Your job contains 1 sequence.
>028804
MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR
SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR
GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTVCPSSSLIV
VYLGGHGWCYKSLIFTCVAPWGG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028804
(203 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175733 - symbol:SGR4 "SHOOT GRAVITROPSIM 4" s... 649 1.2e-63 1
TAIR|locus:2200595 - symbol:VTI1B species:3702 "Arabidops... 610 1.7e-59 1
TAIR|locus:2094662 - symbol:VTI13 "vesicle transport V-sn... 454 5.7e-43 1
TAIR|locus:2164830 - symbol:AT5G39630 species:3702 "Arabi... 390 3.5e-36 1
MGI|MGI:1855699 - symbol:Vti1a "vesicle transport through... 241 2.1e-20 1
ASPGD|ASPL0000044157 - symbol:AN1973 species:162425 "Emer... 236 7.2e-20 1
UNIPROTKB|Q96AJ9 - symbol:VTI1A "Vesicle transport throug... 235 9.2e-20 1
UNIPROTKB|J9NRK3 - symbol:VTI1A "Uncharacterized protein"... 233 1.5e-19 1
RGD|621490 - symbol:Vti1a "vesicle transport through inte... 232 1.9e-19 1
UNIPROTKB|E1BYU6 - symbol:VTI1A "Uncharacterized protein"... 226 8.3e-19 1
UNIPROTKB|G4NC77 - symbol:MGG_01124 "Vesicle transport V-... 224 1.4e-18 1
FB|FBgn0260862 - symbol:Vti1 species:7227 "Drosophila mel... 220 3.6e-18 1
ZFIN|ZDB-GENE-050809-135 - symbol:vti1a "vesicle transpor... 211 3.2e-17 1
UNIPROTKB|F1S5L0 - symbol:VTI1A "Uncharacterized protein"... 201 3.7e-16 1
POMBASE|SPBC3B9.10 - symbol:vti1 "SNARE Vti1 (predicted)"... 190 5.4e-15 1
WB|WBGene00013302 - symbol:vti-1 species:6239 "Caenorhabd... 186 1.4e-14 1
SGD|S000004810 - symbol:VTI1 "Protein involved in cis-Gol... 164 3.1e-12 1
UNIPROTKB|A0JNE7 - symbol:VTI1A "Uncharacterized protein"... 162 5.0e-12 1
ZFIN|ZDB-GENE-040426-1148 - symbol:vti1b "vesicle transpo... 153 4.5e-11 1
UNIPROTKB|F1S5K8 - symbol:F1S5K8 "Uncharacterized protein... 151 7.4e-11 1
DICTYBASE|DDB_G0292974 - symbol:vti1A "v-SNARE family pro... 150 9.4e-11 1
UNIPROTKB|F1N1Z0 - symbol:VTI1B "Vesicle transport throug... 150 9.4e-11 1
UNIPROTKB|Q2KIU0 - symbol:VTI1B "Vesicle transport throug... 150 9.4e-11 1
UNIPROTKB|Q9UEU0 - symbol:VTI1B "Vesicle transport throug... 149 1.2e-10 1
UNIPROTKB|E2R276 - symbol:VTI1A "Uncharacterized protein"... 146 2.5e-10 1
MGI|MGI:1855688 - symbol:Vti1b "vesicle transport through... 146 1.3e-09 1
UNIPROTKB|E1BYU9 - symbol:VTI1A "Uncharacterized protein"... 139 1.4e-09 1
RGD|1560475 - symbol:RGD1560475 "similar to vesicle trans... 145 2.0e-09 1
UNIPROTKB|P58200 - symbol:Vti1b "Vesicle transport throug... 145 2.0e-09 1
UNIPROTKB|E1BUX5 - symbol:VTI1B "Uncharacterized protein"... 142 7.7e-09 1
UNIPROTKB|F1SA25 - symbol:VTI1B "Uncharacterized protein"... 141 1.1e-08 1
RGD|2323682 - symbol:LOC100359512 "vesicle transport thro... 137 5.1e-08 1
UNIPROTKB|J9NYA0 - symbol:VTI1B "Uncharacterized protein"... 137 5.3e-08 1
>TAIR|locus:2175733 [details] [associations]
symbol:SGR4 "SHOOT GRAVITROPSIM 4" species:3702
"Arabidopsis thaliana" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005770 "late endosome" evidence=IDA;TAS]
[GO:0005802 "trans-Golgi network" evidence=IDA;TAS] [GO:0006896
"Golgi to vacuole transport" evidence=IGI] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0009630 "gravitropism" evidence=IMP]
[GO:0030140 "trans-Golgi network transport vesicle" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0000325 "plant-type
vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA;IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0000902
"cell morphogenesis" evidence=RCA] [GO:0006605 "protein targeting"
evidence=RCA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0007033 "vacuole
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0016049 "cell growth" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0016197 "endosomal
transport" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008
GO:GO:0016021 GO:GO:0005794 GO:GO:0005774 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016192 GO:GO:0031902 GO:GO:0000325
GO:GO:0009630 GO:GO:0005770 GO:GO:0005802 EMBL:AB009054
GO:GO:0006623 SUPFAM:SSF47661 EMBL:AF114750 EMBL:AY070486
EMBL:AY091707 IPI:IPI00519170 RefSeq:NP_198767.1 UniGene:At.30339
UniGene:At.71131 ProteinModelPortal:Q9SEL6 SMR:Q9SEL6 IntAct:Q9SEL6
STRING:Q9SEL6 PaxDb:Q9SEL6 PRIDE:Q9SEL6 EnsemblPlants:AT5G39510.1
GeneID:833947 KEGG:ath:AT5G39510 GeneFarm:4299 TAIR:At5g39510
eggNOG:NOG239679 HOGENOM:HOG000116573 InParanoid:Q9SEL6 KO:K08493
OMA:LIMSTER PhylomeDB:Q9SEL6 ProtClustDB:CLSN2687331
Genevestigator:Q9SEL6 GermOnline:AT5G39510 Uniprot:Q9SEL6
Length = 221
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 126/172 (73%), Positives = 150/172 (87%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS VF+GYERQYCELSA LS+KC++A +LDGE KKQKLSEIK+GL++A+ LIRKMDLEAR
Sbjct: 1 MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+L PN+K+ LL KLRE+K+DLNN K EVKR+TSG +N AARDELLE+GMAD SADQR
Sbjct: 61 TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTV 172
RL+MSTERL +TDR+K+SRRTM+ETEE+GVSILQDLH QRQSLL AH T+
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETL 172
>TAIR|locus:2200595 [details] [associations]
symbol:VTI1B species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA;IPI] [GO:0000149 "SNARE binding" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0005770 "late
