYSWGYFKDCS 73 (203)
Q Consensus 1 l~~sp~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~ 73 (203)
|+|+|+ ...|+.+...+.|+.++..++...... ........++++++++ |+++...+ .+..++.. ....
T Consensus 144 vavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~--~~~~ 219 (433)
T 4hw6_A 144 MMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA--SGFT 219 (433)
T ss_dssp EEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG--GTTC
T ss_pred EEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC--CCee
Confidence 467774 445555544488999998877665443 3445688999999999 44444321 23333322 1111
Q ss_pred --eeeecCCCCceeEE-Eee-CCCEEEEEcCCCcEEEEEccCCceeeee-ccCCCcceEEEEEeCCCCeEEEEe-CCCcE
Q 028802 74 --DRFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPI-AEHSEYPIESLALSHDRKFLGSIS-HDSML 147 (203)
Q Consensus 74 --~~~~~~~~~~v~~~-~~~-~~~~l~~~~~dg~v~v~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i 147 (203)
..+.. ......+ ++| ++.++++-...+.|+.++..++.....+ ..........++|+|++++|+.+. ..+.|
T Consensus 220 ~~~~~~~--~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 220 ERLSLCN--ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CEEEEEE--CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ccccccc--cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 11211 1223334 788 6666556556788999998877652222 222121345799999999665554 56789
Q ss_pred EEEeCC
Q 028802 148 KLWDLD 153 (203)
Q Consensus 148 ~iwd~~ 153 (203)
+.++..
T Consensus 298 ~~~~~d 303 (433)
T 4hw6_A 298 YRVDYN 303 (433)
T ss_dssp EEEEBC
T ss_pred EEEeCC
Confidence 998765
No 254
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.33 E-value=0.00019 Score=51.78 Aligned_cols=153 Identities=8% Similarity=0.055 Sum_probs=97.9
Q ss_pred CcccccCCEEE-EEcCCCeEEEEEcCCCeEEEeecC-CcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc--cceee
Q 028802 1 MTFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDRF 76 (203)
Q Consensus 1 l~~sp~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~ 76 (203)
|+|+|+++.|+ +...++.|...|.. ++.+..+.. .......|++.+++.++++.-.++.+.++++..... .+...
T Consensus 32 la~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 32 LTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred eEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 57888877554 56778899999988 777766642 234577889988887777766678899998864432 11211
Q ss_pred e-----cCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEcc---CCceeeeec-------cCCCcceEEEEEeCCCCeE-E
Q 028802 77 V-----GLSPNSVDAL-LKLDEDRVITGSENGLISLVGIL---PNRIIQPIA-------EHSEYPIESLALSHDRKFL-G 139 (203)
Q Consensus 77 ~-----~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~---~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l-~ 139 (203)
. .......-.+ ++|.++.|+++.......+|.+. ....+..+. .+ -..+.+++++|....| +
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~-~~d~S~l~~dp~tg~lli 189 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT-LDDVSGAEFNQQKNTLLV 189 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC-SSCCCEEEEETTTTEEEE
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc-cCCceeEEEcCCCCeEEE
Confidence 1 0023345677 89999888888876666666654 111122111 11 1257889999965554 4
Q ss_pred EEeCCCcEEEEeCCCc
Q 028802 140 SISHDSMLKLWDLDDI 155 (203)
Q Consensus 140 ~~~~d~~i~iwd~~~~ 155 (203)
....++.|.++|....
T Consensus 190 LS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 190 LSHESRALQEVTLVGE 205 (255)
T ss_dssp EETTTTEEEEECTTCC
T ss_pred EECCCCeEEEEcCCCC
Confidence 5556778888886654
No 255
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.33 E-value=6.3e-05 Score=56.08 Aligned_cols=151 Identities=9% Similarity=0.045 Sum_probs=96.3
Q ss_pred cccccCCEEEEE-cCCCeEEEEEcCCCeEEE-eecC----C--cccEEEEEE---eeCCCEEEEecC-------------
Q 028802 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQT-RSEF----S--EEELTSVVL---MKNGRKVVCGSQ------------- 57 (203)
Q Consensus 2 ~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~-~~~~----~--~~~i~~l~~---~~~~~~l~~~~~------------- 57 (203)
+|++....++.+ -..++|..|+...+.... .+.. . ...+..|.| .|+++++++...
T Consensus 19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence 577655555444 478999999987654332 2322 1 124678999 588777775432
Q ss_pred CCeEEEEEcC---Cccccceeee--cCC---------C-CceeEE-EeeCCCEEEEEcCC-CcEEEEEccCCceeeeec-
Q 028802 58 SGTVLLYSWG---YFKDCSDRFV--GLS---------P-NSVDAL-LKLDEDRVITGSEN-GLISLVGILPNRIIQPIA- 119 (203)
Q Consensus 58 d~~i~v~d~~---~~~~~~~~~~--~~~---------~-~~v~~~-~~~~~~~l~~~~~d-g~v~v~d~~~~~~~~~~~- 119 (203)
+..+..||+. +. +.+.... ... . .....+ ..++|+..++++.. +.|..++.. |+.+..+.
T Consensus 99 ~~~v~~~Dl~~~~tg-~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~ 176 (334)
T 2p9w_A 99 ASSFHSFNLPLSENS-KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAW 176 (334)
T ss_dssp CCEEEEEESSCCTTC-CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEE
T ss_pred CCEEEEEcCCcCCCC-CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeee
Confidence 5779999987 43 3322221 100 1 124555 78999999988887 888777755 33332221
Q ss_pred ----cCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 120 ----EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 120 ----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
.........|+++|+|..|++....+.|..+|+.+
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 11112367899999999888877799999999873
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.32 E-value=0.00041 Score=51.65 Aligned_cols=150 Identities=9% Similarity=-0.048 Sum_probs=90.2
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCC----CeEEEeecCCcccEEEEEEeeCCCEE-EEecCCCeEEEEEcCCccccce
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~ 74 (203)
++|++.++.|+.+ ...+.|+.+++.+ ......+...-.....+++.+.+..| ++-...+.|.++++.. ....
T Consensus 35 ~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g--~~~~ 112 (316)
T 1ijq_A 35 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK 112 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--SSEE
T ss_pred EEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC--CceE
Confidence 3577766555444 4568899998875 22222232222345788998755544 4545678999999862 3333
Q ss_pred ee-ecCCCCceeEE-EeeCCCEEEEEcCC--CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEE
Q 028802 75 RF-VGLSPNSVDAL-LKLDEDRVITGSEN--GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKL 149 (203)
Q Consensus 75 ~~-~~~~~~~v~~~-~~~~~~~l~~~~~d--g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i 149 (203)
.+ .. .......+ ++|.+..|+.+... +.|..+++. |.....+....-.....++++|++..|+.+. ..+.|..
T Consensus 113 ~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~ 190 (316)
T 1ijq_A 113 TLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 190 (316)
T ss_dssp EEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEE
Confidence 33 32 33456777 78877766655542 678888875 3333333211122578899999877776555 5678999
Q ss_pred EeCCC
Q 028802 150 WDLDD 154 (203)
Q Consensus 150 wd~~~ 154 (203)
+++..
T Consensus 191 ~d~dg 195 (316)
T 1ijq_A 191 IDVNG 195 (316)
T ss_dssp EETTS
T ss_pred EecCC
Confidence 99875
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.31 E-value=5e-05 Score=61.32 Aligned_cols=136 Identities=13% Similarity=0.001 Sum_probs=87.5
Q ss_pred eEEEEEcCCCeEEEeecCC----------cccEEEEEEeeCCC---EEEEecCCCeEEEEEcCCccccceeeecCCC---
Q 028802 18 TLSVCNLRKNTVQTRSEFS----------EEELTSVVLMKNGR---KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP--- 81 (203)
Q Consensus 18 ~i~v~d~~~~~~~~~~~~~----------~~~i~~l~~~~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~--- 81 (203)
.|..+|..+++.+..++.. ..++. +....+|+ .++.++.+|.++++|..+. +.+..+.. ..
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~~w~~~~-~~~~~ 349 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENG-NLIVAEKV-DPAVN 349 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTC-CEEEEEES-STTCC
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCC-CEEeeecc-cCCcc
Confidence 6999999999988777532 12221 23334674 5677888999999998753 43332221 10
Q ss_pred ----------Cce--------------------------eEE-EeeCCCEEEEEc-------------------------
Q 028802 82 ----------NSV--------------------------DAL-LKLDEDRVITGS------------------------- 99 (203)
Q Consensus 82 ----------~~v--------------------------~~~-~~~~~~~l~~~~------------------------- 99 (203)
.++ ..+ ++|+..++++.+
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 011 122 566666666543
Q ss_pred ------------CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 100 ------------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 100 ------------~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
..+.|..||+.+++.+..+.... .+....+...+..++.++.|+.|+.||.++++..
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCCC--CccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 34789999999999887775442 2333333445667777889999999999988754
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.31 E-value=5e-05 Score=56.55 Aligned_cols=134 Identities=13% Similarity=0.033 Sum_probs=80.5
Q ss_pred CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEe-cCCCeEEEEEcCCcc-ccceeeecCCCCceeEE-EeeCCC
Q 028802 17 GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFK-DCSDRFVGLSPNSVDAL-LKLDED 93 (203)
Q Consensus 17 ~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~-~~d~~i~v~d~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~ 93 (203)
+.|..|+..+++....... ......|+|+|+++.|+++ ...+.|.+|++.... .....+.. ..+ ...+ +.++|+
T Consensus 165 g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSC
T ss_pred ceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCC
Confidence 6688888766654322211 2234578999999866655 556899999986321 11122222 223 5666 788998
Q ss_pred EEEEEcC----------CCcEEEEEccCCceeeeeccCCC---cceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 94 RVITGSE----------NGLISLVGILPNRIIQPIAEHSE---YPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 94 ~l~~~~~----------dg~v~v~d~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
++++... .+.|..+|. .++.+..+....+ ..++.+++ .+++.+++....+.|.++++...
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred EEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 7666544 456888886 4676666654321 14666666 45555555557888999998643
No 259
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.00013 Score=57.61 Aligned_cols=150 Identities=7% Similarity=0.074 Sum_probs=90.3
Q ss_pred Ccccc-cCCEEEEEc-CCCeEEEEEcCCCeEEEeecCC---cccEEEEEE-------eeCCCEEEEecCCC-------eE
Q 028802 1 MTFAA-DAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFS---EEELTSVVL-------MKNGRKVVCGSQSG-------TV 61 (203)
Q Consensus 1 l~~sp-~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~---~~~i~~l~~-------~~~~~~l~~~~~d~-------~i 61 (203)
|+|+| ++..|+++. ..+.|+++|+.++.+...+... ......|+| ++++..|+++...+ .+
T Consensus 144 la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 144 LAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred EEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 46788 355555544 3467999999887665544332 235889999 99999777766543 25
Q ss_pred EEEEcCCccccc-----eeeecCCCCceeEE-EeeC-CCEEEEEcCCCcEEEEEcc-------CCce-----------ee
Q 028802 62 LLYSWGYFKDCS-----DRFVGLSPNSVDAL-LKLD-EDRVITGSENGLISLVGIL-------PNRI-----------IQ 116 (203)
Q Consensus 62 ~v~d~~~~~~~~-----~~~~~~~~~~v~~~-~~~~-~~~l~~~~~dg~v~v~d~~-------~~~~-----------~~ 116 (203)
.+++....+... ..+.. ...+ ..+ .+|+ +.++++-...+.|..+|+. ++.. ..
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~-~~~p-~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~ 301 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAA-YKQC-NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFK 301 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEE-ESCC-CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEE
T ss_pred EEEecCCCCceeecccceeecc-CCCc-eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccc
Confidence 666533212221 22222 2222 334 7885 4545555667889999987 4543 11
Q ss_pred e-eccCCCcceEEEEEeCCCCeEEEE-eCCCcEEEEeC
Q 028802 117 P-IAEHSEYPIESLALSHDRKFLGSI-SHDSMLKLWDL 152 (203)
Q Consensus 117 ~-~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iwd~ 152 (203)
. +........+.|+|+|+|++|+.+ .....|+.++.
T Consensus 302 ~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 302 QLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 1 222212246789999999965544 46678888664
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.26 E-value=4.2e-05 Score=61.76 Aligned_cols=128 Identities=10% Similarity=-0.029 Sum_probs=83.0
Q ss_pred EEEEEcCCCeEEEEEcCCCeEEEeecCCc-------------ccE--------------------------EEEEEeeCC
Q 028802 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSE-------------EEL--------------------------TSVVLMKNG 49 (203)
Q Consensus 9 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------------~~i--------------------------~~l~~~~~~ 49 (203)
.++.++.+|.++++|..+++.+....... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 56778889999999999998876654221 111 235678877
Q ss_pred CEEEEec-------------------------------------CCCeEEEEEcCCccccceeeecCCCCceeEE-EeeC
Q 028802 50 RKVVCGS-------------------------------------QSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLD 91 (203)
Q Consensus 50 ~~l~~~~-------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~~ 91 (203)
.+|++.. ..+.|..||..+. +.+-.+.. ...+... +...
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG-~~~W~~~~--~~~~~~~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTG-KAKWTKWE--KFAAWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTC-CEEEEEEE--SSCCCSBCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCC-CEEEEecC--CCCccceeEEEC
Confidence 7776643 2467888888753 44333332 2222222 4445
Q ss_pred CCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEE
Q 028802 92 EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLG 139 (203)
Q Consensus 92 ~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (203)
+..+++++.++.|+++|..+++.+..+.......-.-+.+..+|+.++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 677888999999999999999999888755321112244557776544
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.23 E-value=0.00037 Score=51.51 Aligned_cols=148 Identities=16% Similarity=0.127 Sum_probs=85.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC--CeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS--GTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~ 78 (203)
++|+|+++++++-...+.|..|+.... ....+.. ...+..+++.++++++++.... ..|..++... +.. ..+..
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~-g~~-~~~~~ 112 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD-GTV-ETLLT 112 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT-SCE-EEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC-CeE-EEEEe
Confidence 468899887777667889999997754 3333322 3568899999999966654332 2466666543 232 22221
Q ss_pred C-CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCce-eeee-------cc-CCCcceEEEEEeCCCCeEEEEe-CCCc
Q 028802 79 L-SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI-IQPI-------AE-HSEYPIESLALSHDRKFLGSIS-HDSM 146 (203)
Q Consensus 79 ~-~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~-~~~~-------~~-~~~~~i~~~~~~~~~~~l~~~~-~d~~ 146 (203)
. .......+ ..+.+..+++-...+.|+++|...+.. +... .. ..-.....+ +|++.+|+.+. ..+.
T Consensus 113 ~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~ 190 (306)
T 2p4o_A 113 LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKML 190 (306)
T ss_dssp CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTE
T ss_pred CCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCE
Confidence 0 11112233 334444444444588899999765421 1100 00 101134445 88887766554 6788
Q ss_pred EEEEeCCC
Q 028802 147 LKLWDLDD 154 (203)
Q Consensus 147 i~iwd~~~ 154 (203)
|.+|++..
T Consensus 191 I~~~~~~~ 198 (306)
T 2p4o_A 191 LLRIPVDS 198 (306)
T ss_dssp EEEEEBCT
T ss_pred EEEEEeCC
Confidence 99999875
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.22 E-value=0.00057 Score=51.62 Aligned_cols=151 Identities=12% Similarity=0.019 Sum_probs=91.3
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEE-EEecCCCeEEEEEcCCccccceeee-
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFV- 77 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~- 77 (203)
|+|++..+.|+.+ ...+.|+.+++........+.........+++.+.+..| ++-...+.|.++++.. .....+.
T Consensus 78 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--~~~~~l~~ 155 (349)
T 3v64_C 78 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--AHRKVLLW 155 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEC
T ss_pred EEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC--CceEEEEe
Confidence 3566655555443 456778888877654333333223345678888755544 5555578899999863 3333332
Q ss_pred cCCCCceeEE-EeeCCCEEEEEcC-C-CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCC
Q 028802 78 GLSPNSVDAL-LKLDEDRVITGSE-N-GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~-d-g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (203)
. .......+ ++|.+..|+.... . +.|..+++.. .....+..........++++|++..|+.+. ..+.|..+++.
T Consensus 156 ~-~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 156 Q-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp T-TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 2 33456777 7886666665543 4 6788888763 333333221122578899999777766554 56789999987
Q ss_pred Cc
Q 028802 154 DI 155 (203)
Q Consensus 154 ~~ 155 (203)
..
T Consensus 234 G~ 235 (349)
T 3v64_C 234 GS 235 (349)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 263
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.21 E-value=0.00038 Score=50.21 Aligned_cols=150 Identities=9% Similarity=0.105 Sum_probs=91.1
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe---EEEeec------CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCC--c
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---VQTRSE------FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY--F 69 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~---~~~~~~------~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~--~ 69 (203)
|++.+++.++++.-.++.+.++.+.... .+.... ........|+|+|.++.|+++.......+|.+.. .
T Consensus 75 Ia~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~ 154 (255)
T 3qqz_A 75 IEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS 154 (255)
T ss_dssp EEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC
T ss_pred eEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc
Confidence 3566777766666667889999876432 122221 1234568999999998888777665555655531 1
Q ss_pred cccceeee------cCCCCceeEE-EeeC-CCEEEEEcCCCcEEEEEccCCceeeeeccCCC--------cceEEEEEeC
Q 028802 70 KDCSDRFV------GLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHSE--------YPIESLALSH 133 (203)
Q Consensus 70 ~~~~~~~~------~~~~~~v~~~-~~~~-~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~--------~~i~~~~~~~ 133 (203)
...+..+. ......+..+ ++|. +++++.+.....|.++|.. ++.+..+....+ .....|+|.+
T Consensus 155 ~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 155 SNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp SSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred CCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC
Confidence 11122211 0022346777 7875 4556666677888899965 556555433311 1568999999
Q ss_pred CCCeEEEEeCCCcEEEEeC
Q 028802 134 DRKFLGSISHDSMLKLWDL 152 (203)
Q Consensus 134 ~~~~l~~~~~d~~i~iwd~ 152 (203)
+|+..++ +.-..+++|.-
T Consensus 234 ~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 234 SGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TCCEEEE-ETTTEEEEEEC
T ss_pred CCCEEEE-cCCceEEEEEe
Confidence 9975444 66666776653
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.19 E-value=9.3e-05 Score=59.88 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=40.8
Q ss_pred CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 101 NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 101 dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
.|.|..||+.+++.+....... ++..-.+...+..++.++.|+.|+.||.++++..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 5789999999999887775442 2222222334667778899999999999988754
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.18 E-value=0.00025 Score=59.12 Aligned_cols=149 Identities=9% Similarity=0.018 Sum_probs=81.3
Q ss_pred CcccccCCEEEEEcCC-----CeEEEEEcCCCeE--EEeec-CCcccEEEEEEeeCCCEEEEecC---CCeEEEEEcCCc
Q 028802 1 MTFAADAMKLLGTSGD-----GTLSVCNLRKNTV--QTRSE-FSEEELTSVVLMKNGRKVVCGSQ---SGTVLLYSWGYF 69 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d-----~~i~v~d~~~~~~--~~~~~-~~~~~i~~l~~~~~~~~l~~~~~---d~~i~v~d~~~~ 69 (203)
++|+|||+.|+....+ ..|+++++.++.. ...+. ........+.|+|||++|+..+. ...|+++|+...
T Consensus 226 ~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 4799999988777654 3688888876531 12222 22334668899999998876553 346888888643
Q ss_pred cccc--eeeecCCCCceeEE-EeeCCCEEEEEcC-C----CcEEEEEccCC-ceee-eeccCCCcceEEEEEeCCCCeE-
Q 028802 70 KDCS--DRFVGLSPNSVDAL-LKLDEDRVITGSE-N----GLISLVGILPN-RIIQ-PIAEHSEYPIESLALSHDRKFL- 138 (203)
Q Consensus 70 ~~~~--~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d----g~v~v~d~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~l- 138 (203)
.... ..+..........+ |+ .+..|+..+. + ..|.++++.++ .... .+.......+..+.+ .+.+|
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv 382 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMH-GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLV 382 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEE-TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEE
T ss_pred CCCceeEEeecCCCCceEEEeee-eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEE
Confidence 1122 33332022333333 22 3666655443 2 25777777642 2222 232221213444444 45555
Q ss_pred EEEeCCCc--EEEEeC
Q 028802 139 GSISHDSM--LKLWDL 152 (203)
Q Consensus 139 ~~~~~d~~--i~iwd~ 152 (203)
++...++. |.++++
T Consensus 383 ~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 383 VAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EEEEeCCEEEEEEEec
Confidence 45556665 555564
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.18 E-value=0.001 Score=51.20 Aligned_cols=151 Identities=10% Similarity=-0.057 Sum_probs=90.6
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCCC----eEEEeecCCcccEEEEEEeeCC-CEEEEecCCCeEEEEEcCCccccce
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~~----~~~~~~~~~~~~i~~l~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~ 74 (203)
|+|++..+.|+.+ ...+.|+.+++... .....+.........|++.+.+ +++++-...+.|.+.++.. ....
T Consensus 117 l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g--~~~~ 194 (400)
T 3p5b_L 117 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK 194 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT--CSEE
T ss_pred EeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC--CceE
Confidence 3566655555444 34577777777642 1222333334557789998844 4445555678899988763 3333
Q ss_pred e-eecCCCCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEE
Q 028802 75 R-FVGLSPNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKL 149 (203)
Q Consensus 75 ~-~~~~~~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i 149 (203)
. +.. .......+ ++|.+..|+.... .+.|...++........+... -.....|++++++..|+.+. ..+.|..
T Consensus 195 ~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~-l~~P~glavd~~~~~lY~aD~~~~~I~~ 272 (400)
T 3p5b_L 195 TLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISS 272 (400)
T ss_dssp EEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC-CCceEEEEEEeCCCEEEEEECCCCEEEE
Confidence 3 332 33446777 7887776666553 367888887643322222222 12578999999887776665 5678999
Q ss_pred EeCCCc
Q 028802 150 WDLDDI 155 (203)
Q Consensus 150 wd~~~~ 155 (203)
+|+...
T Consensus 273 ~d~dG~ 278 (400)
T 3p5b_L 273 IDVNGG 278 (400)
T ss_dssp EETTSC
T ss_pred EeCCCC
Confidence 998654
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.17 E-value=0.00043 Score=53.08 Aligned_cols=152 Identities=11% Similarity=-0.002 Sum_probs=91.1
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEE-EEecCCCeEEEEEcCCccccceeeec
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~ 78 (203)
|+|++.++.|+.+ ...+.|+.+++........+.........+++.+.+..| ++-...+.|.++++.. .....+..
T Consensus 121 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg--~~~~~l~~ 198 (386)
T 3v65_B 121 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--AHRKVLLW 198 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS--CSCEEEEC
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC--CceEEeec
Confidence 3567655555443 456788888877654433333323345678888755554 4445567888888752 33333322
Q ss_pred CCCCceeEE-EeeCCCEEEEEcC-C-CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCCC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGSE-N-GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDD 154 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~-d-g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 154 (203)
........+ ++|.+..|+.... . +.|..+++............ ......++|+|++..|+.+. ..+.|..+++..
T Consensus 199 ~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 199 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 033456777 7887776666554 3 67888887643222222222 22578899998777666554 567899999865
Q ss_pred c
Q 028802 155 I 155 (203)
Q Consensus 155 ~ 155 (203)
.
T Consensus 278 ~ 278 (386)
T 3v65_B 278 S 278 (386)
T ss_dssp C
T ss_pred C
Confidence 3
No 268
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.13 E-value=0.00022 Score=57.87 Aligned_cols=56 Identities=14% Similarity=-0.051 Sum_probs=39.7
Q ss_pred CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 101 NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 101 dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
.|.|..||+.+++.+....... +...-.+...+..++.++.|+.|+.||.++++..
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCeEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 4779999999999887765331 2222223335667777889999999999988754
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.11 E-value=9.2e-05 Score=59.90 Aligned_cols=81 Identities=14% Similarity=0.094 Sum_probs=51.7
Q ss_pred CCeEEEEEcCCccccceeeecCCCCceeE-EEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC
Q 028802 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVDA-LLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK 136 (203)
Q Consensus 58 d~~i~v~d~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (203)
.|.|..||+.+. +.+-.... .. +... .....+.+++.++.|+.|+.||.++|+.+..+.........-+.|..+|+
T Consensus 465 ~G~l~A~D~~tG-~~~W~~~~-~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 465 VGSLRAMDPVSG-KVVWEHKE-HL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp SEEEEEECTTTC-CEEEEEEE-SS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEEECCCC-CEEEEecC-CC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 577888888754 33333332 21 2221 13445778888999999999999999999888765431122366777886
Q ss_pred -eEEEE
Q 028802 137 -FLGSI 141 (203)
Q Consensus 137 -~l~~~ 141 (203)
|+++.
