Query 028808
Match_columns 203
No_of_seqs 210 out of 1151
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 03:56:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028808.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028808hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uma_A Hypothetical peroxiredo 100.0 1.1E-38 3.7E-43 257.4 14.9 162 29-203 20-184 (184)
2 3mng_A Peroxiredoxin-5, mitoch 100.0 2.2E-38 7.4E-43 253.3 15.8 158 30-203 10-173 (173)
3 2xhf_A Peroxiredoxin 5; oxidor 100.0 5.7E-38 1.9E-42 251.0 15.4 158 33-203 12-169 (171)
4 4f82_A Thioredoxin reductase; 100.0 1.2E-37 4.1E-42 250.1 15.2 164 33-203 8-174 (176)
5 2pwj_A Mitochondrial peroxired 100.0 4.3E-37 1.5E-41 244.3 15.0 159 45-203 13-171 (171)
6 4g2e_A Peroxiredoxin; redox pr 100.0 1.4E-36 4.9E-41 237.6 12.3 148 34-201 3-151 (157)
7 4gqc_A Thiol peroxidase, perox 100.0 4.1E-37 1.4E-41 242.9 9.1 149 34-202 4-154 (164)
8 1xiy_A Peroxiredoxin, pfaop; a 100.0 5.7E-36 2E-40 241.5 13.8 162 35-203 1-177 (182)
9 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 1.5E-35 5.2E-40 234.9 14.3 155 33-203 1-159 (167)
10 1tp9_A Peroxiredoxin, PRX D (t 100.0 9.3E-35 3.2E-39 228.0 15.0 157 32-203 1-162 (162)
11 3tue_A Tryparedoxin peroxidase 100.0 1.4E-34 4.9E-39 239.4 14.8 148 33-202 24-179 (219)
12 3sbc_A Peroxiredoxin TSA1; alp 100.0 7.2E-35 2.5E-39 240.8 10.7 149 31-202 19-175 (216)
13 1nm3_A Protein HI0572; hybrid, 100.0 3.8E-32 1.3E-36 225.4 14.3 156 33-203 1-162 (241)
14 4h86_A Peroxiredoxin type-2; o 100.0 1.8E-31 6E-36 216.9 15.6 169 29-203 20-199 (199)
15 3ixr_A Bacterioferritin comigr 100.0 2.5E-31 8.6E-36 211.7 8.9 153 32-202 18-172 (179)
16 3keb_A Probable thiol peroxida 100.0 7.3E-30 2.5E-34 211.9 15.3 144 33-202 20-170 (224)
17 1xcc_A 1-Cys peroxiredoxin; un 100.0 1.1E-30 3.9E-35 215.6 9.1 148 33-202 1-160 (220)
18 1q98_A Thiol peroxidase, TPX; 100.0 1.6E-29 5.4E-34 198.3 13.9 147 33-203 15-164 (165)
19 3gkn_A Bacterioferritin comigr 100.0 4.2E-30 1.5E-34 199.7 9.9 150 31-202 3-156 (163)
20 3p7x_A Probable thiol peroxida 100.0 8.9E-30 3E-34 199.7 11.8 144 33-203 18-163 (166)
21 1prx_A HORF6; peroxiredoxin, h 100.0 5.6E-30 1.9E-34 212.0 10.9 146 34-202 4-163 (224)
22 3zrd_A Thiol peroxidase; oxido 100.0 1.7E-29 5.9E-34 205.2 12.5 147 33-203 50-199 (200)
23 2v2g_A Peroxiredoxin 6; oxidor 100.0 5.5E-30 1.9E-34 213.6 9.6 148 33-202 1-159 (233)
24 4eo3_A Bacterioferritin comigr 100.0 7.1E-30 2.4E-34 222.1 10.6 131 44-203 3-134 (322)
25 3tjj_A Peroxiredoxin-4; thiore 100.0 2.6E-29 9E-34 211.9 12.9 147 32-202 59-214 (254)
26 1psq_A Probable thiol peroxida 100.0 4.5E-29 1.5E-33 195.1 11.8 142 33-202 14-159 (163)
27 3qpm_A Peroxiredoxin; oxidored 100.0 4.2E-29 1.4E-33 208.7 11.8 147 32-202 45-200 (240)
28 3drn_A Peroxiredoxin, bacterio 100.0 1E-28 3.6E-33 192.4 12.3 141 34-202 1-143 (161)
29 2c0d_A Thioredoxin peroxidase 100.0 1.4E-28 4.9E-33 203.1 13.8 147 32-202 22-178 (221)
30 3a2v_A Probable peroxiredoxin; 100.0 5E-29 1.7E-33 209.9 11.2 143 34-201 4-155 (249)
31 2pn8_A Peroxiredoxin-4; thiore 100.0 6.4E-29 2.2E-33 203.4 11.1 149 30-202 14-171 (211)
32 2yzh_A Probable thiol peroxida 100.0 8.1E-29 2.8E-33 194.8 11.0 146 33-202 19-166 (171)
33 1n8j_A AHPC, alkyl hydroperoxi 100.0 2.4E-28 8.1E-33 195.8 11.6 143 36-202 2-150 (186)
34 1uul_A Tryparedoxin peroxidase 99.9 6.7E-28 2.3E-32 194.9 11.8 147 32-202 3-159 (202)
35 2a4v_A Peroxiredoxin DOT5; yea 99.9 3.2E-28 1.1E-32 189.0 9.2 132 32-187 4-137 (159)
36 2i81_A 2-Cys peroxiredoxin; st 99.9 8.6E-28 3E-32 196.9 12.1 147 32-202 18-174 (213)
37 1we0_A Alkyl hydroperoxide red 99.9 4E-27 1.4E-31 187.6 15.0 134 35-188 1-140 (187)
38 1xvw_A Hypothetical protein RV 99.9 1.5E-27 5E-32 184.5 11.6 142 35-202 9-154 (160)
39 1zye_A Thioredoxin-dependent p 99.9 2.4E-27 8.3E-32 195.0 13.5 146 33-201 25-178 (220)
40 2h01_A 2-Cys peroxiredoxin; th 99.9 2.8E-27 9.7E-32 189.4 13.1 142 36-201 1-152 (192)
41 1qmv_A Human thioredoxin perox 99.9 1.9E-27 6.6E-32 191.3 11.4 146 33-202 3-157 (197)
42 3ztl_A Thioredoxin peroxidase; 99.9 5.4E-27 1.8E-31 193.0 13.3 146 32-202 37-192 (222)
43 1zof_A Alkyl hydroperoxide-red 99.9 9.5E-27 3.3E-31 187.2 13.9 140 35-201 1-154 (198)
44 3u5r_E Uncharacterized protein 99.9 5.3E-27 1.8E-31 192.3 11.4 126 32-186 29-163 (218)
45 2bmx_A Alkyl hydroperoxidase C 99.9 1.8E-26 6E-31 185.4 13.6 151 33-202 2-164 (195)
46 1xvq_A Thiol peroxidase; thior 99.9 3.4E-26 1.2E-30 181.0 13.6 146 33-203 16-163 (175)
47 2jsy_A Probable thiol peroxida 99.9 1.4E-26 4.8E-31 180.7 9.0 143 33-202 16-161 (167)
48 1xzo_A BSSCO, hypothetical pro 99.9 2.8E-25 9.6E-30 173.4 14.5 137 32-187 4-156 (174)
49 2ywi_A Hypothetical conserved 99.9 1.4E-25 4.6E-30 178.8 12.0 126 32-186 15-150 (196)
50 3ewl_A Uncharacterized conserv 99.9 1.6E-25 5.5E-30 169.3 11.2 130 36-202 2-138 (142)
51 3gl3_A Putative thiol:disulfid 99.9 7.9E-25 2.7E-29 167.1 14.2 124 33-187 1-126 (152)
52 2lrn_A Thiol:disulfide interch 99.9 4.7E-25 1.6E-29 169.3 13.0 122 33-184 1-127 (152)
53 4fo5_A Thioredoxin-like protei 99.9 3.1E-26 1.1E-30 174.2 5.8 133 33-203 5-143 (143)
54 2gs3_A PHGPX, GPX-4, phospholi 99.9 3.3E-25 1.1E-29 176.6 11.5 143 25-186 13-171 (185)
55 3kcm_A Thioredoxin family prot 99.9 7.1E-25 2.4E-29 167.7 12.6 137 35-203 2-141 (154)
56 3fw2_A Thiol-disulfide oxidore 99.9 2.8E-25 9.4E-30 170.2 10.3 122 33-184 3-134 (150)
57 3eur_A Uncharacterized protein 99.9 3.8E-25 1.3E-29 168.0 10.1 131 34-201 4-141 (142)
58 1jfu_A Thiol:disulfide interch 99.9 3.8E-25 1.3E-29 175.1 10.2 133 29-186 28-163 (186)
59 3hcz_A Possible thiol-disulfid 99.9 8E-25 2.7E-29 165.5 11.1 134 33-202 3-140 (148)
60 3lwa_A Secreted thiol-disulfid 99.9 1.6E-24 5.4E-29 171.3 12.0 126 34-186 30-166 (183)
61 3eyt_A Uncharacterized protein 99.9 6.7E-25 2.3E-29 168.7 9.2 120 37-186 2-137 (158)
62 2v1m_A Glutathione peroxidase; 99.9 1.6E-24 5.3E-29 168.1 11.3 128 34-186 4-152 (169)
63 2obi_A PHGPX, GPX-4, phospholi 99.9 9.4E-25 3.2E-29 173.3 10.1 136 32-186 18-169 (183)
64 2cvb_A Probable thiol-disulfid 99.9 3.1E-24 1.1E-28 170.3 11.9 119 33-182 5-132 (188)
65 2f9s_A Thiol-disulfide oxidore 99.9 4.8E-24 1.7E-28 163.0 11.8 121 36-186 1-123 (151)
66 2p31_A CL683, glutathione pero 99.9 7E-25 2.4E-29 174.1 7.4 132 32-186 20-166 (181)
67 3lor_A Thiol-disulfide isomera 99.9 1.6E-24 5.4E-29 166.7 8.1 121 36-186 4-140 (160)
68 3kh7_A Thiol:disulfide interch 99.9 4.9E-24 1.7E-28 168.7 10.3 131 24-186 19-152 (176)
69 3hdc_A Thioredoxin family prot 99.9 2.6E-24 9E-29 166.3 8.4 126 31-188 11-137 (158)
70 2p5q_A Glutathione peroxidase 99.9 4.4E-24 1.5E-28 165.7 9.6 125 34-186 5-153 (170)
71 2vup_A Glutathione peroxidase- 99.9 1.5E-24 5.1E-29 173.5 6.7 139 24-186 11-170 (190)
72 3fkf_A Thiol-disulfide oxidore 99.9 7.6E-24 2.6E-28 160.1 9.8 122 33-184 3-132 (148)
73 2lja_A Putative thiol-disulfid 99.9 1.8E-23 6.2E-28 159.5 11.3 137 33-202 1-140 (152)
74 2lrt_A Uncharacterized protein 99.9 8.2E-24 2.8E-28 163.3 9.4 121 34-186 8-133 (152)
75 2i3y_A Epididymal secretory gl 99.9 6.4E-24 2.2E-28 174.9 8.7 126 45-186 35-196 (215)
76 2ggt_A SCO1 protein homolog, m 99.9 1.8E-23 6.1E-28 161.4 10.6 127 45-186 3-146 (164)
77 3me7_A Putative uncharacterize 99.9 1.4E-23 4.8E-28 165.5 9.9 133 36-187 2-147 (170)
78 2l5o_A Putative thioredoxin; s 99.9 3.3E-23 1.1E-27 158.2 11.6 122 35-186 2-126 (153)
79 3dwv_A Glutathione peroxidase- 99.9 1.4E-24 4.8E-29 173.4 4.1 138 30-186 15-168 (187)
80 3erw_A Sporulation thiol-disul 99.9 3.1E-23 1.1E-27 155.9 10.7 124 32-186 6-134 (145)
81 2b7k_A SCO1 protein; metalloch 99.9 2.5E-23 8.4E-28 168.1 10.7 138 32-186 10-164 (200)
82 2ls5_A Uncharacterized protein 99.8 3.8E-25 1.3E-29 170.7 0.0 125 34-186 6-134 (159)
83 3kij_A Probable glutathione pe 99.9 5.7E-24 1.9E-28 168.5 6.5 128 35-187 12-156 (180)
84 3or5_A Thiol:disulfide interch 99.9 3.5E-23 1.2E-27 159.6 10.8 129 33-186 6-136 (165)
85 2rli_A SCO2 protein homolog, m 99.9 6.8E-23 2.3E-27 159.4 12.4 127 45-186 5-149 (171)
86 2f8a_A Glutathione peroxidase 99.9 2.1E-23 7.2E-28 170.3 9.7 133 35-186 20-192 (208)
87 2r37_A Glutathione peroxidase 99.9 1.7E-23 5.7E-28 171.2 8.9 126 45-186 17-178 (207)
88 3raz_A Thioredoxin-related pro 99.9 1.1E-23 3.6E-28 161.5 7.0 129 45-202 5-137 (151)
89 3ha9_A Uncharacterized thiored 99.9 1.7E-23 5.7E-28 162.4 7.2 134 33-203 9-162 (165)
90 2k6v_A Putative cytochrome C o 99.9 2.6E-23 9E-28 161.6 7.9 134 33-186 8-156 (172)
91 3cmi_A Peroxiredoxin HYR1; thi 99.9 1.1E-23 3.7E-28 165.3 5.3 121 45-186 12-153 (171)
92 2b5x_A YKUV protein, TRXY; thi 99.9 6E-23 2.1E-27 154.9 8.7 121 35-186 1-130 (148)
93 2b1k_A Thiol:disulfide interch 99.9 1.8E-22 6E-27 157.0 10.4 125 29-186 16-145 (168)
94 1lu4_A Soluble secreted antige 99.9 2.4E-22 8.3E-27 149.7 10.8 112 44-184 3-116 (136)
95 2hyx_A Protein DIPZ; thioredox 99.9 1.3E-22 4.3E-27 178.5 10.7 125 32-186 48-184 (352)
96 3ia1_A THIO-disulfide isomeras 99.9 8.7E-23 3E-27 156.2 8.4 130 34-201 4-140 (154)
97 4evm_A Thioredoxin family prot 99.9 1.7E-22 6E-27 149.5 9.7 129 45-203 2-137 (138)
98 1zzo_A RV1677; thioredoxin fol 99.9 1.8E-21 6.3E-26 144.4 10.3 114 45-186 5-120 (136)
99 4hde_A SCO1/SENC family lipopr 99.9 8.6E-21 2.9E-25 149.9 13.7 142 37-201 8-163 (170)
100 1i5g_A Tryparedoxin II; electr 99.8 8.5E-22 2.9E-26 149.5 5.6 121 37-186 3-129 (144)
101 2h30_A Thioredoxin, peptide me 99.8 1.6E-21 5.5E-26 150.3 4.2 133 35-202 14-153 (164)
102 2lus_A Thioredoxion; CR-Trp16, 99.7 3.9E-22 1.3E-26 150.3 0.0 120 45-186 4-128 (143)
103 1kng_A Thiol:disulfide interch 99.8 6.6E-21 2.3E-25 145.5 6.6 131 31-186 4-137 (156)
104 3s9f_A Tryparedoxin; thioredox 99.8 9.2E-22 3.2E-26 154.2 1.4 132 24-185 11-148 (165)
105 1o8x_A Tryparedoxin, TRYX, TXN 99.8 1.3E-20 4.5E-25 143.4 5.0 121 36-186 3-129 (146)
106 1o73_A Tryparedoxin; electron 99.8 3.1E-20 1.1E-24 140.4 2.8 120 36-185 3-128 (144)
107 2l57_A Uncharacterized protein 99.3 4.2E-13 1.4E-17 99.3 2.5 78 73-186 24-102 (126)
108 2fwh_A Thiol:disulfide interch 99.3 1.5E-13 5.2E-18 103.4 -1.9 101 36-185 5-112 (134)
109 2ju5_A Thioredoxin disulfide i 99.3 4.9E-13 1.7E-17 103.2 0.5 94 65-187 38-136 (154)
110 3fk8_A Disulphide isomerase; A 99.2 1.9E-11 6.5E-16 91.0 6.1 97 74-202 28-130 (133)
111 3ul3_B Thioredoxin, thioredoxi 99.2 2.9E-11 9.9E-16 89.8 6.8 82 65-185 33-114 (128)
112 3hxs_A Thioredoxin, TRXP; elec 99.1 1.1E-10 3.9E-15 87.4 7.2 93 65-201 42-135 (141)
113 2voc_A Thioredoxin; electron t 99.1 3.6E-10 1.2E-14 81.8 9.5 75 74-186 16-90 (112)
114 3f9u_A Putative exported cytoc 99.1 6.1E-12 2.1E-16 98.0 -1.8 107 65-186 38-150 (172)
115 2kuc_A Putative disulphide-iso 99.0 1E-10 3.4E-15 86.5 2.5 85 65-186 18-106 (130)
116 3f3q_A Thioredoxin-1; His TAG, 99.0 2E-10 6.7E-15 83.1 4.0 74 74-186 23-96 (109)
117 3die_A Thioredoxin, TRX; elect 99.0 8.5E-10 2.9E-14 78.0 7.2 86 74-201 18-103 (106)
118 1nsw_A Thioredoxin, TRX; therm 99.0 7.4E-10 2.5E-14 78.5 6.5 75 74-186 16-90 (105)
119 1t00_A Thioredoxin, TRX; redox 99.0 1.7E-09 6E-14 77.5 8.0 75 74-186 22-96 (112)
120 4euy_A Uncharacterized protein 99.0 5.1E-10 1.8E-14 79.9 5.0 74 74-186 17-90 (105)
121 3d6i_A Monothiol glutaredoxin- 99.0 1.4E-09 4.8E-14 78.2 7.2 75 75-186 21-95 (112)
122 1dby_A Chloroplast thioredoxin 98.9 9.1E-10 3.1E-14 78.3 5.2 75 74-186 18-92 (107)
123 2j23_A Thioredoxin; immune pro 98.9 1E-09 3.5E-14 80.7 5.4 76 74-186 32-107 (121)
124 3qfa_C Thioredoxin; protein-pr 98.9 4.9E-10 1.7E-14 81.9 3.5 74 74-186 30-103 (116)
125 2pu9_C TRX-F, thioredoxin F-ty 98.9 1.3E-09 4.5E-14 78.3 5.8 74 74-186 23-97 (111)
126 1thx_A Thioredoxin, thioredoxi 98.9 3E-09 1E-13 76.2 7.4 75 74-186 24-98 (115)
127 2ppt_A Thioredoxin-2; thiredox 98.9 1E-09 3.6E-14 84.7 5.3 75 74-186 63-137 (155)
128 1x5d_A Protein disulfide-isome 98.9 4.2E-09 1.4E-13 77.6 8.4 74 75-185 25-101 (133)
129 1xfl_A Thioredoxin H1; AT3G510 98.9 1.8E-09 6E-14 80.0 6.3 72 74-185 37-109 (124)
130 2l5l_A Thioredoxin; structural 98.9 8.7E-10 3E-14 82.7 4.6 67 77-180 39-106 (136)
131 3p2a_A Thioredoxin 2, putative 98.9 9.6E-10 3.3E-14 83.4 4.8 94 45-186 35-128 (148)
132 3qou_A Protein YBBN; thioredox 98.9 4.7E-09 1.6E-13 87.8 9.5 75 74-186 25-99 (287)
133 1z6n_A Hypothetical protein PA 98.9 5.1E-10 1.7E-14 88.2 3.0 48 68-121 48-95 (167)
134 1sen_A Thioredoxin-like protei 98.9 4E-11 1.4E-15 93.6 -3.4 102 65-202 37-142 (164)
135 1ep7_A Thioredoxin CH1, H-type 98.9 1.9E-09 6.5E-14 77.2 5.7 73 75-186 24-97 (112)
136 2dj1_A Protein disulfide-isome 98.9 1.8E-09 6.3E-14 80.5 5.8 68 74-178 33-102 (140)
137 3zzx_A Thioredoxin; oxidoreduc 98.9 2.1E-09 7.2E-14 78.0 5.8 74 74-186 19-92 (105)
138 2i4a_A Thioredoxin; acidophIle 98.9 5E-09 1.7E-13 74.1 7.6 75 74-186 19-93 (107)
139 1w4v_A Thioredoxin, mitochondr 98.9 2.6E-09 8.7E-14 78.2 6.2 75 74-186 30-104 (119)
140 2trx_A Thioredoxin; electron t 98.9 2.8E-09 9.6E-14 75.8 6.3 75 74-186 19-93 (108)
141 3gix_A Thioredoxin-like protei 98.9 8.2E-10 2.8E-14 84.8 3.7 73 74-185 22-95 (149)
142 2oe3_A Thioredoxin-3; electron 98.9 4.1E-09 1.4E-13 76.9 6.7 73 74-186 29-102 (114)
143 2o8v_B Thioredoxin 1; disulfid 98.9 2.4E-09 8.3E-14 79.8 5.5 75 74-186 39-113 (128)
144 2e0q_A Thioredoxin; electron t 98.9 3.9E-09 1.3E-13 73.9 6.1 74 74-186 15-88 (104)
145 1faa_A Thioredoxin F; electron 98.9 4E-09 1.4E-13 77.2 6.4 74 74-186 36-110 (124)
146 2dj0_A Thioredoxin-related tra 98.9 6.1E-09 2.1E-13 77.9 7.5 79 78-186 28-106 (137)
147 3d22_A TRXH4, thioredoxin H-ty 98.9 3.8E-09 1.3E-13 78.9 6.4 81 66-186 38-118 (139)
148 1syr_A Thioredoxin; SGPP, stru 98.8 6.4E-09 2.2E-13 75.0 7.2 84 74-202 25-109 (112)
149 1ti3_A Thioredoxin H, PTTRXH1; 98.8 3.4E-09 1.2E-13 75.9 5.5 74 74-186 25-98 (113)
150 3tco_A Thioredoxin (TRXA-1); d 98.8 5.3E-09 1.8E-13 74.1 6.4 75 74-186 20-94 (109)
151 1x5e_A Thioredoxin domain cont 98.8 3.4E-09 1.2E-13 77.9 5.5 71 71-179 19-89 (126)
152 1xwb_A Thioredoxin; dimerizati 98.8 6.4E-09 2.2E-13 73.4 6.7 73 74-185 19-92 (106)
153 2yzu_A Thioredoxin; redox prot 98.8 7.6E-09 2.6E-13 73.1 7.1 75 74-186 17-91 (109)
154 3emx_A Thioredoxin; structural 98.8 2.9E-09 1E-13 79.9 5.1 80 78-188 33-113 (135)
155 1fb6_A Thioredoxin M; electron 98.8 6E-09 2E-13 73.4 6.4 74 75-186 18-91 (105)
156 2vlu_A Thioredoxin, thioredoxi 98.8 5.6E-09 1.9E-13 76.1 6.3 73 74-186 33-106 (122)
157 3cxg_A Putative thioredoxin; m 98.8 3.9E-09 1.3E-13 79.1 5.5 77 69-186 35-115 (133)
158 2wz9_A Glutaredoxin-3; protein 98.8 6.7E-09 2.3E-13 79.5 6.9 74 74-186 31-104 (153)
159 2xc2_A Thioredoxinn; oxidoredu 98.8 3E-09 1E-13 77.2 4.6 71 74-185 32-103 (117)
160 1qgv_A Spliceosomal protein U5 98.8 4.2E-09 1.4E-13 80.2 5.5 74 75-186 23-96 (142)
161 2l6c_A Thioredoxin; oxidoreduc 98.8 9.7E-09 3.3E-13 74.1 6.6 74 74-186 18-91 (110)
162 3m9j_A Thioredoxin; oxidoreduc 98.8 7.4E-09 2.5E-13 73.1 5.9 74 74-186 19-92 (105)
163 2dml_A Protein disulfide-isome 98.8 7.8E-09 2.7E-13 76.1 6.2 72 75-184 35-107 (130)
164 2lst_A Thioredoxin; structural 98.3 6.5E-10 2.2E-14 82.1 0.0 85 65-186 10-101 (130)
165 2i1u_A Thioredoxin, TRX, MPT46 98.8 1.1E-08 3.9E-13 74.0 6.6 75 74-186 29-103 (121)
166 2f51_A Thioredoxin; electron t 98.8 7.3E-09 2.5E-13 75.9 5.6 74 75-187 23-100 (118)
167 2vim_A Thioredoxin, TRX; thior 98.8 1.1E-08 3.8E-13 71.9 6.3 73 74-185 18-90 (104)
168 1gh2_A Thioredoxin-like protei 98.8 1.3E-08 4.3E-13 72.6 6.3 74 74-186 20-93 (107)
169 1zma_A Bacterocin transport ac 98.8 1.3E-08 4.3E-13 74.1 6.4 78 74-185 28-105 (118)
170 3dxb_A Thioredoxin N-terminall 98.8 6.7E-09 2.3E-13 84.4 5.4 75 74-186 29-103 (222)
171 2vm1_A Thioredoxin, thioredoxi 98.8 1.2E-08 4.2E-13 73.4 6.3 73 74-185 27-99 (118)
172 3gnj_A Thioredoxin domain prot 98.8 1.3E-08 4.3E-13 72.6 6.0 75 74-186 21-95 (111)