endosome" evidence=TAS] [GO:0005802 "trans-Golgi network"
evidence=IDA;TAS] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=RCA;TAS] [GO:0005483 "soluble NSF attachment
protein activity" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046907 "intracellular transport" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006623 "protein
targeting to vacuole" evidence=RCA;IMP] [GO:0000902 "cell
morphogenesis" evidence=RCA] [GO:0006869 "lipid transport"
evidence=RCA] [GO:0010351 "lithium ion transport" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0016197 "endosomal
transport" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005794 GO:GO:0016192
GO:GO:0031902 GO:GO:0005770 GO:GO:0005802 GO:GO:0006623
EMBL:AC006535 SUPFAM:SSF47661 GO:GO:0005483 eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 ProtClustDB:CLSN2687331
EMBL:AF114751 IPI:IPI00532963 RefSeq:NP_564255.1 UniGene:At.24378
ProteinModelPortal:Q9SEL5 SMR:Q9SEL5 STRING:Q9SEL5 PaxDb:Q9SEL5
PRIDE:Q9SEL5 EnsemblPlants:AT1G26670.1 GeneID:839208
KEGG:ath:AT1G26670 GeneFarm:4300 TAIR:At1g26670 InParanoid:Q9SEL5
OMA:QYCELST PhylomeDB:Q9SEL5 Genevestigator:Q9SEL5
GermOnline:AT1G26670 Uniprot:Q9SEL5
Length = 222
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 122/171 (71%), Positives = 145/171 (84%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASAL-DGELKKQKLSEIKTGLDDADALIRKMDLEA 59
MS VFEGYERQYCELS LSRKC +AS L +GE KK K++EIK+G+D+AD LIRKMDLEA
Sbjct: 1 MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60
Query: 60 RSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQ 119
RSLQP+ KA+ LSKLREYK+DLN LK E KRV+S + ++R+EL+ESGMAD VSADQ
Sbjct: 61 RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120
Query: 120 RGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHN 170
RGRL MS ERL+ S+DRI+ESRR MLETEE+G+SI+QDL QQRQ+LLHAHN
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHN 171
>TAIR|locus:2094662 [details] [associations]
symbol:VTI13 "vesicle transport V-snare 13" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=IPI] [GO:0000149 "SNARE binding" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS]
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 EMBL:CP002686
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493
ProtClustDB:CLSN2687331 EMBL:BT029498 IPI:IPI00570404
RefSeq:NP_189554.2 UniGene:At.36973 ProteinModelPortal:A1A6H8
SMR:A1A6H8 STRING:A1A6H8 EnsemblPlants:AT3G29100.1 GeneID:822557
KEGG:ath:AT3G29100 OMA:MTRRMNR Genevestigator:A1A6H8 Uniprot:A1A6H8
Length = 195
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 89/121 (73%), Positives = 104/121 (85%)
Query: 52 IRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMAD 111
++KMDLEAR+L PNVK+ LL KLREYK+DLNN K EVKR+TSGN+N ARDELLE+GMAD
Sbjct: 26 VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85
Query: 112 AMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNT 171
+ SADQR RL+MST+ L +TDRIK+SRRT+LETEELGVSILQDLH QRQSLL AH T
Sbjct: 86 TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145
Query: 172 V 172
+
Sbjct: 146 L 146
>TAIR|locus:2164830 [details] [associations]
symbol:AT5G39630 species:3702 "Arabidopsis thaliana"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA;IPI] [GO:0000149 "SNARE binding" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 EMBL:CP002688 GO:GO:0006886
GO:GO:0016020 GO:GO:0016192 GO:GO:0005622 SUPFAM:SSF47661 KO:K08493
ProtClustDB:CLSN2687331 EMBL:DQ447016 IPI:IPI00537827
RefSeq:NP_198779.1 UniGene:At.55257 ProteinModelPortal:Q1PDQ2
SMR:Q1PDQ2 STRING:Q1PDQ2 EnsemblPlants:AT5G39630.1 GeneID:833959
KEGG:ath:AT5G39630 TAIR:At5g39630 InParanoid:Q1PDQ2 OMA:RLMKSTE
PhylomeDB:Q1PDQ2 ArrayExpress:Q1PDQ2 Genevestigator:Q1PDQ2
Uniprot:Q1PDQ2
Length = 207
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 83/165 (50%), Positives = 117/165 (70%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS VF Y++QY ELS LS+KC+ A +L G KK+KLSEI L++A+ LI KMD A
Sbjct: 1 MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAAS 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+L PN+K++LL KL+E K+ L L+NE+KR TS N+ R+E+LE+ AD ADQR
Sbjct: 61 NLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQR 116
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSL 165
RL+ STE L + + IK+S+R +LETE +G+SIL++L +Q++SL
Sbjct: 117 SRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESL 161
>MGI|MGI:1855699 [details] [associations]
symbol:Vti1a "vesicle transport through interaction with
t-SNAREs 1A" species:10090 "Mus musculus" [GO:0005484 "SNAP
receptor activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=ISO] [GO:0031201 "SNARE complex" evidence=ISO] [GO:0042147
"retrograde transport, endosome to Golgi" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0048280 "vesicle fusion with
Golgi apparatus" evidence=ISO] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
MGI:MGI:1855699 GO:GO:0016021 GO:GO:0006886 GO:GO:0000139
GO:GO:0043025 GO:GO:0008021 GO:GO:0006888 GO:GO:0031201
GO:GO:0042147 GO:GO:0048280 SUPFAM:SSF47661 eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 CTD:143187 HOVERGEN:HBG104027
OMA:YEQDFGT OrthoDB:EOG4V6ZHV EMBL:AF035823 EMBL:AF035209