T Consensus 542 qYv~~~ 547 (582)
T 1flg_A 542 QYLGVT 547 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 44433
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.07 E-value=0.00016 Score=59.53 Aligned_cols=150 Identities=18% Similarity=0.158 Sum_probs=95.7
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCc----ccEEE-EEEeeCCCEEEEecC------CCeEEEEEcCCccccce
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE----EELTS-VVLMKNGRKVVCGSQ------SGTVLLYSWGYFKDCSD 74 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~----~~i~~-l~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~ 74 (203)
.+..|++++.++.|..+|..+|+.+..+.... ..+.+ ..+ .+ ..++++.. ++.|+.+|..+. +.+-
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~-~~v~vg~~~~~~~~~g~v~a~D~~tG-~~~W 192 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VK-GKVIIGNGGAEYGVRGFVSAYDADTG-KLAW 192 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ET-TEEEECCBCTTTCCBCEEEEEETTTC-CEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-EC-CEEEEeCCCCCcCCCCEEEEEECCCC-cEEE
Confidence 35678888889999999999999887765421 11111 111 13 35555543 588999998764 4333
Q ss_pred eeecC--CC---------------------------Cce-eEE-EeeCCCEEEEEcCCC-------------------cE
Q 028802 75 RFVGL--SP---------------------------NSV-DAL-LKLDEDRVITGSENG-------------------LI 104 (203)
Q Consensus 75 ~~~~~--~~---------------------------~~v-~~~-~~~~~~~l~~~~~dg-------------------~v 104 (203)
.+... .. ..+ ..+ +.|...+++.++.++ .|
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 33210 00 011 123 677888888887765 39
Q ss_pred EEEEccCCceeeeeccCC-C-------cceEEEEEeCCCC---eEEEEeCCCcEEEEeCCCcccC
Q 028802 105 SLVGILPNRIIQPIAEHS-E-------YPIESLALSHDRK---FLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 105 ~v~d~~~~~~~~~~~~~~-~-------~~i~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
..+|..+|+.+..++... . .++....+..+|+ .|+.++.+|.++++|..+++..
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 999999999987775421 1 1233333444665 6888889999999999988754
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.04 E-value=0.0019 Score=48.67 Aligned_cols=143 Identities=13% Similarity=0.160 Sum_probs=92.6
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeC----CC---EEEEecC---CCeEEEEEcCCcccccee
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKN----GR---KVVCGSQ---SGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~----~~---~l~~~~~---d~~i~v~d~~~~~~~~~~ 75 (203)
...+++.....+-|.+||+ +|+.++.+.. +.++.+..-|+ ++ +++++.. +++|.+|++......+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3455666667789999999 7888888764 55777776663 22 2333333 578999988422223333
Q ss_pred eecC------CCCceeEE--E-eeC-CC-EEEEEcCCCcEEEEEcc-------CCceeeeeccCCCcceEEEEEeCCCCe
Q 028802 76 FVGL------SPNSVDAL--L-KLD-ED-RVITGSENGLISLVGIL-------PNRIIQPIAEHSEYPIESLALSHDRKF 137 (203)
Q Consensus 76 ~~~~------~~~~v~~~--~-~~~-~~-~l~~~~~dg~v~v~d~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~ 137 (203)
+... ....+..+ + +|. +. ++++...+|.+..|.+. +++.+.++.... .+..++..+...+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~EgcvvDd~~g~ 193 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAADDEYGR 193 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEEETTTTE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEEcCCCCe
Confidence 3110 11233333 3 564 44 57777788999999883 335566676653 6889999998899
Q ss_pred EEEEeCCCcEEEEeCC
Q 028802 138 LGSISHDSMLKLWDLD 153 (203)
Q Consensus 138 l~~~~~d~~i~iwd~~ 153 (203)
|+.+-.+..|..++.+
T Consensus 194 Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEETTTEEEEEECS
T ss_pred EEEecccceEEEEeCC
Confidence 9999988777777754
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.98 E-value=0.00039 Score=56.40 Aligned_cols=130 Identities=10% Similarity=0.046 Sum_probs=80.6
Q ss_pred CEEEEEcCCCeEEEEEcCCCeEEEeecCCc-------------ccE--------------------------EEEEEeeC
Q 028802 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-------------EEL--------------------------TSVVLMKN 48 (203)
Q Consensus 8 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-------------~~i--------------------------~~l~~~~~ 48 (203)
..++.++.+|.++++|..+++++....... .++ ..++++|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 456778899999999999998876553211 111 13566666
Q ss_pred CCEEEEec---------------------------------------CCCeEEEEEcCCccccceeeecCCCCcee-EEE
Q 028802 49 GRKVVCGS---------------------------------------QSGTVLLYSWGYFKDCSDRFVGLSPNSVD-ALL 88 (203)
Q Consensus 49 ~~~l~~~~---------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~-~~~ 88 (203)
..++++.. ..|.|..||+.+. +.+-.... ..+.. ...
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG-~~~W~~~~--~~~~~~g~~ 480 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITG-DYKWEKME--RFAVWGGTM 480 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTC-CEEEEEEE--SSCCCSBCE
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCC-CEEeEecC--CCCccCcce
Confidence 66554421 2366777777653 33222221 11111 113
Q ss_pred eeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC-eEEE
Q 028802 89 KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGS 140 (203)
Q Consensus 89 ~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~ 140 (203)
...+.+++.++.++.|+.||.++|+.+..++........-+.+..+|+ |+++
T Consensus 481 ~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 481 ATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEE
Confidence 446778888999999999999999999888655332223356667876 4443
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.97 E-value=0.0026 Score=47.44 Aligned_cols=149 Identities=10% Similarity=-0.029 Sum_probs=87.2
Q ss_pred cccccCCEEEE-EcCCCeEEEEEcCCCeEE-EeecCCcccEEEEEEeeCCC-EEEEecCCCeEEEEEcCCccccceeee-
Q 028802 2 TFAADAMKLLG-TSGDGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRFV- 77 (203)
Q Consensus 2 ~~sp~~~~l~~-~~~d~~i~v~d~~~~~~~-~~~~~~~~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~- 77 (203)
+|++..+.|+. -...+.|+.+++..+... ..+...-.....+++.+.+. ++++-...+.|.++++.. .....+.
T Consensus 41 d~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--~~~~~l~~ 118 (318)
T 3sov_A 41 DFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG--SLRKVLFW 118 (318)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEC
T ss_pred EEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC--CcEEEEEe
Confidence 46665444433 344567777776654211 11111123455788887554 445555678899999863 3333332
Q ss_pred cCCCCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCC
Q 028802 78 GLSPNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (203)
. .......+ +.|.+..|+.... .+.|..+++. |.....+....-.....++++|++..|+.+. ..+.|..+++.
T Consensus 119 ~-~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 119 Q-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp S-SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 3 34456777 7887666666653 5778888875 3333233211122568899999777766554 56789999987
Q ss_pred C
Q 028802 154 D 154 (203)
Q Consensus 154 ~ 154 (203)
.
T Consensus 197 G 197 (318)
T 3sov_A 197 G 197 (318)
T ss_dssp S
T ss_pred C
Confidence 5
No 274
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.95 E-value=0.001 Score=52.61 Aligned_cols=156 Identities=11% Similarity=0.047 Sum_probs=89.4
Q ss_pred CcccccCC-EEEEEcCCCeEEEEEcC-------CCeE-----------EEe-ec-CCcccEEEEEEeeCCCEEEEe-cCC
Q 028802 1 MTFAADAM-KLLGTSGDGTLSVCNLR-------KNTV-----------QTR-SE-FSEEELTSVVLMKNGRKVVCG-SQS 58 (203)
Q Consensus 1 l~~sp~~~-~l~~~~~d~~i~v~d~~-------~~~~-----------~~~-~~-~~~~~i~~l~~~~~~~~l~~~-~~d 58 (203)
++++|++. ++++-..++.|..+|+. ++.. ... +. ........|+|+|+++.|+.+ ...
T Consensus 252 iavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~ 331 (496)
T 3kya_A 252 ATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINN 331 (496)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred EEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCC
Confidence 35677444 45555677889999987 4432 111 11 223446789999999965544 457
Q ss_pred CeEEEEEcCCccccc---eeeecCC---C------------Ccee-EEE-e-------eCCCEEEEEcCCCcEEEEEccC
Q 028802 59 GTVLLYSWGYFKDCS---DRFVGLS---P------------NSVD-ALL-K-------LDEDRVITGSENGLISLVGILP 111 (203)
Q Consensus 59 ~~i~v~d~~~~~~~~---~~~~~~~---~------------~~v~-~~~-~-------~~~~~l~~~~~dg~v~v~d~~~ 111 (203)
+.|+.++.......+ ..+.+ . . .... .++ . +.+.++++-...+.|+.++ .+
T Consensus 332 h~I~kid~dg~~~~~~~~~~~aG-~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~ 409 (496)
T 3kya_A 332 HYFMRSDYDEIKKEFITPYNFVG-GYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PE 409 (496)
T ss_dssp TEEEEEEEETTTTEECCCEEEEE-BTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TT
T ss_pred CEEEEEecCCCcceecccEEecC-CCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CC
Confidence 788887764211111 12221 1 0 1123 333 3 4556666666678899998 44
Q ss_pred CceeeeeccC--------------CC---------cceEEEEEeCC-CCeEEEEeCCCcEEEEeCCCcccCC
Q 028802 112 NRIIQPIAEH--------------SE---------YPIESLALSHD-RKFLGSISHDSMLKLWDLDDILKGS 159 (203)
Q Consensus 112 ~~~~~~~~~~--------------~~---------~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (203)
|. +.++.+. .. .....|+++++ +..+++-.....|+.+++.....-+
T Consensus 410 G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 410 GI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp CB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred CC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 53 3333221 00 13678999997 6666666678889999986655443
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.95 E-value=0.003 Score=47.65 Aligned_cols=151 Identities=11% Similarity=-0.044 Sum_probs=87.8
Q ss_pred cccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC-C-CeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-S-GTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~~~ 78 (203)
++.+.+..| ++-...+.|.+.++........+...-.....+++.|.+..|+.+.. . +.|..+++. +.....+..
T Consensus 122 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 199 (349)
T 3v64_C 122 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRIIAD 199 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEESCC
T ss_pred EEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC--CCCcEEEEE
Confidence 455544444 44445677888887654333333333455789999996666555443 4 778888875 233333321
Q ss_pred CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
........+ ++|++..|+.+. ..+.|..+++........+... ......+++ ..+..+++-...+.|..++..++.
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC-CCCceEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 023445677 898777776665 4678999997643322223222 224677887 344445555567888888854443
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.94 E-value=0.002 Score=49.29 Aligned_cols=151 Identities=11% Similarity=-0.044 Sum_probs=87.4
Q ss_pred cccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC-C-CeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-S-GTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~-d-~~i~v~d~~~~~~~~~~~~~ 78 (203)
++++.+..| ++-...+.|.+.++........+...-.....|++.|.+..|+.+.. . +.|..+++. +.....+..
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 242 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRIIAD 242 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC--CCCcEEEEE
Confidence 455544444 33344567777776544332233333356789999987766665543 3 678888875 333333322
Q ss_pred CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
........+ ++|++..|+.+. ..+.|..+++........+... ......+++ ..+..+++....+.|..++..++.
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC-CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCc
Confidence 033445677 888777666654 4677999997643332223222 224677888 344455555577888888854543
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.93 E-value=0.0013 Score=51.29 Aligned_cols=150 Identities=7% Similarity=-0.014 Sum_probs=88.2
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCeEEEee-c-CCcccEEEEEEeeCCCEEEEe-cCCCeEEEEEcCCcccc---c
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRS-E-FSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDC---S 73 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~-~~~~~i~~l~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~---~ 73 (203)
++++| +|.++++-..++.|+.++..++.....+ . +.......|+|+|+++.|+++ ...+.|..+++...... .
T Consensus 233 iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~ 312 (433)
T 4hw6_A 233 CAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVP 312 (433)
T ss_dssp CEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCC
T ss_pred EEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcE
Confidence 46778 5665555556788999998866552222 1 112223469999999855554 45688999886521111 1
Q ss_pred eeeecCC---------------CCceeEE-E---------eeCCCEEEEEcCCCcEEEEEccCCceeeeeccCC------
Q 028802 74 DRFVGLS---------------PNSVDAL-L---------KLDEDRVITGSENGLISLVGILPNRIIQPIAEHS------ 122 (203)
Q Consensus 74 ~~~~~~~---------------~~~v~~~-~---------~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~------ 122 (203)
..+.+ . -.....+ + .+++.++++-...+.|+.++. +|... ++.+..
T Consensus 313 ~~~ag-~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G 389 (433)
T 4hw6_A 313 YIVCG-QHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWG 389 (433)
T ss_dssp EEEEE-CTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSC
T ss_pred EEEEe-cCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccc
Confidence 12211 1 1123445 5 456666666666778988884 45333 222110
Q ss_pred -----------CcceEEEEEe-CCCCeEEEEeCCCcEEEEeCC
Q 028802 123 -----------EYPIESLALS-HDRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 123 -----------~~~i~~~~~~-~~~~~l~~~~~d~~i~iwd~~ 153 (203)
-.....|+++ ++|..+++-.....|+.++++
T Consensus 390 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 390 YVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 0136789999 566666666677888888764
No 278
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.93 E-value=0.0022 Score=47.23 Aligned_cols=130 Identities=8% Similarity=0.011 Sum_probs=77.3
Q ss_pred EEEEEcCCCeEEEEEcCCCeE-EEee---------cCCcccEEEEEEeeCCCEEEEec-CCCeEEEEEcCCcccc--cee
Q 028802 9 KLLGTSGDGTLSVCNLRKNTV-QTRS---------EFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDC--SDR 75 (203)
Q Consensus 9 ~l~~~~~d~~i~v~d~~~~~~-~~~~---------~~~~~~i~~l~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~--~~~ 75 (203)
.+++-...+.|+++|..++.. +... ...-.....| +|++..|+++. ..+.|.+|++...+.. ...
T Consensus 130 ~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~ 207 (306)
T 2p4o_A 130 YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEI 207 (306)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEE
T ss_pred EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEE
Confidence 344444578899998775421 1100 0111234555 88887665554 5789999998632221 122
Q ss_pred eecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceee--eeccCCCcceEEEEEe---CCCCeEEEEeCC
Q 028802 76 FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQ--PIAEHSEYPIESLALS---HDRKFLGSISHD 144 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~--~~~~~~~~~i~~~~~~---~~~~~l~~~~~d 144 (203)
+.. ......+ ++++|+++++....+.|.+++.. ++... .+..... ..++++|. |++..|+..+..
T Consensus 208 ~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~-~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 208 FVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVI-GSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCT-TEEEEEECCSTTTTTEEEEEECT
T ss_pred Eec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccC-CceEEEEecccCCCCEEEEECCC
Confidence 221 1234455 78999877776667889999975 65532 3333312 57899998 888877766543
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.88 E-value=0.0048 Score=51.75 Aligned_cols=151 Identities=9% Similarity=-0.052 Sum_probs=88.2
Q ss_pred cccccCCEEE-EEcCCCeEEEEEcCCC----eEEEeecCCcccEEEEEEeeCCCEEE-EecCCCeEEEEEcCCcccccee
Q 028802 2 TFAADAMKLL-GTSGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDR 75 (203)
Q Consensus 2 ~~sp~~~~l~-~~~~d~~i~v~d~~~~----~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~ 75 (203)
+|++....|+ +-...+.|+.+++... .....+.........|++.+.+..|+ +-...+.|.+.++.. .....
T Consensus 430 ~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG--~~~~~ 507 (791)
T 3m0c_C 430 DTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRKT 507 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--SSEEE
T ss_pred eecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC--CeEEE
Confidence 4555444443 3344566777776542 12222332334566889988775555 445578999999863 33333
Q ss_pred eecCCCCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEe
Q 028802 76 FVGLSPNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWD 151 (203)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd 151 (203)
+..........| +.|....|+.... .+.|.+.++........+... ......|++++.+..|+.+. ....|..++
T Consensus 508 l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 508 LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISSID 586 (791)
T ss_dssp EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC-CCCceEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 332034456777 7887666666653 267888887643333233322 23678999998777766554 556788888
Q ss_pred CCCc
Q 028802 152 LDDI 155 (203)
Q Consensus 152 ~~~~ 155 (203)
+...
T Consensus 587 ~dG~ 590 (791)
T 3m0c_C 587 VNGG 590 (791)
T ss_dssp TTSC
T ss_pred cCCC
Confidence 8654
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.79 E-value=0.0055 Score=45.63 Aligned_cols=152 Identities=9% Similarity=-0.090 Sum_probs=88.8
Q ss_pred cccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC--CCeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++.+.+..| ++-...+.|.++++........+.........+++.|.+..|+.+.. .+.|..+++. +.....+..
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 162 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFIIIN 162 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CCCeEEEEE
Confidence 445433333 34345577888887654322223333456789999997666666553 5778888875 333333322
Q ss_pred CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
..-.....+ ++|++..|+.+. ..+.|..+++........+... ......+++.. +..+++-...+.|..++..++.
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC-CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC-CCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 023445677 898777777665 4678999998643222222222 22466777753 3444555567889999986664
Q ss_pred c
Q 028802 157 K 157 (203)
Q Consensus 157 ~ 157 (203)
.
T Consensus 241 ~ 241 (318)
T 3sov_A 241 G 241 (318)
T ss_dssp S
T ss_pred c
Confidence 3
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.76 E-value=0.0033 Score=48.90 Aligned_cols=151 Identities=9% Similarity=0.046 Sum_probs=85.9
Q ss_pred Ccccc-cCCEEEEEcCCCeEEEEEcCCCeEEEeec-CCcccEEEEEEeeCCCEEEE-ecCCCeEEEEEcCCcccc---ce
Q 028802 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYFKDC---SD 74 (203)
Q Consensus 1 l~~sp-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~---~~ 74 (203)
++++| ++.++++-...+.|+.++..++....... ........|+|+|++++|++ -...+.|..++....... ..
T Consensus 231 iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~ 310 (430)
T 3tc9_A 231 AETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPY 310 (430)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCE
T ss_pred EEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceE
Confidence 35788 66666666677899999988765422222 12245678999999995554 456788999887521111 11
Q ss_pred eeecCC---------------CCcee-EEE-e--------eCCCEEEEEcCCCcEEEEEccCCceeeeecc----CC---
Q 028802 75 RFVGLS---------------PNSVD-ALL-K--------LDEDRVITGSENGLISLVGILPNRIIQPIAE----HS--- 122 (203)
Q Consensus 75 ~~~~~~---------------~~~v~-~~~-~--------~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~----~~--- 122 (203)
.+.+ . -.... .++ . +++.++++-...+.|+.++ ..|......-. ..
T Consensus 311 ~~ag-~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~ 388 (430)
T 3tc9_A 311 IVCG-QQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYN 388 (430)
T ss_dssp EEEE-CTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCB
T ss_pred EEec-cCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCccc
Confidence 2221 1 00112 232 2 2345555545567788887 34543322211 00
Q ss_pred C---------cceEEEEEeCC-CCeEEEEeCCCcEEEEeCC
Q 028802 123 E---------YPIESLALSHD-RKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 123 ~---------~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~ 153 (203)
. .....++++|+ +..+++-.....|+.++++
T Consensus 389 dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 389 DGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 0 14788999995 5555555567788888753
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.75 E-value=0.0063 Score=45.16 Aligned_cols=151 Identities=12% Similarity=-0.081 Sum_probs=89.1
Q ss_pred cccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC--CeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS--GTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~ 78 (203)
++++.+..| ++-...+.|.++++........+.........+++.|.+..|+.+... +.|..+++. +.....+..
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--G~~~~~~~~ 160 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVT 160 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCCEEEEEC
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC--CCCeEEEEE
Confidence 455544444 343556788888876543333333333567899999876666555442 678888875 333333322
Q ss_pred CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeee-ccC-CCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPI-AEH-SEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
..-.....+ ++|++..|+.+. ..+.|..+++... ....+ ... .......+++. .+..+++....+.|..++..+
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCC
Confidence 023445667 888877777665 4578999998643 22222 211 11245677775 344555555678899998765
Q ss_pred cc
Q 028802 155 IL 156 (203)
Q Consensus 155 ~~ 156 (203)
+.
T Consensus 239 g~ 240 (316)
T 1ijq_A 239 GS 240 (316)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.72 E-value=0.0088 Score=46.00 Aligned_cols=152 Identities=11% Similarity=-0.089 Sum_probs=88.0
Q ss_pred cccccCCEE-EEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC--CCeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++.+.+..| ++-...+.|.+.++........+...-.....|++.|.+..|+.+.. .+.|...++. +.....+..
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d--G~~~~~~~~ 242 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVT 242 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT--SCSCEEEEC
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC--CCccEEEEE
Confidence 444433333 33345567777777655433333333445789999997666665543 3678888875 333333322
Q ss_pred CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCC-CcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
..-.....| ++|++..|+.+. ..+.|..+++........+.... ......+++. .+..+++-...+.|..++..++
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence 033456777 898877777765 46789999986433322222211 1135567763 3344455556788988886555
Q ss_pred c
Q 028802 156 L 156 (203)
Q Consensus 156 ~ 156 (203)
.
T Consensus 322 ~ 322 (400)
T 3p5b_L 322 S 322 (400)
T ss_dssp C
T ss_pred C
Confidence 4
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.72 E-value=0.00018 Score=59.48 Aligned_cols=151 Identities=9% Similarity=-0.058 Sum_probs=85.1
Q ss_pred CcccccCCEEEEEc-CCCeEEEEEcCC----CeEEEeecCCcccEEEEEEeeCCCE-EEEecCCCeEEEEEcCCccccce
Q 028802 1 MTFAADAMKLLGTS-GDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKNGRK-VVCGSQSGTVLLYSWGYFKDCSD 74 (203)
Q Consensus 1 l~~sp~~~~l~~~~-~d~~i~v~d~~~----~~~~~~~~~~~~~i~~l~~~~~~~~-l~~~~~d~~i~v~d~~~~~~~~~ 74 (203)
|+|++.+..|+.+. ..+.|+.+++.+ ......+.........|++.+.+.. +++-...+.|.++++.. ....
T Consensus 411 la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg--~~~~ 488 (699)
T 1n7d_A 411 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK 488 (699)
T ss_dssp CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS--CCEE
T ss_pred EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC--CceE
Confidence 46777666666553 457888888765 2222222222223456788754444 44444567899998753 3333
Q ss_pred eeecCCCCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEE-eCCCcEEEE
Q 028802 75 RFVGLSPNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI-SHDSMLKLW 150 (203)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iw 150 (203)
.+..........+ ++|.+.+|+.+.. .+.|.++++.. .....+..........|+|+|++..|+.+ ...+.|.++
T Consensus 489 ~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~ 567 (699)
T 1n7d_A 489 TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 567 (699)
T ss_dssp EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEE
Confidence 3322022344566 7886666655543 26788877653 22222211111245679999987665544 466789999
Q ss_pred eCCC
Q 028802 151 DLDD 154 (203)
Q Consensus 151 d~~~ 154 (203)
++..
T Consensus 568 d~dG 571 (699)
T 1n7d_A 568 DVNG 571 (699)
T ss_dssp CSSS
T ss_pred ccCC
Confidence 9865
No 285
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.67 E-value=0.0083 Score=45.19 Aligned_cols=135 Identities=16% Similarity=0.212 Sum_probs=87.7
Q ss_pred CCeEEEEEcC--CCeEEEeecC------Cc-ccEEEEEE--eeC-CC-EEEEecCCCeEEEEEcCC------ccccceee
Q 028802 16 DGTLSVCNLR--KNTVQTRSEF------SE-EELTSVVL--MKN-GR-KVVCGSQSGTVLLYSWGY------FKDCSDRF 76 (203)
Q Consensus 16 d~~i~v~d~~--~~~~~~~~~~------~~-~~i~~l~~--~~~-~~-~l~~~~~d~~i~v~d~~~------~~~~~~~~ 76 (203)
+++|.+|++. ++. +..+.. .. ..+..+++ +|. +. ++++...+|.+..|++.. ..+.++.|
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5889999773 333 344421 11 44566777 664 43 677888899999998842 12445666
Q ss_pred ecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEcc-----CCceeeeec-cCCCcceEEEEE--eCCCC-eEEEEe-CCC
Q 028802 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGIL-----PNRIIQPIA-EHSEYPIESLAL--SHDRK-FLGSIS-HDS 145 (203)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~-----~~~~~~~~~-~~~~~~i~~~~~--~~~~~-~l~~~~-~d~ 145 (203)
.. . ..+..+ +.+....|+.+-++.-|..|+.+ +++.+..+. .+....+..|++ .++++ +|++++ .+.
T Consensus 177 ~l-g-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 177 KM-N-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EC-S-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred cC-C-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 65 3 344445 88888999999998778888855 234554442 221235888888 45666 676666 678
Q ss_pred cEEEEeCC
Q 028802 146 MLKLWDLD 153 (203)
Q Consensus 146 ~i~iwd~~ 153 (203)
.+.+||..
T Consensus 255 s~~Vydr~ 262 (355)
T 3amr_A 255 SYAIYDRQ 262 (355)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 99999996
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.58 E-value=0.023 Score=47.72 Aligned_cols=152 Identities=11% Similarity=-0.108 Sum_probs=88.6
Q ss_pred CcccccCCEEEE-EcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC--CCeEEEEEcCCccccceeee
Q 028802 1 MTFAADAMKLLG-TSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFV 77 (203)
Q Consensus 1 l~~sp~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~ 77 (203)
|++.+.++.|+. -...+.|.+.++........+.........|++.|.+..|+.+.. .+.|.+.++. +.....+.