173 3hz4_A Thioredoxin; NYSGXRC, P 98.7 1.4E-08 4.8E-13 76.4 6.2 74 75-186 24-97 (140)
174 1r26_A Thioredoxin; redox-acti 98.7 2.5E-08 8.7E-13 74.0 6.8 72 74-185 36-108 (125)
175 3uvt_A Thioredoxin domain-cont 98.7 1.3E-08 4.4E-13 72.4 4.7 75 74-185 20-96 (111)
176 1oaz_A Thioredoxin 1; immune s 98.7 4.7E-08 1.6E-12 72.3 7.9 75 74-186 20-108 (123)
177 1mek_A Protein disulfide isome 98.7 1.1E-08 3.8E-13 73.4 4.0 70 74-180 23-94 (120)
178 1v98_A Thioredoxin; oxidoreduc 98.7 2.8E-08 9.6E-13 74.4 6.3 75 74-186 49-123 (140)
179 3idv_A Protein disulfide-isome 98.7 2.2E-08 7.5E-13 81.0 6.1 70 74-180 31-102 (241)
180 3aps_A DNAJ homolog subfamily 98.7 7.3E-09 2.5E-13 75.4 2.6 72 75-185 21-93 (122)
181 2yj7_A LPBCA thioredoxin; oxid 98.1 2.5E-09 8.7E-14 75.1 0.0 75 74-186 18-92 (106)
182 1a8l_A Protein disulfide oxido 98.7 8.4E-08 2.9E-12 77.1 8.9 76 75-186 133-211 (226)
183 2dj3_A Protein disulfide-isome 98.6 1.3E-08 4.4E-13 75.2 3.0 42 75-119 25-67 (133)
184 1nho_A Probable thioredoxin; b 98.6 5.7E-08 2E-12 65.9 5.6 39 79-120 4-42 (85)
185 2qsi_A Putative hydrogenase ex 98.6 4.4E-08 1.5E-12 75.0 5.1 74 78-188 35-110 (137)
186 3ed3_A Protein disulfide-isome 98.6 2.6E-08 8.9E-13 84.9 4.2 72 75-182 35-106 (298)
187 1wmj_A Thioredoxin H-type; str 98.6 7E-09 2.4E-13 76.1 -0.1 72 74-185 35-107 (130)
188 1fo5_A Thioredoxin; disulfide 98.5 1.3E-07 4.5E-12 64.1 6.0 40 78-120 4-43 (85)
189 2av4_A Thioredoxin-like protei 98.5 1.2E-07 4E-12 74.3 5.6 71 76-183 41-111 (160)
190 2qgv_A Hydrogenase-1 operon pr 98.5 7.6E-08 2.6E-12 73.9 4.1 74 78-187 36-111 (140)
191 3apq_A DNAJ homolog subfamily 98.5 5.4E-08 1.9E-12 78.1 3.2 74 74-185 113-186 (210)
192 1a0r_P Phosducin, MEKA, PP33; 98.5 7.2E-08 2.5E-12 80.4 4.1 88 75-202 133-223 (245)
193 3idv_A Protein disulfide-isome 98.5 8.5E-07 2.9E-11 71.5 10.1 70 75-181 147-218 (241)
194 3ph9_A Anterior gradient prote 98.4 3E-08 1E-12 76.9 0.6 92 74-202 43-139 (151)
195 2dbc_A PDCL2, unnamed protein 98.4 9.2E-08 3.1E-12 71.8 3.2 69 78-187 32-100 (135)
196 3q6o_A Sulfhydryl oxidase 1; p 98.4 2.4E-07 8E-12 75.9 5.2 42 77-120 31-74 (244)
197 1ilo_A Conserved hypothetical 98.4 6.3E-07 2.2E-11 59.8 6.3 61 80-182 3-63 (77)
198 3t58_A Sulfhydryl oxidase 1; o 98.4 2.7E-07 9.1E-12 84.6 5.7 74 77-184 31-110 (519)
199 1wou_A Thioredoxin -related pr 98.4 2.5E-07 8.4E-12 68.1 3.8 72 74-176 23-101 (123)
200 1sji_A Calsequestrin 2, calseq 98.4 9.5E-07 3.2E-11 76.2 8.1 66 77-179 29-101 (350)
201 2es7_A Q8ZP25_salty, putative 98.3 1.6E-07 5.4E-12 71.8 2.6 71 79-186 37-110 (142)
202 2hls_A Protein disulfide oxido 98.3 2E-06 7E-11 70.9 8.5 68 74-180 137-207 (243)
203 3h79_A Thioredoxin-like protei 98.3 4.8E-07 1.7E-11 66.5 4.2 68 75-179 33-105 (127)
204 3iv4_A Putative oxidoreductase 98.3 3.4E-07 1.2E-11 67.7 3.0 76 77-186 25-100 (112)
205 2trc_P Phosducin, MEKA, PP33; 98.2 4.4E-07 1.5E-11 74.1 3.0 87 75-201 120-209 (217)
206 3ira_A Conserved protein; meth 98.2 8.1E-07 2.8E-11 70.4 4.4 105 66-202 31-141 (173)
207 2r2j_A Thioredoxin domain-cont 98.2 2.4E-06 8.4E-11 74.6 7.8 71 75-182 22-97 (382)
208 2b5e_A Protein disulfide-isome 98.2 6.5E-07 2.2E-11 80.7 3.8 68 75-179 31-98 (504)
209 3evi_A Phosducin-like protein 98.2 1.1E-06 3.9E-11 65.0 4.2 84 78-202 25-111 (118)
210 2djj_A PDI, protein disulfide- 98.2 1E-06 3.4E-11 63.7 3.3 44 74-120 24-71 (121)
211 3f8u_A Protein disulfide-isome 98.1 3.3E-06 1.1E-10 75.4 7.1 72 77-185 22-93 (481)
212 3apo_A DNAJ homolog subfamily 98.1 4.9E-06 1.7E-10 78.8 6.7 75 69-183 450-524 (780)
213 3kp8_A Vkorc1/thioredoxin doma 98.0 1.3E-07 4.5E-12 68.6 -3.8 39 65-106 3-41 (106)
214 3f8u_A Protein disulfide-isome 98.0 1.4E-06 4.6E-11 78.0 1.9 42 75-119 370-412 (481)
215 3apo_A DNAJ homolog subfamily 98.0 1.8E-06 6E-11 81.9 1.9 72 77-185 676-747 (780)
216 1eej_A Thiol:disulfide interch 97.8 7E-06 2.4E-10 66.4 2.2 39 74-119 85-123 (216)
217 3gyk_A 27KDA outer membrane pr 97.8 8.5E-06 2.9E-10 62.9 2.0 40 66-108 14-53 (175)
218 3dml_A Putative uncharacterize 97.7 1.6E-05 5.3E-10 59.0 2.7 75 78-186 20-95 (116)
219 3qcp_A QSOX from trypanosoma b 97.7 1.3E-05 4.5E-10 72.6 2.3 42 78-121 44-92 (470)
220 2ywm_A Glutaredoxin-like prote 97.7 2.8E-05 9.7E-10 62.4 4.1 42 75-120 135-176 (229)
221 2znm_A Thiol:disulfide interch 97.5 7E-05 2.4E-09 58.7 4.2 41 75-119 22-62 (195)
222 3hd5_A Thiol:disulfide interch 97.4 4.6E-05 1.6E-09 59.9 2.4 43 74-120 24-66 (195)
223 3uem_A Protein disulfide-isome 97.4 2.5E-05 8.7E-10 67.0 0.6 34 74-109 266-299 (361)
224 2e7p_A Glutaredoxin; thioredox 97.4 2.4E-05 8.2E-10 56.2 -0.1 29 71-102 15-43 (116)
225 2b5e_A Protein disulfide-isome 97.3 6.6E-05 2.3E-09 67.5 2.2 33 74-108 375-407 (504)
226 3ga4_A Dolichyl-diphosphooligo 97.2 0.0002 6.9E-09 56.8 3.3 54 77-135 38-102 (178)
227 3us3_A Calsequestrin-1; calciu 97.2 0.0003 1E-08 61.1 4.7 53 77-134 31-89 (367)
228 3h93_A Thiol:disulfide interch 97.1 0.00019 6.4E-09 56.2 2.7 41 74-118 24-64 (192)
229 1h75_A Glutaredoxin-like prote 97.0 0.00068 2.3E-08 45.3 4.1 46 80-134 3-48 (81)
230 1a8l_A Protein disulfide oxido 96.9 0.00075 2.6E-08 53.6 4.6 55 76-135 22-77 (226)
231 2dlx_A UBX domain-containing p 96.9 0.0033 1.1E-07 48.3 7.8 19 74-93 41-59 (153)
232 2k8s_A Thioredoxin; dimer, str 96.9 0.00024 8.3E-09 47.9 1.1 36 80-120 4-39 (80)
233 1ego_A Glutaredoxin; electron 96.9 0.00026 8.8E-09 47.7 1.1 37 80-120 3-39 (85)
234 1t3b_A Thiol:disulfide interch 96.8 0.0003 1E-08 56.5 1.3 35 77-117 87-121 (211)
235 1z6m_A Conserved hypothetical 96.8 0.0019 6.4E-08 49.6 5.8 50 66-119 19-69 (175)
236 1wjk_A C330018D20RIK protein; 96.6 0.00031 1.1E-08 49.9 0.0 36 78-120 17-52 (100)
237 1r7h_A NRDH-redoxin; thioredox 96.6 0.0019 6.4E-08 42.2 3.9 33 80-121 3-35 (75)
238 2fgx_A Putative thioredoxin; N 96.6 0.00089 3E-08 48.7 2.3 37 79-120 31-67 (107)
239 2rem_A Disulfide oxidoreductas 96.5 0.00078 2.7E-08 52.4 1.5 41 74-118 24-64 (193)
240 2ywm_A Glutaredoxin-like prote 96.5 0.0014 4.6E-08 52.4 2.9 55 76-135 21-80 (229)
241 1v58_A Thiol:disulfide interch 96.3 0.0028 9.6E-08 51.8 4.0 37 77-118 98-134 (241)
242 1hyu_A AHPF, alkyl hydroperoxi 96.1 0.004 1.4E-07 56.4 4.1 52 77-135 118-169 (521)
243 2klx_A Glutaredoxin; thioredox 96.1 0.011 3.7E-07 40.2 5.4 52 81-143 9-61 (89)
244 1ttz_A Conserved hypothetical 95.7 0.0082 2.8E-07 41.6 3.4 20 80-100 3-22 (87)
245 2djk_A PDI, protein disulfide- 95.5 0.0013 4.5E-08 48.6 -1.4 40 77-120 24-63 (133)
246 2lqo_A Putative glutaredoxin R 95.2 0.026 8.9E-07 39.5 4.7 40 82-130 8-47 (92)
247 1kte_A Thioltransferase; redox 95.1 0.0029 1E-07 44.3 -0.4 20 81-101 15-34 (105)
248 3uem_A Protein disulfide-isome 95.0 0.018 6.1E-07 49.1 4.0 55 77-135 136-190 (361)
249 2c0g_A ERP29 homolog, windbeut 94.9 0.021 7.1E-07 47.3 4.0 52 77-134 34-91 (248)
250 2khp_A Glutaredoxin; thioredox 94.9 0.037 1.3E-06 37.6 4.8 53 81-143 9-62 (92)
251 1fov_A Glutaredoxin 3, GRX3; a 94.7 0.035 1.2E-06 36.5 4.0 53 81-143 4-57 (82)
252 2qc7_A ERP31, ERP28, endoplasm 94.6 0.012 4.1E-07 48.5 1.9 38 77-120 23-63 (240)
253 3rhb_A ATGRXC5, glutaredoxin-C 94.6 0.028 9.6E-07 40.0 3.6 51 82-142 23-78 (113)
254 3qmx_A Glutaredoxin A, glutare 94.5 0.028 9.7E-07 39.5 3.3 50 82-141 20-71 (99)
255 3kp9_A Vkorc1/thioredoxin doma 94.5 0.0022 7.4E-08 54.6 -3.1 37 65-104 188-224 (291)
256 2cq9_A GLRX2 protein, glutared 94.4 0.043 1.5E-06 40.4 4.4 50 83-142 32-85 (130)
257 1wik_A Thioredoxin-like protei 94.3 0.11 3.9E-06 36.7 6.3 61 71-142 10-75 (109)
258 2ht9_A Glutaredoxin-2; thiored 93.7 0.047 1.6E-06 41.3 3.4 50 83-142 54-107 (146)
259 3ic4_A Glutaredoxin (GRX-1); s 93.7 0.036 1.2E-06 37.6 2.5 31 81-120 15-45 (92)
260 2yan_A Glutaredoxin-3; oxidore 93.4 0.077 2.6E-06 37.2 3.9 47 86-142 30-77 (105)
261 3c1r_A Glutaredoxin-1; oxidize 93.3 0.067 2.3E-06 38.7 3.6 31 82-120 29-62 (118)
262 3nzn_A Glutaredoxin; structura 93.1 0.089 3.1E-06 36.8 3.9 31 81-120 25-55 (103)
263 3h8q_A Thioredoxin reductase 3 92.5 0.14 4.7E-06 36.6 4.2 55 76-142 17-75 (114)
264 2hze_A Glutaredoxin-1; thiored 92.1 0.047 1.6E-06 39.0 1.3 19 81-100 22-40 (114)
265 3hz8_A Thiol:disulfide interch 92.0 0.036 1.2E-06 43.4 0.6 41 75-119 24-64 (193)
266 3msz_A Glutaredoxin 1; alpha-b 91.3 0.28 9.4E-06 32.5 4.4 33 80-121 6-38 (89)
267 2ct6_A SH3 domain-binding glut 91.0 0.55 1.9E-05 33.4 6.0 47 82-131 12-59 (111)
268 1un2_A DSBA, thiol-disulfide i 91.0 0.02 7E-07 45.4 -1.9 43 74-120 112-157 (197)
269 3zyw_A Glutaredoxin-3; metal b 90.0 0.21 7.3E-06 35.7 3.1 61 70-142 10-76 (111)
270 1aba_A Glutaredoxin; electron 89.9 0.53 1.8E-05 31.5 5.0 44 82-134 4-57 (87)
271 3ctg_A Glutaredoxin-2; reduced 89.6 0.35 1.2E-05 35.5 4.1 53 81-142 40-99 (129)
272 2hls_A Protein disulfide oxido 89.5 0.19 6.6E-06 40.7 2.8 58 76-140 26-89 (243)
273 2wci_A Glutaredoxin-4; redox-a 89.4 0.29 1E-05 36.5 3.5 47 86-142 48-95 (135)
274 1t1v_A SH3BGRL3, SH3 domain-bi 86.3 2 6.9E-05 29.0 6.1 49 82-133 6-55 (93)
275 3feu_A Putative lipoprotein; a 83.8 0.41 1.4E-05 37.1 1.6 39 75-119 22-60 (185)
276 3l78_A Regulatory protein SPX; 83.1 1 3.5E-05 32.6 3.5 65 80-155 2-70 (120)
277 3q6o_A Sulfhydryl oxidase 1; p 82.4 3.5 0.00012 32.6 6.8 38 137-185 186-224 (244)
278 1z3e_A Regulatory protein SPX; 81.1 1.1 3.7E-05 32.9 3.0 65 80-155 3-71 (132)
279 3ipz_A Monothiol glutaredoxin- 79.8 1.8 6.1E-05 30.4 3.8 60 71-141 13-77 (109)
280 3fz4_A Putative arsenate reduc 79.7 1.6 5.4E-05 31.7 3.5 65 80-155 5-73 (120)
281 3l9v_A Putative thiol-disulfid 79.6 0.4 1.4E-05 37.1 0.2 43 74-120 13-58 (189)
282 3gkx_A Putative ARSC family re 78.0 1.5 5E-05 31.8 2.8 65 80-155 6-74 (120)
283 2wem_A Glutaredoxin-related pr 77.4 2.1 7.1E-05 30.9 3.5 63 69-142 13-81 (118)
284 2wm8_A MDP-1, magnesium-depend 76.6 12 0.0004 28.0 7.9 59 96-155 70-136 (187)
285 1u6t_A SH3 domain-binding glut 75.7 7.9 0.00027 28.2 6.3 50 80-132 2-52 (121)
286 1s3c_A Arsenate reductase; ARS 75.3 1.4 4.7E-05 33.0 2.1 65 81-156 5-73 (141)
287 1nm3_A Protein HI0572; hybrid, 75.2 1.2 4.2E-05 35.4 1.9 11 125-135 186-196 (241)
288 3rdw_A Putative arsenate reduc 74.1 1.7 5.8E-05 31.5 2.3 65 81-156 8-77 (121)
289 3l4n_A Monothiol glutaredoxin- 74.0 3.3 0.00011 30.3 3.9 64 71-142 9-75 (127)
290 3ihg_A RDME; flavoenzyme, anth 73.5 21 0.00071 31.6 9.8 96 34-185 419-516 (535)
291 1rw1_A Conserved hypothetical 71.7 1.9 6.6E-05 30.7 2.1 61 81-154 3-67 (114)
292 2dkh_A 3-hydroxybenzoate hydro 71.7 7 0.00024 35.9 6.4 123 35-184 467-622 (639)
293 4f9z_D Endoplasmic reticulum r 70.3 6.9 0.00023 30.7 5.3 41 77-120 132-172 (227)
294 2jvx_A NF-kappa-B essential mo 70.0 2.5 8.4E-05 23.0 1.7 21 87-108 5-25 (28)
295 1pn0_A Phenol 2-monooxygenase; 69.3 12 0.00042 34.5 7.5 121 34-184 478-630 (665)
296 3ghf_A Septum site-determining 67.6 13 0.00043 26.9 5.8 56 71-135 43-98 (120)
297 3gx8_A Monothiol glutaredoxin- 66.3 9.5 0.00033 27.3 4.9 60 73-142 13-79 (121)
298 3e58_A Putative beta-phosphogl 65.5 31 0.0011 25.1 8.0 39 96-135 91-129 (214)
299 4gxt_A A conserved functionall 65.4 15 0.00052 31.7 6.9 39 96-135 223-261 (385)
300 2kok_A Arsenate reductase; bru 64.2 2.7 9.4E-05 30.1 1.6 63 80-155 7-73 (120)
301 3ib6_A Uncharacterized protein 63.8 38 0.0013 25.2 8.3 45 96-141 36-83 (189)
302 3f0i_A Arsenate reductase; str 60.0 4.7 0.00016 29.0 2.2 66 81-156 7-76 (119)
303 3s6j_A Hydrolase, haloacid deh 60.0 42 0.0014 24.9 7.9 39 96-135 93-131 (233)
304 3o9x_A Uncharacterized HTH-typ 59.4 11 0.00037 27.0 4.2 66 73-156 24-98 (133)
305 3ga8_A HTH-type transcriptiona 58.8 5.7 0.0002 26.3 2.3 36 73-108 24-64 (78)
306 4ex6_A ALNB; modified rossman 57.3 35 0.0012 25.6 7.1 39 96-135 106-144 (237)
307 2nyv_A Pgpase, PGP, phosphogly 56.9 48 0.0016 25.0 7.8 39 96-135 85-123 (222)
308 2axo_A Hypothetical protein AT 56.8 26 0.00089 29.0 6.5 24 78-102 44-67 (270)
309 3l9s_A Thiol:disulfide interch 56.6 3.9 0.00013 31.6 1.4 48 68-119 14-64 (191)
310 3kzx_A HAD-superfamily hydrola 56.4 29 0.001 26.0 6.5 39 96-135 105-143 (231)
311 2l4c_A Endoplasmic reticulum r 56.3 7.6 0.00026 28.0 2.8 34 69-106 32-65 (124)
312 2p9j_A Hypothetical protein AQ 55.0 55 0.0019 23.3 8.2 37 98-135 40-76 (162)
313 3umb_A Dehalogenase-like hydro 54.4 60 0.0021 24.1 8.0 39 96-135 101-139 (233)
314 3sd7_A Putative phosphatase; s 54.1 35 0.0012 25.8 6.6 59 96-155 112-182 (240)
315 3mc1_A Predicted phosphatase, 52.6 34 0.0012 25.4 6.3 60 96-156 88-159 (226)
316 3c7m_A Thiol:disulfide interch 52.5 3.7 0.00013 31.0 0.6 39 78-119 19-58 (195)
317 3tdg_A DSBG, putative uncharac 51.1 5.8 0.0002 33.1 1.6 39 75-119 147-185 (273)
318 3i10_A Putative glycerophospho 50.1 18 0.00062 29.8 4.5 58 74-134 217-276 (278)
319 1k1e_A Deoxy-D-mannose-octulos 49.9 74 0.0025 23.4 7.7 36 99-135 40-75 (180)
320 2obb_A Hypothetical protein; s 47.1 44 0.0015 24.7 5.8 46 96-144 26-74 (142)
321 2hoq_A Putative HAD-hydrolase 47.0 71 0.0024 24.1 7.4 39 96-135 96-134 (241)
322 3gv1_A Disulfide interchange p 46.3 4.7 0.00016 30.0 0.3 33 66-101 6-38 (147)
323 1kcq_A Gelsolin, brevin, ADF, 43.4 8.9 0.0003 26.7 1.4 30 170-199 30-59 (104)
324 3t58_A Sulfhydryl oxidase 1; o 43.4 26 0.00089 31.5 4.8 39 137-186 186-225 (519)
325 2ec4_A FAS-associated factor 1 42.6 32 0.0011 26.4 4.6 100 74-202 54-162 (178)
326 3fvv_A Uncharacterized protein 42.1 43 0.0015 25.2 5.4 39 96-135 94-132 (232)
327 4as2_A Phosphorylcholine phosp 41.5 19 0.00065 30.4 3.4 36 96-132 145-180 (327)
328 4dvc_A Thiol:disulfide interch 39.4 6.5 0.00022 29.1 0.1 33 74-108 20-52 (184)
329 2x8g_A Thioredoxin glutathione 38.8 19 0.00064 32.5 3.1 50 83-142 23-76 (598)
330 3mjh_B Early endosome antigen 38.8 14 0.00047 20.9 1.4 20 88-108 8-27 (34)
331 3ktb_A Arsenical resistance op 38.1 69 0.0024 22.7 5.4 39 79-119 7-51 (106)
332 2pr7_A Haloacid dehalogenase/e 37.1 25 0.00086 24.0 3.0 38 96-134 20-57 (137)
333 2wul_A Glutaredoxin related pr 36.6 46 0.0016 23.8 4.4 63 69-142 13-81 (118)
334 3vhs_A ATPase wrnip1; zinc fin 36.6 8.9 0.00031 20.3 0.3 11 87-98 8-18 (29)
335 1nnl_A L-3-phosphoserine phosp 36.2 38 0.0013 25.4 4.1 39 96-135 88-126 (225)
336 1l6r_A Hypothetical protein TA 35.8 68 0.0023 24.8 5.7 38 97-135 25-62 (227)
337 3gn3_A Putative protein-disulf 34.3 12 0.00042 28.6 1.0 38 77-116 15-52 (182)
338 1wr8_A Phosphoglycolate phosph 33.2 1.6E+02 0.0054 22.4 7.6 38 97-135 23-60 (231)
339 2gmw_A D,D-heptose 1,7-bisphos 33.2 1.2E+02 0.0041 22.8 6.6 39 96-135 52-105 (211)
340 2pib_A Phosphorylated carbohyd 32.1 69 0.0024 23.1 4.9 39 96-135 86-124 (216)
341 3j21_Z 50S ribosomal protein L 31.9 1.2E+02 0.0041 20.5 6.6 54 99-155 20-77 (99)
342 3m9l_A Hydrolase, haloacid deh 30.9 73 0.0025 23.3 4.9 39 96-135 72-110 (205)
343 2fpr_A Histidine biosynthesis 30.9 71 0.0024 23.5 4.8 43 96-141 44-101 (176)
344 3bci_A Disulfide bond protein 30.7 15 0.00053 27.4 1.0 39 77-117 12-52 (186)
345 3noy_A 4-hydroxy-3-methylbut-2 29.6 1.4E+02 0.0047 25.9 6.8 51 96-149 45-98 (366)
346 3um9_A Haloacid dehalogenase, 29.3 90 0.0031 22.9 5.3 39 96-135 98-136 (230)
347 1svq_A Severin; actin-binding; 29.0 11 0.00038 26.8 -0.1 30 170-199 40-69 (114)
348 2xry_A Deoxyribodipyrimidine p 28.8 1.6E+02 0.0056 25.7 7.5 38 97-135 92-129 (482)
349 2no4_A (S)-2-haloacid dehaloge 28.4 92 0.0032 23.4 5.2 39 96-135 107-145 (240)
350 1g2o_A Purine nucleoside phosp 28.3 99 0.0034 25.2 5.6 62 46-118 58-119 (268)
351 3n1u_A Hydrolase, HAD superfam 28.1 31 0.001 26.1 2.3 32 103-135 55-86 (191)
352 1w41_A 50S ribosomal protein L 27.9 1.4E+02 0.0049 20.1 6.4 54 99-155 21-78 (101)
353 2xsa_A Ogoga, hyaluronoglucosa 27.2 1.1E+02 0.0037 27.2 5.9 48 96-144 57-116 (447)
354 1zrn_A L-2-haloacid dehalogena 27.1 1E+02 0.0035 22.8 5.2 39 96-135 97-135 (232)
355 2hsz_A Novel predicted phospha 26.6 87 0.003 23.9 4.8 39 96-135 116-154 (243)