EMBL:AK004751 EMBL:AK028646 EMBL:BC019386 IPI:IPI00131540
RefSeq:NP_058558.1 UniGene:Mm.258637 UniGene:Mm.451214 PDB:1VCS
PDBsum:1VCS ProteinModelPortal:O89116 SMR:O89116 IntAct:O89116
STRING:O89116 PhosphoSite:O89116 PaxDb:O89116 PRIDE:O89116
Ensembl:ENSMUST00000095950 GeneID:53611 KEGG:mmu:53611
UCSC:uc008hxx.1 GeneTree:ENSGT00530000063466
EvolutionaryTrace:O89116 NextBio:310323 Bgee:O89116
Genevestigator:O89116 GermOnline:ENSMUSG00000024983 Uniprot:O89116
Length = 217
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 55/170 (32%), Positives = 96/170 (56%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+ P + M +++R YK ++ L+ + KR ++ R+ELL DA S +QR
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEV-RNELL----GDAGNSSENQR 115
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHN 170
LL +TERL S+ R++ + +ETE++G +L++L R+ + A +
Sbjct: 116 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARD 165
>ASPGD|ASPL0000044157 [details] [associations]
symbol:AN1973 species:162425 "Emericella nidulans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0030173 "integral to
Golgi membrane" evidence=IEA] [GO:0000324 "fungal-type vacuole"
evidence=IEA] [GO:0031201 "SNARE complex" evidence=IEA] [GO:0030428
"cell septum" evidence=IEA] [GO:0005484 "SNAP receptor activity"
evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IEA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 GO:GO:0006886 GO:GO:0016192
EMBL:BN001307 GO:GO:0031201 GO:GO:0042144 SUPFAM:SSF47661
HOGENOM:HOG000116573 OMA:QYCELST EnsemblFungi:CADANIAT00008633
Uniprot:C8VL45
Length = 224
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 53/176 (30%), Positives = 98/176 (55%)
Query: 2 SQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARS 61
S++ YE + + A L++K + L GE + + + + L++A L+ +M LE ++
Sbjct: 11 SEMLSSYETELNLVQADLNQKLDQIAELSGEQRNSTIRQAERALEEATELLDQMRLEKQN 70
Query: 62 LQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRG 121
+ ++ + ++ R Y TD++ K ++K ++ +A + DA + +QR
Sbjct: 71 IPSAARSKVNTRFRNYATDIDEAKRKLKSLSDDR--KALFGDRYTDDPQDAHL---EQRQ 125
Query: 122 RLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTVCPSSS 177
+LL TERL S+ R++ES+R LETE +G ++L DLHQQR+++ H H + S S
Sbjct: 126 QLLSGTERLERSSARLRESQRIALETEGIGANVLADLHQQRETITHTHGMLGQSES 181
>UNIPROTKB|Q96AJ9 [details] [associations]
symbol:VTI1A "Vesicle transport through interaction with
t-SNAREs homolog 1A" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IMP;IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005484 "SNAP receptor activity" evidence=IDA] [GO:0031201
"SNARE complex" evidence=TAS] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0005794 GO:GO:0006886 GO:GO:0000139 GO:GO:0043025
EMBL:CH471066 GO:GO:0008021 GO:GO:0006888 GO:GO:0031201
GO:GO:0042147 GO:GO:0005484 GO:GO:0048280 SUPFAM:SSF47661
EMBL:AL158212 eggNOG:NOG239679 HOGENOM:HOG000116573 KO:K08493
EMBL:AK303646 EMBL:AL139120 EMBL:AC022018 EMBL:BC017052
IPI:IPI00059472 IPI:IPI00852968 RefSeq:NP_660207.2
UniGene:Hs.194554 ProteinModelPortal:Q96AJ9 SMR:Q96AJ9
IntAct:Q96AJ9 MINT:MINT-3050814 STRING:Q96AJ9 PhosphoSite:Q96AJ9
DMDM:29337113 PaxDb:Q96AJ9 PeptideAtlas:Q96AJ9 PRIDE:Q96AJ9
DNASU:143187 Ensembl:ENST00000393077 Ensembl:ENST00000432306
GeneID:143187 KEGG:hsa:143187 UCSC:uc001kzy.3 CTD:143187
GeneCards:GC10P114197 H-InvDB:HIX0023094 HGNC:HGNC:17792 MIM:614316
neXtProt:NX_Q96AJ9 PharmGKB:PA134928049 HOVERGEN:HBG104027
OMA:YEQDFGT OrthoDB:EOG4V6ZHV GenomeRNAi:143187 NextBio:84666
ArrayExpress:Q96AJ9 Bgee:Q96AJ9 CleanEx:HS_VTI1A
Genevestigator:Q96AJ9 GermOnline:ENSG00000151532 Uniprot:Q96AJ9
Length = 217
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 54/168 (32%), Positives = 94/168 (55%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+ P + M +++R YK ++ L+ + KR ++ R+ELL D S +QR
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEV-RNELL----GDDGNSSENQR 115
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHA 168
LL +TERL S+ R++ + +ETE++G +L++L R+ + A
Sbjct: 116 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRA 163
>UNIPROTKB|J9NRK3 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 KO:K08493 CTD:143187 OMA:YEQDFGT
GeneTree:ENSGT00530000063466 EMBL:AAEX03015533
RefSeq:XP_003433671.1 Ensembl:ENSCAFT00000050009 GeneID:100685447
KEGG:cfa:100685447 Uniprot:J9NRK3
Length = 217
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 54/168 (32%), Positives = 94/168 (55%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSSDFEGYEQDFAVLTAEITGKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+ P + M +++R YK ++ L+ + KR ++ R+ELL D S +QR
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEV-RNELL----GDDGNSSENQR 115
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHA 168
LL +TERL S+ R++ + +ETE++G +L++L R+ + A
Sbjct: 116 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRA 163
>RGD|621490 [details] [associations]
symbol:Vti1a "vesicle transport through interaction with t-SNAREs
1A" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IDA] [GO:0008021
"synaptic vesicle" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IDA] [GO:0030672 "synaptic
vesicle membrane" evidence=IEA] [GO:0031201 "SNARE complex"