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~~~~~lv 553 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLV 553 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCCEEEEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC--CCceEEEE
Confidence 355655654444 345678888888755443333333455789999997666666553 3678888875 33333333
Q ss_pred cCCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCC-CcceEEEEEeCCCCeEE-EEeCCCcEEEEeCC
Q 028802 78 GLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLG-SISHDSMLKLWDLD 153 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~ 153 (203)
.........| +++.+..|+.+. ..+.|..+++........+.... -.....|++. +.+|+ +-...+.|...+..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCC
Confidence 2033456777 787777777665 45679999886433333332211 1134566663 33444 44466778888765
Q ss_pred Ccc
Q 028802 154 DIL 156 (203)
Q Consensus 154 ~~~ 156 (203)
++.
T Consensus 632 tG~ 634 (791)
T 3m0c_C 632 TGS 634 (791)
T ss_dssp TCC
T ss_pred CCc
Confidence 553
No 287
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.53 E-value=0.018 Score=44.47 Aligned_cols=134 Identities=13% Similarity=0.152 Sum_probs=83.8
Q ss_pred CCeEEEEEcCCCeEEEeecCC----cccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcc---c--------cceeeec--
Q 028802 16 DGTLSVCNLRKNTVQTRSEFS----EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK---D--------CSDRFVG-- 78 (203)
Q Consensus 16 d~~i~v~d~~~~~~~~~~~~~----~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~---~--------~~~~~~~-- 78 (203)
++.||..++......+.+... -..|..+..+|+|.+|+..+. ..|.|..+.... . ....+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 366777776633222333322 235778999999999998864 578888876211 0 0111211
Q ss_pred ---CCCCceeEE-EeeC---CCEEEEEcCCCcEEEEEccCC--ceeeeeccCC--------CcceEEEEEeCCCCeEEEE
Q 028802 79 ---LSPNSVDAL-LKLD---EDRVITGSENGLISLVGILPN--RIIQPIAEHS--------EYPIESLALSHDRKFLGSI 141 (203)
Q Consensus 79 ---~~~~~v~~~-~~~~---~~~l~~~~~dg~v~v~d~~~~--~~~~~~~~~~--------~~~i~~~~~~~~~~~l~~~ 141 (203)
....+|..+ |+|- +..|++-..|+.|++||+... ++. .+.... ...|.+++|.+++-.|+..
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl 197 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCL 197 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEE
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEE
Confidence 013457777 9884 568999999999999999752 222 222110 1268899999988777775
Q ss_pred e--CCCcEEEEe
Q 028802 142 S--HDSMLKLWD 151 (203)
Q Consensus 142 ~--~d~~i~iwd 151 (203)
+ ..|.|+-.-
T Consensus 198 ~~t~~GDIYAlc 209 (452)
T 3pbp_A 198 NTTEGGDIFAFY 209 (452)
T ss_dssp ECTTSCEEEEES
T ss_pred ecCCCCCEEEEC
Confidence 5 677776554
No 288
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.52 E-value=0.017 Score=43.76 Aligned_cols=148 Identities=10% Similarity=0.088 Sum_probs=85.6
Q ss_pred cccccCCEEEEEc------------CCCeEEEEEcCC--CeE-EEeecC-----CcccEEEEEEee--CCC-EEEEe-cC
Q 028802 2 TFAADAMKLLGTS------------GDGTLSVCNLRK--NTV-QTRSEF-----SEEELTSVVLMK--NGR-KVVCG-SQ 57 (203)
Q Consensus 2 ~~sp~~~~l~~~~------------~d~~i~v~d~~~--~~~-~~~~~~-----~~~~i~~l~~~~--~~~-~l~~~-~~ 57 (203)
+..|+|..+++++ .+|.|.++|..+ ++. ...+.+ .......+.+.+ ++. +|+++ ..
T Consensus 56 ~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 56 EILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp EECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS
T ss_pred EEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC
Confidence 4567765555541 689999999873 222 112222 234677888776 454 34443 32
Q ss_pred --CCeEEEEEcCCccccce---eeecCCCCceeEE-EeeCCCEEEEEcC-----------------CCcEEEEEccCCce
Q 028802 58 --SGTVLLYSWGYFKDCSD---RFVGLSPNSVDAL-LKLDEDRVITGSE-----------------NGLISLVGILPNRI 114 (203)
Q Consensus 58 --d~~i~v~d~~~~~~~~~---~~~~~~~~~v~~~-~~~~~~~l~~~~~-----------------dg~v~v~d~~~~~~ 114 (203)
..++.+|++...+.... .+.+..-.....+ +.++|.+.++... .|.|+.++. ++.
T Consensus 136 ~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~ 213 (355)
T 3sre_A 136 GSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV 213 (355)
T ss_dssp TTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC
T ss_pred CCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE
Confidence 56788888864333222 2322112345666 7888887666431 244555554 333
Q ss_pred eeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCC
Q 028802 115 IQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (203)
Q Consensus 115 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (203)
......- . ....++|+||+++|+.+. ..+.|..|++.
T Consensus 214 ~~~~~~l-~-~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 214 RVVAEGF-D-FANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEEEEE-S-SEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEeecCC-c-ccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 2222222 2 468899999998877665 57889999986
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.50 E-value=0.0026 Score=48.09 Aligned_cols=137 Identities=15% Similarity=0.067 Sum_probs=74.2
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeE--EEeec---CCcccEEEEEEeeC---CCEEEEecC-C-----CeEEEEEc
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV--QTRSE---FSEEELTSVVLMKN---GRKVVCGSQ-S-----GTVLLYSW 66 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~---~~~~~i~~l~~~~~---~~~l~~~~~-d-----~~i~v~d~ 66 (203)
|+|.|+|+++++ ...+.|++++ .+.. +..+. ........|+++|+ +..|+++.. . +.|..|+.
T Consensus 36 ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 36 LAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 578999985555 5569999998 4432 22221 22456889999998 555554443 2 57888877
Q ss_pred CCcc-----ccceeee--cCCCCceeEE-EeeCCCEEEEEcC-------------CCcEEEEEccCC------------c
Q 028802 67 GYFK-----DCSDRFV--GLSPNSVDAL-LKLDEDRVITGSE-------------NGLISLVGILPN------------R 113 (203)
Q Consensus 67 ~~~~-----~~~~~~~--~~~~~~v~~~-~~~~~~~l~~~~~-------------dg~v~v~d~~~~------------~ 113 (203)
.... ..+..+. .........+ |.|+|.+.++.+. .|.|..++.... .
T Consensus 113 ~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~ 192 (352)
T 2ism_A 113 LGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGA 192 (352)
T ss_dssp CSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTS
T ss_pred CCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCC
Confidence 5210 1111122 1011223566 8999976665432 245666665420 0
Q ss_pred eeeee-ccCCCcceEEEEEeC-CCCeEEEEe
Q 028802 114 IIQPI-AEHSEYPIESLALSH-DRKFLGSIS 142 (203)
Q Consensus 114 ~~~~~-~~~~~~~i~~~~~~~-~~~~l~~~~ 142 (203)
....+ .++ . ....++|+| ++..+++-.
T Consensus 193 ~~~i~a~G~-r-np~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 193 RPEVYSLGH-R-NPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp CTTEEEECC-S-EECCCEECTTTCCEEEEEE
T ss_pred CccEEEEcC-C-CcccEEEECCCCCEEEEEc
Confidence 11111 122 2 366789999 566555443
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.48 E-value=0.03 Score=45.70 Aligned_cols=152 Identities=11% Similarity=0.001 Sum_probs=89.5
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCCCeE-EEeecCCcccEEEEEEeeCCCEEE-EecCCCeEEEEEcCCccccceeee
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTV-QTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFV 77 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~ 77 (203)
|+|++.+..|+.+ ...+.|..+++..... ...+...-.....|++.+.+..|+ +-...+.|.+.++.. .....+.
T Consensus 45 ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG--~~~~~l~ 122 (619)
T 3s94_A 45 VDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG--SLRKVLF 122 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEE
T ss_pred EEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC--CCEEEEE
Confidence 3566655555544 3356777777765422 222333335678999998655554 445678999999863 3333333
Q ss_pred -cCCCCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeC
Q 028802 78 -GLSPNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (203)
Q Consensus 78 -~~~~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (203)
. .-.....+ +.|.+..|+.... .+.|...++. |.....+..........+++++++..|+.+. ..+.|..+++
T Consensus 123 ~~-~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~ 200 (619)
T 3s94_A 123 WQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 200 (619)
T ss_dssp CS-SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESS
T ss_pred eC-CCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecC
Confidence 3 34456667 7887666666553 3567666665 3333333221122578999999776666554 5678999998
Q ss_pred CCcc
Q 028802 153 DDIL 156 (203)
Q Consensus 153 ~~~~ 156 (203)
....
T Consensus 201 dG~~ 204 (619)
T 3s94_A 201 DGTN 204 (619)
T ss_dssp SCCE
T ss_pred CCCc
Confidence 7643
No 291
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.46 E-value=0.0036 Score=51.31 Aligned_cols=66 Identities=14% Similarity=0.130 Sum_probs=42.8
Q ss_pred ccccCCEEEEEcC-CCeEEEEEcCCCeEEEeecCCcc-cEEEEEEeeCCCEEEEec-CC-----CeEEEEEcCC
Q 028802 3 FAADAMKLLGTSG-DGTLSVCNLRKNTVQTRSEFSEE-ELTSVVLMKNGRKVVCGS-QS-----GTVLLYSWGY 68 (203)
Q Consensus 3 ~sp~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~-~i~~l~~~~~~~~l~~~~-~d-----~~i~v~d~~~ 68 (203)
+.++++++++|+. +..+.+||..++.-...-.-+.. .-.+++..++++.++.|+ .+ ..+.+||..+
T Consensus 250 ~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 250 MDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp ECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred CCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 4578888888874 46899999887643322111111 123455567899999888 33 5688999853
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.46 E-value=0.011 Score=44.10 Aligned_cols=148 Identities=8% Similarity=0.038 Sum_probs=90.7
Q ss_pred cccCCEEEEEc-------------CCCeEEEEEcC---CCeEEEeecC-------------CcccEEEEEEeeCCCEEEE
Q 028802 4 AADAMKLLGTS-------------GDGTLSVCNLR---KNTVQTRSEF-------------SEEELTSVVLMKNGRKVVC 54 (203)
Q Consensus 4 sp~~~~l~~~~-------------~d~~i~v~d~~---~~~~~~~~~~-------------~~~~i~~l~~~~~~~~l~~ 54 (203)
.|+++++++.. .+..|..||+. +++.+....- .......++..++|+..++
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 57776666543 25779999998 7766544431 1135789999999999998
Q ss_pred ecCC-CeEEEEEcCCccccceeeecC-----CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCce--eeeec--cC--
Q 028802 55 GSQS-GTVLLYSWGYFKDCSDRFVGL-----SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI--IQPIA--EH-- 121 (203)
Q Consensus 55 ~~~d-~~i~v~d~~~~~~~~~~~~~~-----~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~--~~~~~--~~-- 121 (203)
++.. +.|..++.. +..+..+... .......+ ++|++..|++....|.|..+|+..... +. .. +.
T Consensus 154 ~s~~~~~I~rV~pd--G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~ 230 (334)
T 2p9w_A 154 FALGMPAIARVSAD--GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFG 230 (334)
T ss_dssp EEESSCEEEEECTT--SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCC
T ss_pred CCCCCCeEEEEeCC--CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcc
Confidence 8887 877776654 3333332210 11225567 899999999887799999999874322 11 11 21
Q ss_pred CCcceEEE-EEeCCCCe-EEEEeCCCcEEEEeCCC
Q 028802 122 SEYPIESL-ALSHDRKF-LGSISHDSMLKLWDLDD 154 (203)
Q Consensus 122 ~~~~i~~~-~~~~~~~~-l~~~~~d~~i~iwd~~~ 154 (203)
.......| ....+|+. |++....+.+.+.+.+.
T Consensus 231 ~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 231 TLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred cccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 01123343 33347777 45555666666665433
No 293
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.46 E-value=0.0098 Score=44.86 Aligned_cols=139 Identities=11% Similarity=0.047 Sum_probs=76.8
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeE--EEee----cCCcccEEEEEEeeC---CCEEEEe---cCCCeEEEEEcCC
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV--QTRS----EFSEEELTSVVLMKN---GRKVVCG---SQSGTVLLYSWGY 68 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~--~~~~----~~~~~~i~~l~~~~~---~~~l~~~---~~d~~i~v~d~~~ 68 (203)
|+|.|+|.++++-...|.|++++..++.. +..+ .........|+++|+ +..|++. ..++.|.-|.+..
T Consensus 37 ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 37 LAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred EEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 57899998777765589999998665543 2222 123466899999985 3444432 2345666666542
Q ss_pred cc-------ccc---eeeecCCCCceeEE-EeeCCCEEEEEcC-------------CCcEEEEEccCC----c---eeee
Q 028802 69 FK-------DCS---DRFVGLSPNSVDAL-LKLDEDRVITGSE-------------NGLISLVGILPN----R---IIQP 117 (203)
Q Consensus 69 ~~-------~~~---~~~~~~~~~~v~~~-~~~~~~~l~~~~~-------------dg~v~v~d~~~~----~---~~~~ 117 (203)
.. ... ..+..........| |.|+|.+.++.+. .|.|.-++.... . ....
T Consensus 117 ~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i 196 (347)
T 3das_A 117 KKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPV 196 (347)
T ss_dssp TSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCE
T ss_pred CCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeE
Confidence 10 111 11111012233456 8999987776432 355555554321 0 0111
Q ss_pred e-ccCCCcceEEEEEeCCCCeEEEE
Q 028802 118 I-AEHSEYPIESLALSHDRKFLGSI 141 (203)
Q Consensus 118 ~-~~~~~~~i~~~~~~~~~~~l~~~ 141 (203)
+ .++ . ....++|+|+|..+++-
T Consensus 197 ~a~G~-R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 197 YSYGH-R-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp EEBCC-S-BCCEEEECTTCCEEEEE
T ss_pred EeeCC-C-CcceEEECCCCCEEEEe
Confidence 2 233 2 46789999987765543
No 294
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.43 E-value=0.019 Score=42.41 Aligned_cols=139 Identities=6% Similarity=-0.045 Sum_probs=82.6
Q ss_pred ccccCCEEEEEcCC--------------CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEec--CCCeEEEEEc
Q 028802 3 FAADAMKLLGTSGD--------------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS--QSGTVLLYSW 66 (203)
Q Consensus 3 ~sp~~~~l~~~~~d--------------~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~--~d~~i~v~d~ 66 (203)
+++++..|+.+... ..|+..++..++... +.... ...|++++..|+... .++.-.||-+
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPDP----CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECSC----EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecCC----ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 56788888776542 467777777654322 22111 236788899888775 3444444444
Q ss_pred CCccccceeeecCCCCceeEE-EeeCCCEEEEEcC-CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC
Q 028802 67 GYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (203)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 144 (203)
...+...+.+.. +.. . ++|+++.|+..+. ...|.+.++..+.....+. . ... ..+.|++.+|+.....
T Consensus 135 ~~dGs~~~~lt~-~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~---~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 135 RIDGEEKKKIKN-HYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-C---NCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp ETTSCCCEEEES-SCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-S---CEE-EEEEEETTEEEEEEGG
T ss_pred ECCCCCeEEEeC-CCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-C---Ccc-ceeeecCCEEEEEEcC
Confidence 333445555654 332 3 6888988887765 5678888877654433332 2 222 3466989888766533
Q ss_pred --CcEEEEeCCCcc
Q 028802 145 --SMLKLWDLDDIL 156 (203)
Q Consensus 145 --~~i~iwd~~~~~ 156 (203)
..|..-++.+..
T Consensus 205 ~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 205 RDNAIVHVNINNPN 218 (302)
T ss_dssp GTTEEEEECSSSCC
T ss_pred CCcEEEEEECCCCC
Confidence 356666665543
No 295
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.43 E-value=0.0047 Score=43.40 Aligned_cols=147 Identities=7% Similarity=-0.107 Sum_probs=80.0
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeE------EEee-cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc-
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV------QTRS-EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC- 72 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~------~~~~-~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~- 72 (203)
|+|+|+|.+.++ .+|.|+-.+..+... ...+ ...-.....+.|.|+|.+.++ .||.|+-++-.+....
T Consensus 46 laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 46 LFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp EEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC
T ss_pred EEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCc
Confidence 578998886666 668877777654211 1111 111122467889999988877 5698887775332111
Q ss_pred c---eeeec-CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc-----eeeeeccCCCc-ceEEEEEeCCCCeEEEE
Q 028802 73 S---DRFVG-LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR-----IIQPIAEHSEY-PIESLALSHDRKFLGSI 141 (203)
Q Consensus 73 ~---~~~~~-~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~-----~~~~~~~~~~~-~i~~~~~~~~~~~l~~~ 141 (203)
+ ....+ ..-..+..| +.|+|.+.+.. ++.++-....++. ...+..++... .-..+.|.+++...++.
T Consensus 122 Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 122 WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 1 01111 012456777 79999887776 7775433222111 01111121121 34456789999877666
Q ss_pred eCCCcEEEEeCCCccc
Q 028802 142 SHDSMLKLWDLDDILK 157 (203)
Q Consensus 142 ~~d~~i~iwd~~~~~~ 157 (203)
++ ++|......+
T Consensus 200 --~g--~~Y~~~~p~~ 211 (236)
T 1tl2_A 200 --GG--KFYEDYPPSY 211 (236)
T ss_dssp --TT--EEEEESCCCS
T ss_pred --CC--eEEecCCccc
Confidence 66 4555444433
No 296
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.41 E-value=0.035 Score=46.46 Aligned_cols=144 Identities=13% Similarity=0.093 Sum_probs=87.8
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeecC--------CcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEF--------SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--------~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 77 (203)
+|+ |..|+.++-|..|+..++........ ....|.++...++++.|.+|+.++-|.+|+..+. . ...+.
T Consensus 367 ~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~-~-~~~~~ 443 (795)
T 4a2l_A 367 DKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG-Q-VENFN 443 (795)
T ss_dssp TSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC-C-EEEEC
T ss_pred CCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC-c-EEEee
Confidence 444 44566666788888877654332211 2356889988888885677777677999997642 2 22222
Q ss_pred c----CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeecc-----CCCcceEEEEEeCCCCeEEEEeCCCcE
Q 028802 78 G----LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE-----HSEYPIESLALSHDRKFLGSISHDSML 147 (203)
Q Consensus 78 ~----~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~d~~i 147 (203)
. .....|.++ ..++|.+.+. +.. -|.+|+..+++....... .....|.++...++|+..+.. . +-|
T Consensus 444 ~~~~~l~~~~v~~i~~d~~g~lwig-t~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl 519 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDGEGNLWLG-TLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGL 519 (795)
T ss_dssp TTTSCCSCSCEEEEEECSSSCEEEE-ESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCE
T ss_pred cCCCCcCCCeeEEEEECCCCCEEEE-ecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-Cce
Confidence 1 023467777 5667765554 444 488899877654322211 112368899888888765544 3 458
Q ss_pred EEEeCCCcc
Q 028802 148 KLWDLDDIL 156 (203)
Q Consensus 148 ~iwd~~~~~ 156 (203)
..|+..+..
T Consensus 520 ~~~~~~~~~ 528 (795)
T 4a2l_A 520 SVFKQEGLD 528 (795)
T ss_dssp EEEEEETTE
T ss_pred EEEeCCCCe
Confidence 888876543
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.40 E-value=0.0079 Score=45.49 Aligned_cols=136 Identities=13% Similarity=0.043 Sum_probs=73.9
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCe-EEEeec---CCcccEEEEEEeeC---CCEEEEecC----C----CeEEEEE
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSE---FSEEELTSVVLMKN---GRKVVCGSQ----S----GTVLLYS 65 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~---~~~~~i~~l~~~~~---~~~l~~~~~----d----~~i~v~d 65 (203)
|+|.|+|+++++ ...+.|++++ ..+. .+..+. ........|+++|+ +..|+++.. + ..|..|+
T Consensus 34 ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 34 IAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 578999975554 5569999997 3444 222221 22356889999997 455554433 2 5677777
Q ss_pred cCCcc------c-cceeeecCCCCceeEE-EeeCCCEEEEEcC-------------CCcEEEEEccCC---------cee
Q 028802 66 WGYFK------D-CSDRFVGLSPNSVDAL-LKLDEDRVITGSE-------------NGLISLVGILPN---------RII 115 (203)
Q Consensus 66 ~~~~~------~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-------------dg~v~v~d~~~~---------~~~ 115 (203)
..... + .+..+..........+ |.|+|.+.++.+. .|.|..++.... ..+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i 191 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPI 191 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCE
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcE
Confidence 65321 1 1111221011233456 8999986666432 245666654321 011
Q ss_pred eeeccCCCcceEEEEEeC-CCCeEEEE
Q 028802 116 QPIAEHSEYPIESLALSH-DRKFLGSI 141 (203)
Q Consensus 116 ~~~~~~~~~~i~~~~~~~-~~~~l~~~ 141 (203)
. -.++ . ....++|+| +++.+++-
T Consensus 192 ~-a~G~-r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 192 W-SYGH-R-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp E-EECC-S-CCCEEEECTTTCCEEEEE
T ss_pred E-EEcc-C-CcceEEEeCCCCCEEEEe
Confidence 1 1223 2 356899999 66655543
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.37 E-value=0.041 Score=44.93 Aligned_cols=150 Identities=11% Similarity=0.066 Sum_probs=91.9
Q ss_pred CcccccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEE-EecCCCeEEEEEcCCccccceeee-
Q 028802 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFV- 77 (203)
Q Consensus 1 l~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~- 77 (203)
|+|++....|+.+ ..++.|+.+++........+.........|++.+.+..|+ +-...+.|.+.++.. .....+.
T Consensus 42 l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG--~~~~~l~~ 119 (628)
T 4a0p_A 42 LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG--QHRQVLVW 119 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--TTCEEEEC
T ss_pred EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC--CcEEEEEe
Confidence 3567665555443 4567788888765433333333234466888887655554 444578899999863 3333332
Q ss_pred cCCCCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCC
Q 028802 78 GLSPNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (203)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (203)
. .-.....+ +.|....|+.... .+.|...++.... ...+... ......+++++++..|+.+. ..+.|..+++.
T Consensus 120 ~-~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~-~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 120 K-DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPN-VGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp S-SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECC-CCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 3 34456777 7886666666553 4677777765433 2222222 22678999999877776555 56789999886
Q ss_pred Cc
Q 028802 154 DI 155 (203)
Q Consensus 154 ~~ 155 (203)
..
T Consensus 197 G~ 198 (628)
T 4a0p_A 197 GL 198 (628)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.36 E-value=0.0012 Score=54.61 Aligned_cols=153 Identities=12% Similarity=-0.088 Sum_probs=84.1
Q ss_pred cccccCCEEE-EEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC--CCeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++.+.+..|+ +-...+.|.++++........+.........|++.|.+.+|+.+.. .+.|.++++.. .....+..
T Consensus 459 avD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG--~~~~~l~~ 536 (699)
T 1n7d_A 459 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVT 536 (699)
T ss_dssp ECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS--CCCCEESC
T ss_pred EEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC--CCeeEEEe
Confidence 4454444343 3345678888887765443333333344677889986665555443 26787777642 22222221
Q ss_pred CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCC-CcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
........| ++|++..|+.+. ..+.|.++++........+.... ......|++..+ ..+++....+.|..++..++
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC
Confidence 022334566 888766655554 56789999986432222222110 112345566544 34445556788999987665
Q ss_pred cc
Q 028802 156 LK 157 (203)
Q Consensus 156 ~~ 157 (203)
..
T Consensus 616 ~~ 617 (699)
T 1n7d_A 616 SD 617 (699)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 300
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.32 E-value=0.045 Score=45.80 Aligned_cols=141 Identities=11% Similarity=0.046 Sum_probs=85.6
Q ss_pred ccCCEEEEEcCCCeEEEEEcCCCeEEEeec----CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec--
Q 028802 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-- 78 (203)
Q Consensus 5 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-- 78 (203)
++++.|.+|+.++-|.+|+..+++...... .....|.++...+++.+.+.. .. -+.+|+..+. ....+..
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~--~~~~~~~~~ 490 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQR--SFTTIEKEK 490 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTT--EEEECCBCT
T ss_pred CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCC--eEEEccccc
Confidence 455546666776779999988775533221 124568888888888765554 44 4888887532 2222221
Q ss_pred ----CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeecc------CCCcceEEEEEeCCCCeEEEEeCCCcE
Q 028802 79 ----LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE------HSEYPIESLALSHDRKFLGSISHDSML 147 (203)
Q Consensus 79 ----~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~d~~i 147 (203)
.....+.++ ..++|.+.+.. . +-|..|+..++.. .+.. .....|.++...++|+..+.. .. -|
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl 564 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GF 564 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CE
T ss_pred cccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-Cc
Confidence 023457777 57777765544 4 4588899877654 2221 111268889888888755543 33 57
Q ss_pred EEEeCCCc
Q 028802 148 KLWDLDDI 155 (203)
Q Consensus 148 ~iwd~~~~ 155 (203)
..||..+.