356 3m1y_A Phosphoserine phosphata 26.0 53 0.0018 24.2 3.3 39 96-135 77-115 (217)
357 3a1c_A Probable copper-exporti 25.9 92 0.0031 24.8 5.0 59 96-155 165-224 (287)
358 1sji_A Calsequestrin 2, calseq 25.5 56 0.0019 27.0 3.7 24 83-107 252-275 (350)
359 3kd3_A Phosphoserine phosphohy 25.0 79 0.0027 22.9 4.2 39 96-135 84-122 (219)
360 3mmz_A Putative HAD family hyd 24.2 94 0.0032 22.8 4.4 33 102-135 47-79 (176)
361 3umv_A Deoxyribodipyrimidine p 24.2 2E+02 0.0068 25.7 7.2 37 97-135 95-131 (506)
362 3pgv_A Haloacid dehalogenase-l 24.1 2.2E+02 0.0075 22.2 7.0 56 78-135 23-78 (285)
363 2hdo_A Phosphoglycolate phosph 24.0 1.3E+02 0.0045 21.8 5.3 37 97-135 86-122 (209)
364 3ir9_A Peptide chain release f 23.6 77 0.0026 24.0 3.8 44 87-133 105-154 (166)
365 2r47_A Uncharacterized protein 23.5 76 0.0026 24.1 3.7 63 76-144 84-146 (157)
366 4g9p_A 4-hydroxy-3-methylbut-2 23.1 2.3E+02 0.008 24.7 7.2 54 87-146 31-90 (406)
367 3kbb_A Phosphorylated carbohyd 22.7 1.2E+02 0.0042 22.2 4.9 39 96-135 86-124 (216)
368 3qle_A TIM50P; chaperone, mito 22.7 33 0.0011 27.0 1.6 36 168-203 33-71 (204)
369 2zos_A MPGP, mannosyl-3-phosph 22.3 1.7E+02 0.0057 22.6 5.8 38 97-135 20-57 (249)
370 3qxg_A Inorganic pyrophosphata 22.2 1.3E+02 0.0045 22.5 5.1 38 96-135 111-148 (243)
371 1xvi_A MPGP, YEDP, putative ma 22.1 2.8E+02 0.0097 21.6 7.3 36 99-135 31-66 (275)
372 2jad_A Yellow fluorescent prot 22.1 23 0.00078 30.7 0.5 8 128-135 281-288 (362)
373 4eek_A Beta-phosphoglucomutase 21.8 1.2E+02 0.0042 23.0 4.8 39 96-135 112-150 (259)
374 3skx_A Copper-exporting P-type 21.2 1.3E+02 0.0046 22.9 5.0 39 96-135 146-184 (280)
375 2o2x_A Hypothetical protein; s 21.2 95 0.0032 23.4 4.0 39 96-135 58-111 (218)
376 4eze_A Haloacid dehalogenase-l 21.1 92 0.0032 25.6 4.2 39 96-135 181-219 (317)
377 3pct_A Class C acid phosphatas 21.0 77 0.0026 25.8 3.5 39 96-135 103-145 (260)
378 3us3_A Calsequestrin-1; calciu 20.9 49 0.0017 27.8 2.4 39 78-119 250-289 (367)
379 2gjf_A Designed protein; proca 20.2 1.5E+02 0.0052 18.8 4.3 27 115-143 51-77 (78)
No 1
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.1e-38 Score=257.40 Aligned_cols=162 Identities=38% Similarity=0.651 Sum_probs=143.7
Q ss_pred ccccccccCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCc-cchhhHHHhHHH
Q 028808 29 SRAYASVAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSN-QHVPSYKNNIDK 105 (203)
Q Consensus 29 ~~~~~~~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~-ehl~~l~~~~~~ 105 (203)
...++++++|++ ||+|++++. +| .++++|+++++||++||+|||++|||+|+. | +|.|++++++
T Consensus 20 ~~~~~~l~vG~~----aPdf~l~~~~~~G--------~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e-~p~l~~~~~~ 86 (184)
T 3uma_A 20 FQSMMTIAVGDK----LPNATFKEKTADG--------PVEVTTELLFKGKRVVLFAVPGAFTPTCSLNH-LPGYLENRDA 86 (184)
T ss_dssp CCCSSCCCTTCB----CCCCEEEEEETTE--------EEEEEHHHHHTTSEEEEEEESCTTCHHHHHTH-HHHHHHTHHH
T ss_pred ccccCcCCCCCC----CCCcEeecccCCC--------ceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHH-HHHHHHHHHH
Confidence 334567999999 699999987 42 178999995599999999999999999999 8 9999999999
Q ss_pred HHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 106 FKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 106 f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
|+++|++.|++||.|+++.+++|+++++++.+||+++|++++++++||+..+....|++.++.|++||||||+|++++++
T Consensus 87 ~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~ 166 (184)
T 3uma_A 87 ILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIE 166 (184)
T ss_dssp HHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEEC
T ss_pred HHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEe
Confidence 99999965999999999999999999999434999999999999999998765444555567899999999999999999
Q ss_pred cCCCCcccCCHHHHHhcC
Q 028808 186 EAPSKMKVSGGDVILGQI 203 (203)
Q Consensus 186 ~~~~~~~~~~a~~vL~~l 203 (203)
+++++++.++++++|++|
T Consensus 167 ~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 167 ESPGQATASGAAAMLELL 184 (184)
T ss_dssp SSTTCCSTTSHHHHHHHC
T ss_pred CCCCCCcCCCHHHHHhhC
Confidence 999989999999999987
No 2
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=100.00 E-value=2.2e-38 Score=253.29 Aligned_cols=158 Identities=34% Similarity=0.546 Sum_probs=138.9
Q ss_pred cccccccCCCccccCCCceEEe-ccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCC-ccchhhHHHhHHHHH
Q 028808 30 RAYASVAVGSDIVSAAQDVSLQ-KARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCS-NQHVPSYKNNIDKFK 107 (203)
Q Consensus 30 ~~~~~~~~G~~~~~~APdf~l~-~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~-~ehl~~l~~~~~~f~ 107 (203)
....++++|++ ||+|+|+ +.+| ++++|+++++||++||+|||++|||+|+ +| +|.|++++++|+
T Consensus 10 ~~~~~~~vG~~----aPdf~l~~~~~g---------~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e-~p~l~~~~~~~~ 75 (173)
T 3mng_A 10 HGSAPIKVGDA----IPAVEVFEGEPG---------NKVNLAELFKGKKGVLFGVPGAFTPGCSKTH-LPGFVEQAEALK 75 (173)
T ss_dssp ---CCCCTTCB----CCCCEEECSSTT---------CEEEHHHHTTTSEEEEEECSCTTCHHHHHTH-HHHHHHTHHHHH
T ss_pred CCCCCCCCCCC----CCCeEeeeCCCC---------CEEEhHHHhCCCcEEEEEEeCCCCCCCCHHH-HHHHHHHHHHHH
Confidence 44578999999 6999999 7765 8999999669999999999999999999 58 999999999999
Q ss_pred HcCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccc---cccCCCCcceEEEEEeCCEEEEEE
Q 028808 108 AKGIDSVIC-VAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLS---AALLGPRSERWSAYVEDGRIKALN 183 (203)
Q Consensus 108 ~~gv~~vi~-IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~---~~g~~~~~~r~tfIIddG~I~~~~ 183 (203)
++|++ ||+ ||.|+++.+++|+++++++.+||+++|++++++++||+..+.. ..| +.++.|++||||||+|++++
T Consensus 76 ~~gv~-vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g-~~~~~r~tfvIDdG~I~~~~ 153 (173)
T 3mng_A 76 AKGVQ-VVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFG-NRRLKRFSMVVQDGIVKALN 153 (173)
T ss_dssp TTTCC-EEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHS-SCCBCCEEEEEETTEEEEEE
T ss_pred hCCCE-EEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccC-CcceEEEEEEEECCEEEEEE
Confidence 99999 997 9999999999999999984349999999999999999986421 112 23578999999999999999
Q ss_pred eecCCCCcccCCHHHHHhcC
Q 028808 184 VEEAPSKMKVSGGDVILGQI 203 (203)
Q Consensus 184 ~~~~~~~~~~~~a~~vL~~l 203 (203)
+++++.+.+++++++||++|
T Consensus 154 v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 154 VEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp ECTTSSCSSTTSHHHHHHHC
T ss_pred EeCCCCCcchHHHHHHHHhC
Confidence 99998888999999999987
No 3
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=100.00 E-value=5.7e-38 Score=251.02 Aligned_cols=158 Identities=28% Similarity=0.529 Sum_probs=136.6
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
.++++|++ ||+|+|++. | .+++++|+++++||++||+|||++|||+|+.| ++.|++.+++|+++|++
T Consensus 12 ~~~~vGd~----aPdf~l~~~-g-------~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e-~~~f~~~~~ef~~~gv~ 78 (171)
T 2xhf_A 12 SPIKVGDI----IPDVLVYED-V-------PSKSFPIHDVFRGRKGILFSVVGAFVPGSNNH-IPEYLSLYDKFKEEGYH 78 (171)
T ss_dssp CCCCTTCB----CCCCEEECS-S-------TTCEEETHHHHTTSEEEEEECSCTTCTTTTSS-HHHHHHTHHHHHHTTCC
T ss_pred CcccCcCC----CCCeEEecC-C-------CCcEEEhHHHhCCCeEEEEEECCCCCCcCHHH-HHHHHHHHHHHHHCCCC
Confidence 57999999 699999842 2 12689999966999999999999999999999 99999999999999994
Q ss_pred EEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeecCCCCcc
Q 028808 113 SVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPSKMK 192 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~~~~~ 192 (203)
.|+|||+|+++++++|++++++..+||+|||++++++++||+..+....|++.++.|++||||||+|+++++++++++++
T Consensus 79 ~VigIS~D~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~~~~~~~~ 158 (171)
T 2xhf_A 79 TIACIAVNDPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLIDDNKIRSVSTEPDITGLA 158 (171)
T ss_dssp EEEEEESSCHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEETTEEEEEEETTSCSHHH
T ss_pred EEEEEeCCCHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEeCCEEEEEEEeCCCCccc
Confidence 49999999999999999999982239999999999999999987543334455689999999999999999999887778
Q ss_pred cCCHHHHHhcC
Q 028808 193 VSGGDVILGQI 203 (203)
Q Consensus 193 ~~~a~~vL~~l 203 (203)
+++|++||++|
T Consensus 159 ~s~a~~vL~~~ 169 (171)
T 2xhf_A 159 CLLSIQRQKEN 169 (171)
T ss_dssp HHHHHHHC---
T ss_pred CCCHHHHHHHh
Confidence 99999999875
No 4
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=1.2e-37 Score=250.15 Aligned_cols=164 Identities=34% Similarity=0.616 Sum_probs=141.7
Q ss_pred ccccCCCccccCCCceEEeccccccCCCC-CCceeeecccccCCCeEEEEEeeCCCCCCCCc-cchhhHHHhHHHHHHcC
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVS-SNFATTPIKDIFKGKKVVIFGLPGAYTGVCSN-QHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~-~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~-ehl~~l~~~~~~f~~~g 110 (203)
.++++||++ |++++....+++.+.. +..++++|+++++||++||+|||++|||+|+. | +|.|++.+++|+++|
T Consensus 8 ~~~~~~~~~----p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~E-l~~f~~~~~ef~~~g 82 (176)
T 4f82_A 8 HMIQVGDAL----PDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQH-VPGYVEHAEQLRAAG 82 (176)
T ss_dssp CCCCTTCBC----CCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTH-HHHHHHHHHHHHHTT
T ss_pred hhhhcCCcC----CceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHH-HHHHHHHHHHHHhCC
Confidence 368999995 9999987643110001 24589999996699999999999999999999 8 999999999999999
Q ss_pred C-cEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeecCCC
Q 028808 111 I-DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPS 189 (203)
Q Consensus 111 v-~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~~ 189 (203)
+ + |++||+|+++.+++|+++++++.+||+++|++++++++||+..+....|++.++.|++|||+||+|+++++++ ++
T Consensus 83 ~d~-VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~-~~ 160 (176)
T 4f82_A 83 IDE-IWCVSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA-PG 160 (176)
T ss_dssp CCE-EEEEESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC-TT
T ss_pred CCE-EEEEeCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC-CC
Confidence 9 7 9999999999999999999984359999999999999999987654456666678999999999999999987 56
Q ss_pred CcccCCHHHHHhcC
Q 028808 190 KMKVSGGDVILGQI 203 (203)
Q Consensus 190 ~~~~~~a~~vL~~l 203 (203)
+++.++|+++|++|
T Consensus 161 ~~~~~~a~~vL~~L 174 (176)
T 4f82_A 161 KFEVSDAASVLATL 174 (176)
T ss_dssp CCSSSSHHHHHHTC
T ss_pred CcchhhHHHHHHHh
Confidence 78899999999986
No 5
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=100.00 E-value=4.3e-37 Score=244.31 Aligned_cols=159 Identities=79% Similarity=1.292 Sum_probs=133.0
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHH
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYV 124 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~ 124 (203)
||+|++++.+.+.+|.++++++++|+++++||++||+|||++|||+|+.||+|.|++++++|+++|++.|++||.|+++.
T Consensus 13 aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~ 92 (171)
T 2pwj_A 13 ASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYT 92 (171)
T ss_dssp SSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHH
T ss_pred CCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHH
Confidence 79999998730001211233789999955998899999999999999998899999999999999996599999999999
Q ss_pred HHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeecCCCCcccCCHHHHHhcC
Q 028808 125 MNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPSKMKVSGGDVILGQI 203 (203)
Q Consensus 125 ~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~~~~~~~~a~~vL~~l 203 (203)
+++|+++++++.+||+++|++++++++||+.......|+|.++.|++||||||+|++++++.++++.+++++++||++|
T Consensus 93 ~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~~~~~~~~~~~~~il~~l 171 (171)
T 2pwj_A 93 VNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVVDGKVKALNVEESPSDVKVSGAETILGQI 171 (171)
T ss_dssp HHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEETTEEEEEEECSSTTCCSSSSHHHHHHHC
T ss_pred HHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEECCEEEEEEeecCCCCCcccCHHHHHhcC
Confidence 9999999996214999999999999999998643323344445788899999999999999999888899999999986
No 6
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=1.4e-36 Score=237.62 Aligned_cols=148 Identities=21% Similarity=0.355 Sum_probs=120.4
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
++++|++ ||+|+|++.+| ++++|++ ++||++||+|||++|||+|+.| +|.|++++++|+++|+.
T Consensus 3 ~l~vG~~----aPdF~l~~~~G---------~~~~l~d-~~Gk~vvl~f~~~~~c~~C~~e-~~~l~~~~~~~~~~~~~- 66 (157)
T 4g2e_A 3 MVEIGEL----APDFELPDTEL---------KKVKLSA-LKGKVVVLAFYPAAFTQVCTKE-MCTFRDSMAKFNQVNAV- 66 (157)
T ss_dssp CCCTTSB----CCCCEEEBTTS---------CEEEGGG-GTTSCEEEEECSCTTCCC-------CCSCGGGGGGGCSSE-
T ss_pred cCCCCCC----CcCeEeECCCC---------CEEeHHH-HCCCeEEEEecCCCCCCccccc-hhhcccccccccccCce-
Confidence 5899999 79999999886 8999999 5999888887789999999999 99999999999999998
Q ss_pred EEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCcc
Q 028808 114 VICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKMK 192 (203)
Q Consensus 114 vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~~ 192 (203)
+++||.|+++.+++|+++++++ ||+++|++++++++||+............+.|++|||| +|+|+++++++++.+
T Consensus 67 ~v~vs~d~~~~~~~~~~~~~~~--~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~-- 142 (157)
T 4g2e_A 67 VLGISVDPPFSNKAFKEHNKLN--FTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTK-- 142 (157)
T ss_dssp EEEEESSCHHHHHHHHHHTTCC--SEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTC--
T ss_pred EeeecccchhHHHHHHHHcCCc--EEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCC--
Confidence 9999999999999999999996 99999999999999999764321111123579999999 999999999987542
Q ss_pred cCCHHHHHh
Q 028808 193 VSGGDVILG 201 (203)
Q Consensus 193 ~~~a~~vL~ 201 (203)
..+.+++++
T Consensus 143 ~~~~~eil~ 151 (157)
T 4g2e_A 143 EPPYDEIEK 151 (157)
T ss_dssp CCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 344555544
No 7
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=4.1e-37 Score=242.91 Aligned_cols=149 Identities=16% Similarity=0.367 Sum_probs=130.5
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeeccccc-CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIF-KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~-~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
++++|++ ||+|+|++.+| ++++|+++. +||++||+|||++|||+|+.| +|.|++++++|+++|+.
T Consensus 4 ml~vG~~----aPdF~l~~~~G---------~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e-~~~l~~~~~~~~~~~v~ 69 (164)
T 4gqc_A 4 LVELGEK----APDFTLPNQDF---------EPVNLYEVLKRGRPAVLIFFPAAFSPVCTKE-LCTFRDKMAQLEKANAE 69 (164)
T ss_dssp CCCTTSB----CCCCEEEBTTS---------CEEEHHHHHHTSSCEEEEECSCTTCCEECSS-CEESCCCGGGGGGSSSE
T ss_pred cccCCCC----CcCcEeECCCC---------CEEEHHHHhcCCCEEEEEEeCCCCCCCcccc-hhhhhhhHHHhhccCce
Confidence 5899999 79999999886 899999953 799999999999999999999 99999999999999998
Q ss_pred EEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCc
Q 028808 113 SVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKM 191 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~ 191 (203)
+++||.|+++.+++|+++++++ ||+++|++++++++||+..... .+....+.|++|||| +|+|+|+++++++.
T Consensus 70 -vv~is~d~~~~~~~~~~~~~~~--fp~l~D~~~~v~~~ygv~~~~~-~~~~~~~~p~tflID~~G~I~~~~~~~~~~-- 143 (164)
T 4gqc_A 70 -VLAISVDSPWCLKKFKDENRLA--FNLLSDYNREVIKLYNVYHEDL-KGLKMVAKRAVFIVKPDGTVAYKWVTDNPL-- 143 (164)
T ss_dssp -EEEEESSCHHHHHHHHHHTTCC--SEEEECTTSHHHHHTTCEEEEE-TTEEEEECCEEEEECTTSBEEEEEECSCTT--
T ss_pred -EEEecCCCHHHHHHHHHhcCcc--cceeecCchHHHHHcCCccccc-ccCcCCeeeEEEEECCCCEEEEEEEeCCCC--
Confidence 9999999999999999999997 9999999999999999976422 122223579999999 99999999988763
Q ss_pred ccCCHHHHHhc
Q 028808 192 KVSGGDVILGQ 202 (203)
Q Consensus 192 ~~~~a~~vL~~ 202 (203)
+..+.+++|+.