evidence=IDA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO;ISS] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IDA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 RGD:621490 GO:GO:0016021 GO:GO:0006886
GO:GO:0000139 GO:GO:0030054 GO:GO:0043025 GO:GO:0008021
GO:GO:0030672 GO:GO:0006888 GO:GO:0031201 GO:GO:0042147
GO:GO:0048280 SUPFAM:SSF47661 PDB:2NPS PDBsum:2NPS eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 CTD:143187 HOVERGEN:HBG104027
EMBL:AF262222 EMBL:AF262221 IPI:IPI00199945 IPI:IPI00324090
RefSeq:NP_075589.1 UniGene:Rn.154408 ProteinModelPortal:Q9JI51
SMR:Q9JI51 MINT:MINT-5225883 STRING:Q9JI51 PRIDE:Q9JI51
GeneID:65277 KEGG:rno:65277 UCSC:RGD:621490
EvolutionaryTrace:Q9JI51 NextBio:614244 ArrayExpress:Q9JI51
Genevestigator:Q9JI51 Uniprot:Q9JI51
Length = 224
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 52/171 (30%), Positives = 100/171 (58%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K + L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSADFEGYEQDFAVLTAEITSKISRVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELL-ESGMA--DAMMVSA 117
+ P + M +++R YK ++ L+ + KR ++ R+ELL ++G + + ++
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEV-RNELLGDAGNSSENQLIKLR 119
Query: 118 DQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHA 168
++R LL +TERL S+ R++ + +ETE++G +L++L R+ + A
Sbjct: 120 EERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRA 170
>UNIPROTKB|E1BYU6 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005484 "SNAP receptor
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 GO:GO:0005794 GO:GO:0006886
GO:GO:0016020 GO:GO:0042147 SUPFAM:SSF47661 OMA:YEQDFGT
GeneTree:ENSGT00530000063466 EMBL:AADN02030905 IPI:IPI00597059
Ensembl:ENSGALT00000014431 Uniprot:E1BYU6
Length = 187
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 54/168 (32%), Positives = 94/168 (55%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FE YE+ + L+A ++ + L G+ KKQ ++ I+ L++A L+ +M+LE R
Sbjct: 1 MSSDFESYEQDFAVLTADITGRIGRVPKLLGDEKKQMVANIEKQLEEARELLEQMELEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+ P + M S++R YK ++ L+ + KR ++ R+ELL D S +QR
Sbjct: 61 EIPPQSRGMYSSRMRSYKQEMGKLEADFKRSRIAYSDEV-RNELL----GDDGNSSENQR 115
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHA 168
LL +TERL S+ R++ + +ETE++G +L++L R+ + A
Sbjct: 116 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRA 163
>UNIPROTKB|G4NC77 [details] [associations]
symbol:MGG_01124 "Vesicle transport V-SNARE protein vti1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 EMBL:CM001235 GO:GO:0005622 SUPFAM:SSF47661 KO:K08493
RefSeq:XP_003717810.1 ProteinModelPortal:G4NC77
EnsemblFungi:MGG_01124T0 GeneID:2674406 KEGG:mgr:MGG_01124
Uniprot:G4NC77
Length = 233
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 56/182 (30%), Positives = 96/182 (52%)
Query: 2 SQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEA-R 60
+++F YE + + A LS+K + L GE +K LS+ L++AD L+ +M LE +
Sbjct: 11 TELFASYEAELKLVQADLSQKLDSIPDLTGEPRKAALSQASRALEEADELLGQMRLEKQK 70
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGN---VNQAARDELLESGMADAMMVSA 117
++ + +A + + R Y+TD++ ++ + + S +D SG A A V
Sbjct: 71 NIPSSSRARVNQRFRNYETDVDAVRRRLDALASDRSALFGGRYQDNPSGSGGASASDVQL 130
Query: 118 DQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTVCPSSS 177
+QR +LL T+RL+ S+ R+K+S LETE +G S L+DL QR + H + S
Sbjct: 131 EQREQLLRGTDRLDRSSRRLKDSHALALETEAIGASTLRDLAHQRSQIQHTTEVLVQSEG 190
Query: 178 LI 179
+
Sbjct: 191 YV 192
>FB|FBgn0260862 [details] [associations]
symbol:Vti1 species:7227 "Drosophila melanogaster"
[GO:0005484 "SNAP receptor activity" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=IEA;ISS] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 GO:GO:0006886 EMBL:AE014296 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 GO:GO:0005484 SUPFAM:SSF47661
eggNOG:NOG239679 KO:K08493 OMA:QYCELST GeneTree:ENSGT00530000063466
EMBL:AY058584 RefSeq:NP_612053.1 UniGene:Dm.20008 SMR:Q9W0N6
IntAct:Q9W0N6 MINT:MINT-921667 STRING:Q9W0N6
EnsemblMetazoa:FBtr0072607 GeneID:38085 KEGG:dme:Dmel_CG3279
UCSC:CG3279-RA CTD:38085 FlyBase:FBgn0260862 InParanoid:Q9W0N6
OrthoDB:EOG43FFD3 GenomeRNAi:38085 NextBio:806919 Uniprot:Q9W0N6
Length = 230
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 53/164 (32%), Positives = 89/164 (54%)
Query: 4 VFEGYERQYCELSAGLSRKCTAASALDGELKKQKL-SEIKTGLDDADALIRKMDLEARSL 62
+ E YE+QY L A ++ + ++ L S+I + L +A L+ +M LE R L
Sbjct: 3 LLEQYEQQYATLIAEITAHIGRLQQQNNNSERHDLCSKIDSSLPEAQELLEQMGLEVREL 62
Query: 63 QPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMA-DAMMVSADQRG 121
P +++ KL+ + +L L+ E + +QA L+ G + + + +S DQR
Sbjct: 63 NPGLRSSFNGKLQVAQAELKRLQAEYRLTKDKQRSQANTFTTLDLGDSYEDVSISTDQRQ 122
Query: 122 RLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSL 165
RLL ++ER+ + +R+ E R LETE+LG +L DLH QR++L
Sbjct: 123 RLLDNSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETL 166
>ZFIN|ZDB-GENE-050809-135 [details] [associations]
symbol:vti1a "vesicle transport through interaction
with t-SNAREs homolog 1A (yeast)" species:7955 "Danio rerio"
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
ZFIN:ZDB-GENE-050809-135 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
GO:GO:0005622 SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573
KO:K08493 CTD:143187 HOVERGEN:HBG104027 OrthoDB:EOG4V6ZHV