T Consensus 565 ~~~d~~~~ 572 (795)
T 4a2l_A 565 YCFNEKDK 572 (795)
T ss_dssp EEEETTTT
T ss_pred eeECCCCC
Confidence 88887654
No 301
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.28 E-value=0.016 Score=45.47 Aligned_cols=99 Identities=10% Similarity=0.077 Sum_probs=55.7
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeE--EEeecC------CcccEEEEEEeeC---CCEEEEecC------------
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV--QTRSEF------SEEELTSVVLMKN---GRKVVCGSQ------------ 57 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~------~~~~i~~l~~~~~---~~~l~~~~~------------ 57 (203)
|+|.|+|+++++-...+.|++++..++.. +..+.. ....+..|+|+|+ +..|+++..
T Consensus 32 ~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~ 111 (454)
T 1cru_A 32 LLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELP 111 (454)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSC
T ss_pred EEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccc
Confidence 57899998777655445788887654533 222321 2456789999995 555544432
Q ss_pred -CCeEEEEEcCCcc------c-cceeeecCCCCceeEE-EeeCCCEEEEEc
Q 028802 58 -SGTVLLYSWGYFK------D-CSDRFVGLSPNSVDAL-LKLDEDRVITGS 99 (203)
Q Consensus 58 -d~~i~v~d~~~~~------~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~ 99 (203)
...|..|++.... + .+..+..........| |.|+|.+.++.+
T Consensus 112 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 112 NQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2356666653211 1 1111211012345667 899998777644
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.22 E-value=0.063 Score=43.86 Aligned_cols=150 Identities=10% Similarity=-0.011 Sum_probs=89.6
Q ss_pred cccccCCEEE-EEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC--CCeEEEEEcCCccccceeeec
Q 028802 2 TFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (203)
Q Consensus 2 ~~sp~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~ 78 (203)
++.+.+..|+ +-...+.|.+.++........+...-.....|++.|....|+.+.. .+.|...++. +.....+..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--G~~~~~l~~ 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--GSERTTLVP 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC--CCceEEEEC
Confidence 4454444443 3344677888887654322222233455789999986666665553 4677777765 333444433
Q ss_pred CCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 79 LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
.......+ +++++..|+.+. ..+.|..+++..... ..+..... ....+++.. +..+++-...+.|...|..++.
T Consensus 164 -~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~-~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 164 -NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLP-HPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp -SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCS-CEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred -CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCC-CceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 44556677 888777777665 467899999864332 23333222 456777765 3444454467889888876664
Q ss_pred c
Q 028802 157 K 157 (203)
Q Consensus 157 ~ 157 (203)
.
T Consensus 240 ~ 240 (628)
T 4a0p_A 240 N 240 (628)
T ss_dssp S
T ss_pred c
Confidence 3
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.10 E-value=0.05 Score=40.48 Aligned_cols=144 Identities=8% Similarity=0.023 Sum_probs=78.5
Q ss_pred cccccCCEEEEEcCCCeEEEEEc--CCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecC
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNL--RKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~--~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
+++|++.+++++...+.++-.|- .+.+.+. ......+..+.+.+++..+++ +.+|.+++.... .+.....+...
T Consensus 169 ~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D-~G~tW~~~~~~ 244 (327)
T 2xbg_A 169 NRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPD-NSENWGELLSP 244 (327)
T ss_dssp EECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETT-EEEEECCCBCT
T ss_pred EEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCC-CCCeeEeccCC
Confidence 45677777766654333333342 2223332 233456888999888876654 456777776422 13333333210
Q ss_pred ---CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccC--CCcceEEEEEeCCCCeEEEEeCCCcEEEEeC
Q 028802 80 ---SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEH--SEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (203)
Q Consensus 80 ---~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (203)
....+..+ +.+++.+++++. ++.| ++....|+.-..+... ....++++.|.++++ +++++.+|.|..++-
T Consensus 245 ~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 245 LRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp TSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred cccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 12346677 677776666554 6666 3444445443333321 012578888876554 566667888777653
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.10 E-value=0.04 Score=40.17 Aligned_cols=143 Identities=10% Similarity=0.027 Sum_probs=74.3
Q ss_pred cCCEEEEEcCC-----CeEEEEEcCCCeE--EEeecCCcccEEEEEEeeCCCEEEEecCC-----CeEEEEEcCCccccc
Q 028802 6 DAMKLLGTSGD-----GTLSVCNLRKNTV--QTRSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFKDCS 73 (203)
Q Consensus 6 ~~~~l~~~~~d-----~~i~v~d~~~~~~--~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~ 73 (203)
+++.++.|+.+ ..+.+||+.+..- +..+......-..+ .-++..++.|+.+ ..+.+||+.+ ..+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~d~~~--~~W 187 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLV--VASGVIYCLGGYDGLNILNSVEKYDPHT--GHW 187 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTT--TEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEE--EECCEEEEECCCCCCcccceEEEEeCCC--CcE
Confidence 45555666543 4688899877643 22222222211122 2366777777654 4688888764 233
Q ss_pred eeeecCCCCc--eeEEEeeCCCEEEEEcCC-----CcEEEEEccCCceeeeeccCC-CcceEEEEEeCCCCeEEEEeCC-
Q 028802 74 DRFVGLSPNS--VDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSISHD- 144 (203)
Q Consensus 74 ~~~~~~~~~~--v~~~~~~~~~~l~~~~~d-----g~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d- 144 (203)
..+.. ...+ -.++...++.+++.|+.+ ..+.+||+.+.+-...-.... ......+. -+++.++.|+.+
T Consensus 188 ~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 188 TNVTP-MATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDG 264 (301)
T ss_dssp EEECC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred EeCCC-CCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCC
Confidence 33322 1111 112233466777777653 468999998765432211111 11122222 266677777754
Q ss_pred ----CcEEEEeCCCc
Q 028802 145 ----SMLKLWDLDDI 155 (203)
Q Consensus 145 ----~~i~iwd~~~~ 155 (203)
..+.+||+.+.
T Consensus 265 ~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 265 NSLLSSIECYDPIID 279 (301)
T ss_dssp SSBEEEEEEEETTTT
T ss_pred CcccccEEEEcCCCC
Confidence 35778887654
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.08 E-value=0.0073 Score=46.66 Aligned_cols=105 Identities=10% Similarity=0.006 Sum_probs=70.2
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCCCe------------EEEeecC------CcccEEEEEEeeC---CCEEEEecCCCe
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRKNT------------VQTRSEF------SEEELTSVVLMKN---GRKVVCGSQSGT 60 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~~~------------~~~~~~~------~~~~i~~l~~~~~---~~~l~~~~~d~~ 60 (203)
..||+|.+||..+. .+|.|..+..+. ....+.- ...+|..+.|+|- +..|++-..|+.
T Consensus 72 vlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~ 150 (452)
T 3pbp_A 72 ISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT 150 (452)
T ss_dssp EECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC
T ss_pred EECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE
Confidence 46899999998865 689999887321 0112211 2567999999994 568999999999
Q ss_pred EEEEEcCCcc-ccceeeec--------CCCCceeEE-EeeCCCEEEEEc--CCCcEEEEE
Q 028802 61 VLLYSWGYFK-DCSDRFVG--------LSPNSVDAL-LKLDEDRVITGS--ENGLISLVG 108 (203)
Q Consensus 61 i~v~d~~~~~-~~~~~~~~--------~~~~~v~~~-~~~~~~~l~~~~--~dg~v~v~d 108 (203)
|++||+.... .+. .+.. .....+.++ |..++-.|+..+ ..|.|+-..
T Consensus 151 Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 151 ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 9999997421 111 2211 012456677 877777777755 778887643
No 306
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.07 E-value=0.012 Score=48.14 Aligned_cols=114 Identities=11% Similarity=-0.004 Sum_probs=69.0
Q ss_pred EEEEee-CCCEEEEecCCC-----------eEEEEEcCCcc-ccceeeecCCCCceeEE-EeeCCCEEEEEcC-CCcEEE
Q 028802 42 SVVLMK-NGRKVVCGSQSG-----------TVLLYSWGYFK-DCSDRFVGLSPNSVDAL-LKLDEDRVITGSE-NGLISL 106 (203)
Q Consensus 42 ~l~~~~-~~~~l~~~~~d~-----------~i~v~d~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-dg~v~v 106 (203)
..++.+ +++.++.|+.+. .+.+||..+.. ..+..+...+.....++ +.++++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456677 788888876532 57888886421 11222221011112223 5688999999884 457999
Q ss_pred EEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CC-----CcEEEEeCCCc
Q 028802 107 VGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HD-----SMLKLWDLDDI 155 (203)
Q Consensus 107 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~ 155 (203)
||+.+.+-...-..+....-.+++..++++.++.|+ .+ ..+.+||..+.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 999876544322222111223456667999999888 44 56899998764
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.01 E-value=0.018 Score=43.49 Aligned_cols=137 Identities=13% Similarity=0.033 Sum_probs=71.6
Q ss_pred CcccccCCEEEEEcCCCeEEEEEcCCCeEEEee-------cCCcccEEEEEEeeC---CCEEEEec-C-------CCeEE
Q 028802 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRS-------EFSEEELTSVVLMKN---GRKVVCGS-Q-------SGTVL 62 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~-------~~~~~~i~~l~~~~~---~~~l~~~~-~-------d~~i~ 62 (203)
|+|.|+|+.|+++...|.|++++.. +.....+ .........|+++|+ +..|+++. . ...|.
T Consensus 23 i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~ 101 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVG 101 (353)
T ss_dssp EEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEE
T ss_pred EEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEE
Confidence 5789999834444567999999853 3321111 112345789999995 44444432 2 23566
Q ss_pred EEEcCCccc---ccee-eecC-----CCCceeEE-EeeCCCEEEEEcC-------------CCcEEEEEccCCc------
Q 028802 63 LYSWGYFKD---CSDR-FVGL-----SPNSVDAL-LKLDEDRVITGSE-------------NGLISLVGILPNR------ 113 (203)
Q Consensus 63 v~d~~~~~~---~~~~-~~~~-----~~~~v~~~-~~~~~~~l~~~~~-------------dg~v~v~d~~~~~------ 113 (203)
.|++..... ..+. +... .......+ |.|+|.+.++.+. .|.|.-++....-
T Consensus 102 r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf 181 (353)
T 2g8s_A 102 YGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPF 181 (353)
T ss_dssp EEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTT
T ss_pred EEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCC
Confidence 666642111 1111 1110 11123456 8999965555432 2467667654210
Q ss_pred ------eeeee-ccCCCcceEEEEEeC-CCCeEEE
Q 028802 114 ------IIQPI-AEHSEYPIESLALSH-DRKFLGS 140 (203)
Q Consensus 114 ------~~~~~-~~~~~~~i~~~~~~~-~~~~l~~ 140 (203)
....+ .++ . ....++|+| +|+.+++
T Consensus 182 ~~~~~~~~~i~a~G~-r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 182 IKESGVRAEIWSYGI-R-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTSTTSCTTEEEECC-S-EEEEEEEETTTTEEEEE
T ss_pred cCCCCCCccEEEEcC-c-CccceEEECCCCCEEEE
Confidence 11112 223 2 478899999 5554443
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.00 E-value=0.054 Score=39.51 Aligned_cols=144 Identities=10% Similarity=0.012 Sum_probs=73.0
Q ss_pred cCCEEEEEcCC-----CeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecCC-------CeEEEEEcCCccc
Q 028802 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-------GTVLLYSWGYFKD 71 (203)
Q Consensus 6 ~~~~l~~~~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~ 71 (203)
+++.++.|+.+ ..+.+||+.+..-.. .+....... +++ .-++..++.|+.+ ..+.+||+.+ .
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~--~ 183 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVG-VVGGLLYAVGGYDVASRQCLSTVECYNATT--N 183 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCEETTTTEECCCEEEEETTT--T
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEE-EECCEEEEEeCCCCCCCccccEEEEEeCCC--C
Confidence 45556666544 357788887764322 222212211 222 2356666666542 3588888864 2
Q ss_pred cceeeecCCCC--ceeEEEeeCCCEEEEEcCC-----CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC
Q 028802 72 CSDRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (203)
Q Consensus 72 ~~~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 144 (203)
.+..+.. ... .-.++...++.+++.|+.+ ..+.+||+.+.+-...-.......-.+++ ..++..++.|+.+
T Consensus 184 ~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 184 EWTYIAE-MSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDD 261 (302)
T ss_dssp EEEEECC-CSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBC
T ss_pred cEEECCC-CccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcC
Confidence 3333222 111 1112233467777777654 36889998876433221111110111222 2366777777754
Q ss_pred C-----cEEEEeCCCc
Q 028802 145 S-----MLKLWDLDDI 155 (203)
Q Consensus 145 ~-----~i~iwd~~~~ 155 (203)
+ .+.+||+.+.
T Consensus 262 ~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 262 GSCNLASVEYYNPTTD 277 (302)
T ss_dssp SSSBCCCEEEEETTTT
T ss_pred CCcccccEEEEcCCCC
Confidence 3 4888888654
No 309
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.95 E-value=0.12 Score=43.06 Aligned_cols=142 Identities=13% Similarity=0.032 Sum_probs=82.0
Q ss_pred cCCEEEEEcCCCeEEEEEcCCCeEEEeec--CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCC---
Q 028802 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS--- 80 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~--- 80 (203)
++. |..|+.++-|..++..+++...... .....|.++...+++.+. .++. +-|.+|+.... . ...+....
T Consensus 417 ~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~Gl~~~~~~~~-~-~~~~~~~~~~~ 491 (781)
T 3v9f_A 417 EGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW-IGTH-AGVFVIDLASK-K-VIHHYDTSNSQ 491 (781)
T ss_dssp TSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE-EEET-TEEEEEESSSS-S-CCEEECTTTSS
T ss_pred CCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE-EEEC-CceEEEeCCCC-e-EEecccCcccc
Confidence 444 4445555678888877765433221 134568888877777644 4444 55888887632 2 22222101
Q ss_pred --CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccC---CCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCC
Q 028802 81 --PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEH---SEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 81 --~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (203)
...+.++ ..++|.+.+ |+..+-|..|+..+++.. .+... ....|.++...++|...+.. ..|.|..||..+
T Consensus 492 ~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~ 568 (781)
T 3v9f_A 492 LLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARN 568 (781)
T ss_dssp CSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTT
T ss_pred cccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCC
Confidence 3457777 577776554 444333777887665433 23211 12368888888888755543 455558888765
Q ss_pred c
Q 028802 155 I 155 (203)
Q Consensus 155 ~ 155 (203)
.
T Consensus 569 ~ 569 (781)
T 3v9f_A 569 F 569 (781)
T ss_dssp C
T ss_pred C
Confidence 4
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.87 E-value=0.066 Score=39.15 Aligned_cols=144 Identities=8% Similarity=0.045 Sum_probs=74.2
Q ss_pred cCCEEEEEcCC----CeEEEEEcCCCeEE--EeecCCcccEEEEEEeeCCCEEEEecCC------CeEEEEEcCCccccc
Q 028802 6 DAMKLLGTSGD----GTLSVCNLRKNTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQS------GTVLLYSWGYFKDCS 73 (203)
Q Consensus 6 ~~~~l~~~~~d----~~i~v~d~~~~~~~--~~~~~~~~~i~~l~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~ 73 (203)
++..++.|+.+ ..+.+||+.++.-. ..+.........+ .-++..++.|+.+ ..+.+||..+ ..+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~--~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRT--ESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTT--TEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCC--Cce
Confidence 45556666644 67888998876432 2222222222222 2366777777654 4688888864 233
Q ss_pred eeeecCCCC--ceeEEEeeCCCEEEEEcC---------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 74 DRFVGLSPN--SVDALLKLDEDRVITGSE---------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 74 ~~~~~~~~~--~v~~~~~~~~~~l~~~~~---------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
..+.. ... .-.++...++++++.|+. -..+.+||+.+..-...-.......-.+++.. +++.++.|+
T Consensus 131 ~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 131 HTKPS-MLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp EEECC-CSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred EeCCC-CcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeC
Confidence 33322 111 111222346667777653 34588999887643322111111011222222 666677766
Q ss_pred CC-----CcEEEEeCCCc
Q 028802 143 HD-----SMLKLWDLDDI 155 (203)
Q Consensus 143 ~d-----~~i~iwd~~~~ 155 (203)
.+ ..+.+||+.+.
T Consensus 209 ~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EETTEEBCCEEEEETTTT
T ss_pred CCCCCCCceEEEeeCCCC
Confidence 43 35888888764
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.82 E-value=0.15 Score=41.56 Aligned_cols=151 Identities=8% Similarity=-0.096 Sum_probs=87.3
Q ss_pred cccccCCEEEEE-cCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCC-EEEEecCCCeEEEEEcCCccccceeeecC
Q 028802 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (203)
Q Consensus 2 ~~sp~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 79 (203)
+|++.+..|+.+ ...+.|+.+++........+...-.....+++.+.+. ++++-...+.|.+.++.. .....+...
T Consensus 355 d~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G--~~~~~l~~~ 432 (619)
T 3s94_A 355 DYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG--TMRKILISE 432 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEECT
T ss_pred EEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC--CeEEEEEEC
Confidence 455544444433 3456777777665333223333334566889887444 445555678899998863 333333320
Q ss_pred CCCceeEE-EeeCCCEEEEEcC--CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe-CCCcEEEEeCCCc
Q 028802 80 SPNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDDI 155 (203)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~--dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 155 (203)
.-.....+ +.|....|+.... ...|...++. |.....+....-.....+++++++..|+.+. ..+.|..+++...
T Consensus 433 ~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 433 DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-GSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-CCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence 33456777 7887555555543 3566666654 3333333221122678899999777776655 5577888887654
No 312
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.0079 Score=45.20 Aligned_cols=144 Identities=12% Similarity=0.120 Sum_probs=82.7
Q ss_pred CCEEEEEcCCCeEEEEEcCCCeEEEeecCCc-ccEEEEEEe--e-CCCEEEEe-cCCCeEEEEEcCCccccceeeec---
Q 028802 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLM--K-NGRKVVCG-SQSGTVLLYSWGYFKDCSDRFVG--- 78 (203)
Q Consensus 7 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~l~~~--~-~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~--- 78 (203)
+.++++++.||.|+-+|..+|+.+..+.... .++....-. + ++..++.. ..||.|+.++... +.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEEeeeccccc
Confidence 3478889999999999999999999887541 233221100 1 22333333 5799999998764 322222211
Q ss_pred CCCCceeE----EE-e----eCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcc------eEEEEEe-----CCCCeE
Q 028802 79 LSPNSVDA----LL-K----LDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYP------IESLALS-----HDRKFL 138 (203)
Q Consensus 79 ~~~~~v~~----~~-~----~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~------i~~~~~~-----~~~~~l 138 (203)
....++.. +. . ..+..+++++.+|.+...|+.+|+.+..+....... ..|.... ..+..|
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 00111110 00 0 145678899999999999999999998886542100 0011111 123566
Q ss_pred EEEeCCCcEEEEe
Q 028802 139 GSISHDSMLKLWD 151 (203)
Q Consensus 139 ~~~~~d~~i~iwd 151 (203)
+.+..+..+.+.+
T Consensus 169 ~ig~~~y~v~~~~ 181 (339)
T 2be1_A 169 VIGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEEECEECC
T ss_pred EEecceEEEEEEC
Confidence 6767666777766
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.78 E-value=0.067 Score=39.12 Aligned_cols=143 Identities=10% Similarity=0.069 Sum_probs=73.9
Q ss_pred cCCEEEEEcCC------CeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecC---------CCeEEEEEcCC
Q 028802 6 DAMKLLGTSGD------GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQ---------SGTVLLYSWGY 68 (203)
Q Consensus 6 ~~~~l~~~~~d------~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~---------d~~i~v~d~~~ 68 (203)
++++++.|+.+ ..+.+||+.+..-.. .+......- +++ .-++..++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEE-EECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 45566666654 458899988764322 222111111 122 236666666654 34588888864
Q ss_pred ccccceeeecCCCCc--eeEEEeeCCCEEEEEcCC-----CcEEEEEccCCceeeeeccCC-CcceEEEEEeCCCCeEEE
Q 028802 69 FKDCSDRFVGLSPNS--VDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGS 140 (203)
Q Consensus 69 ~~~~~~~~~~~~~~~--v~~~~~~~~~~l~~~~~d-----g~v~v~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~ 140 (203)
..+..+.. ...+ -.++..-++++++.|+.+ ..+.+||+.+.+-...-.... ......+.+ ++..++.
T Consensus 179 --~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 253 (306)
T 3ii7_A 179 --ETWTELCP-MIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVL 253 (306)
T ss_dssp --TEEEEECC-CSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEE
T ss_pred --CeEEECCC-ccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEE
Confidence 23333322 1111 112223366677777653 458899988764332211111 111222223 6677777
Q ss_pred EeCC-----CcEEEEeCCCc
Q 028802 141 ISHD-----SMLKLWDLDDI 155 (203)
Q Consensus 141 ~~~d-----~~i~iwd~~~~ 155 (203)
|+.+ ..+.+||+.+.
T Consensus 254 GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 254 AGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp ECBCSSSBCCEEEEEETTTT
T ss_pred eCcCCCeeeeeEEEEcCCCC
Confidence 7743 45888888764
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.76 E-value=0.092 Score=38.21 Aligned_cols=145 Identities=7% Similarity=-0.050 Sum_probs=74.7
Q ss_pred cCCEEEEEcCC-----CeEEEEEcCCCe-----EEEeecCCcccEEEEEEeeCCCEEEEecCC-----CeEEEEEcCCcc
Q 028802 6 DAMKLLGTSGD-----GTLSVCNLRKNT-----VQTRSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFK 70 (203)
Q Consensus 6 ~~~~l~~~~~d-----~~i~v~d~~~~~-----~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d-----~~i~v~d~~~~~ 70 (203)
+++.++.|+.+ ..+.+||+.+.. .+..+.........+ ..++..++.|+.+ ..+.+||+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~d~~~-- 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT--TLGDMIYVSGGFDGSRRHTSMERYDPNI-- 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCEEEEEETTT--
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE--EECCEEEEEcccCCCcccceEEEEcCCC--
Confidence 45566666643 468899987654 222222222222222 2366677777643 3688888763
Q ss_pred ccceeeecCCCC--ceeEEEeeCCCEEEEEcCC-----CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeC
Q 028802 71 DCSDRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISH 143 (203)
Q Consensus 71 ~~~~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 143 (203)
..+..+.. ... .-.++...++++++.|+.+ ..+.+||+.+.+-...-.......-.+++ ..++..++.|+.
T Consensus 138 ~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~ 215 (301)
T 2vpj_A 138 DQWSMLGD-MQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVA-LLNDHIYVVGGF 215 (301)
T ss_dssp TEEEEEEE-CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCB
T ss_pred CeEEECCC-CCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEE-EECCEEEEEeCC
Confidence 23333322 111 1112233467777777654 45889998876543221111110111222 225667777765
Q ss_pred C-----CcEEEEeCCCcc
Q 028802 144 D-----SMLKLWDLDDIL 156 (203)
Q Consensus 144 d-----~~i~iwd~~~~~ 156 (203)
+ ..+.+||+.+..
T Consensus 216 ~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCc
Confidence 3 468899987653
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.71 E-value=0.061 Score=39.56 Aligned_cols=144 Identities=9% Similarity=-0.059 Sum_probs=72.3
Q ss_pred cCCEEEEEcCC--------CeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecC------CCeEEEEEcCCc
Q 028802 6 DAMKLLGTSGD--------GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYF 69 (203)
Q Consensus 6 ~~~~l~~~~~d--------~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~------d~~i~v~d~~~~ 69 (203)
+++.++.|+.+ ..+.+||+.+.+-.. .+......- + +..-++..++.|+. -..+.+||..+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~-~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~- 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-T-VLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK- 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-E-EEEETTEEEEECCBCTTSCBCCCEEEEETTT-
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-e-EEEECCEEEEEeCCCCCCcccceEEEEeCCC-
Confidence 34455566532 458889988764322 222211111 1 22246667777765 24688898864
Q ss_pred cccceeeecCCCCc--eeEEEeeCCCEEEEEcCCC-----cEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 70 KDCSDRFVGLSPNS--VDALLKLDEDRVITGSENG-----LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 70 ~~~~~~~~~~~~~~--v~~~~~~~~~~l~~~~~dg-----~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
..+..+.. ...+ -.++...++++++.|+.++ .+.+||+.+.+-...-.......-.+++ .-+++.++.|+
T Consensus 175 -~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG 251 (315)
T 4asc_A 175 -FEWKELAP-MQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV-SLVGTLYAIGG 251 (315)
T ss_dssp -TEEEECCC-CSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEEEE
T ss_pred -CeEEECCC-CCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE-EECCEEEEECC
Confidence 23333322 1111 1122334677777777643 4888998876433221111110111222 22566777776
Q ss_pred CC--------------CcEEEEeCCCc
Q 028802 143 HD--------------SMLKLWDLDDI 155 (203)
Q Consensus 143 ~d--------------~~i~iwd~~~~ 155 (203)
.+ ..+.+||+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 252 FATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred ccccCcCCccccccccCcEEEecCCCC
Confidence 53 23677887654
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.62 E-value=0.018 Score=40.48 Aligned_cols=135 Identities=8% Similarity=-0.079 Sum_probs=75.2
Q ss_pred CEEEEEcCCCeEEEEEcCCCe------EEEee-cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc-cc---eee
Q 028802 8 MKLLGTSGDGTLSVCNLRKNT------VQTRS-EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CS---DRF 76 (203)
Q Consensus 8 ~~l~~~~~d~~i~v~d~~~~~------~~~~~-~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~---~~~ 76 (203)
.+|+....| ++++=....+. ....+ ++.-..+..++|+|++.+.++ .+|.++-.+..+... .. .+.