T Consensus 144 ~~~~~~eil~~ 154 (164)
T 4gqc_A 144 NEPDYDEVVRE 154 (164)
T ss_dssp CCCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 46678888765
No 8
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=100.00 E-value=5.7e-36 Score=241.53 Aligned_cols=162 Identities=25% Similarity=0.484 Sum_probs=135.7
Q ss_pred ccCCCccccCCCceEEec--cc-----cccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCC-ccchhhHHHhHHHH
Q 028808 35 VAVGSDIVSAAQDVSLQK--AR-----TWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCS-NQHVPSYKNNIDKF 106 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~--~~-----g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~-~ehl~~l~~~~~~f 106 (203)
+++|++ ||+|+|++ .+ +..+| ...++.++|+++++||++||+|||++|||+|+ .| ++.|++.+++|
T Consensus 1 l~vGd~----aPdf~l~~~~~~~~~~~~~~~G-~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e-~~~f~~~~~~f 74 (182)
T 1xiy_A 1 MKENDL----IPNVKVMIDVRNMNNISDTDGS-PNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKM-IPGYEEEYDYF 74 (182)
T ss_dssp CCTTCB----CCCCEEEEEHHHHTC---------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTH-HHHHHHTHHHH
T ss_pred CCCCCC----CCCeEEEcccccccccccccCC-CccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHH
Confidence 468999 69999998 30 00001 01236899999779999999999999999999 88 99999999999
Q ss_pred -HHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 107 -KAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 107 -~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
+++|++.|++||+|++++|++|++++++. +||+|||++++++++||+..+....|++.++.|++||||||+|+++++.
T Consensus 75 ~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~-~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~ 153 (182)
T 1xiy_A 75 IKENNFDDIYCITNNDIYVLKSWFKSMDIK-KIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVENNILVKMFQE 153 (182)
T ss_dssp HTTSCCSEEEEEESSCHHHHHHHHHHTTCC-SSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEETTEEEEEEEC
T ss_pred HHhCCCcEEEEEeCCCHHHHHHHHHHcCCC-CceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEcCCEEEEEEEe
Confidence 99999449999999999999999999994 4999999999999999998765445666668999999999999999998
Q ss_pred cCCCC------cccCCHHHHHhcC
Q 028808 186 EAPSK------MKVSGGDVILGQI 203 (203)
Q Consensus 186 ~~~~~------~~~~~a~~vL~~l 203 (203)
+++++ ++.+++++||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~vL~~L 177 (182)
T 1xiy_A 154 KDKQHNIQTDPYDISTVNNVKEFL 177 (182)
T ss_dssp SSCCTTCSSCCCSTTSHHHHHHHH
T ss_pred CCcccccccCcccCCCHHHHHHHH
Confidence 76542 5679999999875
No 9
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=100.00 E-value=1.5e-35 Score=234.88 Aligned_cols=155 Identities=32% Similarity=0.559 Sum_probs=135.2
Q ss_pred ccccCCCccccCCCceEEe-ccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCc-cchhhHHHhHHHHHHcC
Q 028808 33 ASVAVGSDIVSAAQDVSLQ-KARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSN-QHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~-~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~-ehl~~l~~~~~~f~~~g 110 (203)
|++++|++ ||+|+++ +.+| ++++|+++++||++||+|||++|||+|+. | +|.|++++++|+++|
T Consensus 1 m~l~~G~~----aP~f~l~~~~~G---------~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e-~p~l~~~~~~~~~~g 66 (167)
T 2wfc_A 1 MPIKEGDK----LPAVTVFGATPN---------DKVNMAELFAGKKGVLFAVPGAFTPGSSKTH-LPGYVEQAAAIHGKG 66 (167)
T ss_dssp -CCCTTCB----CCCCEEESSSTT---------CEEEHHHHTTTSEEEEEEESCTTCHHHHHTH-HHHHHHTHHHHHHTT
T ss_pred CCCCCCCc----CCCcEeecCCCC---------cEEeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCC
Confidence 45889999 6999999 8775 89999995599999999999999999999 9 999999999999999
Q ss_pred C-cEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcccccc-ccCCCCcceEEEEEeCCEEEEEEeecCC
Q 028808 111 I-DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSA-ALLGPRSERWSAYVEDGRIKALNVEEAP 188 (203)
Q Consensus 111 v-~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~-~g~~~~~~r~tfIIddG~I~~~~~~~~~ 188 (203)
+ + ||+||.|+++.+++|+++++++.+||+++|++++++++||+...... .| ..++.|++|||++|+|+++++++++
T Consensus 67 v~~-vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g-~~~~~p~t~lI~~G~I~~~~~~~~~ 144 (167)
T 2wfc_A 67 VDI-IACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDLSAVLG-NVRSKRYSLVIEDGVVTKVNVEPDG 144 (167)
T ss_dssp CCE-EEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCHHHHS-SCEECCEEEEEETTEEEEEEECTTS
T ss_pred CCE-EEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcCCccccccccC-cccceEEEEEEeCCEEEEEEecCCC
Confidence 9 8 99999999999999999999842499999999999999999754211 12 1235699999999999999999988
Q ss_pred CCcccCCHHHHHhcC
Q 028808 189 SKMKVSGGDVILGQI 203 (203)
Q Consensus 189 ~~~~~~~a~~vL~~l 203 (203)
...+.+.|+.+|++|
T Consensus 145 ~~~~~~~~~~~~~~~ 159 (167)
T 2wfc_A 145 KGLTCSLAPNILSQL 159 (167)
T ss_dssp SSSSTTSHHHHHHHH
T ss_pred CcceeccHHHHHHHh
Confidence 778999999999875
No 10
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=100.00 E-value=9.3e-35 Score=227.96 Aligned_cols=157 Identities=34% Similarity=0.674 Sum_probs=132.5
Q ss_pred cccccCCCccccCCCceEEe--ccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCC-ccchhhHHHhHHHHHH
Q 028808 32 YASVAVGSDIVSAAQDVSLQ--KARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCS-NQHVPSYKNNIDKFKA 108 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~--~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~-~ehl~~l~~~~~~f~~ 108 (203)
+|++++|++ ||+|+++ +.+| ..++++|+++++||++||+|||++|||+|+ .| +|.|++++++|++
T Consensus 1 mm~~~~G~~----aP~f~l~~~~~~G-------~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e-~~~l~~~~~~~~~ 68 (162)
T 1tp9_A 1 MAPIAVGDV----LPDGKLAYFDEQD-------QLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKH-VPGFIEKAGELKS 68 (162)
T ss_dssp CCCCCTTCB----CCCCEEEEECTTS-------CEEEEESHHHHTTSEEEEEEESCTTCHHHHHTH-HHHHHHHHHHHHH
T ss_pred CCcCCCCCC----CCCeEEEeecCCC-------CceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHH
Confidence 357899999 6999986 5442 126899999449998777777799999999 99 9999999999999
Q ss_pred cCCcEEEEEecCCHHHHHHHHHHhCC--CCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 109 KGIDSVICVAVNDPYVMNGWAEKLQA--KDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 109 ~gv~~vi~IS~d~~~~~~~~~~~~~l--~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+|+++|++||.|+++.+++|++++++ + ||+++|++++++++||+.......|++.+..|++||||+|+|+++++++
T Consensus 69 ~~v~~vv~Is~d~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 69 KGVTEILCISVNDPFVMKAWAKSYPENKH--VKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp TTCCCEEEEESSCHHHHHHHHHTCTTCSS--EEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred CCCCEEEEEECCCHHHHHHHHHhcCCCCC--eEEEECCCchHHHHcCcccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 99854999999999999999999999 5 9999999999999999975432234333457999999999999999988
Q ss_pred CCCCcccCCHHHHHhcC
Q 028808 187 APSKMKVSGGDVILGQI 203 (203)
Q Consensus 187 ~~~~~~~~~a~~vL~~l 203 (203)
+++.+.+++++||++|
T Consensus 147 -~~~~~~~~~~~vl~~l 162 (162)
T 1tp9_A 147 -GGEFTVSSAEDILKDL 162 (162)
T ss_dssp -SSCCSSCSHHHHHTTC
T ss_pred -CCCCccCCHHHHHhhC
Confidence 7666677999999987
No 11
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=1.4e-34 Score=239.43 Aligned_cols=148 Identities=18% Similarity=0.318 Sum_probs=126.6
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ ||||+++...+ ++++++++|+| |+|||+||+|||++|||+|+.| ++.|++++++|+++|++
T Consensus 24 ~~~~vG~~----APdF~~~a~l~-----d~~g~~vsLsd-~~GK~vVL~FyP~d~TpvCt~E-~~~f~~~~~eF~~~g~~ 92 (219)
T 3tue_A 24 GNAKINSP----APSFEEVALMP-----NGSFKKISLSS-YKGKWVVLFFYPLDFTFVCPTE-VIAFSDSVSRFNELNCE 92 (219)
T ss_dssp CCCCTTSB----CCCCEEEEECT-----TSCEEEEEGGG-GTTSEEEEEECSCTTCSSCCHH-HHHHHTTHHHHHTTTEE
T ss_pred cccccCCc----CCCCccccccc-----CCCCcEEehHH-hCCCEEEEEEecccCCCCCchh-HhhHHHHHhhhccCCcE
Confidence 45789999 79999765432 12238999999 5999999999999999999999 99999999999999998
Q ss_pred EEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEe
Q 028808 113 SVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
|+|||+|++++|++|++++ +++ ||+++|++++++++||+..+.. | .+.|++|||| +|+|+++++
T Consensus 93 -vigiS~Ds~~sh~~w~~~~~~~~~~~~l~--fpllsD~~~~va~~yGv~~~~~--g---~~~R~tFiIDp~g~Ir~~~~ 164 (219)
T 3tue_A 93 -VLACSIDSEYAHLQWTLQDRKKGGLGTMA--IPILADKTKNIARSYGVLEESQ--G---VAYRGLFIIDPHGMLRQITV 164 (219)
T ss_dssp -EEEEESSCHHHHHHHHHSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEEEE
T ss_pred -EEEeeCCchhhHHHHhhhhHHhcCccccc--cccccCcccHHHHHcCCcccCC--C---eeEEEEEEECCCCeEEEEEE
Confidence 9999999999999999875 354 9999999999999999986432 2 3679999999 999999999
Q ss_pred ecCCCCcccCCHHHHHhc
Q 028808 185 EEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 185 ~~~~~~~~~~~a~~vL~~ 202 (203)
++.+. ..+++++|+.
T Consensus 165 ~~~~~---gr~~~EvLr~ 179 (219)
T 3tue_A 165 NDMPV---GRSVEEVLRL 179 (219)
T ss_dssp ECTTC---CCCHHHHHHH
T ss_pred ecCCC---CCCHHHHHHH
Confidence 87654 3588887765
No 12
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-35 Score=240.76 Aligned_cols=149 Identities=18% Similarity=0.279 Sum_probs=126.3
Q ss_pred ccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC
Q 028808 31 AYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 31 ~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g 110 (203)
..|.+++|++ ||||+++...+ +++++++|+| ++||++||+|||++|||+|+.| ++.|++.+++|+++|
T Consensus 19 ~~M~~~VG~~----APdF~l~a~~d------~~~~~vsLsd-~~GK~vVL~FyP~d~TpvCt~E-~~~f~~~~~~f~~~g 86 (216)
T 3sbc_A 19 SHMVAQVQKQ----APTFKKTAVVD------GVFDEVSLDK-YKGKYVVLAFIPLAFTFVSPTE-IIAFSEAAKKFEEQG 86 (216)
T ss_dssp ---CCCTTSB----CCCCCEEEEET------TEEEEECGGG-GTTSEEEEEECSCTTSSHHHHH-HHHHHHHHHHHHHTT
T ss_pred CcchhhcCCc----CCCCCCcceEC------CCCcEEehHH-hCCCeEEEEEEcCCCCCcCchh-hhHHHHhHHhhccCC
Confidence 3477999999 79999985421 1238999999 5999999999999999999999 999999999999999
Q ss_pred CcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 111 IDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 111 v~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
++ |++||+|++++|++|+++. ++ +||+++|++++++++||+..+.. | .+.|++|||| +|+|+++
T Consensus 87 ~~-vigiS~Ds~~sh~aw~~~~~~~~~~~~l--~fpllsD~~~~vak~YGv~~~~~--g---~~~R~tFiID~~G~Ir~~ 158 (216)
T 3sbc_A 87 AQ-VLFASTDSEYSLLAWTNIPRKEGGLGPI--NIPLLADTNHSLSRDYGVLIEEE--G---VALRGLFIIDPKGVIRHI 158 (216)
T ss_dssp EE-EEEEESSCHHHHHHHHTSCGGGTCCCSC--SSCEEECTTSHHHHHHTCEETTT--T---EECEEEEEECTTSBEEEE
T ss_pred ce-EEEeecCchhhHHHHHHHHHHhCCccCc--ccceEeCCCCHHHHHcCCeeccC--C---ceeeEEEEECCCCeEEEE
Confidence 98 9999999999999999775 35 49999999999999999986432 2 2679999999 9999999
Q ss_pred EeecCCCCcccCCHHHHHhc
Q 028808 183 NVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 183 ~~~~~~~~~~~~~a~~vL~~ 202 (203)
++++.+.+ .+++++|+.
T Consensus 159 ~v~~~~~g---rn~dEiLr~ 175 (216)
T 3sbc_A 159 TINDLPVG---RNVDEALRL 175 (216)
T ss_dssp EEECTTBC---CCHHHHHHH
T ss_pred EEcCCCCC---CCHHHHHHH
Confidence 99986643 577777764
No 13
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.98 E-value=3.8e-32 Score=225.45 Aligned_cols=156 Identities=30% Similarity=0.558 Sum_probs=130.4
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCce--eeecccccCCCeEEEEEeeCCCCCCCC-ccchhhHHHhHHHHHHc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFA--TTPIKDIFKGKKVVIFGLPGAYTGVCS-NQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~--~vsL~dl~~gk~vVL~~f~~~~cp~C~-~ehl~~l~~~~~~f~~~ 109 (203)
|++++|++ ||+|++++.++ | + +++|+++++||++||+|||++|||+|+ .| +|.|++++++|+++
T Consensus 1 m~~~~G~~----aP~f~l~~~~~---g-----~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e-~~~l~~~~~~~~~~ 67 (241)
T 1nm3_A 1 MSSMEGKK----VPQVTFRTRQG---D-----KWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSH-LPRYNELAPVFKKY 67 (241)
T ss_dssp --CCTTSB----CCCCEEEEEET---T-----EEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTH-HHHHHHHHHHHHHT
T ss_pred CCccCCCC----CCCeEEEcccC---C-----CceeecHHHHhCCCeEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHC
Confidence 45789999 69999999632 2 5 899999449998888777899999999 99 99999999999999
Q ss_pred CC-cEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeecCC
Q 028808 110 GI-DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAP 188 (203)
Q Consensus 110 gv-~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~ 188 (203)
|+ + |++||.|+++.+++|+++++++ +||+++|++++++++||+.......|++.++.|++|||.+|+|+++++++++
T Consensus 68 ~~~~-vv~is~d~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~ 145 (241)
T 1nm3_A 68 GVDD-ILVVSVNDTFVMNAWKEDEKSE-NISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNE 145 (241)
T ss_dssp TCCE-EEEEESSCHHHHHHHHHHTTCT-TSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEEETTEEEEEEECCSC
T ss_pred CCCE-EEEEEcCCHHHHHHHHHhcCCC-ceEEEECCCcHHHHHhCceeecccccCcccceeEEEEEECCEEEEEEEeccC
Confidence 99 8 9999999999999999999985 5999999999999999997643323433346789999999999999998765
Q ss_pred CC--cccCCHHHHHhcC
Q 028808 189 SK--MKVSGGDVILGQI 203 (203)
Q Consensus 189 ~~--~~~~~a~~vL~~l 203 (203)
.+ ++..+++++|+.|
T Consensus 146 ~~~~~~~~~~~~il~~l 162 (241)
T 1nm3_A 146 PGDPFKVSDADTMLKYL 162 (241)
T ss_dssp SSCCCSSSSHHHHHHHH
T ss_pred CCccceecCHHHHHHHh
Confidence 42 3447899998764
No 14
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.97 E-value=1.8e-31 Score=216.91 Aligned_cols=169 Identities=28% Similarity=0.442 Sum_probs=138.9
Q ss_pred ccccccccCCCccccCCC--ceEEecc--ccc-cC-CCCCCceeeeccccc-CCCeEEEEEeeCCCCCCCCccchhhHHH
Q 028808 29 SRAYASVAVGSDIVSAAQ--DVSLQKA--RTW-DE-GVSSNFATTPIKDIF-KGKKVVIFGLPGAYTGVCSNQHVPSYKN 101 (203)
Q Consensus 29 ~~~~~~~~~G~~~~~~AP--df~l~~~--~g~-~~-G~~~~~~~vsL~dl~-~gk~vVL~~f~~~~cp~C~~ehl~~l~~ 101 (203)
..+.|...+|+++ | |+++.-. ++. .+ -..+.-++++|++++ +||+|||+++||+|||+|+.+|+|.|.+
T Consensus 20 ~~~~~~~~v~~~~----P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~ 95 (199)
T 4h86_A 20 HMASMSDLVNKKF----PAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYIN 95 (199)
T ss_dssp CCCCBCTTTTSBC----CCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHH
T ss_pred hhhhhHHHhCCCC----CCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHH
Confidence 4456788999996 7 4554322 110 00 011223789999866 6999999999999999999999999999
Q ss_pred hHHHH-HHcCCcEEEEEecCCHHHHHHHHHHhCCC--CceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCE
Q 028808 102 NIDKF-KAKGIDSVICVAVNDPYVMNGWAEKLQAK--DVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGR 178 (203)
Q Consensus 102 ~~~~f-~~~gv~~vi~IS~d~~~~~~~~~~~~~l~--~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~ 178 (203)
.+++| +++|+++|++||+||++++++|.++++.+ .++++++|++++++++||+..+.. +++.|++|+++|||||+
T Consensus 96 ~~d~~~k~kGvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~--~gg~RS~Rya~IVdDGv 173 (199)
T 4h86_A 96 YLDELVKEKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVG--DGVYWSGRWAMVVENGI 173 (199)
T ss_dssp HHHHHHHHSCCCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEE--TTEEEECSEEEEEETTE
T ss_pred HHHHHHHhcCCcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecC--CCcceeeEEEEEEECCE
Confidence 99886 88999889999999999999999998874 259999999999999999976432 34568999999999999
Q ss_pred EEEEEeecCCC-CcccCCHHHHHhcC
Q 028808 179 IKALNVEEAPS-KMKVSGGDVILGQI 203 (203)
Q Consensus 179 I~~~~~~~~~~-~~~~~~a~~vL~~l 203 (203)
|++.+++++|+ ++++++||+||++|
T Consensus 174 V~~~~vE~~pg~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 174 VTYAAKETNPGTDVTVSSVESVLAHL 199 (199)
T ss_dssp EEEEEECSSTTTCCSTTSHHHHHTTC
T ss_pred EEEEEEeCCCCCCCcccCHHHHHhcC
Confidence 99999999876 58999999999987
No 15
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.97 E-value=2.5e-31 Score=211.74 Aligned_cols=153 Identities=14% Similarity=0.142 Sum_probs=125.9
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
...+++|+.+..+||+|++++.+| ++++|++ ++||++||+|||++|||+|..| ++.|++++++|+++|+
T Consensus 18 ~~~l~~Gd~ig~~aP~f~l~~~~G---------~~v~l~d-~~Gk~vvl~f~~~~~c~~C~~e-l~~l~~l~~~~~~~~~ 86 (179)
T 3ixr_A 18 GSHMNIGDTLNHSLLNHPLMLSGS---------TCKTLSD-YTNQWLVLYFYPKDNTPGSSTE-GLEFNLLLPQFEQINA 86 (179)
T ss_dssp CCSSCTTCBCCHHHHHCCEEEGGG---------EEECGGG-GTTSEEEEEECSCTTSHHHHHH-HHHHHHHHHHHHTTTE
T ss_pred CcccCcCcccCCcCCCeeEECCCC---------CEEeHHH-HCCCCEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHCCC
Confidence 456888888444459999999986 8999999 5999888888889999999999 9999999999999999
Q ss_pred cEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCC-CCcceEEEEEe-CCEEEEEEeecCCC
Q 028808 112 DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLG-PRSERWSAYVE-DGRIKALNVEEAPS 189 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~-~~~~r~tfIId-dG~I~~~~~~~~~~ 189 (203)
+ |++||.|+++.+++|+++++++ ||+++|++++++++||+.......|.. ....|++|||| +|+|++++.+..
T Consensus 87 ~-vv~Vs~D~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~-- 161 (179)
T 3ixr_A 87 T-VLGVSRDSVKSHDSFCAKQGFT--FPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVK-- 161 (179)
T ss_dssp E-EEEEESCCHHHHHHHHHHHTCC--SCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCC--
T ss_pred E-EEEEcCCCHHHHHHHHHHcCCc--eEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCC--
Confidence 8 9999999999999999999996 999999999999999997643211110 01358899999 999999994322
Q ss_pred CcccCCHHHHHhc
Q 028808 190 KMKVSGGDVILGQ 202 (203)
Q Consensus 190 ~~~~~~a~~vL~~ 202 (203)
...+++++|+.
T Consensus 162 --~~~~~~~il~~ 172 (179)
T 3ixr_A 162 --VPGHAEEVLNK 172 (179)
T ss_dssp --STTHHHHHHHH
T ss_pred --CCCCHHHHHHH
Confidence 23566776654
No 16
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.97 E-value=7.3e-30 Score=211.92 Aligned_cols=144 Identities=10% Similarity=0.087 Sum_probs=121.0
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCC-----ccchhhHHHhHHHHH
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCS-----NQHVPSYKNNIDKFK 107 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~-----~ehl~~l~~~~~~f~ 107 (203)
..+++|++ ||+|+|++.+| ++++|++ ++||++||+|||+.|||+|+ .| ++.|++. |
T Consensus 20 ~~l~vG~~----APdFtL~d~~G---------~~vsLsd-~~Gk~vVL~F~ps~~cp~C~~~~~~~E-l~~~~~~---~- 80 (224)
T 3keb_A 20 DFPRKGDY----LPSFMLVDDQK---------HDAALES-FSHTPKLIVTLLSVDEDEHAGLLLLRE-TRRFLDS---W- 80 (224)
T ss_dssp CCCCTTCB----CCCCEEEETTS---------CEEEGGG-GTTCCEEEEECSCTTCSTTTSHHHHHH-HHHHHTT---C-
T ss_pred CcCCCCCC----CCCeEEECCCC---------CEEeHHH-hCCCcEEEEEEeCCCCCCCCCCccHHH-HHHHHHH---c-
Confidence 45899999 69999999876 8999999 59998888888888899999 99 8999987 4
Q ss_pred HcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeC-CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 108 AKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDF-DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 108 ~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~-~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+|++ ||+||.|+++.+++|+++++++ +||+++|+ +++++++||+....... .| .+.|++|||| +|+|+|+++.
T Consensus 81 -~gv~-VvgIS~Ds~~~~~~f~~~~gl~-~fplLsD~~~~~vak~yGv~~~~~~~-~G-~~~p~tfvID~dG~I~~~~~~ 155 (224)
T 3keb_A 81 -PHLK-LIVITVDSPSSLARARHEHGLP-NIALLSTLRGRDFHKRYGVLITEYPL-SG-YTSPAIILADAANVVHYSERL 155 (224)
T ss_dssp -TTSE-EEEEESSCHHHHHHHHHHHCCT-TCEEEESTTCTTHHHHTTCBCCSTTS-TT-CBCCEEEEECTTCBEEEEEEC
T ss_pred -CCCE-EEEEECCCHHHHHHHHHHcCCC-CceEEEcCCchHHHHHhCCccccccc-cC-CccCEEEEEcCCCEEEEEEec
Confidence 7898 9999999999999999999994 49999999 79999999998643110 11 3579999999 9999999998
Q ss_pred cCCCCcccCCHHHHHhc
Q 028808 186 EAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 186 ~~~~~~~~~~a~~vL~~ 202 (203)
+++. ...+.+++|+.