EMBL:BC099994 IPI:IPI00510396 RefSeq:NP_001030152.1
UniGene:Dr.134790 ProteinModelPortal:Q499B4 SMR:Q499B4
STRING:Q499B4 GeneID:567385 KEGG:dre:567385 InParanoid:Q499B4
NextBio:20888649 Uniprot:Q499B4
Length = 191
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 54/165 (32%), Positives = 87/165 (52%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FE YE+ + L+A ++ K GE K Q + + L++ L+ +MDLE R
Sbjct: 1 MSSDFEAYEQDFGTLTAEITNKIGRIPKSAGEEKTQLVLNVDKQLEEVRELMEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+ +AM S+L+ YK ++ L+ + KR ++ R+ELL D S QR
Sbjct: 61 EIPIQSRAMYNSRLKSYKQEMEKLEKDFKRSRIAYSDEV-RNELL----GDDGSSSETQR 115
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSL 165
LL +TERL S+ R++ + +ETE++G IL +LH R+ +
Sbjct: 116 AHLLDNTERLERSSRRLEAGYQIAVETEQVGQEILANLHSDREKI 160
>UNIPROTKB|F1S5L0 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 GO:GO:0005794 GO:GO:0006886
GO:GO:0016020 GO:GO:0042147 SUPFAM:SSF47661 OMA:YEQDFGT
GeneTree:ENSGT00530000063466 EMBL:CU468870
Ensembl:ENSSSCT00000011630 Uniprot:F1S5L0
Length = 152
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 48/147 (32%), Positives = 81/147 (55%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQR 120
+ P + M +++R YK ++ L+ + KR ++ R+ELL D S +QR
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEV-RNELL----GDDGNSSENQR 115
Query: 121 GRLLMSTERLNHSTDRIKESRRTMLET 147
LL +TERL S+ R++ + +ET
Sbjct: 116 AHLLDNTERLERSSRRLEAGYQIAVET 142
>POMBASE|SPBC3B9.10 [details] [associations]
symbol:vti1 "SNARE Vti1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0005484 "SNAP receptor activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006896 "Golgi to vacuole transport"
evidence=ISO] [GO:0030173 "integral to Golgi membrane"
evidence=ISO] [GO:0045324 "late endosome to vacuole transport"
evidence=ISO] [GO:0048278 "vesicle docking" evidence=IC]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 PomBase:SPBC3B9.10 GO:GO:0006886
EMBL:CU329671 GO:GO:0030173 GenomeReviews:CU329671_GR GO:GO:0006891
GO:GO:0000324 GO:GO:0006896 GO:GO:0045324 GO:GO:0005484
GO:GO:0048278 SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573
KO:K08493 EMBL:D89116 PIR:T40349 PIR:T42225 RefSeq:NP_596668.1
ProteinModelPortal:P78768 STRING:P78768 EnsemblFungi:SPBC3B9.10.1
GeneID:2540970 KEGG:spo:SPBC3B9.10 OMA:RKILSSM OrthoDB:EOG44F9KK
NextBio:20802085 Uniprot:P78768
Length = 214
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 54/166 (32%), Positives = 84/166 (50%)
Query: 6 EGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPN 65
E YE++Y L A + K S GE + + L++ D +I +M++E + +
Sbjct: 2 ETYEQEYRLLRADIEEKLNDLSK-SGE--NSVIQSCQRLLNEIDEVIGQMEIEITGIPTS 58
Query: 66 VKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAA---RDELLESGMADAMMVSADQRGR 122
+ ++ ++R Y++ L + +K + +A RDE SG A DQR R
Sbjct: 59 ERGLVNGRIRSYRSTLEEWRRHLKEEIGKSDRKALFGNRDET--SGDYIASDQDYDQRTR 116
Query: 123 LLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHA 168
LL T RL S+ R+ ES+R ETE +G SIL+DLH QR L H+
Sbjct: 117 LLQGTNRLEQSSQRLLESQRIANETEGIGASILRDLHGQRNQLEHS 162
>WB|WBGene00013302 [details] [associations]
symbol:vti-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0006886
GO:GO:0016020 GO:GO:0016192 EMBL:Z99281 GO:GO:0005622
SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573 KO:K08493
GeneTree:ENSGT00530000063466 PIR:T27217 RefSeq:NP_502781.1
ProteinModelPortal:O18230 SMR:O18230 STRING:O18230 PaxDb:O18230
EnsemblMetazoa:Y57G11C.4 GeneID:178397 KEGG:cel:CELE_Y57G11C.4
UCSC:Y57G11C.4 CTD:178397 WormBase:Y57G11C.4 InParanoid:O18230
OMA:FMFLYIV NextBio:900962 Uniprot:O18230
Length = 224
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 44/161 (27%), Positives = 86/161 (53%)
Query: 7 GYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNV 66
G+E+QY +A ++ K L + + EI+ L++ + L+ +M+L R L+ N
Sbjct: 13 GFEKQYSLQTAEITSKIGRVHTLPSSDRAGAVQEIRKSLEEVNDLLDQMELVVRELESNT 72
Query: 67 --KAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLL 124
+ ++R Y++D L E+++ +A RDELL D + Q +L+
Sbjct: 73 TERTKYELRVRSYQSDKKQLDTELEKAIKRVREEADRDELLAF---DDQLDEHRQEDQLI 129
Query: 125 MSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSL 165
+T+RL ST +++++ R +ETE++G +L +L QR+++
Sbjct: 130 ANTQRLERSTRKVQDAHRIAVETEQIGAEMLSNLASQRETI 170
>SGD|S000004810 [details] [associations]
symbol:VTI1 "Protein involved in cis-Golgi membrane traffic"
species:4932 "Saccharomyces cerevisiae" [GO:0005484 "SNAP receptor
activity" evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=IMP] [GO:0006896 "Golgi to vacuole transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IMP] [GO:0031201 "SNARE
complex" evidence=IPI] [GO:0030173 "integral to Golgi membrane"
evidence=IDA] [GO:0006906 "vesicle fusion" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
SMART:SM00397 SGD:S000004810 GO:GO:0006886 GO:GO:0031902
GO:GO:0030173 EMBL:BK006946 GO:GO:0006891 GO:GO:0006896
GO:GO:0031201 GO:GO:0005484 GO:GO:0006906 GO:GO:0042144 EMBL:Z47815
PDB:3ONL PDBsum:3ONL SUPFAM:SSF47661 eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 GeneTree:ENSGT00530000063466
OrthoDB:EOG44F9KK EMBL:AF006074 PIR:S50926 RefSeq:NP_013924.1
PDB:3ONJ PDBsum:3ONJ ProteinModelPortal:Q04338 SMR:Q04338