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~ 81 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK 81 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence 456666666 77766655432 11112 111246779999999987666 677766666532110 00 111
Q ss_pred ecC-CCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC-ceee----eeccCCC-cceEEEEEeCCCCeEEEEeCCCcEE
Q 028802 77 VGL-SPNSVDAL-LKLDEDRVITGSENGLISLVGILPN-RIIQ----PIAEHSE-YPIESLALSHDRKFLGSISHDSMLK 148 (203)
Q Consensus 77 ~~~-~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~-~~~~----~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~ 148 (203)
.+. .-....++ |.|+|.+.++ .||.|+-++..+. .... +..+... ..+..+.+.|+|...+.. |+.++
T Consensus 82 IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 82 IGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp EECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred ecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 110 01124667 7999988877 5698887775331 1110 1111101 258899999999877666 77754
Q ss_pred E
Q 028802 149 L 149 (203)
Q Consensus 149 i 149 (203)
-
T Consensus 158 r 158 (236)
T 1tl2_A 158 K 158 (236)
T ss_dssp E
T ss_pred e
Confidence 3
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.61 E-value=0.12 Score=37.88 Aligned_cols=144 Identities=8% Similarity=-0.027 Sum_probs=72.5
Q ss_pred cCCEEEEEcCC-----CeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecCC-----CeEEEEEcCCccccc
Q 028802 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFKDCS 73 (203)
Q Consensus 6 ~~~~l~~~~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~ 73 (203)
+++.++.|+.+ ..+.+||+.+..-.. .+......-..+. -++..++.|+.+ ..+.+||+.+ ..+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~--~~W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV--LNRLLYAVGGFDGTNRLNSAECYYPER--NEW 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTT--TEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE--ECCEEEEEeCCCCCCcCceEEEEeCCC--CeE
Confidence 45555665532 458888987764322 2222122112222 266677777654 4588888763 233
Q ss_pred eeeecCCCC--ceeEEEeeCCCEEEEEcCC-----CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC--
Q 028802 74 DRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD-- 144 (203)
Q Consensus 74 ~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 144 (203)
..+.. ... .-.++..-++.+++.|+.+ ..+.+||+.+.+-...-.......-.+++. -+++.++.|+.+
T Consensus 197 ~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~ 274 (308)
T 1zgk_A 197 RMITA-MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGH 274 (308)
T ss_dssp EECCC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSS
T ss_pred eeCCC-CCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCC
Confidence 32221 111 1112223366777777654 468999988764332211111101112222 256677777643
Q ss_pred ---CcEEEEeCCCc
Q 028802 145 ---SMLKLWDLDDI 155 (203)
Q Consensus 145 ---~~i~iwd~~~~ 155 (203)
..+.+||+.+.
T Consensus 275 ~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 275 TFLDSVECYDPDTD 288 (308)
T ss_dssp CBCCEEEEEETTTT
T ss_pred cccceEEEEcCCCC
Confidence 35778887654
No 318
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.52 E-value=0.019 Score=45.88 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=67.7
Q ss_pred cEEEEEEeeCCCEEEEecC-CCeEEEEEcCCccc-----c-------ceeeecCCCCceeEEEeeCCCEEEEEcCCCcEE
Q 028802 39 ELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKD-----C-------SDRFVGLSPNSVDALLKLDEDRVITGSENGLIS 105 (203)
Q Consensus 39 ~i~~l~~~~~~~~l~~~~~-d~~i~v~d~~~~~~-----~-------~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~ 105 (203)
....+..+|||+++++++. +.++.++|+..... . ...... ..++....|.++|.-..+...|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecceEE
Confidence 3567889999999887765 78999999973111 1 112222 34455555999996666667899999
Q ss_pred EEEccCC----------ceeeeeccCCCcceEEEEE------eCCCCeEEEEe
Q 028802 106 LVGILPN----------RIIQPIAEHSEYPIESLAL------SHDRKFLGSIS 142 (203)
Q Consensus 106 v~d~~~~----------~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~ 142 (203)
.|++... ..+..+..|.+ +-.+.- .|+|++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Yq--pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQ--PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSC--EEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccC--CcccccCCCccCCCCccEEEEec
Confidence 9998753 45666766643 444433 57888888876
No 319
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.48 E-value=0.15 Score=37.57 Aligned_cols=146 Identities=12% Similarity=0.042 Sum_probs=69.9
Q ss_pred cCCEEEEEcCC-------CeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecC------CCeEEEEEcCCcccc
Q 028802 6 DAMKLLGTSGD-------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYFKDC 72 (203)
Q Consensus 6 ~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~ 72 (203)
+++.++.|+.+ ..+.+||+.+.+-...-..........+...++..++.|+. ...+.+||+.+ ..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKK--GD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTT--TE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCC--CE
Confidence 44555666543 35788888776432211111111111122246667677664 24588899864 23
Q ss_pred ceeeecCCCC--ceeEEEeeCCCEEEEEcCC-----CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC-
Q 028802 73 SDRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD- 144 (203)
Q Consensus 73 ~~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d- 144 (203)
+..+.. ... .-.++..-++++++.|+.+ ..+.+||+.+.+-...-.......-.+++ ..++..++.|+.+
T Consensus 187 W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 187 WKDLAP-MKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV-SLAGSLYAIGGFAM 264 (318)
T ss_dssp EEEECC-CSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-EETTEEEEECCBCC
T ss_pred EEECCC-CCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-EECCEEEEECCeec
Confidence 333322 111 1112223466777777643 34778898776433221111110111222 2355666666643
Q ss_pred -------------CcEEEEeCCCc
Q 028802 145 -------------SMLKLWDLDDI 155 (203)
Q Consensus 145 -------------~~i~iwd~~~~ 155 (203)
..+.+||+.+.
T Consensus 265 ~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 265 IQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp BC----CCBCCBCCCEEEEETTTT
T ss_pred cCCCCceeccceeeeEEEEeCCCC
Confidence 34667776553
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.46 E-value=0.15 Score=37.07 Aligned_cols=144 Identities=10% Similarity=0.008 Sum_probs=72.5
Q ss_pred cCCEEEEEcCC-----CeEEEEEcCCCeEE--EeecCCcccEEEEEEeeCCCEEEEecCCC-----eEEEEEcCCccccc
Q 028802 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQSG-----TVLLYSWGYFKDCS 73 (203)
Q Consensus 6 ~~~~l~~~~~d-----~~i~v~d~~~~~~~--~~~~~~~~~i~~l~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~ 73 (203)
++..++.|+.+ ..+.+||..+.+-. ..+........ ++ .-++..++.|+.++ .+.+||+.+ ..+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~--~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLG-AA-VLNGLLYAVGGFDGSTGLSSVEAYNIKS--NEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE-EE-EETTEEEEEEEECSSCEEEEEEEEETTT--TEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceE-EE-EECCEEEEEcCCCCCccCceEEEEeCCC--CeE
Confidence 44556666543 35888998876432 22222222211 22 23666777776543 577788753 233
Q ss_pred eeeecCCCCc--eeEEEeeCCCEEEEEcCC-------CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCC
Q 028802 74 DRFVGLSPNS--VDALLKLDEDRVITGSEN-------GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (203)
Q Consensus 74 ~~~~~~~~~~--v~~~~~~~~~~l~~~~~d-------g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 144 (203)
..+.. ...+ -.++...++++++.|+.+ ..+.+||+.+.+-...-.......-.+++ ..++..++.|+.+
T Consensus 137 ~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 137 FHVAP-MNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG-VLNNLLYAVGGHD 214 (302)
T ss_dssp EEECC-CSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBS
T ss_pred eecCC-CCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEE-EECCEEEEECCCC
Confidence 33322 1111 112223466677776542 35889998876433221111110111222 2256677777654
Q ss_pred -----CcEEEEeCCCc
Q 028802 145 -----SMLKLWDLDDI 155 (203)
Q Consensus 145 -----~~i~iwd~~~~ 155 (203)
..+.+||+.+.
T Consensus 215 ~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTN 230 (302)
T ss_dssp SSSBCCCEEEEETTTT
T ss_pred CCcccceEEEEeCCCC
Confidence 36888988764
No 321
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.39 E-value=0.19 Score=37.32 Aligned_cols=109 Identities=8% Similarity=-0.037 Sum_probs=61.6
Q ss_pred CCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCc
Q 028802 35 FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR 113 (203)
Q Consensus 35 ~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~ 113 (203)
.....+..+.+.+++.+++++...+.++-.|- .+.....+.......+..+ +.+++.++ .++.+|.+++.....++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~--gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~ 236 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP--GQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE 236 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECT--TCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCC--CCCceeECCCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence 33456889999998888877654443333332 1233333322134456667 67887665 44557777766422233
Q ss_pred eeeeeccC---CCcceEEEEEeCCCCeEEEEeCCCcE
Q 028802 114 IIQPIAEH---SEYPIESLALSHDRKFLGSISHDSML 147 (203)
Q Consensus 114 ~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i 147 (203)
.-..+... ....+.++.+.+++..++++. ++.|
T Consensus 237 tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 237 NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp EECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred eeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 32222211 122588899998877666554 6666
No 322
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.38 E-value=0.35 Score=40.36 Aligned_cols=140 Identities=12% Similarity=0.114 Sum_probs=79.7
Q ss_pred EEEEcCCCeEEEEEcCCCeEEEee---cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeee--cCCCCce
Q 028802 10 LLGTSGDGTLSVCNLRKNTVQTRS---EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV--GLSPNSV 84 (203)
Q Consensus 10 l~~~~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~--~~~~~~v 84 (203)
|..|+.++-|.+|+..++...... ......|.++...+++.+.+ |+..+-+..++..+. ....+. ......|
T Consensus 376 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~v 452 (781)
T 3v9f_A 376 LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLK--KFQIIELEKNELLDV 452 (781)
T ss_dssp EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSC--EEEECCSTTTCCCCE
T ss_pred EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCC--cEEEeccCCCCCCeE
Confidence 444554556888887654332211 12235688888777776544 666566888887532 222222 1023567
Q ss_pred eEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccC----CCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 85 DAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEH----SEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 85 ~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
.++ ..+++. |..|+. +-|.+|+..+++........ ....|.++...++|+..+ ++..+-|..|+..+.
T Consensus 453 ~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 453 RVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp EEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred EEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence 777 455665 445555 45888998766543222111 023688998888887554 444344777887654
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.34 E-value=0.2 Score=37.73 Aligned_cols=102 Identities=14% Similarity=0.064 Sum_probs=57.8
Q ss_pred cccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc-cceee---ecCCCCceeEE-EeeC---CCEEEEEcC----C---
Q 028802 37 EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSDRF---VGLSPNSVDAL-LKLD---EDRVITGSE----N--- 101 (203)
Q Consensus 37 ~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~---~~~~~~~v~~~-~~~~---~~~l~~~~~----d--- 101 (203)
-.....|+|.|+++++++ ...+.|++++.. +. .+..+ .. .......+ ++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~--G~~~~~~~~v~~~-g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPS--GKKLVASFDVANV-GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSS--CEEEEEECCCCCS-TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC--CceEeeccceeec-CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 345789999999985554 556999988732 22 12111 11 22446667 8887 555555433 2
Q ss_pred -CcEEEEEccCC-------cee-eeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 102 -GLISLVGILPN-------RII-QPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 102 -g~v~v~d~~~~-------~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
..|..|+.... +.+ ..+..........++|.|||..+++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56777776543 111 112211111245689999998666643
No 324
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.31 E-value=0.17 Score=38.00 Aligned_cols=115 Identities=12% Similarity=0.120 Sum_probs=65.0
Q ss_pred cccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceee---ecCCCCceeEE-EeeC---CCEEEEEcC-C-----Cc
Q 028802 37 EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF---VGLSPNSVDAL-LKLD---EDRVITGSE-N-----GL 103 (203)
Q Consensus 37 ~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~v~~~-~~~~---~~~l~~~~~-d-----g~ 103 (203)
-...+.++|.|+|+++++ ...+.|.+++ ......+..+ .. .......+ ++|+ +..|+++.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~-g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHR-GESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCS-TTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecceEeec-CCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345679999999985555 5569999988 3211111111 11 23446667 8888 555555443 2 56
Q ss_pred EEEEEccCCc-----ee-eeecc--CCCcceEEEEEeCCCCeEEEEeC-------------CCcEEEEeCCC
Q 028802 104 ISLVGILPNR-----II-QPIAE--HSEYPIESLALSHDRKFLGSISH-------------DSMLKLWDLDD 154 (203)
Q Consensus 104 v~v~d~~~~~-----~~-~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~ 154 (203)
|..++...+. .+ ..+.. ........++|.|+|..+++.+. .+.|.-++...
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 7778776431 11 11321 10112467999999976665432 24666666654
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.29 E-value=0.2 Score=36.71 Aligned_cols=144 Identities=7% Similarity=-0.028 Sum_probs=72.1
Q ss_pred cCCEEEEEcC-----C------CeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecCC--------CeEEEE
Q 028802 6 DAMKLLGTSG-----D------GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS--------GTVLLY 64 (203)
Q Consensus 6 ~~~~l~~~~~-----d------~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~d--------~~i~v~ 64 (203)
+++.++.|+. . ..+.+||..+++-.. .+....... +++ .-++..++.|+.+ ..+.+|
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF-GLG-EALNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC-EEE-EETTEEEEECCEESSTTCCBCCCEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce-eEE-EECCEEEEEeCCcCCCCCcccceEEEE
Confidence 5566666662 1 127788887764322 111111111 122 2256666666632 458888
Q ss_pred EcCCccccceeeecCCCCc--eeEEEeeCCCEEEEEcC------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC
Q 028802 65 SWGYFKDCSDRFVGLSPNS--VDALLKLDEDRVITGSE------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK 136 (203)
Q Consensus 65 d~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~l~~~~~------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (203)
|..+ ..+..+.. -..+ -.++...++++++.|+. -..+.+||+.+.+-...-.......-.+++ .-+++
T Consensus 123 d~~~--~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~ 198 (315)
T 4asc_A 123 DRLS--FKWGESDP-LPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT-VHDGR 198 (315)
T ss_dssp ETTT--TEEEECCC-CSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTE
T ss_pred CCCC--CcEeECCC-CCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE-EECCE
Confidence 8864 22333222 1111 11223456677777765 246889998876433221111110111222 22667
Q ss_pred eEEEEeCCC-----cEEEEeCCCc
Q 028802 137 FLGSISHDS-----MLKLWDLDDI 155 (203)
Q Consensus 137 ~l~~~~~d~-----~i~iwd~~~~ 155 (203)
.++.|+.++ .+.+||+.+.
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTTT
T ss_pred EEEEeccCCCCccceEEEEECCCC
Confidence 777777544 4788888765
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.29 E-value=0.17 Score=37.09 Aligned_cols=144 Identities=11% Similarity=-0.009 Sum_probs=72.1
Q ss_pred cCCEEEEEcC----C-----CeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecCC-----CeEEEEEcCCc
Q 028802 6 DAMKLLGTSG----D-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYF 69 (203)
Q Consensus 6 ~~~~l~~~~~----d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~d-----~~i~v~d~~~~ 69 (203)
++++++.|+. + ..+.+||+.+..-.. .+.........+. -++..++.|+.+ ..+.+||..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~- 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPER- 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTT-
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCC-
Confidence 4455566654 2 458888887764322 2222122222222 266677776643 4578888764
Q ss_pred cccceeeecCCCCc--eeEEEeeCCCEEEEEcCC-----CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 70 KDCSDRFVGLSPNS--VDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 70 ~~~~~~~~~~~~~~--v~~~~~~~~~~l~~~~~d-----g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
..+..+.. ...+ -.++..-++.+++.|+.+ ..+.+||+.+.+-...-.......-.+++.. ++..++.|+
T Consensus 147 -~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 223 (308)
T 1zgk_A 147 -DEWHLVAP-MLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGG 223 (308)
T ss_dssp -TEEEECCC-CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred -CeEeECCC-CCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeC
Confidence 22332221 1111 112223366777777654 4588999877643322111111011122222 666777776
Q ss_pred CC-----CcEEEEeCCCc
Q 028802 143 HD-----SMLKLWDLDDI 155 (203)
Q Consensus 143 ~d-----~~i~iwd~~~~ 155 (203)
.+ ..+.+||+.+.
T Consensus 224 ~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETE 241 (308)
T ss_dssp BCSSSBCCCEEEEETTTT
T ss_pred CCCCCccceEEEEeCCCC
Confidence 54 45889998765
No 327
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.10 E-value=0.27 Score=36.24 Aligned_cols=137 Identities=9% Similarity=0.077 Sum_probs=78.7
Q ss_pred ccccCCEEEEEc--CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCC--------------CeEEEEEc
Q 028802 3 FAADAMKLLGTS--GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS--------------GTVLLYSW 66 (203)
Q Consensus 3 ~sp~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d--------------~~i~v~d~ 66 (203)
|++++..|+... .++.|+..+...... ..+.. .. +--+++++.+|+.+... ..|+..++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~-~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNI-HKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSC-EEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCC-EEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 456777776653 356677777654332 22222 11 23457899998877653 24555555
Q ss_pred CCccccceeeecCCCCceeEEEeeCCCEEEEEc----CCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 67 GYFKDCSDRFVGLSPNSVDALLKLDEDRVITGS----ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~----~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
. +.....+.. ... ..+++++..|+... ....|+..++.. .....+..+ . + ..++|+++.|+..+
T Consensus 96 d--g~~~~~l~~-~~~---~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~-~--~--~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 96 N--GHGSTVLDP-DPC---IYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNH-Y--L--FTCNTSDRYFYYNN 163 (302)
T ss_dssp T--SCCCEEEEC-SCE---EEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESS-C--C--CCSEEETTEEEEEC
T ss_pred C--CCcceEeec-CCc---cEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCC-C--c--eEeeEECCEEEEEe
Confidence 4 333333433 211 13688999999876 234566666653 334445444 2 2 35678888887665
Q ss_pred C-CCcEEEEeCCCcc
Q 028802 143 H-DSMLKLWDLDDIL 156 (203)
Q Consensus 143 ~-d~~i~iwd~~~~~ 156 (203)
. ...|.+-++.+..
T Consensus 164 ~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 164 PKNGQLYRYDTASQS 178 (302)
T ss_dssp TTTCCEEEEETTTTE
T ss_pred CCCceEEEEECCCCC
Confidence 4 5678887776654
No 328
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.77 E-value=0.38 Score=35.85 Aligned_cols=137 Identities=8% Similarity=-0.015 Sum_probs=64.1
Q ss_pred CeEEEEEcCCCeE--EEeecCCcccEEEEEEeeCCCEEEEecC------CCeEEEEEcCCccccceeeecC--CCCcee-
Q 028802 17 GTLSVCNLRKNTV--QTRSEFSEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYFKDCSDRFVGL--SPNSVD- 85 (203)
Q Consensus 17 ~~i~v~d~~~~~~--~~~~~~~~~~i~~l~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~--~~~~v~- 85 (203)
..+.+||+.+..- +..+......-.+++. -++..++.|+. ...+.+||+......+..+... ......
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 5788999887642 2233221111022222 25666666653 3457778762222333333220 111111
Q ss_pred EEEeeCCCEEEEEcCC----------------------CcEEEEEccCCce--eeeeccCCCcceEEEEEeCCCCeEEEE
Q 028802 86 ALLKLDEDRVITGSEN----------------------GLISLVGILPNRI--IQPIAEHSEYPIESLALSHDRKFLGSI 141 (203)
Q Consensus 86 ~~~~~~~~~l~~~~~d----------------------g~v~v~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~ 141 (203)
++...++.+++.|+.+ ..+.+||+.+.+- +..+... . ....+...+++.++.|
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r--~~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG-R--AYGVSLPWNNSLLIIG 323 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC-C--BSSEEEEETTEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC-c--ccceeEEeCCEEEEEe
Confidence 1234566777777632 2477899876543 2223222 1 1122233467778888
Q ss_pred eCCC------cEEEEeCCCccc
Q 028802 142 SHDS------MLKLWDLDDILK 157 (203)
Q Consensus 142 ~~d~------~i~iwd~~~~~~ 157 (203)
+.++ .|.++++++.+.
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCSC
T ss_pred eeCCCCCEeeeEEEEEEcCcEe
Confidence 8543 355567766543
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.77 E-value=0.38 Score=35.30 Aligned_cols=144 Identities=8% Similarity=-0.017 Sum_probs=70.9
Q ss_pred cCCEEEEEcC----CC-------eEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecCC-------CeEEEEE
Q 028802 6 DAMKLLGTSG----DG-------TLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-------GTVLLYS 65 (203)
Q Consensus 6 ~~~~l~~~~~----d~-------~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~d-------~~i~v~d 65 (203)
++..++.|+. ++ .+.+||..+.+-.. .+....... +++. -++..++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF-GLGE-VDDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC-EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc-ceEE-ECCEEEEEcCccCCCCcccceEEEEe
Confidence 5566677762 11 27788887764322 122111111 2222 256667777653 3577888
Q ss_pred cCCccccceeeecCCCCce--eEEEeeCCCEEEEEcC------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCe
Q 028802 66 WGYFKDCSDRFVGLSPNSV--DALLKLDEDRVITGSE------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF 137 (203)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~l~~~~~------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 137 (203)
..+ ..+..+.. ...+. .++...++.+++.|+. -..+.+||+.+.+-...-.......-.+++. -++..
T Consensus 134 ~~~--~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i 209 (318)
T 2woz_A 134 PVA--AKWSEVKN-LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKI 209 (318)
T ss_dssp TTT--TEEEEECC-CSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEE
T ss_pred CCC--CCEeECCC-CCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEE
Confidence 753 23333322 11111 1223356777777764 2358899988765332211111111122222 25667
Q ss_pred EEEEeCC-----CcEEEEeCCCc
Q 028802 138 LGSISHD-----SMLKLWDLDDI 155 (203)
Q Consensus 138 l~~~~~d-----~~i~iwd~~~~ 155 (203)
++.|+.+ ..+.+||+.+.
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTC
T ss_pred EEEcCcCCCCccceEEEEECCCC
Confidence 7777643 34678887665
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.38 E-value=0.6 Score=35.01 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=86.7
Q ss_pred cccCCEEEEEc-------CCCeEEEEEcCCCeEEEeecCCcccEEEEEEee--CC-CEEEEecC---CCeEEEEEcCCc-
Q 028802 4 AADAMKLLGTS-------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NG-RKVVCGSQ---SGTVLLYSWGYF- 69 (203)
Q Consensus 4 sp~~~~l~~~~-------~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~--~~-~~l~~~~~---d~~i~v~d~~~~- 69 (203)
+++.+.++..+ -.|.+.+|..+.+ .-+.+++|......+.+.. .. ..++.+.. .+.+++-++...
T Consensus 160 d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~ 238 (365)
T 2xzh_A 160 DAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP 238 (365)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCC
T ss_pred CCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCC
Confidence 56667654332 1367889998765 4466777765543333221 11 12333322 257888888532
Q ss_pred -cc------cceeeec--CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEE
Q 028802 70 -KD------CSDRFVG--LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLG 139 (203)
Q Consensus 70 -~~------~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (203)
+. ....+.. ....-.-++ .++....++..+.-|.|++||++++.++..-+-..+ .|...+.+....=++
T Consensus 239 ~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d-~iF~ta~~~~~~Gi~ 317 (365)
T 2xzh_A 239 TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE-TIFVTAPHEATAGII 317 (365)
T ss_dssp TTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEEEGGGTEEE
T ss_pred CCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC-ceEEecccCCCCcEE
Confidence 11 1111111 011122334 688888999999999999999999999977665544 676656555544555
Q ss_pred EEeCCCcEEEEeCC
Q 028802 140 SISHDSMLKLWDLD 153 (203)
Q Consensus 140 ~~~~d~~i~iwd~~ 153 (203)
.....|.+.--.+.
T Consensus 318 ~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 318 GVNRKGQVLSVCVE 331 (365)
T ss_dssp EEETTCEEEEEEEC
T ss_pred EEcCCCEEEEEEEC
Confidence 55577776655543
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.26 E-value=0.77 Score=37.97 Aligned_cols=147 Identities=11% Similarity=0.065 Sum_probs=76.5
Q ss_pred cCCEEEEEcCC------CeEEEEEcCCCeEEE--eecCCcccEEEEEEeeCCCEEEEecCCC--eEEEEEcCCcccccee
Q 028802 6 DAMKLLGTSGD------GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFKDCSDR 75 (203)
Q Consensus 6 ~~~~l~~~~~d------~~i~v~d~~~~~~~~--~~~~~~~~i~~l~~~~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~ 75 (203)
+++.++.|+.+ ..+.+||..+..-.. .+...... .+++...++..++.|+.++ .+.+||..+ ..+..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t--~~W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTE--EIFKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTT--TEEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCC--CceEE
Confidence 56666676643 357888988753322 22211111 1222224778888887654 688999864 23333
Q ss_pred eecC-----CCCceeEE-EeeC-CCEEEEEcC--C-----CcEEEEEccCCce-----eeeec---cCCCcceEEEEEeC
Q 028802 76 FVGL-----SPNSVDAL-LKLD-EDRVITGSE--N-----GLISLVGILPNRI-----IQPIA---EHSEYPIESLALSH 133 (203)
Q Consensus 76 ~~~~-----~~~~v~~~-~~~~-~~~l~~~~~--d-----g~v~v~d~~~~~~-----~~~~~---~~~~~~i~~~~~~~ 133 (203)
+... ......++ +... +.+++.|+. + ..+.+||+.+... ...+. ....... +++...