T Consensus 156 ~~~~--~~pd~~evl~~ 170 (224)
T 3keb_A 156 ANTR--DFFDFDAIEKL 170 (224)
T ss_dssp SBTT--CCCCHHHHHHH
T ss_pred CCCC--CCCCHHHHHHH
Confidence 7654 24566766664
No 17
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.97 E-value=1.1e-30 Score=215.63 Aligned_cols=148 Identities=16% Similarity=0.245 Sum_probs=121.5
Q ss_pred ccccCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCC-eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGK-KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk-~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
|++++|++ ||+|++.+. +| +++|+++ +|| ++||+|||++|||+|+.| ++.|++++++|+++
T Consensus 1 m~l~iG~~----aP~F~l~~~~~~G----------~v~l~d~-~Gk~~vvL~f~~a~~cp~C~~e-l~~l~~l~~~f~~~ 64 (220)
T 1xcc_A 1 MGYHLGAT----FPNFTAKASGIDG----------DFELYKY-IENSWAILFSHPNDFTPVCTTE-LAELGKMHEDFLKL 64 (220)
T ss_dssp -CCCTTCB----CCCCEECBTTCSS----------CEEHHHH-TTTSEEEEECCSCTTCHHHHHH-HHHHHHTHHHHHTT
T ss_pred CCCCCCCC----CCCcEeecccCCC----------cEeHHHH-cCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHc
Confidence 35789999 699999987 53 6999994 887 899999999999999999 99999999999999
Q ss_pred CCcEEEEEecCCHHHHHHHHH-------HhCCCCceEEEeeCCchHHHHcCCccccccccCC-CCcceEEEEEe-CCEEE
Q 028808 110 GIDSVICVAVNDPYVMNGWAE-------KLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLG-PRSERWSAYVE-DGRIK 180 (203)
Q Consensus 110 gv~~vi~IS~d~~~~~~~~~~-------~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~-~~~~r~tfIId-dG~I~ 180 (203)
|++ ||+||+|+.+.+++|.+ +++++ ||+++|++++++++||+.......+.+ ..+.|++|||| +|+|+
T Consensus 65 ~v~-vi~vS~D~~~~~~~~~~~i~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~ 141 (220)
T 1xcc_A 65 NCK-LIGFSCNSKESHDKWIEDIKYYGKLNKWE--IPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIK 141 (220)
T ss_dssp TEE-EEEEESSCHHHHHHHHHHHHHHHTCSCCC--CCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEE
T ss_pred CCE-EEEEeCCCHHHHHHHHHHHHHHhcCCCCc--ceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEE
Confidence 998 99999999999999988 35665 999999999999999997532111111 12579999999 99999
Q ss_pred EEEeecCCCCcccCCHHHHHhc
Q 028808 181 ALNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 181 ~~~~~~~~~~~~~~~a~~vL~~ 202 (203)
++++++...+ .+++++|+.
T Consensus 142 ~~~~~~~~~g---~~~~ell~~ 160 (220)
T 1xcc_A 142 ATVLYPATTG---RNAHEILRV 160 (220)
T ss_dssp EEEEECTTBC---CCHHHHHHH
T ss_pred EEEecCCCCC---CCHHHHHHH
Confidence 9999865432 356666653
No 18
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.96 E-value=1.6e-29 Score=198.25 Aligned_cols=147 Identities=17% Similarity=0.266 Sum_probs=123.2
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
+.+++|++ ||+|++++.+| ++++|++ ++||++||+||+++|||+|..| +|.|++++++| +|++
T Consensus 15 ~~~~~G~~----~P~f~l~~~~G---------~~v~l~~-~~gk~vvl~f~~~~~c~~C~~e-~~~l~~~~~~~--~~v~ 77 (165)
T 1q98_A 15 HFPQVGEI----VENFILVGNDL---------ADVALND-FASKRKVLNIFPSIDTGVCATS-VRKFNQQAAKL--SNTI 77 (165)
T ss_dssp CCCCTTCB----CCCCEEECTTS---------CEEEGGG-GTTSEEEEEECSCSCSSCCCHH-HHHHHHHHHHS--TTEE
T ss_pred ccCCCCCC----CCCeEEECCCC---------CEEehHH-hCCCeEEEEEECCCCCCccHHH-HHHHHHHHHHc--CCCE
Confidence 46889999 69999999876 8999999 5999665555559999999999 99999999999 7898
Q ss_pred EEEEEecCCHHHHHHHHHHhCCCCceEEEeeC-CchHHHHcCCccccc-cccCCCCcceEEEEEe-CCEEEEEEeecCCC
Q 028808 113 SVICVAVNDPYVMNGWAEKLQAKDVIEFYGDF-DGSFHKSLDLGKDLS-AALLGPRSERWSAYVE-DGRIKALNVEEAPS 189 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~-~~~v~~~yGv~~~~~-~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~ 189 (203)
|++||.|+++.+++|+++++++ +||+++|+ +++++++||+..... ..| ...|++|||| +|+|++++++.+..
T Consensus 78 -vv~Is~d~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~~gv~~~~~~~~g---~~~p~~~liD~~G~i~~~~~~~~~~ 152 (165)
T 1q98_A 78 -VLCISADLPFAQARFCGAEGIE-NAKTVSTFRNHALHSQLGVDIQTGPLAG---LTSRAVIVLDEQNNVLHSQLVEEIK 152 (165)
T ss_dssp -EEEEESSCHHHHTTCTTTTTCT-TEEEEECTTCTHHHHHTTCEECSSTTTT---SBCCEEEEECTTSBEEEEEECSBTT
T ss_pred -EEEEeCCCHHHHHHHHHHcCCC-ceEEeeccccchHHHHhCceecccccCC---ccceeEEEEcCCCEEEEEEeCCCCC
Confidence 9999999999999999999992 39999998 899999999975321 011 2458999999 99999999975432
Q ss_pred CcccCCHHHHHhcC
Q 028808 190 KMKVSGGDVILGQI 203 (203)
Q Consensus 190 ~~~~~~a~~vL~~l 203 (203)
...+.+++|+.|
T Consensus 153 --~~~~~~~~l~~l 164 (165)
T 1q98_A 153 --EEPNYEAALAVL 164 (165)
T ss_dssp --SCCCHHHHHHTT
T ss_pred --CCCCHHHHHHhh
Confidence 357899999875
No 19
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.96 E-value=4.2e-30 Score=199.71 Aligned_cols=150 Identities=15% Similarity=0.175 Sum_probs=121.3
Q ss_pred ccccccCCCccccCCCceE--EeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH
Q 028808 31 AYASVAVGSDIVSAAQDVS--LQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 31 ~~~~~~~G~~~~~~APdf~--l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
.+..+++|++ ||+|+ +++.+| ++++|++ ++||++||+||+++|||+|..| ++.|++++++|++
T Consensus 3 ~m~~l~~G~~----~P~f~~~l~~~~G---------~~~~l~~-~~gk~~vl~F~~~~~c~~C~~~-~~~l~~~~~~~~~ 67 (163)
T 3gkn_A 3 AMTDAVLELP----AATFDLPLSLSGG---------TQTTLRA-HAGHWLVIYFYPKDSTPGATTE-GLDFNALLPEFDK 67 (163)
T ss_dssp -CCCCCCCCC----GGGGGCCEECSTT---------CEECSGG-GTTSCEEEEECSCTTSHHHHHH-HHHHHHHHHHHHH
T ss_pred cccccccCCc----CCCccccccCCCC---------CEEEHHH-hCCCcEEEEEeCCCCCCcHHHH-HHHHHHHHHHHHH
Confidence 3446899999 59999 999876 8999999 5999655544445999999999 9999999999999
Q ss_pred cCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCC-CCcceEEEEEe-CCEEEEEEeec
Q 028808 109 KGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLG-PRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 109 ~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~-~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+|++ ||+||.|+++.+++|+++++++ ||+++|.+++++++||+.......|.. ....|++|||| +|+|++++.+.
T Consensus 68 ~~~~-vv~vs~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~ 144 (163)
T 3gkn_A 68 AGAK-ILGVSRDSVKSHDNFCAKQGFA--FPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKV 144 (163)
T ss_dssp TTCE-EEEEESSCHHHHHHHHHHHCCS--SCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSC
T ss_pred CCCE-EEEEeCCCHHHHHHHHHHhCCC--ceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCC
Confidence 9998 9999999999999999999996 999999999999999997643221110 00158899999 99999999433
Q ss_pred CCCCcccCCHHHHHhc
Q 028808 187 APSKMKVSGGDVILGQ 202 (203)
Q Consensus 187 ~~~~~~~~~a~~vL~~ 202 (203)
.+ ..+.+++|+.
T Consensus 145 ~~----~~~~~~il~~ 156 (163)
T 3gkn_A 145 KV----AGHADAVLAA 156 (163)
T ss_dssp CS----TTHHHHHHHH
T ss_pred Cc----ccCHHHHHHH
Confidence 22 3566676654
No 20
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.96 E-value=8.9e-30 Score=199.65 Aligned_cols=144 Identities=18% Similarity=0.265 Sum_probs=122.5
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ ||+|++++.+| ++++|++ ++||++||+|||++|||+|..| +|.|++++++ +|++
T Consensus 18 ~~l~~G~~----aP~f~l~~~~G---------~~~~l~~-~~Gk~vvl~f~~~~~c~~C~~~-~~~l~~~~~~---~~~~ 79 (166)
T 3p7x_A 18 QQINEGDF----APDFTVLDNDL---------NQVTLAD-YAGKKKLISVVPSIDTGVCDQQ-TRKFNSDASK---EEGI 79 (166)
T ss_dssp CCCCTTSB----CCCCEEECTTS---------CEEEGGG-GTTSCEEEEECSCTTSHHHHHH-HHHHHHHSCT---TTSE
T ss_pred ccCCCCCC----CCCeEEEcCCC---------CEEeHHH-hCCCcEEEEEECCCCCCccHHH-HHHHHHHhhc---CCCE
Confidence 57899999 69999999886 8999999 5999887777779999999999 9999999887 7898
Q ss_pred EEEEEecCCHHHHHHHHHHhCCCCceEEEeeC-CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCC
Q 028808 113 SVICVAVNDPYVMNGWAEKLQAKDVIEFYGDF-DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSK 190 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~-~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~ 190 (203)
|++||.|+++.+++|+++++++ +||+++|+ +++++++||+..... | ...|++|||| +|+|++++++.+..
T Consensus 80 -vv~is~d~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~~gv~~~~~--g---~~~p~~~liD~~G~i~~~~~~~~~~- 151 (166)
T 3p7x_A 80 -VLTISADLPFAQKRWCASAGLD-NVITLSDHRDLSFGENYGVVMEEL--R---LLARAVFVLDADNKVVYKEIVSEGT- 151 (166)
T ss_dssp -EEEEESSCHHHHHHHHHHHTCS-SCEEEECTTTCHHHHHHTCEETTT--T---EECCEEEEECTTCBEEEEEECSBTT-
T ss_pred -EEEEECCCHHHHHHHHHHcCCC-ceEEccCCchhHHHHHhCCccccC--C---ceeeEEEEECCCCeEEEEEEcCCcc-
Confidence 9999999999999999999993 39999999 999999999976421 2 1368999999 99999999887543
Q ss_pred cccCCHHHHHhcC
Q 028808 191 MKVSGGDVILGQI 203 (203)
Q Consensus 191 ~~~~~a~~vL~~l 203 (203)
...+.+++|+.|
T Consensus 152 -~~~~~~~il~~l 163 (166)
T 3p7x_A 152 -DFPDFDAALAAY 163 (166)
T ss_dssp -SCCCHHHHHHHH
T ss_pred -cCCCHHHHHHHH
Confidence 245677777653
No 21
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.96 E-value=5.6e-30 Score=211.97 Aligned_cols=146 Identities=15% Similarity=0.219 Sum_probs=121.9
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCC-eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGK-KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk-~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
.+++|++ ||+|++.+.+| +++|+++ +|| ++||+|||++|||+|+.| ++.|++++++|+++|++
T Consensus 4 ~l~~G~~----aP~F~l~~~~G----------~v~l~d~-~Gk~~vvL~~~~a~~cp~C~~e-l~~l~~l~~~f~~~~v~ 67 (224)
T 1prx_A 4 GLLLGDV----APNFEANTTVG----------RIRFHDF-LGDSWGILFSHPRDFTPVCTTE-LGRAAKLAPEFAKRNVK 67 (224)
T ss_dssp -CCTTCB----CCCCEEEETTE----------EEEHHHH-HTTSEEEEEEESCSSCHHHHHH-HHHHHHHHHHHHTTTEE
T ss_pred cCCCcCC----CCCcEEecCCC----------CEEHHHH-cCCCeEEEEEECCCCCCCcHHH-HHHHHHHHHHHHHCCCE
Confidence 4789999 69999999863 6999995 776 899999999999999999 99999999999999998
Q ss_pred EEEEEecCCHHHHHHHHHH----------hCCCCceEEEeeCCchHHHHcCCcccccc--ccCCCCcceEEEEEe-CCEE
Q 028808 113 SVICVAVNDPYVMNGWAEK----------LQAKDVIEFYGDFDGSFHKSLDLGKDLSA--ALLGPRSERWSAYVE-DGRI 179 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~----------~~l~~~fpllsD~~~~v~~~yGv~~~~~~--~g~~~~~~r~tfIId-dG~I 179 (203)
||+||.|+.+.+++|+++ ++++ ||+++|.+++++++||+...... .|. ..+.|++|||| +|+|
T Consensus 68 -vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I 143 (224)
T 1prx_A 68 -LIALSIDSVEDHLAWSKDINAYNSEEPTEKLP--FPIIDDRNRELAILLGMLDPAEKDEKGM-PVTARVVFVFGPDKKL 143 (224)
T ss_dssp -EEEEESSCHHHHHHHHHHHHHHTTSCCCSCCS--SCEEECTTCHHHHHTTSSCSCTTCSSSC-CTTCCEEEEECTTSBE
T ss_pred -EEEEcCCCHHHHHHHHHHHHHhhCcccccCcC--cceeecCchHHHHHhCCCCcccccCCCc-cccceEEEEECCCCEE
Confidence 999999999999999987 6775 99999999999999999753211 111 23579999999 9999
Q ss_pred EEEEeecCCCCcccCCHHHHHhc
Q 028808 180 KALNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 180 ~~~~~~~~~~~~~~~~a~~vL~~ 202 (203)
+++++++...+ .+.+++|+.
T Consensus 144 ~~~~~~~~~~g---r~~~eil~~ 163 (224)
T 1prx_A 144 KLSILYPATTG---RNFDEILRV 163 (224)
T ss_dssp EEEEECCTTBC---CCHHHHHHH
T ss_pred EEEEecCCCCC---CCHHHHHHH
Confidence 99999865432 356666654
No 22
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.96 E-value=1.7e-29 Score=205.21 Aligned_cols=147 Identities=15% Similarity=0.281 Sum_probs=125.1
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ ||+|++++.+| ++++|++ ++||++||+||+++|||+|..| ++.|++++++| +|++
T Consensus 50 ~~l~~G~~----aPdf~l~d~~G---------~~v~L~d-~~Gk~vvl~F~~~~~c~~C~~e-~~~l~~l~~~~--~~v~ 112 (200)
T 3zrd_A 50 KLPQIGDK----AKDFTLVAKDL---------SDVALSS-FAGKRKVLNIFPSIDTGVCAAS-VRKFNQLAGEL--ENTV 112 (200)
T ss_dssp CCCCTTCB----CCCCEEECTTS---------CEEEGGG-GTTSEEEEEECSCCCCSCCCHH-HHHHHHHHHTS--TTEE
T ss_pred ccCCCCCC----CCCeEEECCCC---------CEEcHHH-hCCCcEEEEEECCCCCchhHHH-HHHHHHHHHHh--CCCE
Confidence 46899999 69999999886 8999999 5999777766669999999999 99999999999 6898
Q ss_pred EEEEEecCCHHHHHHHHHHhCC-CCceEEEeeC-CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCC
Q 028808 113 SVICVAVNDPYVMNGWAEKLQA-KDVIEFYGDF-DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPS 189 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l-~~~fpllsD~-~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~ 189 (203)
||+||.|+++.+++|++++++ + ||+++|+ +++++++||+..... ++.....|++|||| +|+|++++++.+..
T Consensus 113 -vv~Is~D~~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~~ygv~~~~~--~~~g~~~p~~~lID~~G~I~~~~~~~~~~ 187 (200)
T 3zrd_A 113 -VLCISSDLPFAQSRFCGAEGLSN--VITLSTLRGADFKQAYGVAITEG--PLAGLTARAVVVLDGQDNVIYSELVNEIT 187 (200)
T ss_dssp -EEEEESSCHHHHTTCTTTTTCTT--EEEEETTSCTHHHHHTTCEECSS--TTTTSBCCEEEEECTTSBEEEEEECSBTT
T ss_pred -EEEEECCCHHHHHHHHHHcCCCC--ceEEecCchHHHHHHhCceeecc--cCCCccccEEEEECCCCeEEEEEecCCcc
Confidence 999999999999999999999 6 9999999 999999999975321 11112468999999 99999999986543
Q ss_pred CcccCCHHHHHhcC
Q 028808 190 KMKVSGGDVILGQI 203 (203)
Q Consensus 190 ~~~~~~a~~vL~~l 203 (203)
+..+.+++|++|
T Consensus 188 --~~~~~~~~l~~L 199 (200)
T 3zrd_A 188 --TEPNYDAALAAL 199 (200)
T ss_dssp --SCCCHHHHHHHH
T ss_pred --cCCCHHHHHHhh
Confidence 366888888764
No 23
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.96 E-value=5.5e-30 Score=213.63 Aligned_cols=148 Identities=16% Similarity=0.205 Sum_probs=121.3
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCC-eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGK-KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk-~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
|++++|++ ||+|++.+.+| +++|+++ +|| ++||+|||++|||+|+.| ++.|++++++|+++|+
T Consensus 1 M~l~iG~~----aPdF~l~~~~G----------~v~l~d~-~Gk~~vvL~f~pa~~cpvC~~e-l~~l~~l~~ef~~~~v 64 (233)
T 2v2g_A 1 MGITLGEV----FPNFEADSTIG----------KLKFHDW-LGNSWGVLFSHPRDFTPVSTTE-LGRVIQLEGDFKKRGV 64 (233)
T ss_dssp -CCCTTCB----CCCCEEEETTC----------CEEHHHH-HCSSEEEEEECSCSSCHHHHHH-HHHHHHTHHHHHHTTE
T ss_pred CCCCCCCC----CCCcEEecCCC----------CEEHHHH-CCCCeEEEEEECCCCCCCcHHH-HHHHHHHHHHHHHcCC
Confidence 35789999 69999999863 6999995 887 888887789999999999 9999999999999999
Q ss_pred cEEEEEecCCHHHHHHHHH------Hh--CCCCceEEEeeCCchHHHHcCCccccccccCC-CCcceEEEEEe-CCEEEE
Q 028808 112 DSVICVAVNDPYVMNGWAE------KL--QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLG-PRSERWSAYVE-DGRIKA 181 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~------~~--~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~-~~~~r~tfIId-dG~I~~ 181 (203)
+ ||+||+|+.+.+++|++ ++ +++ ||+++|++++++++||+.......+.+ ..+.|++|||| +|+|++
T Consensus 65 ~-vigIS~D~~~~~~~~~~~i~~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~ 141 (233)
T 2v2g_A 65 K-LIALSCDNVADHKEWSEDVKCLSGVKGDMP--YPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKL 141 (233)
T ss_dssp E-EEEEESSCHHHHHHHHHHHHHHHTCCSSCS--SCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEE
T ss_pred E-EEEEcCCCHHHHHHHHHHHHHhhCcccCCc--eEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEE
Confidence 8 99999999999999998 45 675 999999999999999997532111111 12569999999 999999
Q ss_pred EEeecCCCCcccCCHHHHHhc
Q 028808 182 LNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 182 ~~~~~~~~~~~~~~a~~vL~~ 202 (203)
+++++...+ .+++++|+.
T Consensus 142 ~~~~~~~~g---r~~~eilr~ 159 (233)
T 2v2g_A 142 SILYPATTG---RNFSEILRV 159 (233)
T ss_dssp EEEECTTBC---CCHHHHHHH
T ss_pred EEecCCCCC---CCHHHHHHH
Confidence 999865322 356776654
No 24
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.96 E-value=7.1e-30 Score=222.14 Aligned_cols=131 Identities=14% Similarity=0.178 Sum_probs=115.2
Q ss_pred CCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHH
Q 028808 44 AAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPY 123 (203)
Q Consensus 44 ~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~ 123 (203)
.||+|+|++.+| ++++|+| ++||+|||+|||++|||+|+.| ++.|++. ...|++ |+|||.|+++
T Consensus 3 k~p~F~l~~~~G---------~~~~Lsd-~~Gk~vvl~F~p~~~tp~C~~e-~~~~~~~----~~~~~~-v~gis~D~~~ 66 (322)
T 4eo3_A 3 RVKHFELLTDEG---------KTFTHVD-LYGKYTILFFFPKAGTSGSTRE-AVEFSRE----NFEKAQ-VVGISRDSVE 66 (322)
T ss_dssp BCCCCEEEETTS---------CEEEGGG-TTTSEEEEEECSSTTSHHHHHH-HHHHHHS----CCTTEE-EEEEESCCHH
T ss_pred CCCCcEEECCCc---------CEEeHHH-hCCCeEEEEEECCCCCCCCHHH-HHHHHHH----hhCCCE-EEEEeCCCHH
Confidence 379999999986 8999999 5999999999999999999999 9999753 234787 9999999999
Q ss_pred HHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCcccCCHHHHHhc
Q 028808 124 VMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 124 ~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~~~~~a~~vL~~ 202 (203)
.+++|+++++++ ||+|+|++++++++||+... | .+.|+||||| +|+|++++.+..++ .|+++||+.