DIP:DIP-2145N IntAct:Q04338 MINT:MINT-545063 STRING:Q04338
PaxDb:Q04338 PeptideAtlas:Q04338 EnsemblFungi:YMR197C GeneID:855237
KEGG:sce:YMR197C OMA:MIRMAND NextBio:978783 Genevestigator:Q04338
GermOnline:YMR197C Uniprot:Q04338
Length = 217
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 53/184 (28%), Positives = 91/184 (49%)
Query: 1 MSQVFEGYERQYCELSAGLSR-KCTAASALDGELKKQK--LSEIKTGLDDADALIRKMDL 57
MS + YE + L + K + A A L ++ L ++ D+ L+ +MD+
Sbjct: 1 MSSLLISYESDF---KTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDV 57
Query: 58 EARSL--QPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMV 115
E + + +A +KLRE+K +++++KR V+ RD L G +A +
Sbjct: 58 EVNNSIGDASERATYKAKLREWK---KTIQSDIKRPLQSLVDSGDRDRLF--GDLNASNI 112
Query: 116 SADQRGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSLLHAHNTVCPS 175
DQR +LL + L S DR+K++ R ETE +G I+ DL QR++L +A T+ +
Sbjct: 113 DDDQRQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQTLFQA 172
Query: 176 SSLI 179
S +
Sbjct: 173 DSYV 176
>UNIPROTKB|A0JNE7 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005484 "SNAP receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 GO:GO:0005794 GO:GO:0006886 GO:GO:0016020
GO:GO:0042147 SUPFAM:SSF47661 KO:K08493 CTD:143187
OrthoDB:EOG4V6ZHV GeneTree:ENSGT00530000063466 EMBL:DAAA02059233
EMBL:DAAA02059234 EMBL:DAAA02059235 EMBL:BC126647 IPI:IPI00695361
RefSeq:NP_001073260.1 UniGene:Bt.102434 SMR:A0JNE7 STRING:A0JNE7
Ensembl:ENSBTAT00000008830 GeneID:780850 KEGG:bta:780850
eggNOG:NOG289196 HOGENOM:HOG000234352 HOVERGEN:HBG070970
InParanoid:A0JNE7 OMA:SESQVEC NextBio:20924514 Uniprot:A0JNE7
Length = 117
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 34/105 (32%), Positives = 60/105 (57%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELL 105
+ P + M +++R YK ++ L+ + KR ++ R+ELL
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEV-RNELL 104
>ZFIN|ZDB-GENE-040426-1148 [details] [associations]
symbol:vti1b "vesicle transport through
interaction with t-SNAREs homolog 1B (yeast)" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
SMART:SM00397 ZFIN:ZDB-GENE-040426-1148 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 SUPFAM:SSF47661 HOGENOM:HOG000116573
KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490 HOVERGEN:HBG058837
OrthoDB:EOG4M399K OMA:MMSKLRT EMBL:BX470227 EMBL:BC055131
IPI:IPI00498607 RefSeq:NP_957330.1 UniGene:Dr.82463 SMR:Q7SY45
STRING:Q7SY45 Ensembl:ENSDART00000057379 GeneID:394011
KEGG:dre:394011 InParanoid:Q7SY45 NextBio:20814976 Uniprot:Q7SY45
Length = 225
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 40/166 (24%), Positives = 79/166 (47%)
Query: 2 SQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARS 61
S+ FE Y L + GE +K+ + + + +A+ +++ M+ E
Sbjct: 3 SEEFEKLHEMYKSLYDEVKLMPERVQKSQGEERKRIVRDFDERVSEAEEVLQGMEQELFG 62
Query: 62 LQPNVKAMLLSKLREYKTDLNNLKNEVK-RVTSGNVNQAARDEL-LESGMADAMMVSADQ 119
+ + + +K+R Y+ DL L+ +++ T G Q L + + D Q
Sbjct: 63 APSSFRTPMSTKIRLYRRDLAKLQRDIRLSATPGLTGQLGDSRLGVYASQNDQSTHLQSQ 122
Query: 120 RGRLLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSL 165
R L+ TE LN+++ I+ S+R ET+++G I+++L +QR+ L
Sbjct: 123 RALLIQGTESLNNASKSIERSQRIAAETDQIGTDIIEELGEQREQL 168
>UNIPROTKB|F1S5K8 [details] [associations]
symbol:F1S5K8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 SUPFAM:SSF47661
GeneTree:ENSGT00530000063466 OMA:SESQVEC EMBL:CU468154
Ensembl:ENSSSCT00000011631 Uniprot:F1S5K8
Length = 101
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 30/94 (31%), Positives = 55/94 (58%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNE-VKRVTS 93
+ P + M +++R YK ++ L+ + V ++ S
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETDFVSQIPS 94
>DICTYBASE|DDB_G0292974 [details] [associations]
symbol:vti1A "v-SNARE family protein" species:44689
"Dictyostelium discoideum" [GO:0031201 "SNARE complex"
evidence=IDA] [GO:0000331 "contractile vacuole" evidence=IDA]
[GO:0032010 "phagolysosome" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;IDA] [GO:0010008
"endosome membrane" evidence=IEA;IDA] [GO:0006906 "vesicle fusion"
evidence=IDA] [GO:0005768 "endosome" evidence=IEA;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030665 "clathrin-coated vesicle membrane" evidence=IEA]
[GO:0030658 "transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
dictyBase:DDB_G0292974 GO:GO:0016021 GO:GO:0006886
GenomeReviews:CM000155_GR GO:GO:0005789 EMBL:AAFI02000197
GO:GO:0010008 GO:GO:0032010 GO:GO:0000331 GO:GO:0030658
GO:GO:0030665 GO:GO:0031201 GO:GO:0006906 SUPFAM:SSF47661
eggNOG:NOG239679 KO:K08493 RefSeq:XP_629410.1
ProteinModelPortal:Q54CK6 IntAct:Q54CK6 STRING:Q54CK6 PRIDE:Q54CK6
EnsemblProtists:DDB0231536 GeneID:8628929 KEGG:ddi:DDB_G0292974
OMA:FERTEQN ProtClustDB:CLSZ2429346 Uniprot:Q54CK6
Length = 217
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 42/163 (25%), Positives = 81/163 (49%)
Query: 4 VFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEARSLQ 63
VFE E+ + + ++R+ GE KK + E++ +D+A I +M+ A++
Sbjct: 3 VFERTEQNFQHVCNSITRRIKQLPNYGGEKKKIAVREVENDIDEALKFISEMEKLAQNHP 62
Query: 64 PNVKAMLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSAD-QRGR 122
+K L +K ++Y +D+ K EV+ + NQ + S D D QR
Sbjct: 63 QRIK--LQTKTKQYHSDIQKYKREVQLAQLQSSNQTNSNPW--SNAPDDYQSQYDNQRQH 118