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~ 606 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYIT 606 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEE
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeC
Confidence 2210 11122223 4444 667777765 2 4588999987661 11111 1111112 233333
Q ss_pred CCCeEEEEeC--------CCcEEEEeCCCcc
Q 028802 134 DRKFLGSISH--------DSMLKLWDLDDIL 156 (203)
Q Consensus 134 ~~~~l~~~~~--------d~~i~iwd~~~~~ 156 (203)
++..++.|+. ...|.+||+.+..
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 3677777774 2458888887653
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.02 E-value=1.7 Score=38.27 Aligned_cols=130 Identities=8% Similarity=0.058 Sum_probs=75.4
Q ss_pred eEEEEEcCCCeEEEeecCC-cccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc--ceeeecCCCCceeEE-EeeC--
Q 028802 18 TLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC--SDRFVGLSPNSVDAL-LKLD-- 91 (203)
Q Consensus 18 ~i~v~d~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~~~v~~~-~~~~-- 91 (203)
.|++++......+...... ...|...+.+ +.+++.++ .+.+.++.+.. +.. ..... -...+.|+ +.|.
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~-~~L~~~~~~~--l~~evscl~i~~~~~ 566 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHP-QELRQISHTE--MEHEVACLDITPLGD 566 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEET-TEEEEEEEEE--CSSCEEEEECCCCSS
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeC-CceeeecccC--CCCceEEEEeecCCC
Confidence 3556665444444444432 2345555443 34666664 67788887753 221 11112 34568888 5542
Q ss_pred ----CCEEEEEcC-CCcEEEEEccCCceeeeeccCCCcceEEEEEeC--CCCeEEEEeCCCcEEEEeCC
Q 028802 92 ----EDRVITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLALSH--DRKFLGSISHDSMLKLWDLD 153 (203)
Q Consensus 92 ----~~~l~~~~~-dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~ 153 (203)
+.+++.|.. |++|+++++.+.+.+............++.+.. ...+|..|-.||.+..+.+.
T Consensus 567 ~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 567 SNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp STTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 478999997 999999999876655443322112344554432 33577888899998766553
No 333
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.80 E-value=0.92 Score=34.04 Aligned_cols=144 Identities=10% Similarity=0.115 Sum_probs=89.6
Q ss_pred ccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCC
Q 028802 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPN 82 (203)
Q Consensus 3 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 82 (203)
.+|..+.||.-. ..+|.++|+++...+....-. ..|..=.|-.... |+..+ +..|+-|++.....+.+.+.. |..
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR-~~~ 148 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDR-HSS 148 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEEC-CGG
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeec-chh
Confidence 467778777655 588999999999887777653 4566667765443 33332 467999999754566666654 432
Q ss_pred ----ceeEE-EeeCCCEEEEEcC-------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC-----eEEEEeC--
Q 028802 83 ----SVDAL-LKLDEDRVITGSE-------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-----FLGSISH-- 143 (203)
Q Consensus 83 ----~v~~~-~~~~~~~l~~~~~-------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~l~~~~~-- 143 (203)
.|..- .+++.++++..+- .|.+.+|..+. +..+.+.+|.. .-..+-.+|. .++.+..
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa---~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA---SFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEE---EEEEECCTTCSSCEEEEEEEEEET
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeee---eeEEEecCCCCCCceEEEEEEecC
Confidence 22222 4778888775542 36788998764 55567888732 2233433332 2333322
Q ss_pred -CCcEEEEeCCCc
Q 028802 144 -DSMLKLWDLDDI 155 (203)
Q Consensus 144 -d~~i~iwd~~~~ 155 (203)
.+.++|-++...
T Consensus 225 ~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 225 AGGKLHIIEVGTP 237 (365)
T ss_dssp TEEEEEEEECSSC
T ss_pred CCcEEEEEEcCCC
Confidence 258999998544
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.32 E-value=1.2 Score=33.46 Aligned_cols=109 Identities=9% Similarity=0.015 Sum_probs=59.9
Q ss_pred ecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc-cceee----ecCCCCceeEE-EeeC---CCEEEEE---cC
Q 028802 33 SEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSDRF----VGLSPNSVDAL-LKLD---EDRVITG---SE 100 (203)
Q Consensus 33 ~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~----~~~~~~~v~~~-~~~~---~~~l~~~---~~ 100 (203)
+...-...+.|+|.|+|.++++--..|.|++++...... .+..+ .. .......+ ++|+ ...|++. ..
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~-g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPS-GEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCB-TTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeec-CCCCceeeEeccccccCCEEEEEEecCC
Confidence 333345678999999999877766589999887542111 11111 12 24456667 8885 3444432 23
Q ss_pred CCcEEEEEccCC----------cee-eeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 101 NGLISLVGILPN----------RII-QPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 101 dg~v~v~d~~~~----------~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
...|.-|.+..+ +.+ ..+..........|+|.|||.++++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 445655655431 111 112211011245689999998766654
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.32 E-value=1.5 Score=34.34 Aligned_cols=148 Identities=15% Similarity=0.087 Sum_probs=89.0
Q ss_pred cccCCEEEEEc-------CCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCC---CEEEEecC---CCeEEEEEcCCc-
Q 028802 4 AADAMKLLGTS-------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG---RKVVCGSQ---SGTVLLYSWGYF- 69 (203)
Q Consensus 4 sp~~~~l~~~~-------~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~~---d~~i~v~d~~~~- 69 (203)
+++.+.++..+ -.|.+.+|..+.+ .-+.+++|......+....+. ..+..+.. .+.+++-++...
T Consensus 159 d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~ 237 (494)
T 1bpo_A 159 DAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP 237 (494)
T ss_dssp CTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCC
T ss_pred CCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCc
Confidence 56677654332 1367889998765 446677876655444332111 23333333 378888888542
Q ss_pred -cc------cceeeec--CCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEE
Q 028802 70 -KD------CSDRFVG--LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLG 139 (203)
Q Consensus 70 -~~------~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 139 (203)
+. .+..+.. ....-.-++ .++....++..+.-|.|++||++++.++..-+-..+ .|..-+.+....=++
T Consensus 238 ~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~-~iF~t~~~~~~~Gi~ 316 (494)
T 1bpo_A 238 TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE-TIFVTAPHEATAGII 316 (494)
T ss_dssp TTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEEETTTTEEE
T ss_pred cCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCC-ceEEecccCCCCcEE
Confidence 11 1111111 011123334 688888999999999999999999999877665534 676656655555566
Q ss_pred EEeCCCcEEEEeCC
Q 028802 140 SISHDSMLKLWDLD 153 (203)
Q Consensus 140 ~~~~d~~i~iwd~~ 153 (203)
.....|.|.--.+.
T Consensus 317 ~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 317 GVNRKGQVLSVCVE 330 (494)
T ss_dssp EEETTCEEEEEEEC
T ss_pred EEccCceEEEEEEc
Confidence 66677776655544
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.18 E-value=2 Score=35.47 Aligned_cols=148 Identities=8% Similarity=0.043 Sum_probs=78.3
Q ss_pred cCCEEEEEcCC----CeEEEEEcCCCeEEEee-c-----CCcc-cEEEEEEee-CCCEEEEecCC------CeEEEEEcC
Q 028802 6 DAMKLLGTSGD----GTLSVCNLRKNTVQTRS-E-----FSEE-ELTSVVLMK-NGRKVVCGSQS------GTVLLYSWG 67 (203)
Q Consensus 6 ~~~~l~~~~~d----~~i~v~d~~~~~~~~~~-~-----~~~~-~i~~l~~~~-~~~~l~~~~~d------~~i~v~d~~ 67 (203)
++..++.|+.+ ..+.+||..++.-...- . .... .-.+++..+ ++..++.|+.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 45566666642 46888998776432211 1 1111 112333333 67777777653 357788876
Q ss_pred CccccceeeecC--CCCceeEEEeeCCCEEEEEcCCC--cEEEEEccCCceeeee-----ccCCCcceEEEEEeCC-CCe
Q 028802 68 YFKDCSDRFVGL--SPNSVDALLKLDEDRVITGSENG--LISLVGILPNRIIQPI-----AEHSEYPIESLALSHD-RKF 137 (203)
Q Consensus 68 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~dg--~v~v~d~~~~~~~~~~-----~~~~~~~i~~~~~~~~-~~~ 137 (203)
+ ..+..+... ......++.-.++.+++.|+.++ .+.+||+.+..-...- ... .....++.+..+ +..
T Consensus 477 t--~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~-r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 477 T--REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQN-SLVSAGLEFDPVSKQG 553 (695)
T ss_dssp T--TEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGS-CCBSCEEEEETTTTEE
T ss_pred C--CcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCc-ccceeEEEEeCCCCEE
Confidence 4 233332220 11111222224788888887654 6899998876533221 111 112233556655 566
Q ss_pred EEEEeC--C-----CcEEEEeCCCcc
Q 028802 138 LGSISH--D-----SMLKLWDLDDIL 156 (203)
Q Consensus 138 l~~~~~--d-----~~i~iwd~~~~~ 156 (203)
++.|+. + ..+.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 677765 2 358888987654
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.16 E-value=1.3 Score=32.99 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=25.1
Q ss_pred CeEEEEEcCCccccceeeecCCCC--ce-eEEEeeCCCEEEEEcC------CCcEEEEEc
Q 028802 59 GTVLLYSWGYFKDCSDRFVGLSPN--SV-DALLKLDEDRVITGSE------NGLISLVGI 109 (203)
Q Consensus 59 ~~i~v~d~~~~~~~~~~~~~~~~~--~v-~~~~~~~~~~l~~~~~------dg~v~v~d~ 109 (203)
..+.+||..+ ..+..+.. -.. .. .++...++.+++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~--~~W~~~~~-~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPST--QQWSYAGE-SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTT--TEEEEEEE-CSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCC--CcEEECCC-CCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 5788899864 33333322 111 11 2233346666777653 345777876
No 338
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.06 E-value=1.4 Score=33.22 Aligned_cols=130 Identities=8% Similarity=0.082 Sum_probs=76.4
Q ss_pred CCeEEEEEcCC--Ce--EEEeecCC-cccEEEEEEeeCCCEEEEec-----------------CCCeEEEEEcCCccccc
Q 028802 16 DGTLSVCNLRK--NT--VQTRSEFS-EEELTSVVLMKNGRKVVCGS-----------------QSGTVLLYSWGYFKDCS 73 (203)
Q Consensus 16 d~~i~v~d~~~--~~--~~~~~~~~-~~~i~~l~~~~~~~~l~~~~-----------------~d~~i~v~d~~~~~~~~ 73 (203)
..+|.+|.+.. +. .+..+.+. -...+.+.+.++|.+.++.. ..|.++.++. +. +
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~---~~-~ 213 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP---ND-V 213 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT---TC-C
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC---Ce-E
Confidence 45677776653 22 23344332 24578999999998777654 1245555553 22 2
Q ss_pred eeeecCCCCceeEE-EeeCCCEEEEEc-CCCcEEEEEccC-Cce--eeeeccCCCcceEEEEEeC-CCCeEEEEeCC-Cc
Q 028802 74 DRFVGLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILP-NRI--IQPIAEHSEYPIESLALSH-DRKFLGSISHD-SM 146 (203)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~~~~l~~~~-~dg~v~v~d~~~-~~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d-~~ 146 (203)
..+.. .-.....+ |+|+++.++.+. ..+.|+.|++.. +.. ...+.. ....-.+++.+ +|++.+++..+ +.
T Consensus 214 ~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~--~g~PDGi~vD~e~G~lwva~~~~g~~ 290 (355)
T 3sre_A 214 RVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF--DTLVDNISVDPVTGDLWVGCHPNGMR 290 (355)
T ss_dssp EEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC--SSEEEEEEECTTTCCEEEEEESCHHH
T ss_pred EEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC--CCCCceEEEeCCCCcEEEEecCCceE
Confidence 23322 23445667 899998887765 478899999863 322 123322 22567789999 59877766533 34
Q ss_pred EEEEeC
Q 028802 147 LKLWDL 152 (203)
Q Consensus 147 i~iwd~ 152 (203)
|..|+.
T Consensus 291 v~~~~P 296 (355)
T 3sre_A 291 IFFYDA 296 (355)
T ss_dssp HHSCCT
T ss_pred EEEECC
Confidence 444443
No 339
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.70 E-value=1.3 Score=39.79 Aligned_cols=138 Identities=10% Similarity=0.147 Sum_probs=82.3
Q ss_pred CeEEEEEcCCC-eEEEeecCC----cccEEEEEEeeCCCEEEEec-------CCCeEEEEEcCCccccceeeecCCCCce
Q 028802 17 GTLSVCNLRKN-TVQTRSEFS----EEELTSVVLMKNGRKVVCGS-------QSGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (203)
Q Consensus 17 ~~i~v~d~~~~-~~~~~~~~~----~~~i~~l~~~~~~~~l~~~~-------~d~~i~v~d~~~~~~~~~~~~~~~~~~v 84 (203)
..|+.|++... .+...+..| ..+|..-..+++.++++..+ -.|.+.+|.+. ...-+.+.+ |.+..
T Consensus 125 ~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e--r~~sQ~ieg-ha~~F 201 (1630)
T 1xi4_A 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEG-HAASF 201 (1630)
T ss_pred CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc--cccchhhhH-hHhhh
Confidence 56788887532 333333333 45677777788888776432 35789999886 344556666 66555
Q ss_pred eEE-E--ee-CCCEEEEEcC---CCcEEEEEccCC---ceee------ee-c--cCCCcceEEEEEeCCCCeEEEEeCCC
Q 028802 85 DAL-L--KL-DEDRVITGSE---NGLISLVGILPN---RIIQ------PI-A--EHSEYPIESLALSHDRKFLGSISHDS 145 (203)
Q Consensus 85 ~~~-~--~~-~~~~l~~~~~---dg~v~v~d~~~~---~~~~------~~-~--~~~~~~i~~~~~~~~~~~l~~~~~d~ 145 (203)
..+ . .+ ...+++.+.. .+.++|.++... .+.. .+ . ...+++| ++..++.-..+...+.-|
T Consensus 202 ~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv-~~~vs~k~g~iy~itk~G 280 (1630)
T 1xi4_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYG 280 (1630)
T ss_pred heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcce-EEEeccccCEEEEEecCc
Confidence 444 2 12 2233333332 368999887532 1111 11 1 1123343 577777777788888899
Q ss_pred cEEEEeCCCcccC
Q 028802 146 MLKLWDLDDILKG 158 (203)
Q Consensus 146 ~i~iwd~~~~~~~ 158 (203)
.|++||+.|+..-
T Consensus 281 ~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 281 YIHLYDLETGTCI 293 (1630)
T ss_pred eEEEEecccchhh
Confidence 9999999998764
No 340
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.46 E-value=3.8 Score=36.15 Aligned_cols=141 Identities=14% Similarity=0.154 Sum_probs=77.6
Q ss_pred EEEEEcCCCeEEEEEcCCCeEEE-eecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-CCCCceeE
Q 028802 9 KLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPNSVDA 86 (203)
Q Consensus 9 ~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~ 86 (203)
+|++|- ...|++|++...+.+. ..... ..|..+.....++++++|..-..+.++..+.....+..+.. .....+++
T Consensus 897 ~Lla~i-g~~l~vy~l~~~~~L~~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta 974 (1158)
T 3ei3_A 897 KLLASI-NSTVRLYEWTTEKELRTECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA 974 (1158)
T ss_dssp EEEEEE-TTEEEEEEECTTSCEEEEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEE
T ss_pred EEEEEc-CCEEEEEECCCCceEEEEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEE
Confidence 444443 3789999998654332 11111 11223333345788999988777777655432333333332 13445666
Q ss_pred EEeeCCCEEEEEcCCCcEEEEEccCC--------ceeeeeccCCCcceEEEE---EeCC---------CCeEEEEeCCCc
Q 028802 87 LLKLDEDRVITGSENGLISLVGILPN--------RIIQPIAEHSEYPIESLA---LSHD---------RKFLGSISHDSM 146 (203)
Q Consensus 87 ~~~~~~~~l~~~~~dg~v~v~d~~~~--------~~~~~~~~~~~~~i~~~~---~~~~---------~~~l~~~~~d~~ 146 (203)
+..-+...++.+..+|.|.++..... +....-.-|.+..|+++. +.+. ...++.++.+|.
T Consensus 975 ~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~Gs 1054 (1158)
T 3ei3_A 975 VEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGM 1054 (1158)
T ss_dssp EEEEETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSC
T ss_pred EEEEccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCE
Confidence 62223457888899999998876431 111121223233577665 3332 234777888999
Q ss_pred EEEEe
Q 028802 147 LKLWD 151 (203)
Q Consensus 147 i~iwd 151 (203)
|-+.-
T Consensus 1055 Ig~l~ 1059 (1158)
T 3ei3_A 1055 IGLVT 1059 (1158)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.46 E-value=2.2 Score=33.35 Aligned_cols=104 Identities=9% Similarity=0.072 Sum_probs=57.2
Q ss_pred ccEEEEEEeeCCCEEEEecCCCeEEEEEcCCcccc--ceeeecC-----CCCceeEE-EeeC---CCEEEEEcC------
Q 028802 38 EELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC--SDRFVGL-----SPNSVDAL-LKLD---EDRVITGSE------ 100 (203)
Q Consensus 38 ~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~-----~~~~v~~~-~~~~---~~~l~~~~~------ 100 (203)
...+.|+|.|+|+++++-...+.|++++... +.. +..+... ....+..+ ++|+ +..|+++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~-g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPES-GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCC-CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4567999999999777765445788886532 221 1111110 12345567 8885 555554432
Q ss_pred -------CCcEEEEEccCC-------ceee-eeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 101 -------NGLISLVGILPN-------RIIQ-PIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 101 -------dg~v~v~d~~~~-------~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
...|..+++..+ +.+. .+..........|+|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 134555655322 1121 12211111468899999998766654
No 342
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.30 E-value=2.3 Score=33.25 Aligned_cols=144 Identities=10% Similarity=0.115 Sum_probs=89.3
Q ss_pred ccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCC
Q 028802 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPN 82 (203)
Q Consensus 3 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 82 (203)
.+|..+.||.=. ..++.|+|+.+...+....-.+ .|..=.|-.+.. |+..+ +..|+-|++.....+.+.|.. |..
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~-l~lVT-~taVyHWsi~~~s~P~kvFdR-~~~ 147 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDR-HSS 147 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTE-EEEEC-SSEEEEEESSSSCCCEEEEEC-CGG
T ss_pred eCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCe-EEEEc-CCeeEEecccCCCCchhheec-chh
Confidence 467777776654 5899999999988877776543 465556765543 33332 467999999654456666654 432
Q ss_pred ----ceeEE-EeeCCCEEEEEcC-------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCC-----eEEEEeC--
Q 028802 83 ----SVDAL-LKLDEDRVITGSE-------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-----FLGSISH-- 143 (203)
Q Consensus 83 ----~v~~~-~~~~~~~l~~~~~-------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~l~~~~~-- 143 (203)
.|..- .+++.++++..+- .|.+.+|..+. +..+.+.+|.. .-..+-.+|+ .++.+..
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa---~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA---SFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEE---EEEEEECTTCSSEEEEEEEEECST
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeee---eeEEEecCCCCCCceEEEEEEecC
Confidence 22222 4788888775442 46788998764 45567788732 2233433332 2333332
Q ss_pred -CCcEEEEeCCCc
Q 028802 144 -DSMLKLWDLDDI 155 (203)
Q Consensus 144 -d~~i~iwd~~~~ 155 (203)
.+.++|-++...
T Consensus 224 ~g~kLhi~Ei~~~ 236 (494)
T 1bpo_A 224 AGGKLHIIEVGTP 236 (494)
T ss_dssp TCCEEEEEECSCC
T ss_pred CCcEEEEEEcCCC
Confidence 378999998554
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.88 E-value=0.28 Score=36.79 Aligned_cols=107 Identities=7% Similarity=-0.020 Sum_probs=61.0
Q ss_pred CEEEEecCCCeEEEEEcCCccccceeeecCC-CCceeEEE---eeCCCEEEEE--cCCCcEEEEEccCCceeeeeccCC-
Q 028802 50 RKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS-PNSVDALL---KLDEDRVITG--SENGLISLVGILPNRIIQPIAEHS- 122 (203)
Q Consensus 50 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~~~v~~~~---~~~~~~l~~~--~~dg~v~v~d~~~~~~~~~~~~~~- 122 (203)
..+++++.||.|+-+|..+ ++..-.+.. . ..++...- .+.+..++.+ ..+|.|+.++..+|.....+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~t-G~~~W~~~~-~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRN-GHIIWSIEP-ENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTT-TEEEEEECG-GGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCC-CcEEEEecC-CccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 3677888899999988865 444444443 2 11221111 1112234433 589999999988875554433211
Q ss_pred --CcceEE---EEE-e----CCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 123 --EYPIES---LAL-S----HDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 123 --~~~i~~---~~~-~----~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
..++.. ... . ..+..+++++.++.+...|+++++..
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 012221 000 0 14457788999999999999988754
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.82 E-value=2.7 Score=37.91 Aligned_cols=146 Identities=10% Similarity=0.125 Sum_probs=84.4
Q ss_pred ccccCCEEEEEcCCCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCC-
Q 028802 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP- 81 (203)
Q Consensus 3 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~- 81 (203)
.+|..+.||.=. ..++.|+|+.+...+....-. .+|..=.|-.....-+++ +..|+.|++.....+.+.|.. |.
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lVT--~~aVyHW~~~~~s~P~k~fdR-~~~ 147 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT--DNAVYHWSMEGESQPVKMFDR-HSS 147 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEEc--CCeEEEeccCCCCccHHHHhc-chh
Confidence 467777666654 588999999887666655543 346555665444333332 457999999644455555554 42
Q ss_pred ---CceeEE-EeeCCCEEEEEc-------CCCcEEEEEccCCceeeeeccCCCcceEEEEEe--CCCC-eEEEEe---CC
Q 028802 82 ---NSVDAL-LKLDEDRVITGS-------ENGLISLVGILPNRIIQPIAEHSEYPIESLALS--HDRK-FLGSIS---HD 144 (203)
Q Consensus 82 ---~~v~~~-~~~~~~~l~~~~-------~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~--~~~~-~l~~~~---~d 144 (203)
..|..- .+++.++++..+ ..|.+.+|..+. +..+.+.+|.. ....+... +... .++.+. ..
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~-~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA-SFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHh-hhheeccCCCCCCceEEEEEEecCCC
Confidence 233333 478888877544 247899998764 34455666643 22222221 1112 222222 23
Q ss_pred CcEEEEeCCCc
Q 028802 145 SMLKLWDLDDI 155 (203)
Q Consensus 145 ~~i~iwd~~~~ 155 (203)
+.++|-++...
T Consensus 226 ~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 226 GKLHIIEVGTP 236 (1630)
T ss_pred ceEEEEecCCC
Confidence 68999988654
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.24 E-value=2.3 Score=34.40 Aligned_cols=70 Identities=10% Similarity=0.124 Sum_probs=49.3
Q ss_pred eeEE-EeeCCCEEEEEcC-CCcEEEEEccC------Cce-------eeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEE
Q 028802 84 VDAL-LKLDEDRVITGSE-NGLISLVGILP------NRI-------IQPIAEHSEYPIESLALSHDRKFLGSISHDSMLK 148 (203)
Q Consensus 84 v~~~-~~~~~~~l~~~~~-dg~v~v~d~~~------~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 148 (203)
...+ .+|+|++++.++. +.++.|++++. ++. ....... -.....+|.++|.-..+.-.|..|.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G--lGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG--LGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC--SCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC--CcccEEEECCCCceEeeeeecceEE
Confidence 3445 7999999988764 77899999873 111 2223322 2467789999995455566899999
Q ss_pred EEeCCCc
Q 028802 149 LWDLDDI 155 (203)
Q Consensus 149 iwd~~~~ 155 (203)
.|++...