T Consensus 67 ~~~~f~~~~~l~--fp~l~D~~~~v~~~ygv~~~----~---~~~r~tfiId~~G~i~~~~~~v~~~----~h~~~~l~~ 133 (322)
T 4eo3_A 67 ALKRFKEKNDLK--VTLLSDPEGILHEFFNVLEN----G---KTVRSTFLIDRWGFVRKEWRRVKVE----GHVQEVKEA 133 (322)
T ss_dssp HHHHHHHHHTCC--SEEEECTTCHHHHHTTCEET----T---EECCEEEEECTTSBEEEEEESCCST----THHHHHHHH
T ss_pred HHHHHHHhhCCc--eEEEEcCchHHHHhcCCCCC----C---cCccEEEEECCCCEEEEEEeCCCcc----ccHHHHHHH
Confidence 999999999997 99999999999999999742 1 3579999999 99999999877653 699999986
Q ss_pred C
Q 028808 203 I 203 (203)
Q Consensus 203 l 203 (203)
|
T Consensus 134 ~ 134 (322)
T 4eo3_A 134 L 134 (322)
T ss_dssp H
T ss_pred H
Confidence 4
No 25
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.96 E-value=2.6e-29 Score=211.90 Aligned_cols=147 Identities=16% Similarity=0.301 Sum_probs=123.1
Q ss_pred cccccCCCccccCCCceEEecc-ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKA-RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~-~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g 110 (203)
...+++|++ ||+|++++. ++ +| ++++|++ ++||++||+|||++|||+|..| ++.|++++++|+++|
T Consensus 59 ~~~l~vG~~----aPdF~l~~l~d~--~G-----~~vsLsd-~kGK~vvL~F~~a~~cp~C~~e-l~~l~~l~~~~~~~g 125 (254)
T 3tjj_A 59 LSKAKISKP----APYWEGTAVIDG--EF-----KELKLTD-YRGKYLVFFFYPLDFTFVCPTE-IIAFGDRLEEFRSIN 125 (254)
T ss_dssp CCCCCTTSB----CCCCEEEEEETT--EE-----EEEEGGG-GTTSEEEEEECSCTTCSSCCHH-HHHHHHTHHHHHTTT
T ss_pred ccccCCCCC----CCCcEeeeecCC--CC-----cEEeHHH-HCCCeEEEEEECCCCCCchHHH-HHHHHHHHHHHHHcC
Confidence 356889999 699999865 22 22 8999999 5999877777779999999999 999999999999999
Q ss_pred CcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 111 IDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 111 v~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
++ ||+||.|+++.+++|++++ +++ ||+++|.+++++++||+..... | .+.|++|||| +|+|+++
T Consensus 126 v~-vv~IS~D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~va~~ygv~~~~~--g---~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 126 TE-VVACSVDSQFTHLAWINTPRRQGGLGPIR--IPLLSDLTHQISKDYGVYLEDS--G---HTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp EE-EEEEESSCHHHHHHHHTSCGGGTSCCSCS--SCEEECTTSHHHHHHTCEETTT--T---EECEEEEEECTTSBEEEE
T ss_pred CE-EEEEcCCCHHHHHHHHHHHHHhcCCcccc--cceeeCcHHHHHHHcCCccccC--C---CccceEEEECCCCeEEEE
Confidence 98 9999999999999999887 675 9999999999999999976422 2 2568999999 9999999
Q ss_pred EeecCCCCcccCCHHHHHhc
Q 028808 183 NVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 183 ~~~~~~~~~~~~~a~~vL~~ 202 (203)
++++.+.+ .+++++|+.
T Consensus 198 ~~~~~~~~---~~~~eil~~ 214 (254)
T 3tjj_A 198 TLNDLPVG---RSVDETLRL 214 (254)
T ss_dssp EEECTTCC---CCHHHHHHH
T ss_pred EecCCCCC---CCHHHHHHH
Confidence 99865432 455666553
No 26
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.96 E-value=4.5e-29 Score=195.09 Aligned_cols=142 Identities=22% Similarity=0.349 Sum_probs=119.8
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEee-CCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLP-GAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~-~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
+.+++|++ +|+|++++.+| ++++|++ ++||++| ++|| ++|||+|..| +|.|++++++| +|+
T Consensus 14 ~~~~~G~~----~P~f~l~~~~G---------~~v~l~~-~~gk~vv-l~F~~~~~c~~C~~~-~~~l~~~~~~~--~~v 75 (163)
T 1psq_A 14 KQLQVGDK----ALDFSLTTTDL---------SKKSLAD-FDGKKKV-LSVVPSIDTGICSTQ-TRRFNEELAGL--DNT 75 (163)
T ss_dssp CCCCTTSB----CCCCEEECTTS---------CEEEGGG-GTTSEEE-EEECSCTTSHHHHHH-HHHHHHHTTTC--TTE
T ss_pred CCCCCCCC----CCCEEEEcCCC---------cEeeHHH-hCCCEEE-EEEECCCCCCccHHH-HHHHHHHHHHc--CCc
Confidence 46889999 69999999876 8999999 5999654 4555 6999999999 99999999999 689
Q ss_pred cEEEEEecCCHHHHHHHHHHhCC-CCceEEEee-CCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCC
Q 028808 112 DSVICVAVNDPYVMNGWAEKLQA-KDVIEFYGD-FDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAP 188 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~~~~l-~~~fpllsD-~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~ 188 (203)
+ |++||.|+++.+++|++++++ + ||+++| .+++++++||+.... .|+ ..|++|||| +|+|++++.+.+.
T Consensus 76 ~-vv~is~d~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~~gv~~~~--~g~---~~p~~~liD~~G~i~~~~~g~~~ 147 (163)
T 1psq_A 76 V-VLTVSMDLPFAQKRWCGAEGLDN--AIMLSDYFDHSFGRDYALLINE--WHL---LARAVFVLDTDNTIRYVEYVDNI 147 (163)
T ss_dssp E-EEEEESSCHHHHHHHHHHHTCTT--SEEEECTTTCHHHHHHTCBCTT--TCS---BCCEEEEECTTCBEEEEEECSBT
T ss_pred E-EEEEECCCHHHHHHHHHhcCCCC--cEEecCCchhHHHHHhCCcccc--CCc---eEEEEEEEcCCCeEEEEEecCCc
Confidence 8 999999999999999999999 6 999999 899999999997532 121 358899999 9999999998654
Q ss_pred CCcccCCHHHHHhc
Q 028808 189 SKMKVSGGDVILGQ 202 (203)
Q Consensus 189 ~~~~~~~a~~vL~~ 202 (203)
. +..+++++|+.
T Consensus 148 ~--~~~~~~~~l~~ 159 (163)
T 1psq_A 148 N--SEPNFEAAIAA 159 (163)
T ss_dssp T--SCCCHHHHHHH
T ss_pred C--CCCCHHHHHHH
Confidence 3 34566777764
No 27
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.96 E-value=4.2e-29 Score=208.69 Aligned_cols=147 Identities=17% Similarity=0.296 Sum_probs=122.0
Q ss_pred cccccCCCccccCCCceEEecc-ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKA-RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~-~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g 110 (203)
.+.+++|++ ||+|++++. +| +| ++++|++ ++||++||+||+++|||+|..| ++.|++++++|+++|
T Consensus 45 ~~~l~vG~~----aPdF~l~~~~d~--~G-----~~vsLsd-~~Gk~vvL~F~~~~~cp~C~~e-l~~l~~l~~~~~~~g 111 (240)
T 3qpm_A 45 LSKAKISKP----APQWEGTAVING--EF-----KELKLSD-YRGKYLVFFFYPLDFTFVCPTE-IIAFSDRVHEFRAIN 111 (240)
T ss_dssp ECSCCTTSB----CCCCEEEEEETT--EE-----EEEEGGG-GTTSEEEEEECSCTTSSHHHHH-HHHHHHHHHHHHTTT
T ss_pred cCcCCCCCC----CCCcEeeeeeCC--CC-----cEEEHHH-hCCCEEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCC
Confidence 357899999 699999875 32 12 7999999 5999776666566999999999 999999999999999
Q ss_pred CcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 111 IDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 111 v~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
++ ||+||.|+++.+++|++++ +++ ||+++|++++++++||+..... | ...|++|||| +|+|+++
T Consensus 112 v~-vv~Is~D~~~~~~~~~~~~~~~~~~~~~~--fp~l~D~~~~v~~~ygv~~~~~--g---~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 112 TE-VVACSVDSQFTHLAWIITPRKQGGLGPMK--IPLLSDLTHQISKDYGVYLEDQ--G---HTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp EE-EEEEESSCHHHHHHHHHSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEE
T ss_pred CE-EEEEECCCHHHHHHHHHHHHhhcCCCCCc--eeEEeCchHHHHHHhCCccccC--C---CccceEEEEcCCCeEEEE
Confidence 98 9999999999999999987 675 9999999999999999976432 2 2468999999 9999999
Q ss_pred EeecCCCCcccCCHHHHHhc
Q 028808 183 NVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 183 ~~~~~~~~~~~~~a~~vL~~ 202 (203)
++++.+. ..+++++|+.
T Consensus 184 ~~~~~~~---~~~~~eil~~ 200 (240)
T 3qpm_A 184 TMNDLPV---GRSVDETLRL 200 (240)
T ss_dssp EEECTTB---CCCHHHHHHH
T ss_pred EecCCCC---CCCHHHHHHH
Confidence 9986543 2456666654
No 28
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.96 E-value=1e-28 Score=192.41 Aligned_cols=141 Identities=16% Similarity=0.165 Sum_probs=119.5
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEee-CCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLP-GAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~-~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
++++|++ ||+|++++.+| ++++|++ ++||+.||++|| ++|||+|..+ +|.|++++++|+++|++
T Consensus 1 ml~~G~~----~P~f~l~~~~G---------~~~~l~~-~~gk~~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v~ 65 (161)
T 3drn_A 1 MVKVGDK----APLFEGIADNG---------EKISLSD-YIGKHNIVLYFYPKDDTPGSTRE-ASAFRDNWDLLKDYDVV 65 (161)
T ss_dssp -CCTTSB----CCCCEEEETTS---------CEEEGGG-TTTTSEEEEEECSCTTCHHHHHH-HHHHHHTHHHHHTTCEE
T ss_pred CCCCCCc----CCCeEeecCCC---------CEEEHHH-hcCCCCEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHcCCE
Confidence 3789999 69999999886 8999999 599973455566 9999999999 99999999999999998
Q ss_pred EEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCc
Q 028808 113 SVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKM 191 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~ 191 (203)
||+||.|+++.+++|+++++++ ||+++|.+.+++++||+... ....|++|||| +|+|++++.+....
T Consensus 66 -vv~vs~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~-------~~~~P~~~lid~~G~i~~~~~g~~~~-- 133 (161)
T 3drn_A 66 -VIGVSSDDINSHKRFKEKYKLP--FILVSDPDKKIRELYGAKGF-------ILPARITFVIDKKGIIRHIYNSQMNP-- 133 (161)
T ss_dssp -EEEEESCCHHHHHHHHHHTTCC--SEEEECTTSHHHHHTTCCCS-------SSCCCEEEEECTTSBEEEEEECSSCT--
T ss_pred -EEEEeCCCHHHHHHHHHHhCCC--ceEEECCcHHHHHHcCCCCc-------CcccceEEEECCCCEEEEEEecCCCC--
Confidence 9999999999999999999997 99999999999999999731 12468899999 99999999884322
Q ss_pred ccCCHHHHHhc
Q 028808 192 KVSGGDVILGQ 202 (203)
Q Consensus 192 ~~~~a~~vL~~ 202 (203)
..+.+++|+.
T Consensus 134 -~~~~~~il~~ 143 (161)
T 3drn_A 134 -ANHVNEALKA 143 (161)
T ss_dssp -THHHHHHHHH
T ss_pred -CcCHHHHHHH
Confidence 2456666654
No 29
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.96 E-value=1.4e-28 Score=203.11 Aligned_cols=147 Identities=15% Similarity=0.261 Sum_probs=118.0
Q ss_pred cccccCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc
Q 028808 32 YASVAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
++.+++|++ ||+|++++. +| .+++++|+++++||++||+|||++|||+|..| +|.|++++++|+++
T Consensus 22 M~~l~~G~~----aP~F~l~~~~~~G-------~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e-~p~l~~l~~~~~~~ 89 (221)
T 2c0d_A 22 MKLSLVTKK----AYNFTAQGLNKNN-------EIINVDLSSFIGQKYCCLLFYPLNYTFVCPTE-IIEFNKHIKDFENK 89 (221)
T ss_dssp ----CTTSB----CCCCEEEEECTTS-------CEEEEEGGGGTTTCEEEEEECCCCTTTCCHHH-HHHHHHTHHHHHHT
T ss_pred cccCCCCCC----CCCeEEeccccCC-------CccEEeHHHHcCCCeEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHC
Confidence 345899999 699999997 53 12689999943999655544449999999999 99999999999999
Q ss_pred CCcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEE
Q 028808 110 GIDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKA 181 (203)
Q Consensus 110 gv~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~ 181 (203)
|++ ||+||.|+++.+++|++++ +++ ||+++|.+++++++||+. ... | ...|++|||| +|+|++
T Consensus 90 ~v~-vv~Is~D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~-~~~--g---~~~P~~~lID~~G~I~~ 160 (221)
T 2c0d_A 90 NVE-LLGISVDSVYSHLAWKNMPIEKGGIGNVE--FTLVSDINKDISKNYNVL-YDN--S---FALRGLFIIDKNGCVRH 160 (221)
T ss_dssp TEE-EEEEESSCHHHHHHHHHSCGGGTCCCSCS--SEEEECTTSHHHHHTTCE-ETT--T---EECEEEEEECTTSBEEE
T ss_pred CCE-EEEEeCCCHHHHHHHHHHhhhhcCccCCc--eEEEECCchHHHHHcCCc-ccC--C---CccceEEEECCCCeEEE
Confidence 998 9999999999999999998 665 999999999999999997 321 2 2468999999 999999
Q ss_pred EEeecCCCCcccCCHHHHHhc
Q 028808 182 LNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 182 ~~~~~~~~~~~~~~a~~vL~~ 202 (203)
+++++.+. ..+++++++.
T Consensus 161 ~~~g~~~~---~~~~~ell~~ 178 (221)
T 2c0d_A 161 QTVNDLPI---GRNVQEVLRT 178 (221)
T ss_dssp EEEECTTC---CCCHHHHHHH
T ss_pred EEecCCCC---CCCHHHHHHH
Confidence 99886533 2456666553
No 30
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.96 E-value=5e-29 Score=209.89 Aligned_cols=143 Identities=20% Similarity=0.325 Sum_probs=121.4
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeec-cccc-CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPI-KDIF-KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL-~dl~-~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
++.+|++ ||+|++.+.+| +++| ++++ +||++||+|||++|||+|..| ++.|++++++|+++|+
T Consensus 4 ~~~iG~~----aPdF~l~~~~G----------~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tE-l~~l~~l~~ef~~~gv 68 (249)
T 3a2v_A 4 IPLIGER----FPEMEVTTDHG----------VIKLPDHYVSQGKWFVLFSHPADFTPVCTTE-FVSFARRYEDFQRLGV 68 (249)
T ss_dssp ECCTTSB----CCCEEEEETTE----------EEEETHHHHTTTCEEEEECCSCTTCHHHHHH-HHHHHHTHHHHHHTTE
T ss_pred cCCCCCC----CCCeEEEcCCC----------CEecHHHHhhCCCEEEEEEEcCCCCcChHHH-HHHHHHHHHHHHhCCc
Confidence 4688999 69999999864 5999 9943 899999999999999999999 9999999999999999
Q ss_pred cEEEEEecCCHHHHHHHHHH------hCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEe
Q 028808 112 DSVICVAVNDPYVMNGWAEK------LQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~~------~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
+ ||+||+|+.+.+.+|.+. .+++ ||+++|.+++++++||+..... | ..+.|++|||| +|+|+++++
T Consensus 69 ~-VI~VS~Ds~~~~~~w~~~~~~~~~~~i~--fPil~D~~~~ia~~ygv~~~~~--g--~~~~p~~fIID~dG~I~~~~~ 141 (249)
T 3a2v_A 69 D-LIGLSVDSVFSHIKWKEWIERHIGVRIP--FPIIADPQGTVARRLGLLHAES--A--THTVRGVFIVDARGVIRTMLY 141 (249)
T ss_dssp E-EEEEESSCHHHHHHHHHHHHHHTCCCCC--SCEEECTTSHHHHHHTCCCTTC--S--SSCCEEEEEECTTSBEEEEEE
T ss_pred E-EEEEECCCHHHHHHHHHHHHHhcCCCCc--eeEEECCchHHHHHhCCccccC--C--CcccceEEEECCCCeEEEEEe
Confidence 8 999999999999999886 3565 9999999999999999975422 2 23579999999 999999999
Q ss_pred ecCCCCcccCCHHHHHh
Q 028808 185 EEAPSKMKVSGGDVILG 201 (203)
Q Consensus 185 ~~~~~~~~~~~a~~vL~ 201 (203)
++.+.+ .+.+++|+
T Consensus 142 ~~~~~g---r~~~Ellr 155 (249)
T 3a2v_A 142 YPMELG---RLVDEILR 155 (249)
T ss_dssp ECTTBC---CCHHHHHH
T ss_pred cCCccc---chhHHHHH
Confidence 875432 34555554
No 31
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.4e-29 Score=203.38 Aligned_cols=149 Identities=16% Similarity=0.257 Sum_probs=118.9
Q ss_pred cccccccCCCccccCCCceEEecc-ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH
Q 028808 30 RAYASVAVGSDIVSAAQDVSLQKA-RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 30 ~~~~~~~~G~~~~~~APdf~l~~~-~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
.....+++|++ ||+|++++. +| +| ++++|++ ++||++||+|+|++|||+|..| +|.|++++++|++
T Consensus 14 ~~~~~~~~G~~----aP~f~l~~~~~~--~g-----~~v~l~d-~~Gk~vvl~F~pat~C~~C~~e-~~~l~~l~~~~~~ 80 (211)
T 2pn8_A 14 GTENLYFQSMP----APYWEGTAVIDG--EF-----KELKLTD-YRGKYLVFFFYPLDFTFVCPTE-IIAFGDRLEEFRS 80 (211)
T ss_dssp -----CCSSCB----CCCCEEEEEETT--EE-----EEEEGGG-GTTSEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHT
T ss_pred CccccCCCCCc----CCCeEeecccCC--CC-----cEEEHHH-hCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHH
Confidence 33456889999 699999985 32 12 8999999 5999655544449999999999 9999999999999
Q ss_pred cCCcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEE
Q 028808 109 KGIDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIK 180 (203)
Q Consensus 109 ~gv~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~ 180 (203)
+|++ ||+||.|+++.+++|++++ +++ ||+++|++++++++||+..... | ...|++|||| +|+|+
T Consensus 81 ~~v~-vv~Is~D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~~~~~--g---~~~p~~~lID~~G~I~ 152 (211)
T 2pn8_A 81 INTE-VVACSVDSQFTHLAWINTPRRQGGLGPIR--IPLLSDLTHQISKDYGVYLEDS--G---HTLRGLFIIDDKGILR 152 (211)
T ss_dssp TTEE-EEEEESSCHHHHHHHHTSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETTT--T---EECEEEEEECTTSBEE
T ss_pred CCCE-EEEEECCCHHHHHHHHHHhhhccCccCCc--eEEEECCchHHHHHcCCcccCC--C---cccceEEEECCCCEEE
Confidence 9998 9999999999999999988 665 9999999999999999975321 1 2468999999 99999
Q ss_pred EEEeecCCCCcccCCHHHHHhc
Q 028808 181 ALNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 181 ~~~~~~~~~~~~~~~a~~vL~~ 202 (203)
++++++.+. ..+++++++.
T Consensus 153 ~~~~g~~~~---~~~~~ell~~ 171 (211)
T 2pn8_A 153 QITLNDLPV---GRSVDETLRL 171 (211)
T ss_dssp EEEEECTTB---CCCHHHHHHH
T ss_pred EEEecCCCC---CCCHHHHHHH
Confidence 999886432 2466666654
No 32
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.96 E-value=8.1e-29 Score=194.83 Aligned_cols=146 Identities=16% Similarity=0.263 Sum_probs=119.6
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ +|+|++++.+| ++++|++ ++||++||+||+++|||+|..| ++.|++++++| +|++
T Consensus 19 ~~l~~g~~----~P~f~l~~~~G---------~~~~l~~-~~gk~vvl~f~~~~~C~~C~~~-~~~l~~~~~~~--~~v~ 81 (171)
T 2yzh_A 19 PELKVGDR----APEAVVVTKDL---------QEKIVGG-AKDVVQVIITVPSLDTPVCETE-TKKFNEIMAGM--EGVD 81 (171)
T ss_dssp CCCCTTSB----CCCEEEEETTS---------CEEEESS-CCSSEEEEEECSCTTSHHHHHH-HHHHHHHTTTC--TTEE
T ss_pred CcCCCCCc----CCceEEECCCC---------CEeeHHH-hCCCeEEEEEECCCCCCchHHH-HHHHHHHHHHc--CCce
Confidence 46889999 69999999876 8999999 5999766655559999999999 99999999999 7898
Q ss_pred EEEEEecCCHHHHHHHHHHhCCCCceEEEee-CCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCC
Q 028808 113 SVICVAVNDPYVMNGWAEKLQAKDVIEFYGD-FDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSK 190 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD-~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~ 190 (203)
||+||.|+++.+++|+++++++ +||+++| +++++ ++||+...... ..+ ...|++|||| +|+|++++++++..
T Consensus 82 -vv~Is~d~~~~~~~~~~~~~~~-~~~~l~D~~~~~~-~~~gv~~~~~~-~~g-~~~p~~~liD~~G~i~~~~~~~~~~- 155 (171)
T 2yzh_A 82 -VTVVSMDLPFAQKRFCESFNIQ-NVTVASDFRYRDM-EKYGVLIGEGA-LKG-ILARAVFIIDKEGKVAYVQLVPEIT- 155 (171)
T ss_dssp -EEEEESSCHHHHHHHHHHTTCC-SSEEEECTTTCGG-GGGTCBBCSST-TTT-SBCCEEEEECTTSBEEEEEECSBTT-
T ss_pred -EEEEeCCCHHHHHHHHHHcCCC-CeEEeecCccCcH-HHhCCEecccc-cCC-ceeeEEEEEcCCCeEEEEEeCCCcC-
Confidence 9999999999999999999993 3999999 89999 99999754211 011 2468999999 99999999875432
Q ss_pred cccCCHHHHHhc
Q 028808 191 MKVSGGDVILGQ 202 (203)
Q Consensus 191 ~~~~~a~~vL~~ 202 (203)
+..+++++++.
T Consensus 156 -~~~~~~~ll~~ 166 (171)
T 2yzh_A 156 -EEPNYDEVVNK 166 (171)
T ss_dssp -SCCCCHHHHHH
T ss_pred -CCCCHHHHHHH
Confidence 24566777654
No 33
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.95 E-value=2.4e-28 Score=195.78 Aligned_cols=143 Identities=19% Similarity=0.321 Sum_probs=117.3
Q ss_pred cCCCccccCCCceEEeccc-cccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEE
Q 028808 36 AVGSDIVSAAQDVSLQKAR-TWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSV 114 (203)
Q Consensus 36 ~~G~~~~~~APdf~l~~~~-g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~v 114 (203)
++|++ ||+|++++.+ | .+++++|+++ +||++||+||+++|||+|..| +|.|++++++|+++|++ |
T Consensus 2 ~~G~~----aP~f~l~~~~~G-------~~~~v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e-~~~l~~~~~~~~~~~v~-v 67 (186)
T 1n8j_A 2 LINTK----IKPFKNQAFKNG-------EFIEVTEKDT-EGRWSVFFFYPADFTFVSPTE-LGDVADHYEELQKLGVD-V 67 (186)
T ss_dssp CTTCB----CCCCEEEEEETT-------EEEEEEHHHH-TTSEEEEEECSCTTCSHHHHH-HHHHHHHHHHHHHTTEE-E
T ss_pred CCCCc----CCCcEeecccCC-------cceEEEHHHH-CCCeEEEEEECCCCCCccHHH-HHHHHHHHHHHHHCCCE-E
Confidence 57888 6999999974 3 1268999994 999655554447999999999 99999999999999998 9
Q ss_pred EEEecCCHHHHHHHHHHh----CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCC
Q 028808 115 ICVAVNDPYVMNGWAEKL----QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPS 189 (203)
Q Consensus 115 i~IS~d~~~~~~~~~~~~----~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~ 189 (203)
|+||.|+++.+++|++++ +++ ||+++|.+++++++||+..... | ...|++|||| +|+|+++++++.+.