Query: 123 LLMSTERLNHSTDRIKESRRTMLETEELGVSILQDLHQQRQSL 165
LL + L+ ++DR+ + + ++E++G +IL DL +Q + +
Sbjct: 119 LLQGSNMLDSTSDRLLRTHQISAQSEQIGQNILMDLGKQGEQI 161
>UNIPROTKB|F1N1Z0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00708043
UniGene:Bt.2175 OMA:MMSKLRT EMBL:DAAA02029474
Ensembl:ENSBTAT00000002532 Uniprot:F1N1Z0
Length = 232
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R + + ++SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLIRDFDEKQQEANETLAEMEEELRYAPLSFRNPMMSKLRTYRKDLAKLHREV-RS 97
Query: 92 TSGNVNQAARDELLESGMA---DAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETE 148
T AR ++ A + M QR LL T+ LN +T I+ S R ET+
Sbjct: 98 TPLTATPGARGDMKYGTYAVENEHMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETD 157
Query: 149 ELGVSILQDLHQQRQSL 165
++G I+++L +QR L
Sbjct: 158 QIGSEIIEELGEQRDQL 174
>UNIPROTKB|Q2KIU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0006886 GO:GO:0016192 GO:GO:0012505 GO:GO:0005622
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 EMBL:BC112511
IPI:IPI00708043 RefSeq:NP_001073115.1 UniGene:Bt.2175
ProteinModelPortal:Q2KIU0 SMR:Q2KIU0 STRING:Q2KIU0 PRIDE:Q2KIU0
GeneID:780809 KEGG:bta:780809 CTD:10490 eggNOG:NOG291765
HOVERGEN:HBG058837 InParanoid:Q2KIU0 OrthoDB:EOG4M399K
NextBio:20924499 Uniprot:Q2KIU0
Length = 232
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R + + ++SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLIRDFDEKQQEANETLAEMEEELRYAPLSFRNPMMSKLRTYRKDLAKLHREV-RS 97
Query: 92 TSGNVNQAARDELLESGMA---DAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETE 148
T AR ++ A + M QR LL T+ LN +T I+ S R ET+
Sbjct: 98 TPLTATPGARGDMKYGTYAVENEHMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETD 157
Query: 149 ELGVSILQDLHQQRQSL 165
++G I+++L +QR L
Sbjct: 158 QIGSEIIEELGEQRDQL 174
>UNIPROTKB|Q9UEU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0006904
"vesicle docking involved in exocytosis" evidence=TAS] [GO:0006944
"cellular membrane fusion" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0005794 GO:GO:0006886 GO:GO:0008283 GO:GO:0012505
GO:GO:0006944 GO:GO:0031201 GO:GO:0006904 PDB:2V8S PDBsum:2V8S
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 CTD:10490
eggNOG:NOG291765 HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AF035824
EMBL:AF060902 EMBL:CR456757 EMBL:CR542095 EMBL:BT019348
EMBL:BC003142 IPI:IPI00063784 IPI:IPI00386818 RefSeq:NP_006361.1
UniGene:Hs.741177 ProteinModelPortal:Q9UEU0 SMR:Q9UEU0
IntAct:Q9UEU0 MINT:MINT-1429590 STRING:Q9UEU0 PhosphoSite:Q9UEU0
DMDM:126302613 PaxDb:Q9UEU0 PRIDE:Q9UEU0 DNASU:10490
Ensembl:ENST00000554659 GeneID:10490 KEGG:hsa:10490 UCSC:uc001xjt.3
GeneCards:GC14M068117 HGNC:HGNC:17793 MIM:603207 neXtProt:NX_Q9UEU0
PharmGKB:PA134861090 InParanoid:Q9UEU0 OMA:MMSKLRT PhylomeDB:Q9UEU0
ChiTaRS:VTI1B EvolutionaryTrace:Q9UEU0 GenomeRNAi:10490
NextBio:39804 ArrayExpress:Q9UEU0 Bgee:Q9UEU0 Genevestigator:Q9UEU0
GermOnline:ENSG00000100568 Uniprot:Q9UEU0
Length = 232
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R + + ++SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLIRDFDEKQQEANETLAEMEEELRYAPLSFRNPMMSKLRNYRKDLAKLHREV-RS 97
Query: 92 TSGNVNQAARDELLESGMA---DAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETE 148
T R ++ A + M QR LL TE LN +T I+ S R ET+
Sbjct: 98 TPLTATPGGRGDMKYGIYAVENEHMNRLQSQRAMLLQGTESLNRATQSIERSHRIATETD 157
Query: 149 ELGVSILQDLHQQRQSL 165
++G I+++L +QR L
Sbjct: 158 QIGSEIIEELGEQRDQL 174
>UNIPROTKB|E2R276 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 SUPFAM:SSF47661
GeneTree:ENSGT00530000063466 EMBL:AAEX03015533
Ensembl:ENSCAFT00000017491 Uniprot:E2R276
Length = 95
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FEGYE+ + L+A ++ K L + KKQ ++ ++ L++A L+ +MDLE R
Sbjct: 1 MSSDFEGYEQDFAVLTAEITGKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLKNE 87
+ P + M +++R YK ++ L+ +
Sbjct: 61 EIPPQSRGMYSNRMRSYKQEMGKLETD 87
>MGI|MGI:1855688 [details] [associations]
symbol:Vti1b "vesicle transport through interaction with
t-SNAREs 1B" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
MGI:MGI:1855688 GO:GO:0016021 GO:GO:0005794 GO:GO:0048471
GO:GO:0006886 GO:GO:0016192 SUPFAM:SSF47661 PDB:1GL2 PDBsum:1GL2
HOGENOM:HOG000116573 eggNOG:NOG291765 HOVERGEN:HBG058837
OrthoDB:EOG4M399K ChiTaRS:VTI1B EMBL:AF035208 IPI:IPI00130115
UniGene:Mm.265929 PDB:2QYW PDBsum:2QYW ProteinModelPortal:O88384
SMR:O88384 DIP:DIP-32212N IntAct:O88384 STRING:O88384
PhosphoSite:O88384 PaxDb:O88384 PRIDE:O88384 InParanoid:O88384
EvolutionaryTrace:O88384 Genevestigator:O88384
GermOnline:ENSMUSG00000021124 Uniprot:O88384
Length = 232
Score = 146 (56.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R + ++SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLVRDFDENQQEANETLAEMEEELRYAPLTFRNPMMSKLRNYRKDLAKLHREV-RS 97
Query: 92 TSGNVNQAARDEL------LESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTML 145
T R +L LE+ + + QR LL TE LN +T I+ S R
Sbjct: 98 TPLTAAPGGRGDLKYGTYTLENEHLNRLQ---SQRALLLQGTESLNRATQSIERSHRIAT 154
Query: 146 ETEELGVSILQDLHQQRQSL 165
ET+++G I+++L +QR L
Sbjct: 155 ETDQIGTEIIEELGEQRDQL 174
>UNIPROTKB|E1BYU9 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
GO:GO:0005622 SUPFAM:SSF47661 GeneTree:ENSGT00530000063466
EMBL:AADN02030905 IPI:IPI00593619 Ensembl:ENSGALT00000014430