T Consensus 403 kWni~~a 409 (638)
T 3sbq_A 403 KWNMEEA 409 (638)
T ss_dssp EEEHHHH
T ss_pred EEeccHH
Confidence 9998764
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.93 E-value=3.9 Score=30.59 Aligned_cols=57 Identities=9% Similarity=0.102 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCCcEEEEEccCCceeee--eccCCCcceEEEEEeCCCCeEEEEe-CCCcE
Q 028802 91 DEDRVITGSENGLISLVGILPNRIIQP--IAEHSEYPIESLALSHDRKFLGSIS-HDSML 147 (203)
Q Consensus 91 ~~~~l~~~~~dg~v~v~d~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i 147 (203)
++.++++....+.|...++..++.... +.......+..+++.|||..+++.. .++.|
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 466776666778888888876543322 2111122689999999998665433 34433
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.10 E-value=4.7 Score=31.59 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=30.8
Q ss_pred CcccccCC-EEEEEcCCCeEEEEEcCCC---eEEEeec---------CCcccEEEEEEeeC
Q 028802 1 MTFAADAM-KLLGTSGDGTLSVCNLRKN---TVQTRSE---------FSEEELTSVVLMKN 48 (203)
Q Consensus 1 l~~sp~~~-~l~~~~~d~~i~v~d~~~~---~~~~~~~---------~~~~~i~~l~~~~~ 48 (203)
|+|.|+|. .|+++.+.|.|++++.... ..+..+. .....+..|+|+|+
T Consensus 19 ~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 19 ALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred EEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 57899996 5556667899999975422 1112221 11456889999986
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=88.19 E-value=2.3 Score=34.50 Aligned_cols=57 Identities=14% Similarity=0.056 Sum_probs=41.7
Q ss_pred eEE-EeeCCCEEEEEcCC------------CcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEE
Q 028802 85 DAL-LKLDEDRVITGSEN------------GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI 141 (203)
Q Consensus 85 ~~~-~~~~~~~l~~~~~d------------g~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 141 (203)
-.| |+|.|.++++-..+ ..+.+++..+++...-+.++.+..++.++|+||++.|++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 445 78999877664332 2466677777877766777766789999999999887665
No 349
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.89 E-value=2.9 Score=33.94 Aligned_cols=55 Identities=13% Similarity=0.183 Sum_probs=38.0
Q ss_pred CcccccCCEEEEEcCC------------CeEEEEEcCCCeEEEeecCC-cccEEEEEEeeCCCEEEEe
Q 028802 1 MTFAADAMKLLGTSGD------------GTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCG 55 (203)
Q Consensus 1 l~~sp~~~~l~~~~~d------------~~i~v~d~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~ 55 (203)
|+|+|.|++++.-..+ +.+.+.+..++++...+..+ ...++.++|+||++.|++.
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 5788999866664322 34566666677766555543 4679999999999887765
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.67 E-value=7.6 Score=33.49 Aligned_cols=35 Identities=9% Similarity=0.139 Sum_probs=28.7
Q ss_pred eeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeee
Q 028802 84 VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI 118 (203)
Q Consensus 84 v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~ 118 (203)
+.++ ..++..++++.+.|+++++|++.+++++.+.
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4444 5667889999999999999999999887664
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=84.04 E-value=7.1 Score=31.59 Aligned_cols=59 Identities=15% Similarity=0.043 Sum_probs=39.5
Q ss_pred eeEE-EeeCCCEEEEEcC------------CCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEe
Q 028802 84 VDAL-LKLDEDRVITGSE------------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (203)
Q Consensus 84 v~~~-~~~~~~~l~~~~~------------dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 142 (203)
...| |.++|.+.+.-.. ...|..++..+++....+.......++.++|+||++.|++.-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3455 7888887773321 125677777777766555544334689999999999887664
No 352
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=83.51 E-value=10 Score=27.30 Aligned_cols=118 Identities=16% Similarity=0.228 Sum_probs=71.8
Q ss_pred cccEEEEEEee--CCCEEEEecCCCeEEEEEcCCcc-----ccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEE
Q 028802 37 EEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK-----DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVG 108 (203)
Q Consensus 37 ~~~i~~l~~~~--~~~~l~~~~~d~~i~v~d~~~~~-----~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d 108 (203)
...|..+.. + +..+++..+..|.++...+.... .....+.. ...+..+ .......++..+..|.+..+.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke--gD~l~~~~~~~~~~~ill~T~~G~~~r~~ 143 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE--GDEVVSIASSVDETHILLFTKKGRVARFS 143 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT--TCCEEEEEECCSSCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC--CCEEEEEEEeCCCCEEEEEECCCEEEEEE
Confidence 455666644 4 46789999999999998875321 11111222 2334334 344556788888999988777
Q ss_pred ccC----C---ceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 109 ILP----N---RIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 109 ~~~----~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
... + +-...+....+..|.++...+++.+++..+..|.++...+.....
T Consensus 144 ~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~ 199 (276)
T 3no0_A 144 VREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPK 199 (276)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCC
T ss_pred hhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHccc
Confidence 532 1 111112222222576666666677888999999999888765543
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.14 E-value=3.9 Score=33.05 Aligned_cols=57 Identities=12% Similarity=0.168 Sum_probs=38.3
Q ss_pred CcccccCCEEEEEcC------------CCeEEEEEcCCCeEEEeecCC-cccEEEEEEeeCCCEEEEecC
Q 028802 1 MTFAADAMKLLGTSG------------DGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQ 57 (203)
Q Consensus 1 l~~sp~~~~l~~~~~------------d~~i~v~d~~~~~~~~~~~~~-~~~i~~l~~~~~~~~l~~~~~ 57 (203)
|+|+++|.+.+.... ...|..++..++++...+... ...++.++|+||++.|+++-+
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 467888877663321 125666776677766555443 357899999999998877643
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.86 E-value=15 Score=28.71 Aligned_cols=30 Identities=10% Similarity=0.133 Sum_probs=22.4
Q ss_pred ccEEEEEEeeCCC-EEEEecCCCeEEEEEcC
Q 028802 38 EELTSVVLMKNGR-KVVCGSQSGTVLLYSWG 67 (203)
Q Consensus 38 ~~i~~l~~~~~~~-~l~~~~~d~~i~v~d~~ 67 (203)
...+.|+|.|++. .|+++...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3467899999986 45555678999999753
No 355
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.39 E-value=12 Score=27.04 Aligned_cols=127 Identities=11% Similarity=0.101 Sum_probs=59.8
Q ss_pred CCeEEEEEcCC-CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCceeEEEeeCCCE
Q 028802 16 DGTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDR 94 (203)
Q Consensus 16 d~~i~v~d~~~-~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 94 (203)
+|.|+.|-... +++- .-......|..++... ...+.-. +|.++.|-....++.- .... ....+..+..-....
T Consensus 119 ~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~~gqlg-~p~~-~~~~v~~i~~G~~hs 192 (282)
T 3qhy_B 119 DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNYFGQTT-VPAE-AQSGVDDVAGGIFHS 192 (282)
T ss_dssp TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCTTSTTS-CCGG-GGSSEEEEEECSSEE
T ss_pred CCeEEEecCCCCCcCC-CCccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCCCCCCC-Ccee-cCCCeEEEEecCCEE
Confidence 77777776543 2211 1111123455554332 2222223 6888888765333221 1111 123455553333334
Q ss_pred EEEEcCCCcEEEEEccCCceee-eeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 95 VITGSENGLISLVGILPNRIIQ-PIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 95 l~~~~~dg~v~v~d~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
++. .+|.|+.|-......+. ..... . .|..|+.-.. +.+... |+.|+.|=....
T Consensus 193 ~al--~~G~v~~wG~n~~gqlg~p~~~~-~-~v~~i~~G~~--h~~al~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 193 LAL--KDGKVIAWGDNRYKQTTVPTEAL-S-GVSAIASGEW--YSLALK-NGKVIAWGSSRT 247 (282)
T ss_dssp EEE--ETTEEEEEECCTTSTTCCCGGGG-S-SCCEEEECSS--CEEEEE-TTEEEEESTTCC
T ss_pred EEE--ECCeEEEEECCCCCCCCCCcccC-C-CceEEEcCCC--EEEEEE-CCEEEEecCCCC
Confidence 444 58999999754322221 11111 1 4666654333 333333 899999965443
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.50 E-value=2.5 Score=36.38 Aligned_cols=34 Identities=26% Similarity=0.151 Sum_probs=29.3
Q ss_pred ceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcccC
Q 028802 125 PIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (203)
Q Consensus 125 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (203)
.+.+++..++..++++.+.|+++++|++.++..-
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeE
Confidence 4677788888899999999999999999988643
No 357
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.50 E-value=23 Score=29.29 Aligned_cols=137 Identities=20% Similarity=0.139 Sum_probs=73.3
Q ss_pred EEEEcCCCeEEEEEcCCCeEEEee----cCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeec-----CC
Q 028802 10 LLGTSGDGTLSVCNLRKNTVQTRS----EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-----LS 80 (203)
Q Consensus 10 l~~~~~d~~i~v~d~~~~~~~~~~----~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~ 80 (203)
|..++.+ -|..++..++...... ......|.++....++.+.+ ++.. -+..|+.... ....+.. ..
T Consensus 115 lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~--~~~~~~~~~~~~~~ 189 (758)
T 3ott_A 115 LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNG--KFEGIPLPVHSSQS 189 (758)
T ss_dssp EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTT--EEEEECCCCCTTCS
T ss_pred EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCC--ceEEecCCCccccc
Confidence 4444443 5777777665443210 01234577777766776555 4444 4777876432 1222211 01
Q ss_pred CCceeEE-EeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
...|.++ ..+++..|..|+. +-|..++..+++........ ...|.++....+|...+ |+. +-|.+++..+.
T Consensus 190 ~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~ 261 (758)
T 3ott_A 190 NLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFH-NNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTT 261 (758)
T ss_dssp SCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEE-EEEEEEEEECTTCCEEE-EET-TEEEEECCTTS
T ss_pred cceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCC-CCeEEEEEEcCCCCEEE-EeC-CceeEEecCCC
Confidence 1236777 4566666666664 35778887765432211111 22588888777776554 343 45778877653
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.10 E-value=7.6 Score=34.18 Aligned_cols=31 Identities=10% Similarity=0.123 Sum_probs=26.3
Q ss_pred EeeCCCEEEEEcCCCcEEEEEccCCceeeee
Q 028802 88 LKLDEDRVITGSENGLISLVGILPNRIIQPI 118 (203)
Q Consensus 88 ~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~ 118 (203)
..++..++++-+.|+++++|++.+++++.+.
T Consensus 245 ~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 245 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp EETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4567789999999999999999998877663
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.10 E-value=3.4 Score=36.34 Aligned_cols=32 Identities=28% Similarity=0.172 Sum_probs=26.8
Q ss_pred ccccCCEEEEEcCCCeEEEEEcCCCeEEEeec
Q 028802 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE 34 (203)
Q Consensus 3 ~sp~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 34 (203)
..++..++++-+.|+++|||++.+++++.+..
T Consensus 245 ~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 245 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp EETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34567899999999999999999998877653
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=74.85 E-value=23 Score=26.24 Aligned_cols=149 Identities=15% Similarity=0.146 Sum_probs=88.4
Q ss_pred cCCEEEEEcCCCeEEEEEcCC-------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcC--Cccc-----
Q 028802 6 DAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG--YFKD----- 71 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~--~~~~----- 71 (203)
+..+++..+..|.++...+.. +.....+.. ...+..+........|+..+..|.+..+... .-..
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 466888888999999887653 222223333 3456666555566778888889998888775 2111
Q ss_pred ---cceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC-------ceeeeeccCC-CcceEEEEEeCCCCeEE
Q 028802 72 ---CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN-------RIIQPIAEHS-EYPIESLALSHDRKFLG 139 (203)
Q Consensus 72 ---~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~-------~~~~~~~~~~-~~~i~~~~~~~~~~~l~ 139 (203)
..-.+. ....+..+ ..+.+..++..+..|.++...+... +-+..+.... ...+..+....+...++
T Consensus 187 ~Gv~~i~L~--~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~ 264 (327)
T 3uc1_A 187 SGVQGMRFN--IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELY 264 (327)
T ss_dssp BCEESSCCC--TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEE
T ss_pred CCeeeecCC--CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEE
Confidence 111122 23345555 3445668899999999988776432 2222232211 12455554444556777
Q ss_pred EEeCCCcEEEEeCCCccc
Q 028802 140 SISHDSMLKLWDLDDILK 157 (203)
Q Consensus 140 ~~~~d~~i~iwd~~~~~~ 157 (203)
..+.+|.+.-+.+..-..
T Consensus 265 l~T~~G~~ir~~~~~i~~ 282 (327)
T 3uc1_A 265 AVTSGGGVIRTAARQVRK 282 (327)
T ss_dssp EEEGGGCEEEEEGGGSCB
T ss_pred EEcCCCeEEEEehhhccc
Confidence 777788888887655433
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=73.74 E-value=24 Score=25.89 Aligned_cols=147 Identities=9% Similarity=0.052 Sum_probs=88.3
Q ss_pred cccCCEEEEEcCCCeEEEEEcCCCe---------EEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc-----
Q 028802 4 AADAMKLLGTSGDGTLSVCNLRKNT---------VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF----- 69 (203)
Q Consensus 4 sp~~~~l~~~~~d~~i~v~d~~~~~---------~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~----- 69 (203)
-|+..++++.+.+|.|+-..+..-. ....+.. ...+..+........++..+..|.++-+....-
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 3566788899999999988764321 1112222 345556666666677888888998887776421
Q ss_pred ---cccc---eeeecCCCCceeEEE-ee---CCCEEEEEcCCCcEEEEEccC-------CceeeeeccCCCcceEEEEEe
Q 028802 70 ---KDCS---DRFVGLSPNSVDALL-KL---DEDRVITGSENGLISLVGILP-------NRIIQPIAEHSEYPIESLALS 132 (203)
Q Consensus 70 ---~~~~---~~~~~~~~~~v~~~~-~~---~~~~l~~~~~dg~v~v~d~~~-------~~~~~~~~~~~~~~i~~~~~~ 132 (203)
+..+ -.+. ....+..++ -+ +..+++..+..|.++...+.. |.....+.. +..+..+...
T Consensus 84 ~~~G~~i~~~l~l~--~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~--~d~lv~~~~~ 159 (312)
T 1suu_A 84 ASKGQNISELINLG--DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND--KDFVTSAEIV 159 (312)
T ss_dssp ----CBGGGTSCCC--TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT--TCCEEEEEEE
T ss_pred cCCCcChhhccCCC--CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC--CCEEEEEEEe
Confidence 1111 1122 123444442 22 467888999999999887643 222222332 2256666655
Q ss_pred CCCCeEEEEeCCCcEEEEeCCCc
Q 028802 133 HDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 133 ~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
.....++..+..|.+..+.+..-
T Consensus 160 ~~~~~i~l~T~~G~~~r~~~~ev 182 (312)
T 1suu_A 160 FKDEKVICLSKKGSAFIFNSRDV 182 (312)
T ss_dssp CTTCEEEEEETTSEEEEEEGGGS
T ss_pred CCCCEEEEEeCCCcEEEEEHHHc
Confidence 55667888889999999987653
No 362
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=72.56 E-value=24 Score=25.37 Aligned_cols=88 Identities=11% Similarity=0.022 Sum_probs=40.0
Q ss_pred CCeEEEEEcCCCeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceeeecCCCCceeEEEeeCCCEE
Q 028802 16 DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRV 95 (203)
Q Consensus 16 d~~i~v~d~~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 95 (203)
||.|+.|-......+..-......|..++.... ..++. . +|.|+.|-....++.- .... -...+..+..-....
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg-~P~~-~~~~v~~ia~G~~hs- 114 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTT-VPAE-ARSGVDAIAAGAWAS- 114 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTC-CCGG-GSSSEEEEEEETTEE-
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCC-CCcc-cCCCeEEEECcCCEE-
Confidence 788888875532111100111234555554322 22333 4 7888888765332221 1111 122344442222222
Q ss_pred EEEcCCCcEEEEEcc
Q 028802 96 ITGSENGLISLVGIL 110 (203)
Q Consensus 96 ~~~~~dg~v~v~d~~ 110 (203)
+.-. +|.|+.|-..
T Consensus 115 ~al~-~G~v~~wG~n 128 (282)
T 3qhy_B 115 YALK-DGKVIAWGDD 128 (282)
T ss_dssp EEEE-TTEEEEEECC
T ss_pred EEEe-CCeEEEecCC
Confidence 3333 7778777654
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.28 E-value=7.1 Score=32.48 Aligned_cols=30 Identities=13% Similarity=0.102 Sum_probs=25.3
Q ss_pred ccCCEEEEEcCCCeEEEEEcCCCeEEEeec
Q 028802 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSE 34 (203)
Q Consensus 5 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 34 (203)
.+..++++-+.|.++|+|++.+++++....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 356788999999999999999998776554
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.36 E-value=11 Score=31.31 Aligned_cols=32 Identities=16% Similarity=0.147 Sum_probs=26.9
Q ss_pred eeCCCEEEEEcCCCcEEEEEccCCceeeeecc
Q 028802 89 KLDEDRVITGSENGLISLVGILPNRIIQPIAE 120 (203)
Q Consensus 89 ~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~ 120 (203)
..+..++++-+.|+.+++|++.+++++.+...
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45678999999999999999999987766543
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=66.72 E-value=33 Score=24.66 Aligned_cols=147 Identities=11% Similarity=0.042 Sum_probs=88.2
Q ss_pred cCCEEEEEcCCCeEEEEEcCC------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc--------
Q 028802 6 DAMKLLGTSGDGTLSVCNLRK------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-------- 71 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~-------- 71 (203)
+..+++..+..|.++...+.. +.....+.. ...+..+........++..+..|.++.+....-..
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 356788889999999888653 222223332 34566665555666788888899998887642111
Q ss_pred cceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccC-------CceeeeeccCCCcceEEEEEeCCCCeEEEEeC
Q 028802 72 CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP-------NRIIQPIAEHSEYPIESLALSHDRKFLGSISH 143 (203)
Q Consensus 72 ~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 143 (203)
..-.+.. ...+..+ ..+++..++..+..|.++...+.. ++-+..+ ...+ .+..+....+...++..+.
T Consensus 158 ~~i~L~~--~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~-~lv~~~~~~~~~~i~~~t~ 233 (276)
T 3no0_A 158 QGIKLEK--NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKD-TLVDLIPIKEEVELLITTK 233 (276)
T ss_dssp ECCCCCT--TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSS-CEEEEEEESSEEEEEEEET
T ss_pred EEEccCC--CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCC-cEEEEEEeCCCCEEEEEcC
Confidence 1111222 3445555 345567888999999998887643 2223333 2222 4555444344456777778
Q ss_pred CCcEEE--EeCCCccc
Q 028802 144 DSMLKL--WDLDDILK 157 (203)
Q Consensus 144 d~~i~i--wd~~~~~~ 157 (203)
+|.+.. +++.....
T Consensus 234 ~G~~ir~~~~~~~i~~ 249 (276)
T 3no0_A 234 NGKAFYDKINQKDIPL 249 (276)
T ss_dssp TSCEEEEEEEGGGSCB
T ss_pred CCeEEEeeeCHHHCCC
Confidence 888887 87655443
No 366
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=60.08 E-value=73 Score=26.35 Aligned_cols=142 Identities=11% Similarity=0.013 Sum_probs=70.2
Q ss_pred ccCCEEEEEcCCCeEEEEEcCCCeEEEeecC---CcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccceee--ecC
Q 028802 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF---SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF--VGL 79 (203)
Q Consensus 5 p~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~ 79 (203)
++|++.+.++..+-|..++..+++....... ....+.++....+|.+.+. +..| +..|+.... ....+ .+.
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~--~~~~~~~~gl 556 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDE--SQQSISFGSF 556 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--C--CCCBCCCCC-
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCC--ceEEecccCC
Confidence 3455444333334577788877655432211 1245777777777766554 4444 778876432 12222 121
Q ss_pred CCCceeEEEeeCCCEEEEEcCCCcEEEEEccCCceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 80 SPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 80 ~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
....+.++...+| .|..++..| |..++..+.+.. .+... ...+....+......|+.|+.+| +..++....
T Consensus 557 ~~~~i~~i~~~~g-~lWi~t~~G-l~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~G~l~fG~~~G-l~~f~p~~~ 627 (758)
T 3ott_A 557 SNNEILSMTCVKN-SIWVSTTNG-LWIIDRKTMDAR-QQNMT-NKRFTSLLFDPKEDCVYLGGADG-FGISHSNLE 627 (758)
T ss_dssp --CCEEEEEEETT-EEEEEESSC-EEEEETTTCCEE-EC--C-CCCCSEEEEETTTTEEEEECBSE-EEEEEC---
T ss_pred CccceEEEEECCC-CEEEECCCC-eEEEcCCCceeE-EecCC-CCceeeeEEECCCCcEEEecCCc-eEEEChhhc
Confidence 2344666643455 455566666 677888765543 22111 11333444443334566677676 455565543
No 367
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=56.16 E-value=53 Score=25.99 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=35.0
Q ss_pred CEEEEEcCCCcEEEEEc-cCC-------ceeeeeccC-CCcceEEEEEeCCCCeEEEEeCCCcEEE
Q 028802 93 DRVITGSENGLISLVGI-LPN-------RIIQPIAEH-SEYPIESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 93 ~~l~~~~~dg~v~v~d~-~~~-------~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
..+..|+.+|.|.-.-+ ..+ ..+..+... ...+|..|.++++..+|++++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 34667788887653322 221 122233321 1238999999999999999988776654
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=51.15 E-value=74 Score=23.74 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=25.7
Q ss_pred CEEEEEcCCCeEEEEEcCC-C---eEEEeecCCcccEEEEEEee--CCCEEEEecCCC
Q 028802 8 MKLLGTSGDGTLSVCNLRK-N---TVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSG 59 (203)
Q Consensus 8 ~~l~~~~~d~~i~v~d~~~-~---~~~~~~~~~~~~i~~l~~~~--~~~~l~~~~~d~ 59 (203)
..|.+|+..| +.+++... + ...... .....|.+|++.| .+..+ +++..+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~-~g~~~g 77 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERML-MAARTG 77 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEE-EEEEC-
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEE-EEecCC
Confidence 3577777766 55555432 2 222111 2245699999998 44444 444444
No 369
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=50.51 E-value=64 Score=22.85 Aligned_cols=146 Identities=12% Similarity=0.106 Sum_probs=81.7
Q ss_pred CEEEEEcCCCeEEEEEcCCCeE-EEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc------ccccee-eecC
Q 028802 8 MKLLGTSGDGTLSVCNLRKNTV-QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF------KDCSDR-FVGL 79 (203)
Q Consensus 8 ~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~------~~~~~~-~~~~ 79 (203)
..+++.+.+|.|+--....-.. ...+.. ...+..+........|+..+..|.++-+..... +..+.. +.-.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 3456677888888666543111 112222 344555554455556666677888777655321 111111 1110
Q ss_pred CCCceeEEE-eeCCCEEEEEcCCCcEEEEEccC-------CceeeeeccCCCcceEEEEEe-CCCCeEEEEeCCCcEEEE
Q 028802 80 SPNSVDALL-KLDEDRVITGSENGLISLVGILP-------NRIIQPIAEHSEYPIESLALS-HDRKFLGSISHDSMLKLW 150 (203)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~dg~v~v~d~~~-------~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~iw 150 (203)
....|..++ ..+..+++.++..|.++...+.. +.....+... + .+..+... .++..|+..+.+|.+..|
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d-~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-A-HVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-C-CBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-C-EEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 233455553 24567788999999999888743 2233333322 2 45444454 345678888889999889
Q ss_pred eCCCcc
Q 028802 151 DLDDIL 156 (203)
Q Consensus 151 d~~~~~ 156 (203)
.+..-.
T Consensus 160 ~~~ei~ 165 (256)
T 1zvt_A 160 PVSDLP 165 (256)
T ss_dssp EGGGSC
T ss_pred EHHHCC
Confidence 876543
No 370
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=50.37 E-value=34 Score=27.41 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=35.7
Q ss_pred CEEEEEcCCCcEEEEEccCC----ceeeeeccCC-CcceE-EEEEeCCCCeEEEEeCCCcEEE
Q 028802 93 DRVITGSENGLISLVGILPN----RIIQPIAEHS-EYPIE-SLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 93 ~~l~~~~~dg~v~v~d~~~~----~~~~~~~~~~-~~~i~-~~~~~~~~~~l~~~~~d~~i~i 149 (203)
..+..|+.+|.|.-.-+... ..+..+.... +.+|. .|.+++++.+|++++..+.++|
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45667888888765544422 1233333222 23775 8999999999999887655544
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=49.35 E-value=77 Score=23.42 Aligned_cols=119 Identities=15% Similarity=0.149 Sum_probs=71.6
Q ss_pred cccEEEEEEee---CCCEEEEecCCCeEEEEEcCCcccc------ceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEE
Q 028802 37 EEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDC------SDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISL 106 (203)
Q Consensus 37 ~~~i~~l~~~~---~~~~l~~~~~d~~i~v~d~~~~~~~------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v 106 (203)
...|..+...+ +..+++..+..|.++...+...... ...+.. ...+..+ .......|+..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke--~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD--NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT--TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC--CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 34565554443 4678999999999999887532111 112222 2333334 3445567888888898877
Q ss_pred EEcc--C----Cc---eeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCccc
Q 028802 107 VGIL--P----NR---IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (203)
Q Consensus 107 ~d~~--~----~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (203)
+... . ++ -...+....+..|.++...+++.+|+..+..|.++.-.+.....