T Consensus 68 v~Is~d~~~~~~~~~~~~~~~~~~~--fp~l~D~~~~~~~~ygv~~~~~--g---~~~p~~~lID~~G~i~~~~~~~~~~ 140 (186)
T 1n8j_A 68 YSVSTDTHFTHKAWHSSSETIAKIK--YAMIGDPTGALTRNFDNMREDE--G---LADRATFVVDPQGIIQAIEVTAEGI 140 (186)
T ss_dssp EEEESSCHHHHHHHHHHCTTGGGCC--SEEEECTTSHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEEEEECTTB
T ss_pred EEEECCCHHHHHHHHHHcCcccCCc--eeEEECCchHHHHHhCCccCCC--C---ceeeEEEEECCCCeEEEEEecCCCC
Confidence 999999999999999999 786 9999999999999999975321 2 2468999999 99999999986432
Q ss_pred CcccCCHHHHHhc
Q 028808 190 KMKVSGGDVILGQ 202 (203)
Q Consensus 190 ~~~~~~a~~vL~~ 202 (203)
..+++++++.
T Consensus 141 ---~~~~~~l~~~ 150 (186)
T 1n8j_A 141 ---GRDASDLLRK 150 (186)
T ss_dssp ---CCCHHHHHHH
T ss_pred ---CCCHHHHHHH
Confidence 1356666654
No 34
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.95 E-value=6.7e-28 Score=194.94 Aligned_cols=147 Identities=19% Similarity=0.300 Sum_probs=120.3
Q ss_pred cccccCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc
Q 028808 32 YASVAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
...+++|++ ||+|++++. +| ++++++|++ ++||++||+|||++|||+|..| ++.|++++++|+++
T Consensus 3 ~~~~~~G~~----aP~f~l~~~~~~g-------~~~~v~l~~-~~gk~vvl~F~~~~~C~~C~~~-~~~l~~l~~~~~~~ 69 (202)
T 1uul_A 3 CGEAEDLHP----APDFNETALMPNG-------TFKKVALTS-YKGKWLVLFFYPMDFTFVCPTE-ICQFSDRVKEFSDI 69 (202)
T ss_dssp -CCCCTTSB----CCCCEEEEECTTS-------CEEEEEGGG-GTTSEEEEEECSCTTCSHHHHH-HHHHHHTHHHHHTT
T ss_pred cccccCCCc----CCCcEeeeeecCC-------CccEEEHHH-hCCCeEEEEEECCCCCCcCHHH-HHHHHHHHHHHHHC
Confidence 356889999 699999987 43 127899999 4998655554449999999999 99999999999999
Q ss_pred CCcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEE
Q 028808 110 GIDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKA 181 (203)
Q Consensus 110 gv~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~ 181 (203)
|++ ||+||.|+++.+++|++++ +++ ||+++|.+++++++||+..... | ...|++|||| +|+|++
T Consensus 70 ~v~-vi~Is~D~~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~ygv~~~~~--g---~~~P~~~lid~~G~i~~ 141 (202)
T 1uul_A 70 GCE-VLACSMDSEYSHLAWTSIERKRGGLGQMN--IPILADKTKCIMKSYGVLKEED--G---VAYRGLFIIDPKQNLRQ 141 (202)
T ss_dssp TEE-EEEEESSCHHHHHHHHHSCGGGTCCCSCS--SCEEECTTCHHHHHHTCEETTT--T---EECEEEEEECTTSBEEE
T ss_pred CCE-EEEEeCCCHHHHHHHHHHHHhhCCCCCCc--eeEEECCchHHHHHcCCccCCC--C---ceeeEEEEECCCCEEEE
Confidence 998 9999999999999999998 675 9999999999999999975321 2 2468999999 999999
Q ss_pred EEeecCCCCcccCCHHHHHhc
Q 028808 182 LNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 182 ~~~~~~~~~~~~~~a~~vL~~ 202 (203)
++++..+.+ .+.+++++.
T Consensus 142 ~~~g~~~~~---~~~~ell~~ 159 (202)
T 1uul_A 142 ITVNDLPVG---RDVDEALRL 159 (202)
T ss_dssp EEEECTTBC---CCHHHHHHH
T ss_pred EEeCCCCCC---CCHHHHHHH
Confidence 998865432 355555543
No 35
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.95 E-value=3.2e-28 Score=189.04 Aligned_cols=132 Identities=20% Similarity=0.239 Sum_probs=113.5
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCC--eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGK--KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk--~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
...+++|++ +|+|++++.+| ++++|+++ +|| ++||+|||++|||+|..| +|.|++++++|+++
T Consensus 4 ~~~~~~G~~----~P~f~l~~~~G---------~~v~l~~~-~gk~~~vvl~f~~~~~c~~C~~~-~~~l~~~~~~~~~~ 68 (159)
T 2a4v_A 4 VNELEIGDP----IPDLSLLNEDN---------DSISLKKI-TENNRVVVFFVYPRASTPGSTRQ-ASGFRDNYQELKEY 68 (159)
T ss_dssp TTCCCTTCB----CCSCEEECTTS---------CEEEHHHH-HHHCSEEEEEECSSSSSHHHHHH-HHHHHHHHHHHTTT
T ss_pred CCcCCCCCC----CCCeEEECCCC---------CEEeHHHH-hCCCCeEEEEEcCCCCCCCHHHH-HHHHHHHHHHHHhC
Confidence 346889999 69999999876 89999995 776 566665679999999999 99999999999999
Q ss_pred CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeecC
Q 028808 110 GIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEA 187 (203)
Q Consensus 110 gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~ 187 (203)
| + |++||.|+++.+++|+++++++ ||+++|++++++++||+..... .| ..|++|||.+|+|++++.+..
T Consensus 69 ~-~-vv~is~d~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~p~-~g----~~~~~~li~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 69 A-A-VFGLSADSVTSQKKFQSKQNLP--YHLLSDPKREFIGLLGAKKTPL-SG----SIRSHFIFVDGKLKFKRVKIS 137 (159)
T ss_dssp C-E-EEEEESCCHHHHHHHHHHHTCS--SEEEECTTCHHHHHHTCBSSSS-SC----BCCEEEEEETTEEEEEEESCC
T ss_pred C-c-EEEEeCCCHHHHHHHHHHhCCC--ceEEECCccHHHHHhCCccccc-CC----ccceEEEEcCCEEEEEEccCC
Confidence 9 7 9999999999999999999996 9999999999999999976421 11 357788888999999998753
No 36
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.95 E-value=8.6e-28 Score=196.94 Aligned_cols=147 Identities=19% Similarity=0.305 Sum_probs=120.0
Q ss_pred cccccCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc
Q 028808 32 YASVAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
...+++|++ ||+|++++. +| ++++++|+++++||++||+|+|++|||+|..| ++.|++++++|+++
T Consensus 18 ~~~l~~G~~----aP~f~l~~~~~~G-------~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~-~~~l~~l~~~~~~~ 85 (213)
T 2i81_A 18 GSPTYVGKE----APFFKAEAVFGDN-------SFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSE-IIALDKALDAFHER 85 (213)
T ss_dssp --CCCBTSB----CCCCEEEEECTTS-------CEEEEEGGGGTTTCEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHHT
T ss_pred CccccCCCc----CCCeEeeccccCC-------ceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHH-HHHHHHHHHHHHHC
Confidence 346889999 699999987 43 23689999943999765555459999999999 99999999999999
Q ss_pred CCcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEE
Q 028808 110 GIDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKA 181 (203)
Q Consensus 110 gv~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~ 181 (203)
|++ ||+||.|+++.+++|++++ +++ ||+++|++++++++||+..+ .| ...|++|||| +|+|++
T Consensus 86 ~v~-vv~Is~D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~~~---~g---~~~p~~~lID~~G~i~~ 156 (213)
T 2i81_A 86 NVE-LLGCSVDSKYTHLAWKKTPLAKGGIGNIK--HTLLSDITKSISKDYNVLFD---DS---VSLRAFVLIDMNGIVQH 156 (213)
T ss_dssp TEE-EEEEESSCHHHHHHHHSSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEET---TT---EECEEEEEECTTSBEEE
T ss_pred CCE-EEEEeCCCHHHHHHHHHHHHhhCCccCCC--ceEEECCchHHHHHhCCccc---cC---CcccEEEEECCCCEEEE
Confidence 998 9999999999999999988 675 99999999999999999751 12 2468999999 999999
Q ss_pred EEeecCCCCcccCCHHHHHhc
Q 028808 182 LNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 182 ~~~~~~~~~~~~~~a~~vL~~ 202 (203)
+++++.+.+ .+.+++++.
T Consensus 157 ~~~~~~~~~---~~~~ell~~ 174 (213)
T 2i81_A 157 LLVNNLAIG---RSVDEILRI 174 (213)
T ss_dssp EEEECTTCC---CCHHHHHHH
T ss_pred EEecCCCCC---CCHHHHHHH
Confidence 998865432 355555543
No 37
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.95 E-value=4e-27 Score=187.62 Aligned_cols=134 Identities=19% Similarity=0.356 Sum_probs=112.9
Q ss_pred ccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEee-CCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 35 VAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLP-GAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~-~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
+++|++ ||+|++++.+|.. ++++++|++ ++||++| ++|| ++|||+|..+ ++.|++++++|+++|++
T Consensus 1 ~~~G~~----~P~f~l~~~~g~~-----~~~~~~l~~-~~gk~vv-l~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v~- 67 (187)
T 1we0_A 1 SLIGTE----VQPFRAQAFQSGK-----DFFEVTEAD-LKGKWSI-VVFYPADFSFVCPTE-LEDVQKEYAELKKLGVE- 67 (187)
T ss_dssp CCTTCB----CCCCEEEEECSSS-----CCEEEETTT-TSSSEEE-EEECSCTTCSSCTHH-HHHHHHHHHHHHHTTEE-
T ss_pred CCCCCc----CCCeEEeccCCCc-----cceEecHHH-HCCCCEE-EEEECCCCCcchHHH-HHHHHHHHHHHHHcCCE-
Confidence 467888 6999999987600 113999999 5998554 5566 9999999999 99999999999999998
Q ss_pred EEEEecCCHHHHHHHHHHh----CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCC
Q 028808 114 VICVAVNDPYVMNGWAEKL----QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAP 188 (203)
Q Consensus 114 vi~IS~d~~~~~~~~~~~~----~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~ 188 (203)
|++||.|+++.+++|++++ +++ ||+++|.+.+++++||+..... | ...|++|||| +|+|++++.+..+
T Consensus 68 vv~vs~d~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~~--g---~~~P~~~lid~~G~i~~~~~g~~~ 140 (187)
T 1we0_A 68 VYSVSTDTHFVHKAWHENSPAVGSIE--YIMIGDPSQTISRQFDVLNEET--G---LADRGTFIIDPDGVIQAIEINADG 140 (187)
T ss_dssp EEEEESSCHHHHHHHHHSCHHHHTCC--SEEEECTTCHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEEEEECTT
T ss_pred EEEEECCCHHHHHHHHHHhccccCCC--ceEEECCchHHHHHhCCCcCCC--C---ceeeEEEEECCCCeEEEEEecCCC
Confidence 9999999999999999998 786 9999999999999999975321 1 1468999999 9999999998654
No 38
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.95 E-value=1.5e-27 Score=184.54 Aligned_cols=142 Identities=18% Similarity=0.402 Sum_probs=118.3
Q ss_pred ccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCC-eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 35 VAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGK-KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk-~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
+++|++ ||+|++.+.+| +.++|++ ++|| ++||.|||++|||+|..+ ++.|++++++|+++|++
T Consensus 9 ~~~G~~----~p~f~l~~~~G---------~~~~l~~-~~gk~~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~~~- 72 (160)
T 1xvw_A 9 LNVGAT----APDFTLRDQNQ---------QLVTLRG-YRGAKNVLLVFFPLAFTGICQGE-LDQLRDHLPEFENDDSA- 72 (160)
T ss_dssp CCTTSB----CCCCEEECTTS---------CEEEGGG-GTTTCEEEEEECSCTTSSHHHHH-HHHHHHTGGGTSSSSEE-
T ss_pred CCCCCC----CCCeEeEcCCC---------CEEeHHH-hcCCCCEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCCcE-
Confidence 899999 69999999876 8999999 5998 666655569999999999 99999999999988998
Q ss_pred EEEEecCCHHHHHHHHHHhCCCCceEEEeeC--CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCC
Q 028808 114 VICVAVNDPYVMNGWAEKLQAKDVIEFYGDF--DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSK 190 (203)
Q Consensus 114 vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~--~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~ 190 (203)
|++||.|+++.+++|+++++++ ||+++|. ++++++.||+..... |+ ..|++|||| +|+|++++.+....
T Consensus 73 vv~is~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~~~~~--~~---p~~~~~lid~~G~i~~~~~g~~~~- 144 (160)
T 1xvw_A 73 ALAISVGPPPTHKIWATQSGFT--FPLLSDFWPHGAVSQAYGVFNEQA--GI---ANRGTFVVDRSGIIRFAEMKQPGE- 144 (160)
T ss_dssp EEEEESCCHHHHHHHHHHHTCC--SCEEECTTTTTHHHHHTTCEETTT--TE---ECSEEEEECTTSBEEEEEECCTTC-
T ss_pred EEEEeCCCHHHHHHHHHhcCCC--ceEEecCCcChHHHHHcCCccccC--CC---eeeeEEEECCCCeEEEEEecCCCC-
Confidence 9999999999999999999996 9999995 999999999974311 11 234899999 99999999886332
Q ss_pred cccCCHHHHHhc
Q 028808 191 MKVSGGDVILGQ 202 (203)
Q Consensus 191 ~~~~~a~~vL~~ 202 (203)
..+.+++++.
T Consensus 145 --~~~~~~l~~~ 154 (160)
T 1xvw_A 145 --VRDQRLWTDA 154 (160)
T ss_dssp --CCCHHHHHHH
T ss_pred --CCCHHHHHHH
Confidence 3355665543
No 39
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.95 E-value=2.4e-27 Score=195.00 Aligned_cols=146 Identities=21% Similarity=0.314 Sum_probs=118.1
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ ||+|++++..+ .+| ++++|++ ++||++||+|||++|||+|..| ++.|++++++|+++|++
T Consensus 25 ~~l~~G~~----aP~f~l~~~~~-~~g-----~~v~l~d-~~Gk~vll~F~pa~~Cp~C~~~-~~~l~~l~~~~~~~~v~ 92 (220)
T 1zye_A 25 PAPAVTQH----APYFKGTAVVS-GEF-----KEISLDD-FKGKYLVLFFYPLDFTFVCPTE-IIAFSDKASEFHDVNCE 92 (220)
T ss_dssp --CCTTSB----CCCCEEEEECS-SSE-----EEEEGGG-GTTSEEEEEECSCTTCSSSHHH-HHHHHHHHHHHHHTTEE
T ss_pred CcccCCCC----CCCcEEEeeeC-CCC-----cEEEHHH-hCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCCE
Confidence 35889999 69999986531 123 8999999 5998666555559999999999 99999999999999998
Q ss_pred EEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEe
Q 028808 113 SVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
||+||.|+.+.+++|++++ +++ ||+++|.+.+++++||+..... | ...|++|||| +|+|+++++
T Consensus 93 -vv~Is~D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~i~~~ygv~~~~~--g---~~~P~~~liD~~G~I~~~~~ 164 (220)
T 1zye_A 93 -VVAVSVDSHFSHLAWINTPRKNGGLGHMN--IALLSDLTKQISRDYGVLLEGP--G---LALRGLFIIDPNGVIKHLSV 164 (220)
T ss_dssp -EEEEESSCHHHHHHHHTSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEEEE
T ss_pred -EEEEECCCHHHHHHHHHHHHHhCCCcCCc--eEEEECCcHHHHHHhCCeecCC--C---cccceEEEECCCCEEEEEEe
Confidence 9999999999999999987 665 9999999999999999975322 2 2468999999 999999998
Q ss_pred ecCCCCcccCCHHHHHh
Q 028808 185 EEAPSKMKVSGGDVILG 201 (203)
Q Consensus 185 ~~~~~~~~~~~a~~vL~ 201 (203)
++.+.+ .+.+++++
T Consensus 165 g~~~~~---~~~~ell~ 178 (220)
T 1zye_A 165 NDLPVG---RSVEETLR 178 (220)
T ss_dssp ECTTCC---CCHHHHHH
T ss_pred cCCCCC---CCHHHHHH
Confidence 864432 34455544
No 40
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.95 E-value=2.8e-27 Score=189.43 Aligned_cols=142 Identities=19% Similarity=0.328 Sum_probs=115.9
Q ss_pred cCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 36 AVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 36 ~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
++|++ ||+|++++. +| .+++++|+++++||++||+|+|++|||+|..+ ++.|++++++|+++|++
T Consensus 1 ~~G~~----aP~f~l~~~~~~G-------~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v~- 67 (192)
T 2h01_A 1 AFQGQ----APSFKAEAVFGDN-------TFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSE-IIALDKALDSFKERNVE- 67 (192)
T ss_dssp CCSSB----CCCCEEEEECTTS-------CEEEEEGGGGTTTCEEEEEECSCSSCSSCCHH-HHHHHHTHHHHHHTTEE-
T ss_pred CCCCc----CCCcEeEeeecCC-------ceeEEeHHHHcCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCCE-
Confidence 46888 699999987 53 12689999943998655554449999999999 99999999999999998
Q ss_pred EEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 114 VICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 114 vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
||+||.|+++.+++|++++ +++ ||+++|.+++++++||+..+ .| ...|++|||| +|+|++++++
T Consensus 68 vv~Is~d~~~~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~---~g---~~~P~~~liD~~G~i~~~~~g 139 (192)
T 2h01_A 68 LLGCSVDSKFTHLAWKKTPLSQGGIGNIK--HTLISDISKSIARSYDVLFN---ES---VALRAFVLIDKQGVVQHLLVN 139 (192)
T ss_dssp EEEEESSCHHHHHHHHTSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEET---TT---EECCEEEEECTTSBEEEEEEG
T ss_pred EEEEEeCCHHHHHHHHHhHHhhCCccCCC--cCeEECCcHHHHHHhCCcCc---CC---ceeeEEEEEcCCCEEEEEEeC
Confidence 9999999999999999988 665 99999999999999999751 12 1468899999 9999999998
Q ss_pred cCCCCcccCCHHHHHh
Q 028808 186 EAPSKMKVSGGDVILG 201 (203)
Q Consensus 186 ~~~~~~~~~~a~~vL~ 201 (203)
+.+.+ .+.+++++
T Consensus 140 ~~~~~---~~~~~l~~ 152 (192)
T 2h01_A 140 NLALG---RSVDEILR 152 (192)
T ss_dssp GGSSG---GGHHHHHH
T ss_pred CCCCC---CCHHHHHH
Confidence 65432 24455544
No 41
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.95 E-value=1.9e-27 Score=191.34 Aligned_cols=146 Identities=20% Similarity=0.319 Sum_probs=119.4
Q ss_pred ccccCCCccccCCCceEEecc-ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 33 ASVAVGSDIVSAAQDVSLQKA-RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~-~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
..+++|++ ||+|++++. +| +| ++++|++ ++||++||+|||++|||+|..+ ++.|++++++|+++|+
T Consensus 3 ~~l~~G~~----aP~f~l~~~~~g--~~-----~~v~l~~-~~gk~vvl~F~~a~~C~~C~~~-~~~l~~l~~~~~~~~v 69 (197)
T 1qmv_A 3 GNARIGKP----APDFKATAVVDG--AF-----KEVKLSD-YKGKYVVLFFYPLDFTFVAPTE-IIAFSNRAEDFRKLGC 69 (197)
T ss_dssp TTBCTTSB----CCCCEEEEEETT--EE-----EEEEGGG-GTTSEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHTTTE
T ss_pred CcccCCCC----CCCeEeEeecCC--Cc-----cEEEHHH-HCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCC
Confidence 45789999 699999987 43 12 7899999 5998655544449999999999 9999999999999999
Q ss_pred cEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEE
Q 028808 112 DSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALN 183 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~ 183 (203)
+ ||+||.|+.+.+++|++++ +++ ||+++|.+++++++||+..... | ...|++|||| +|+|++++
T Consensus 70 ~-vv~Is~d~~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~~gv~~~~~--~---~~~P~~~lid~~G~i~~~~ 141 (197)
T 1qmv_A 70 E-VLGVSVDSQFTHLAWINTPRKEGGLGPLN--IPLLADVTRRLSEDYGVLKTDE--G---IAYRGLFIIDGKGVLRQIT 141 (197)
T ss_dssp E-EEEEESSCHHHHHHHHTSCGGGTCCCSCS--SCEEECTTCHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEEE
T ss_pred E-EEEEECCCHHHHHHHHHHHHhhCCCCCCc--eEEEECCcHHHHHHcCCccCCC--C---ceeeEEEEECCCCcEEEEE
Confidence 8 9999999999999999987 675 9999999999999999975321 1 2468999999 99999999
Q ss_pred eecCCCCcccCCHHHHHhc
Q 028808 184 VEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 184 ~~~~~~~~~~~~a~~vL~~ 202 (203)
++..+.+ .+.+++++.
T Consensus 142 ~g~~~~~---~~~~e~l~~ 157 (197)
T 1qmv_A 142 VNDLPVG---RSVDEALRL 157 (197)
T ss_dssp EECTTBC---CCHHHHHHH
T ss_pred eCCCCCC---CCHHHHHHH
Confidence 9875432 355555543
No 42
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.94 E-value=5.4e-27 Score=193.04 Aligned_cols=146 Identities=17% Similarity=0.286 Sum_probs=119.6
Q ss_pred cccccCCCccccCCCceEEecc-ccccCCCCCCceeeecccccCCCeEEEEEee-CCCCCCCCccchhhHHHhHHHHHHc
Q 028808 32 YASVAVGSDIVSAAQDVSLQKA-RTWDEGVSSNFATTPIKDIFKGKKVVIFGLP-GAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~-~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~-~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
.+.+++|++ ||+|+|++. +| +| ++++|++ ++||+ ||++|| ++|||+|..| +|.|++++++|+++
T Consensus 37 ~~~l~~G~~----aP~f~l~~~~d~--~G-----~~v~l~~-~~Gk~-vll~F~a~~wC~~C~~~-~p~l~~l~~~~~~~ 102 (222)
T 3ztl_A 37 TMVLLPNRP----APEFKGQAVING--EF-----KEICLKD-YRGKY-VVLFFYPADFTFVCPTE-IIAFSDQVEEFNSR 102 (222)
T ss_dssp ---CCSSEE----CCCCEEEEEETT--EE-----EEEEGGG-GTTSE-EEEEECSCSSCSHHHHH-HHHHHHTHHHHHTT
T ss_pred cccccCCCC----CCCeEEecccCC--CC-----cEEeHHH-hCCCe-EEEEEECCCCCCchHHH-HHHHHHHHHHHHHC
Confidence 357899999 699999966 42 23 8999999 49985 566677 5999999999 99999999999999
Q ss_pred CCcEEEEEecCCHHHHHHHHHHh-------CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEE
Q 028808 110 GIDSVICVAVNDPYVMNGWAEKL-------QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKA 181 (203)
Q Consensus 110 gv~~vi~IS~d~~~~~~~~~~~~-------~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~ 181 (203)
|++ ||+||.|+++..++|++++ +++ ||+++|.+++++++||+..... | ...|++|||| +|+|++
T Consensus 103 ~v~-vv~Is~D~~~~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~ygv~~~~~--g---~~~P~~~lID~~G~I~~ 174 (222)
T 3ztl_A 103 NCQ-VIACSTDSQYSHLAWDNLDRKSGGLGHMK--IPLLADRKQEISKAYGVFDEED--G---NAFRGLFIIDPNGILRQ 174 (222)
T ss_dssp TEE-EEEEESSCHHHHHHHHHSCGGGTSCCSCS--SCEEECSSSHHHHHTTCBCTTT--S---SBCEEEEEECTTSEEEE
T ss_pred CCE-EEEEECCCHHHHHHHHHHhhhhccccccc--eeEEeCCchHHHHHcCCeecCC--C---CccceEEEECCCCeEEE
Confidence 998 9999999999999999987 775 9999999999999999975431 2 2468999999 999999
Q ss_pred EEeecCCCCcccCCHHHHHhc
Q 028808 182 LNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 182 ~~~~~~~~~~~~~~a~~vL~~ 202 (203)
++.+..+. ...++++|+.