Uniprot:E1BYU9
Length = 95
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 1 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQKLSEIKTGLDDADALIRKMDLEAR 60
MS FE YE+ + L+A ++ + L G+ KKQ ++ I+ L++A L+ +M+LE R
Sbjct: 1 MSSDFESYEQDFAVLTADITGRIGRVPKLLGDEKKQMVANIEKQLEEARELLEQMELEVR 60
Query: 61 SLQPNVKAMLLSKLREYKTDLNNLK 85
+ P + M S++R YK ++ L+
Sbjct: 61 EIPPQSRGMYSSRMRSYKQEMGKLE 85
>RGD|1560475 [details] [associations]
symbol:RGD1560475 "similar to vesicle transport through
interaction with t-SNAREs 1B homolog" species:10116 "Rattus
norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 145 (56.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R + ++SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNSMMSKLRNYRKDLAKLHREV-RS 97
Query: 92 TSGNVNQAARDEL------LESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTML 145
T R +L LE+ + + QR LL TE LN +T I+ S R
Sbjct: 98 TPLTATPGGRGDLKFGTYTLENEHLNRLQ---SQRALLLQGTESLNRATQSIERSHRIAA 154
Query: 146 ETEELGVSILQDLHQQRQSL 165
ET+++G I+++L +QR L
Sbjct: 155 ETDQIGSEIIEELGEQRDQL 174
>UNIPROTKB|P58200 [details] [associations]
symbol:Vti1b "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
RGD:1560475 GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 145 (56.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R + ++SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRNSMMSKLRNYRKDLAKLHREV-RS 97
Query: 92 TSGNVNQAARDEL------LESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTML 145
T R +L LE+ + + QR LL TE LN +T I+ S R
Sbjct: 98 TPLTATPGGRGDLKFGTYTLENEHLNRLQ---SQRALLLQGTESLNRATQSIERSHRIAA 154
Query: 146 ETEELGVSILQDLHQQRQSL 165
ET+++G I+++L +QR L
Sbjct: 155 ETDQIGSEIIEELGEQRDQL 174
>UNIPROTKB|E1BUX5 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490
OMA:MMSKLRT EMBL:AADN02003184 IPI:IPI00572560 RefSeq:XP_421192.1
Ensembl:ENSGALT00000015509 GeneID:423273 KEGG:gga:423273
NextBio:20825766 Uniprot:E1BUX5
Length = 232
Score = 142 (55.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 37/137 (27%), Positives = 71/137 (51%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + E +A+ +R+M+ E + + ++SK+R Y+ DL+ + E+K
Sbjct: 39 EEKKKLIREFDEKQREANETLREMEEELKYAPLPFRNQMMSKIRAYRRDLSMFQREMKNT 98
Query: 92 TSGNVNQAARDELLESGMADAMMVSAD---QRGRLLMSTERLNHSTDRIKESRRTMLETE 148
G + ++ ++ + S + QR LL TE LN ++ I+ S R ET+
Sbjct: 99 DLG-LGPGSQGDMKYGIFSTENEQSTNLQSQRVLLLQGTESLNRASQSIERSHRIAAETD 157
Query: 149 ELGVSILQDLHQQRQSL 165
++G I+++L +QR+ L
Sbjct: 158 QIGTDIIEELGEQREQL 174
>UNIPROTKB|F1SA25 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0005794
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 SUPFAM:SSF47661
GeneTree:ENSGT00530000063466 OMA:MMSKLRT EMBL:CT868701
Ensembl:ENSSSCT00000002556 Uniprot:F1SA25
Length = 232
Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/137 (29%), Positives = 67/137 (48%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R + + ++SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLIRDFDEKQQEANETLAEMEEELRYAPLSFRNPMMSKLRTYRKDLAKLHREV-RS 97
Query: 92 TSGNVNQAARDELLESGMA---DAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETE 148
T R ++ A + M QR LL T+ LN +T I+ S R ET+
Sbjct: 98 TPLTAAPGGRGDMKYGTYAVEDEHMNRLQSQRVLLLQGTDSLNRATQSIERSHRIAAETD 157
Query: 149 ELGVSILQDLHQQRQSL 165
++G I+++L +QR L
Sbjct: 158 QIGSEIIEELGEQRDQL 174
>RGD|2323682 [details] [associations]
symbol:LOC100359512 "vesicle transport through interaction with
t-SNAREs 1B-like" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
RGD:2323682 GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00948301
Ensembl:ENSRNOT00000015814 ArrayExpress:F1LNC4 Uniprot:F1LNC4
Length = 231
Score = 137 (53.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KK+ + + +A+ + +M+ E R P +SKLR Y+ DL L EV R
Sbjct: 39 EEKKKLVRDFDEKQQEANETLAEMEEELR-YAPLTFRNSMSKLRNYRKDLAKLHREV-RS 96
Query: 92 TSGNVNQAARDEL------LESGMADAMMVSADQRGRLLMSTERLNHSTDRIKESRRTML 145
T R +L LE+ + + QR LL TE LN +T I+ S R
Sbjct: 97 TPLTATPGGRGDLKFGTYTLENEHLNRLQ---SQRALLLQGTESLNRATQSIERSHRIAA 153
Query: 146 ETEELGVSILQDLHQQRQSL 165
ET+++G I+++L +QR L
Sbjct: 154 ETDQIGSEIIEELGEQRDQL 173
>UNIPROTKB|J9NYA0 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 OMA:MMSKLRT
EMBL:AAEX03015851 Ensembl:ENSCAFT00000012309 Uniprot:J9NYA0
Length = 232
Score = 137 (53.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 40/137 (29%), Positives = 65/137 (47%)
Query: 32 ELKKQKLSEIKTGLDDADALIRKMDLEARSLQPNVKAMLLSKLREYKTDLNNLKNEVKRV 91
E KKQ + + +A+A + +M+ E R + + ++SKLR Y+ DL EV
Sbjct: 39 EEKKQLIRDFDEKQQEANATLAEMEEELRYAPLSFRNPMMSKLRTYRKDLAKPHREVSS- 97
Query: 92 TSGNVNQAARDELLESGMA---DAMMVSADQRGRLLMSTERLNHSTDRIKESRRTMLETE 148
T R ++ A + M QR LL T+ LN +T I+ S R ET+
Sbjct: 98 TPLTATPGGRGDMKYGSYAVENEHMTRLQSQRALLLQGTDSLNRATRSIERSHRIATETD 157
Query: 149 ELGVSILQDLHQQRQSL 165
++G I+++L +Q L
Sbjct: 158 QIGSEIIEELGEQCDQL 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 203 203 0.00092 111 3 11 22 0.36 33
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 595 (63 KB)
Total size of DFA: 151 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.70u 0.15s 21.85t Elapsed: 00:00:01
Total cpu time: 21.70u 0.15s 21.85t Elapsed: 00:00:01
Start: Mon May 20 19:07:06 2013 End: Mon May 20 19:07:07 2013