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPV 231 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred EECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccc
Confidence 7655 2 11 11112222223577776666677899999999998887765543
No 372
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=48.71 E-value=68 Score=25.40 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=35.7
Q ss_pred EEEEEcCCCeEEEEEcC-CCe-------EEEeec--CCcccEEEEEEeeCCCEEEEecCCCeEEE
Q 028802 9 KLLGTSGDGTLSVCNLR-KNT-------VQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (203)
Q Consensus 9 ~l~~~~~d~~i~v~d~~-~~~-------~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~v 63 (203)
.++.|+.+|.|.-.-+. .+. .+..+. ....+|..|.++++..+|++++..+.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 45677888877544432 211 122232 23578899999999999999998876655
No 373
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=42.47 E-value=1.1e+02 Score=23.14 Aligned_cols=153 Identities=12% Similarity=0.066 Sum_probs=90.8
Q ss_pred cccccCCEEEEEcCCCeEEEEEcCC---------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc---
Q 028802 2 TFAADAMKLLGTSGDGTLSVCNLRK---------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF--- 69 (203)
Q Consensus 2 ~~sp~~~~l~~~~~d~~i~v~d~~~---------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~--- 69 (203)
.+-|+..++++.+.+|.|+--.+.. +.....++. ...+..+........|+..+..|.++.+....-
T Consensus 2 dlI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 2 DLIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred CcccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCC
Confidence 4557888999999999999876531 222233433 455666666666677777778888777665311
Q ss_pred -----cccceee-ecCCCCceeEEE--e--eCCCEEEEEcCCCcEEEEEccCCc-----eeeeeccCCCcceEEEEEeCC
Q 028802 70 -----KDCSDRF-VGLSPNSVDALL--K--LDEDRVITGSENGLISLVGILPNR-----IIQPIAEHSEYPIESLALSHD 134 (203)
Q Consensus 70 -----~~~~~~~-~~~~~~~v~~~~--~--~~~~~l~~~~~dg~v~v~d~~~~~-----~~~~~~~~~~~~i~~~~~~~~ 134 (203)
+..+..+ .-.....|..++ . ....+++.++..|.++...+.... -+..+....+..+..+.....
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~ 160 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDG 160 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECS
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCC
Confidence 1111111 110234455552 2 245689999999999988764321 122222221224555555555
Q ss_pred CCeEEEEeCCCcEEEEeCCCc
Q 028802 135 RKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 135 ~~~l~~~~~d~~i~iwd~~~~ 155 (203)
...|+..+..|.+..|....-
T Consensus 161 ~~~i~l~T~~G~~irf~~~~v 181 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGESTV 181 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGGS
T ss_pred CceEEEEeCCCeEEEEEcccc
Confidence 567888888898888876544
No 374
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=40.98 E-value=1.2e+02 Score=24.61 Aligned_cols=56 Identities=16% Similarity=0.042 Sum_probs=36.0
Q ss_pred EEEEEcCCCeEEEEEcCC-C-----eEEEeec--CCcccEEEEEEeeCCCEEEEecCCCeEEEE
Q 028802 9 KLLGTSGDGTLSVCNLRK-N-----TVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLY 64 (203)
Q Consensus 9 ~l~~~~~d~~i~v~d~~~-~-----~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~ 64 (203)
.++.|+.+|.|.-.-+.. + -.+..+. ....+|..|.++++...|++++..+.++|-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 456677788876443322 2 1122232 245678899999999999998887766653
No 375
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=39.61 E-value=76 Score=25.40 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=34.7
Q ss_pred EEEEEcCCCcEEEEEcc-CC--ceeeeeccCCCcce-EEEEEeCCCCeEEEEeCCCcEEE
Q 028802 94 RVITGSENGLISLVGIL-PN--RIIQPIAEHSEYPI-ESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 94 ~l~~~~~dg~v~v~d~~-~~--~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
.+..|+.+|.|.-.-+. .+ ..+..+......+| ..+.++++..+|++++..+.++|
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45567788887644332 21 12233332223367 48999999999999887776665
No 376
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=38.82 E-value=1.5e+02 Score=24.08 Aligned_cols=57 Identities=18% Similarity=0.135 Sum_probs=34.1
Q ss_pred CEEEEEcCCCcEEEEEc-cCC----c-eeeeecc-CCCcceEEEEEeCCCCeEEEEeCCCcEEE
Q 028802 93 DRVITGSENGLISLVGI-LPN----R-IIQPIAE-HSEYPIESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 93 ~~l~~~~~dg~v~v~d~-~~~----~-~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
..+..|+.+|.|.-.-+ ..+ . .+..+.. ....+|..+.++++..+|++++.++.++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 35667778887653322 222 1 1222321 11237899999999999988877665554
No 377
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=38.37 E-value=1.6e+02 Score=24.43 Aligned_cols=57 Identities=18% Similarity=0.289 Sum_probs=33.8
Q ss_pred CEEEEEcCCCcEE-EEEccCCc-------eeeeecc-CCCcceEEEEEeCCCCeEEEEeCCCcEEE
Q 028802 93 DRVITGSENGLIS-LVGILPNR-------IIQPIAE-HSEYPIESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 93 ~~l~~~~~dg~v~-v~d~~~~~-------~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
..+..|+.+|.|. +.-...+. .+..+.. ....+|..|.+++++.+|++++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 3566778888765 33222111 1222211 11237899999999999999987766554
No 378
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=36.94 E-value=1.8e+02 Score=24.17 Aligned_cols=148 Identities=13% Similarity=0.077 Sum_probs=75.7
Q ss_pred ccccCCEEEEE-c----CCCeEEEEEcCCCeEEE-eecCCcc--------cEEEEEEeeCCCEEEEec----------CC
Q 028802 3 FAADAMKLLGT-S----GDGTLSVCNLRKNTVQT-RSEFSEE--------ELTSVVLMKNGRKVVCGS----------QS 58 (203)
Q Consensus 3 ~sp~~~~l~~~-~----~d~~i~v~d~~~~~~~~-~~~~~~~--------~i~~l~~~~~~~~l~~~~----------~d 58 (203)
++|++++++.+ + .-..++++|+.+++.+. .+. ... ....++|..+...+++.. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 78999987664 2 23479999999987753 222 111 123458874444444321 12
Q ss_pred CeEEEEEcCCccccc-eeeecCCCCcee-EE-EeeCCCE-----EEEEcC---CCcEEEEEccC--CceeeeeccCCCcc
Q 028802 59 GTVLLYSWGYFKDCS-DRFVGLSPNSVD-AL-LKLDEDR-----VITGSE---NGLISLVGILP--NRIIQPIAEHSEYP 125 (203)
Q Consensus 59 ~~i~v~d~~~~~~~~-~~~~~~~~~~v~-~~-~~~~~~~-----l~~~~~---dg~v~v~d~~~--~~~~~~~~~~~~~~ 125 (203)
..++.|.+.+....- ..+.. ....+. .. .++++.+ +++.+. ...+++.+... ++ +..+.....
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-- 291 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEV-PKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSD-- 291 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEEC-CTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTT--
T ss_pred CEEEEEECCCChHHCeEEecc-CCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCc--
Confidence 468888876532222 23333 333332 12 4556552 443332 23466666542 33 233433322
Q ss_pred eEEEEEeCCCCeEEEE----------eCCCcEEEEeCCCcc
Q 028802 126 IESLALSHDRKFLGSI----------SHDSMLKLWDLDDIL 156 (203)
Q Consensus 126 i~~~~~~~~~~~l~~~----------~~d~~i~iwd~~~~~ 156 (203)
..+..+.++.+++.. ...+.|.+.++.++.
T Consensus 292 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 331 (711)
T 4hvt_A 292 -ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLL 331 (711)
T ss_dssp -CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGG
T ss_pred -ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCccc
Confidence 123344566555522 246678899987754
No 379
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=36.43 E-value=1.2e+02 Score=22.06 Aligned_cols=117 Identities=14% Similarity=0.137 Sum_probs=69.8
Q ss_pred ccEEEEEEee---CCCEEEEecCCCeEEEEEcCCc------cccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEE
Q 028802 38 EELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYF------KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLV 107 (203)
Q Consensus 38 ~~i~~l~~~~---~~~~l~~~~~d~~i~v~d~~~~------~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~ 107 (203)
..|..+...+ +..+|+..+..|.++...+... +.....+.. ...+-.+ .......++..+..|.+..+
T Consensus 100 e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~--~d~lv~~~~~~~~~~i~l~T~~G~~~r~ 177 (312)
T 1suu_A 100 EEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND--KDFVTSAEIVFKDEKVICLSKKGSAFIF 177 (312)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT--TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC--CCEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 3455554333 4677888899999998877421 111112222 2334444 33445678888999998888
Q ss_pred EccC----C---ceeeeeccCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 108 GILP----N---RIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 108 d~~~----~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
.... + +-...+....+..|.++....++..|++.+..|.++...+....
T Consensus 178 ~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~ 233 (312)
T 1suu_A 178 NSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKIS 233 (312)
T ss_dssp EGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSC
T ss_pred EHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhc
Confidence 7643 1 11222222222256666655566778888899999999886653
No 380
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=35.94 E-value=1.2e+02 Score=25.04 Aligned_cols=55 Identities=18% Similarity=0.229 Sum_probs=35.2
Q ss_pred EEEEEcCCCeEE-EEEcCCCe-------EEEee--cCCcccEEEEEEeeCCCEEEEecCCCeEEE
Q 028802 9 KLLGTSGDGTLS-VCNLRKNT-------VQTRS--EFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (203)
Q Consensus 9 ~l~~~~~d~~i~-v~d~~~~~-------~~~~~--~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v 63 (203)
.++.|+.+|.|. +.....+. .+..+ .....+|..|.++++..+|++++..+.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 456677888775 33222111 12222 234568899999999999999998876665
No 381
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=31.95 E-value=78 Score=25.35 Aligned_cols=55 Identities=7% Similarity=-0.034 Sum_probs=34.2
Q ss_pred EEEEEcCCCeEEEEEcCCC----eEEEeec--CCcccEE-EEEEeeCCCEEEEecCCCeEEE
Q 028802 9 KLLGTSGDGTLSVCNLRKN----TVQTRSE--FSEEELT-SVVLMKNGRKVVCGSQSGTVLL 63 (203)
Q Consensus 9 ~l~~~~~d~~i~v~d~~~~----~~~~~~~--~~~~~i~-~l~~~~~~~~l~~~~~d~~i~v 63 (203)
.++.|+.+|.|.-..+..+ ..+..+. ....+|. .|.++++..+|++++..+.++|
T Consensus 415 V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 415 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4567778888765554322 1223222 2245675 8889998889988887665544
No 382
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=31.24 E-value=1.6e+02 Score=21.95 Aligned_cols=144 Identities=14% Similarity=0.104 Sum_probs=73.0
Q ss_pred EEEEcCCCeEEEEEcCCC-----------eEEEeecC-CcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccccc----
Q 028802 10 LLGTSGDGTLSVCNLRKN-----------TVQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS---- 73 (203)
Q Consensus 10 l~~~~~d~~i~v~d~~~~-----------~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~---- 73 (203)
.+.-..+|.|+.|-.... .....+.. ....+..++++....+.+....+|.|+.|-....+++-
T Consensus 65 ~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~ 144 (389)
T 3kci_A 65 LFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR 144 (389)
T ss_dssp EEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSC
T ss_pred EEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCC
Confidence 344456889999965321 01111211 12334445666666666667789999999654322110
Q ss_pred ------eeeecCCCCceeEEEeeCCCEEEEEcCCCcEEEEEccC-Cc---------ee-eeeccCCCcceEEEEEeCCCC
Q 028802 74 ------DRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILP-NR---------II-QPIAEHSEYPIESLALSHDRK 136 (203)
Q Consensus 74 ------~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~v~d~~~-~~---------~~-~~~~~~~~~~i~~~~~~~~~~ 136 (203)
..+.......+..+ ..-....++...+|.|+.|-... ++ .. ..+.......|..++......
T Consensus 145 ~~~~~p~~v~~l~~~~i~~v-a~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~ 223 (389)
T 3kci_A 145 SPCDRPRVIESLRGIEVVDV-AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA 223 (389)
T ss_dssp CCEEEEEECGGGTTSCEEEE-EECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSC
T ss_pred ccCcCCeEecccCCCeEEEE-EeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCc
Confidence 00111011123333 23334455566788899886432 10 00 111111122566666544335
Q ss_pred eEEEEeCCCcEEEEeCCC
Q 028802 137 FLGSISHDSMLKLWDLDD 154 (203)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~ 154 (203)
+.+....++.|+.|-...
T Consensus 224 ~t~~l~~~G~v~~wG~n~ 241 (389)
T 3kci_A 224 QTLCLTDDDTVWSWGDGD 241 (389)
T ss_dssp EEEEEETTTEEEEEECCG
T ss_pred EEEEEccCCEEEEEeCCC
Confidence 666677899999996543
No 383
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=31.16 E-value=1.6e+02 Score=21.84 Aligned_cols=108 Identities=6% Similarity=-0.002 Sum_probs=52.1
Q ss_pred cEEEEEEeeC--CCEEEEecCCCeEEEEEcCCccccceeeec------------------CCCCceeEE-EeeC-CCEEE
Q 028802 39 ELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFKDCSDRFVG------------------LSPNSVDAL-LKLD-EDRVI 96 (203)
Q Consensus 39 ~i~~l~~~~~--~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~------------------~~~~~v~~~-~~~~-~~~l~ 96 (203)
.|.++++.|. ...|+.+...+.|...+ ..+.....+.. .....+.++ ++|. ...++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~--DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST--DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES--STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc--CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 5778888872 45566555555555442 22333333211 012245677 6763 44555
Q ss_pred EEcCCCcEEEEEccCCceeeeeccC-C-----------CcceEEEEEeCC-CCeEEEEeCCCcEEEE
Q 028802 97 TGSENGLISLVGILPNRIIQPIAEH-S-----------EYPIESLALSHD-RKFLGSISHDSMLKLW 150 (203)
Q Consensus 97 ~~~~dg~v~v~d~~~~~~~~~~~~~-~-----------~~~i~~~~~~~~-~~~l~~~~~d~~i~iw 150 (203)
.+...+.|...+ ..++....+... . ...+.++.++|. ...|+.+...+ |...
T Consensus 194 vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 194 IGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp EEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred EEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 555444444332 223222222110 0 114888999986 35666665443 4433
No 384
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.02 E-value=89 Score=18.77 Aligned_cols=9 Identities=11% Similarity=0.420 Sum_probs=3.8
Q ss_pred CCCcEEEEE
Q 028802 100 ENGLISLVG 108 (203)
Q Consensus 100 ~dg~v~v~d 108 (203)
.+|.+.+++
T Consensus 65 ~dGNLVl~d 73 (113)
T 3mez_B 65 HSGELDITD 73 (113)
T ss_dssp TTSCEEEEC
T ss_pred CCCcEEEEC
Confidence 344444443
No 385
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=30.74 E-value=1.5e+02 Score=21.47 Aligned_cols=148 Identities=11% Similarity=0.116 Sum_probs=84.2
Q ss_pred ccCCEEEEEcCCCeEEEEEcCCCeE---------EEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCc------
Q 028802 5 ADAMKLLGTSGDGTLSVCNLRKNTV---------QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF------ 69 (203)
Q Consensus 5 p~~~~l~~~~~d~~i~v~d~~~~~~---------~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~------ 69 (203)
|+...+++.+.+|.|+--.+..-+. ...+.. ...+..+........|+..+..|.++-+....-
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 4566788899999998777653211 111222 344555555556677777788888777665321
Q ss_pred --cccce-eeecCCCCceeEEEe----eCCCEEEEEcCCCcEEEEEccCC-------ceeeeeccCCCcceEEEEEeCCC
Q 028802 70 --KDCSD-RFVGLSPNSVDALLK----LDEDRVITGSENGLISLVGILPN-------RIIQPIAEHSEYPIESLALSHDR 135 (203)
Q Consensus 70 --~~~~~-~~~~~~~~~v~~~~~----~~~~~l~~~~~dg~v~v~d~~~~-------~~~~~~~~~~~~~i~~~~~~~~~ 135 (203)
+.++. .+.-.....|..++. .+..+++..+..|.++...+... .....+..+ + .+..+......
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d-~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-D-ELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-C-CEEEEEEECTT
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-C-EEEEEEEeCCC
Confidence 11111 111102334555521 35678999999999998876421 111223333 3 56555555555
Q ss_pred CeEEEEeCCCcEEEEeCCCc
Q 028802 136 KFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 136 ~~l~~~~~d~~i~iwd~~~~ 155 (203)
..|+..+..|.+..+....-
T Consensus 158 ~~i~l~T~~G~~irf~~~~v 177 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSV 177 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGS
T ss_pred CEEEEECCCCcEEEEEHHHc
Confidence 67888888899888876544
No 386
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=28.84 E-value=1.7e+02 Score=21.28 Aligned_cols=147 Identities=16% Similarity=0.185 Sum_probs=83.6
Q ss_pred cCCEEEEEcCCCeEEEEEcCC-------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc-------
Q 028802 6 DAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD------- 71 (203)
Q Consensus 6 ~~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~------- 71 (203)
+..+++..+..|.++...+.. +.....+... ..+..+........++..+..|.+..+....-..
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~G 186 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG 186 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCC
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCC
Confidence 345677888889998887642 2222233333 5566665555566777888889988887742111
Q ss_pred -cceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEccCC-------ceeee--eccCCCcceEEEEEeCCCCeEEE
Q 028802 72 -CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN-------RIIQP--IAEHSEYPIESLALSHDRKFLGS 140 (203)
Q Consensus 72 -~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~~~-------~~~~~--~~~~~~~~i~~~~~~~~~~~l~~ 140 (203)
..-.+.. ...+..+ .-.++..+++.+..|.++..++... +-+.. +....+ .+-.+....+...|+.
T Consensus 187 v~~i~L~~--~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~-~lv~~~~v~~~~~l~~ 263 (307)
T 1zi0_A 187 VRGIRLGE--GDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNG-LVVGAVQVDDCDQIMM 263 (307)
T ss_dssp EECCCCCT--TCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTC-SEEEEEEECTTCEEEE
T ss_pred eEeEEeCC--CCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCC-eEEEEEEeCCCceEEE
Confidence 0111221 2344445 3344567888889999888876421 11112 222212 4555444344456667
Q ss_pred EeCCCcEEEEeCCCcc
Q 028802 141 ISHDSMLKLWDLDDIL 156 (203)
Q Consensus 141 ~~~d~~i~iwd~~~~~ 156 (203)
.+.+|.+.-+.+..-.
T Consensus 264 ~t~~g~~ir~~~~~i~ 279 (307)
T 1zi0_A 264 ITDAGTLVRTRVSEIS 279 (307)
T ss_dssp EESSCCEEEEEGGGSC
T ss_pred EcCCCcEEEEeccccc
Confidence 7778887777765543
No 387
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=26.70 E-value=1.6e+02 Score=24.41 Aligned_cols=57 Identities=16% Similarity=0.254 Sum_probs=34.8
Q ss_pred CEEEEEcCCCcEEEEEccC-C---ceeeeeccC-CCcce-EEEEEeCCCCeEEEEeCCCcEEE
Q 028802 93 DRVITGSENGLISLVGILP-N---RIIQPIAEH-SEYPI-ESLALSHDRKFLGSISHDSMLKL 149 (203)
Q Consensus 93 ~~l~~~~~dg~v~v~d~~~-~---~~~~~~~~~-~~~~i-~~~~~~~~~~~l~~~~~d~~i~i 149 (203)
..+..|+.+|.|.-.-+.. . ..+..+... ...+| ..+.++++..+|+.++..+.++|
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 3566788889876544332 1 123333221 12366 68999999889988877666555
No 388
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=25.40 E-value=1.8e+02 Score=20.50 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=55.8
Q ss_pred EEEEecCCCeEEEEEcCCccccceeeecCCCCceeEE-EeeCCCEEEEEcCCCcEEEEEcc---C----Ccee-eeeccC
Q 028802 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGIL---P----NRII-QPIAEH 121 (203)
Q Consensus 51 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~v~d~~---~----~~~~-~~~~~~ 121 (203)
.+++.+.+|.|+--...........+.. ...+..+ .......++..+..|.++-+... . |.++ ..+...
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke--~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKA--GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCT--TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCC--CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 3456677787776654321111112332 2333334 33444566677777876655432 1 2222 112222
Q ss_pred CCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCcc
Q 028802 122 SEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (203)
Q Consensus 122 ~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (203)
.+..|.++....++.+|+.++..|.++...+....
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~ 116 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLV 116 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGC
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhc
Confidence 22357766443456778889999999999876543
No 389
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=25.16 E-value=2.7e+02 Score=22.51 Aligned_cols=26 Identities=15% Similarity=0.060 Sum_probs=21.5
Q ss_pred ceEEEEEeCCCCeEEEEeCCCcEEEE
Q 028802 125 PIESLALSHDRKFLGSISHDSMLKLW 150 (203)
Q Consensus 125 ~i~~~~~~~~~~~l~~~~~d~~i~iw 150 (203)
+|..|.++++...|++++..+.++|-
T Consensus 471 pI~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 471 RIMGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp CCCEEEEEGGGTEEEEECSSCEEEEE
T ss_pred ceEEEEEcCCCCEEEEEecCeEEEee
Confidence 78899999999999998877766653
No 390
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=21.74 E-value=2.6e+02 Score=21.04 Aligned_cols=145 Identities=17% Similarity=0.155 Sum_probs=80.2
Q ss_pred CCEEEEEcCCCeEEEEEcCC-------CeEEEeecCCcccEEEEEEeeCCCEEEEecCCCeEEEEEcCCccc--------
Q 028802 7 AMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-------- 71 (203)
Q Consensus 7 ~~~l~~~~~d~~i~v~d~~~-------~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~v~d~~~~~~-------- 71 (203)
..+|+.++..|.++...+.. |.....+.. ...+..+........|+..+..|.+..|....-..
T Consensus 113 ~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV 191 (370)
T 3l6v_A 113 NRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGV 191 (370)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCe
Confidence 45788888899999887642 222223333 34565565555566788888889988887642110
Q ss_pred cceeeecCCCCceeEE-Eee-----------------------------------CCCEEEEEcCCCcEEEEEccCC---
Q 028802 72 CSDRFVGLSPNSVDAL-LKL-----------------------------------DEDRVITGSENGLISLVGILPN--- 112 (203)
Q Consensus 72 ~~~~~~~~~~~~v~~~-~~~-----------------------------------~~~~l~~~~~dg~v~v~d~~~~--- 112 (203)
..-.+. ....+..+ .-+ .+..+++.+..|..+...+...
T Consensus 192 ~~i~L~--~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~ 269 (370)
T 3l6v_A 192 RGIRLA--KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRK 269 (370)
T ss_dssp ECCCCC--TTCCEEEEEEECCC-----------------------------------CEEEEEETTSEEEEEEGGGSCCB
T ss_pred eeEEeC--CCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhccc
Confidence 011111 12333333 222 3467889999999888876532
Q ss_pred ----ceeeeec--cCCCcceEEEEEeCCCCeEEEEeCCCcEEEEeCCCc
Q 028802 113 ----RIIQPIA--EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (203)
Q Consensus 113 ----~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (203)
+-+..+. ...+ .+..+.+..+...++..+..|.+.-..+...
T Consensus 270 ~Rg~kGv~~~k~~~~~g-~lv~~~~v~~~d~i~liT~~G~~iR~~v~~i 317 (370)
T 3l6v_A 270 GRGTQGVIGIQTTERNG-KLVRAVLLGSTDEVMLISDGGTLVRTRGSEI 317 (370)
T ss_dssp CTTSCCEESSCCCTTTC-SEEEEEEECTTCEEEEEETTCCEEEEEGGGS
T ss_pred ccCCcceEEEEecCCCC-cEEEEEEeCCCceEEEEcCCCeEEEeeHhhC
Confidence 1122222 2222 4555444444456666666777666655443
No 391
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.80 E-value=3.6e+02 Score=22.28 Aligned_cols=56 Identities=14% Similarity=0.201 Sum_probs=0.0
Q ss_pred EEEEEcCCCcEEEEEccCCceeeeeccCC---CcceEEEEEeCCC--CeEEEEeCCCcEEE
Q 028802 94 RVITGSENGLISLVGILPNRIIQPIAEHS---EYPIESLALSHDR--KFLGSISHDSMLKL 149 (203)
Q Consensus 94 ~l~~~~~dg~v~v~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~--~~l~~~~~d~~i~i 149 (203)
.++.|+.+|.|.-.-.............. ..+|..|.++++. .+|++++..+.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
No 392
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=20.36 E-value=1.5e+02 Score=17.89 Aligned_cols=9 Identities=22% Similarity=0.320 Sum_probs=3.7
Q ss_pred CCCeEEEEE
Q 028802 15 GDGTLSVCN 23 (203)
Q Consensus 15 ~d~~i~v~d 23 (203)
.||.+.+++
T Consensus 38 ~dgnlvly~ 46 (119)
T 1b2p_A 38 TDCNLVLYD 46 (119)
T ss_dssp TTSCEEEEE
T ss_pred cCCCEEEEE
Confidence 344444433
No 393
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=20.28 E-value=3.5e+02 Score=21.92 Aligned_cols=28 Identities=4% Similarity=0.094 Sum_probs=23.0
Q ss_pred cccEEEEEEeeCCCEEEEecCCCeEEEE
Q 028802 37 EEELTSVVLMKNGRKVVCGSQSGTVLLY 64 (203)
Q Consensus 37 ~~~i~~l~~~~~~~~l~~~~~d~~i~v~ 64 (203)
..+|..|.++++...|++++..+.++|-
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEee
Confidence 4578899999999999999888877664
Done!