T Consensus 175 ~~~g~~~~---~~~~~~il~~ 192 (222)
T 3ztl_A 175 ITINDKPV---GRSVDETLRL 192 (222)
T ss_dssp EEEECTTB---CCCHHHHHHH
T ss_pred EEecCCCC---CCCHHHHHHH
Confidence 99987543 2346666654
No 43
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.94 E-value=9.5e-27 Score=187.19 Aligned_cols=140 Identities=17% Similarity=0.276 Sum_probs=116.3
Q ss_pred ccCCCccccCCCceEEecc--ccccCCCCCCce---eeecccccCCCeEEEEEee-CCCCCCCCccchhhHHHhHHHHHH
Q 028808 35 VAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFA---TTPIKDIFKGKKVVIFGLP-GAYTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~---~vsL~dl~~gk~vVL~~f~-~~~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
+++|++ ||+|++++. +| + +++|+++++||++ |++|| ++|||+|..+ +|.|++++++|++
T Consensus 1 ~~~G~~----~P~f~l~~~~~~G---------~~~~~v~l~~~~~gk~v-vl~F~~a~~C~~C~~~-~~~l~~l~~~~~~ 65 (198)
T 1zof_A 1 MVVTKL----APDFKAPAVLGNN---------EVDEHFELSKNLGKNGV-ILFFWPKDFTFVCPTE-IIAFDKRVKDFHE 65 (198)
T ss_dssp CCTTSB----CCCCEEEEECTTS---------CEEEEEETTTSCCSSEE-EEEECSCTTCSSCCTH-HHHHHHTHHHHHH
T ss_pred CCCCCc----CCceEeecccCCC---------cccceEEHHHHhCCCcE-EEEEECCCCCCchHHH-HHHHHHHHHHHHH
Confidence 467998 699999998 65 7 8999994389855 55566 9999999999 9999999999999
Q ss_pred cCCcEEEEEecCCHHHHHHHHHH-------hCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEE
Q 028808 109 KGIDSVICVAVNDPYVMNGWAEK-------LQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIK 180 (203)
Q Consensus 109 ~gv~~vi~IS~d~~~~~~~~~~~-------~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~ 180 (203)
+|++ |++||.|+++.+++|+++ ++++ ||+++|.+++++++||+.... | ...|++|||| +|+|+
T Consensus 66 ~~v~-vv~Is~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~---g---~~~P~~~lid~~G~i~ 136 (198)
T 1zof_A 66 KGFN-VIGVSIDSEQVHFAWKNTPVEKGGIGQVS--FPMVADITKSISRDYDVLFEE---A---IALRGAFLIDKNMKVR 136 (198)
T ss_dssp TTEE-EEEEESSCHHHHHHHHTSCGGGTCCCCCS--SCEEECTTSHHHHHTTCEETT---T---EECEEEEEEETTTEEE
T ss_pred cCCE-EEEEECCCHHHHHHHHHhhhhcccccCce--eEEEECCchHHHHHhCCcccC---C---cccceEEEECCCCEEE
Confidence 9998 999999999999999998 7775 999999999999999997521 2 2468899999 99999
Q ss_pred EEEeecCCCCcccCCHHHHHh
Q 028808 181 ALNVEEAPSKMKVSGGDVILG 201 (203)
Q Consensus 181 ~~~~~~~~~~~~~~~a~~vL~ 201 (203)
+++.+..+.+ .+++++++
T Consensus 137 ~~~~g~~~~~---~~~~~l~~ 154 (198)
T 1zof_A 137 HAVINDLPLG---RNADEMLR 154 (198)
T ss_dssp EEEEESSSCC---CHHHHHHH
T ss_pred EEEecCCCCC---CCHHHHHH
Confidence 9998854322 34555544
No 44
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.94 E-value=5.3e-27 Score=192.27 Aligned_cols=126 Identities=11% Similarity=0.106 Sum_probs=113.7
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
...+++|++ ||+|++++.+| ++++|++ ++||++||++||++|||+|..+ +|.|++++++|+++|+
T Consensus 29 ~~~l~~G~~----aP~f~l~~~~G---------~~v~l~~-~~gk~~vll~F~a~~C~~C~~~-~~~l~~l~~~~~~~~v 93 (218)
T 3u5r_E 29 SNSITLGTR----AADFVLPDAGG---------NLFTLAE-FKDSPALLVAFISNRCPFVVLI-REALAKFAGDYAGQGL 93 (218)
T ss_dssp CCCCCTTCB----CCCCCEECTTC---------CEECGGG-GTTCSEEEEEECCSSCHHHHTT-HHHHHHHHHHHTTTTE
T ss_pred CCcCCCCCc----CCCcEeECCCC---------CEEeHHH-hCCCCeEEEEEECCCCccHHHH-HHHHHHHHHHHHhCCc
Confidence 356899999 69999999876 8999999 5999778889999999999999 9999999999999999
Q ss_pred cEEEEEec--------CCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 112 DSVICVAV--------NDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 112 ~~vi~IS~--------d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
+ ||+||. |+++.+++|+++++++ ||+++|.+++++++||+.. .|++|||| +|+|+++
T Consensus 94 ~-vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~~v~~-----------~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 94 A-VVAINSNDAQAFPEETLERVGAEVKAYGYG--FPYLKDASQSVAKAYGAAC-----------TPDFFLYDRERRLVYH 159 (218)
T ss_dssp E-EEEEECSCTTTCGGGSHHHHHHHHHHHTCC--SCEEECTTCHHHHHHTCCE-----------ESEEEEECTTCBEEEE
T ss_pred E-EEEEECCcccccccCCHHHHHHHHHHhCCC--ccEEECCccHHHHHcCCCC-----------CCeEEEECCCCcEEEe
Confidence 8 999999 6778999999999996 9999999999999999863 47899999 9999988
Q ss_pred Eeec
Q 028808 183 NVEE 186 (203)
Q Consensus 183 ~~~~ 186 (203)
...+
T Consensus 160 g~~d 163 (218)
T 3u5r_E 160 GQFD 163 (218)
T ss_dssp ECSS
T ss_pred cccc
Confidence 6543
No 45
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.94 E-value=1.8e-26 Score=185.40 Aligned_cols=151 Identities=13% Similarity=0.222 Sum_probs=120.1
Q ss_pred ccccCCCccccCCCceEEeccccc------cCCCCCCceeeecccccCCCeEEEEEee-CCCCCCCCccchhhHHHhHHH
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTW------DEGVSSNFATTPIKDIFKGKKVVIFGLP-GAYTGVCSNQHVPSYKNNIDK 105 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~------~~G~~~~~~~vsL~dl~~gk~vVL~~f~-~~~cp~C~~ehl~~l~~~~~~ 105 (203)
+.+++|++ ||+|++++.+|+ ..+.++.+++++|++ ++||++ |++|| ++|||+|..+ ++.|++++++
T Consensus 2 ~~l~~G~~----~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~-~~gk~v-vl~F~~a~~C~~C~~~-~~~l~~l~~~ 74 (195)
T 2bmx_A 2 PLLTIGDQ----FPAYQLTALIGGDLSKVDAKQPGDYFTTITSDE-HPGKWR-VVFFWPKDFTFVCPTE-IAAFSKLNDE 74 (195)
T ss_dssp CBCCTTCB----CCCCEEEEECSSCGGGSCCSSGGGGEEEEETTS-STTCEE-EEEECSCTTSCCCHHH-HHHHHHTHHH
T ss_pred CcCCCCCc----CCCcCcccccccccccccccccCCCccEeeHHH-hCCCcE-EEEEEcCCCCCCcHHH-HHHHHHHHHH
Confidence 46889999 699999998620 000001127899999 599855 55566 9999999999 9999999999
Q ss_pred HHHcCCcEEEEEecCCHHHHHHHHHHh----CCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEE
Q 028808 106 FKAKGIDSVICVAVNDPYVMNGWAEKL----QAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIK 180 (203)
Q Consensus 106 f~~~gv~~vi~IS~d~~~~~~~~~~~~----~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~ 180 (203)
|+++|++ ||+||.|+++.+++|++++ +++ ||+++|.+.+++++||+... .| ...|++|||| +|+|+
T Consensus 75 ~~~~~v~-vv~Vs~d~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~---~g---~~~P~~~lid~~G~i~ 145 (195)
T 2bmx_A 75 FEDRDAQ-ILGVSIDSEFAHFQWRAQHNDLKTLP--FPMLSDIKRELSQAAGVLNA---DG---VADRVTFIVDPNNEIQ 145 (195)
T ss_dssp HHTTTEE-EEEEESSCHHHHHHHHHHCTTGGGCC--SCEEECTTSHHHHHHTCBCT---TS---SBCEEEEEECTTSBEE
T ss_pred HHHCCCE-EEEEECCCHHHHHHHHHHhccccCCc--eeEEeCCchHHHHHhCCccc---CC---CccceEEEEcCCCeEE
Confidence 9988998 9999999999999999998 786 99999999999999999753 12 2468899999 99999
Q ss_pred EEEeecCCCCcccCCHHHHHhc
Q 028808 181 ALNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 181 ~~~~~~~~~~~~~~~a~~vL~~ 202 (203)
+++.+..+.. .+++++++.
T Consensus 146 ~~~~g~~~~~---~~~~~l~~~ 164 (195)
T 2bmx_A 146 FVSATAGSVG---RNVDEVLRV 164 (195)
T ss_dssp EEEEECTTCC---CCHHHHHHH
T ss_pred EEEecCCCCC---CCHHHHHHH
Confidence 9999865321 356666554
No 46
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.94 E-value=3.4e-26 Score=180.99 Aligned_cols=146 Identities=18% Similarity=0.292 Sum_probs=115.2
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCC-CCCCCccchhhHHHhHHHHHHcCC
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAY-TGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~-cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
..+++|++ ||+|++++.+| +.++|++ ++||+ +|++||++| ||+|..+ +|.|++++++ .|+
T Consensus 16 ~~l~~G~~----~P~f~l~~~~G---------~~v~l~~-~~gk~-vvl~F~~t~~C~~C~~~-~~~l~~l~~~---~~v 76 (175)
T 1xvq_A 16 ELPAVGSP----APAFTLTGGDL---------GVISSDQ-FRGKS-VLLNIFPSVDTPVCATS-VRTFDERAAA---SGA 76 (175)
T ss_dssp CCCCTTSB----CCCCEEECTTS---------CEEEGGG-GTTSC-EEEEECSCCCSSCCCHH-HHHHHHHHHH---TTC
T ss_pred CCCCcCCc----CCCeEEECCCC---------CEEeHHH-cCCCE-EEEEEEeCCCCchHHHH-HHHHHHHHhh---cCC
Confidence 46889999 69999999876 8999999 49985 566788888 9999999 9999999988 689
Q ss_pred cEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCC
Q 028808 112 DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSK 190 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~ 190 (203)
+ ||+||.|+++.+++|+++++++ +||+++|++.+++++||+...... ..+ ...|++|||| +|+|++++++...
T Consensus 77 ~-vv~Is~D~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~gv~~~~~~-~~g-~~~p~~~lid~~G~I~~~~~g~~~-- 150 (175)
T 1xvq_A 77 T-VLCVSKDLPFAQKRFCGAEGTE-NVMPASAFRDSFGEDYGVTIADGP-MAG-LLARAIVVIGADGNVAYTELVPEI-- 150 (175)
T ss_dssp E-EEEEESSCHHHHTTCC-------CEEEEECTTSSHHHHTTCBBCSST-TTT-SBCSEEEEECTTSBEEEEEECSBT--
T ss_pred E-EEEEECCCHHHHHHHHHHcCCC-CceEeeCCHHHHHHHhCCcccccc-cCC-cccceEEEECCCCeEEEEEECCCc--
Confidence 8 9999999999999999999993 499999999999999999754211 011 3468999999 9999999985432
Q ss_pred cccCCHHHHHhcC
Q 028808 191 MKVSGGDVILGQI 203 (203)
Q Consensus 191 ~~~~~a~~vL~~l 203 (203)
.+..+.+++|++|
T Consensus 151 ~~~~~~~~~l~~l 163 (175)
T 1xvq_A 151 AQEPNYEAALAAL 163 (175)
T ss_dssp TCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 1356788888753
No 47
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.93 E-value=1.4e-26 Score=180.65 Aligned_cols=143 Identities=19% Similarity=0.300 Sum_probs=119.4
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCC-CCCCCccchhhHHHhHHHHHHcCC
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAY-TGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~-cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
+.+++|++ +|+|++++.+| ++++|+++ +|| ++|++||++| ||+|..+ +|.|++++++| .++
T Consensus 16 ~~~~~G~~----~p~f~l~~~~G---------~~~~l~~~-~gk-~~vl~F~~~~~C~~C~~~-~~~l~~l~~~~--~~~ 77 (167)
T 2jsy_A 16 QEVKVGDQ----APDFTVLTNSL---------EEKSLADM-KGK-VTIISVIPSIDTGVCDAQ-TRRFNEEAAKL--GDV 77 (167)
T ss_dssp CCCCTTSC----CCCCEEEBTTC---------CEEEHHHH-TTS-CEEEEECSCSTTSHHHHT-HHHHHHHHHHH--SSC
T ss_pred CccCCCCc----CCceEEECCCC---------CEeeHHHh-CCC-eEEEEEecCCCCCchHHH-HHHHHHHHHHc--CCC
Confidence 46889999 69999999876 89999995 998 4667889998 9999999 99999999999 789
Q ss_pred cEEEEEecCCHHHHHHHHHHhCCCCceEEEee-CCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCC
Q 028808 112 DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGD-FDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPS 189 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD-~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~ 189 (203)
+ +++||.|+++.+++|+++++++ +||+++| .+++++++||+.... .| ...|++|||| +|+|++++.+.+..
T Consensus 78 ~-vv~is~d~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~v~~~~--~g---~~~p~~~lid~~G~i~~~~~g~~~~ 150 (167)
T 2jsy_A 78 N-VYTISADLPFAQARWCGANGID-KVETLSDHRDMSFGEAFGVYIKE--LR---LLARSVFVLDENGKVVYAEYVSEAT 150 (167)
T ss_dssp E-EEEEECSSGGGTSCCGGGSSCT-TEEEEEGGGTCHHHHHTTCBBTT--TC---SBCCEEEEECTTSCEEEEEECSBTT
T ss_pred E-EEEEECCCHHHHHHHHHhcCCC-CceEeeCCchhHHHHHhCCcccc--CC---ceeeEEEEEcCCCcEEEEEecCCcC
Confidence 8 9999999998899999999993 3999999 899999999997532 12 1358899999 99999999876432
Q ss_pred CcccCCHHHHHhc
Q 028808 190 KMKVSGGDVILGQ 202 (203)
Q Consensus 190 ~~~~~~a~~vL~~ 202 (203)
...+.+++++.
T Consensus 151 --~~~~~~~l~~~ 161 (167)
T 2jsy_A 151 --NHPNYEKPIEA 161 (167)
T ss_dssp --SCCCSHHHHHH
T ss_pred --CCCCHHHHHHH
Confidence 23456666654
No 48
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.93 E-value=2.8e-25 Score=173.37 Aligned_cols=137 Identities=13% Similarity=0.174 Sum_probs=112.3
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCC-CCCccchhhHHHhHHHHHHcC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTG-VCSNQHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp-~C~~ehl~~l~~~~~~f~~~g 110 (203)
...+++|++ ||+|++++.+| +.++|++ ++|| +||++||++||| +|..+ ++.|.+++++|+++|
T Consensus 4 ~~~l~~g~~----~p~f~l~~~~G---------~~~~l~~-~~gk-~vll~f~~~~C~~~C~~~-~~~l~~l~~~~~~~~ 67 (174)
T 1xzo_A 4 QIKDPLNYE----VEPFTFQNQDG---------KNVSLES-LKGE-VWLADFIFTNCETICPPM-TAHMTDLQKKLKAEN 67 (174)
T ss_dssp CCCSCCCEE----CCCCEEECTTS---------CEEETGG-GTTC-CEEEEEECSCCSSCCCSH-HHHHHHHHHHHHHTT
T ss_pred CCcCccccc----cCCcEEEcCCC---------CEEehhh-cCCC-EEEEEEEcCCCcchhHHH-HHHHHHHHHHhhhcC
Confidence 346889999 69999999886 8999999 5998 567789999999 99999 999999999999987
Q ss_pred --CcEEEEEecC----CHHHHHHHHHHhCCCCce---EEEeeCCchHHHHcCCc-----cccccccCCCCcceEEEEEe-
Q 028808 111 --IDSVICVAVN----DPYVMNGWAEKLQAKDVI---EFYGDFDGSFHKSLDLG-----KDLSAALLGPRSERWSAYVE- 175 (203)
Q Consensus 111 --v~~vi~IS~d----~~~~~~~~~~~~~l~~~f---pllsD~~~~v~~~yGv~-----~~~~~~g~~~~~~r~tfIId- 175 (203)
++ ||+||.| +++.+++|+++++++ | ++++|++.+++++|++. ......+.+....|++||||
T Consensus 68 ~~~~-vv~is~d~~~d~~~~~~~~~~~~~~~--~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~ 144 (174)
T 1xzo_A 68 IDVR-IISFSVDPENDKPKQLKKFAANYPLS--FDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGP 144 (174)
T ss_dssp CCCE-EEEEESCTTTCCHHHHHHHHTTSCCC--GGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECT
T ss_pred CcEE-EEEEEeCCCCCCHHHHHHHHHHcCCC--CcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECC
Confidence 98 9999997 578899999999986 7 99999999988887641 11000011223457899999
Q ss_pred CCEEEEEEeecC
Q 028808 176 DGRIKALNVEEA 187 (203)
Q Consensus 176 dG~I~~~~~~~~ 187 (203)
+|+|++++.+..
T Consensus 145 ~G~i~~~~~g~~ 156 (174)
T 1xzo_A 145 DGKVLKDYNGVE 156 (174)
T ss_dssp TSEEEEEEESSS
T ss_pred CCeEEEEEcCCC
Confidence 999999998754
No 49
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.93 E-value=1.4e-25 Score=178.83 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=112.6
Q ss_pred cccccCCCccccCCCceEEe-ccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC
Q 028808 32 YASVAVGSDIVSAAQDVSLQ-KARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~-~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g 110 (203)
...+++|++ +|+|+++ +.+| +.++|++ ++||++||++||++|||+|..+ ++.|++++++|+++|
T Consensus 15 ~~~~~~g~~----~p~f~l~~~~~G---------~~~~l~~-~~gk~~vlv~F~a~~C~~C~~~-~~~l~~l~~~~~~~~ 79 (196)
T 2ywi_A 15 SNMFPLGKQ----APPFALTNVIDG---------NVVRLED-VKSDAATVIMFICNHCPFVKHV-QHELVRLANDYMPKG 79 (196)
T ss_dssp CCCCCTTCB----CCCCEEEETTTC---------CEEEHHH-HCCSSEEEEEECCSSCHHHHHH-HHHHHHHHHHHGGGT
T ss_pred ccCCCcCCc----CCceeeeecCCC---------CEEeHHH-hCCCCeEEEEEeCCCCccHHHH-HHHHHHHHHHHHhCC
Confidence 456889999 6999999 8876 8999999 5998667888999999999999 999999999999999
Q ss_pred CcEEEEEec--------CCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEE
Q 028808 111 IDSVICVAV--------NDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKA 181 (203)
Q Consensus 111 v~~vi~IS~--------d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~ 181 (203)
+. +++|+. |+++.+++|+++++++ ||++.|.+.++++.||+.. .|++|||| +|+|++
T Consensus 80 v~-vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~ 145 (196)
T 2ywi_A 80 VS-FVAINSNDAEQYPEDSPENMKKVAEELGYP--FPYLYDETQEVAKAYDAAC-----------TPDFYIFDRDLKCVY 145 (196)
T ss_dssp CE-EEEEECSCTTTCGGGSHHHHHHHHHHHTCC--SCEEECSSCHHHHHHTCCE-----------ESEEEEEETTCBEEE
T ss_pred cE-EEEEECCccccccccCHHHHHHHHHHcCCC--ceEEECCchHHHHHhCCCC-----------CCeEEEEcCCCeEEE
Confidence 98 999998 5678899999999996 9999999999999999853 47799999 999999
Q ss_pred EEeec
Q 028808 182 LNVEE 186 (203)
Q Consensus 182 ~~~~~ 186 (203)
++..+
T Consensus 146 ~~~~~ 150 (196)
T 2ywi_A 146 RGQLD 150 (196)
T ss_dssp EECSS
T ss_pred ccccC
Confidence 97654
No 50
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.93 E-value=1.6e-25 Score=169.34 Aligned_cols=130 Identities=8% Similarity=0.048 Sum_probs=110.5
Q ss_pred cCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHH---hHHHHHHcCCc
Q 028808 36 AVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKN---NIDKFKAKGID 112 (203)
Q Consensus 36 ~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~---~~~~f~~~gv~ 112 (203)
++|++ ||+|++++.+| +.++|++ ++|| +||++||++|||+|..+ +|.|.+ ++++|+++|+.
T Consensus 2 ~~G~~----~p~f~l~~~~g---------~~~~l~~-~~gk-~vll~F~a~~C~~C~~~-~~~l~~~~~l~~~~~~~~~~ 65 (142)
T 3ewl_A 2 NAGMK----AADFTYVTVHG---------DNSRMSR-LKAQ-YTMLFFYDPDCSNCRKF-EKLFAEIPAFVEMVENGTLR 65 (142)
T ss_dssp CTTSB----CCCCEEECTTC---------CEEEGGG-CCCS-EEEEEECCSSCHHHHHH-HHHHHTCHHHHHHHHHTSEE
T ss_pred CCCCc----CCCCEEECCCC---------CEEEhhh-cCCC-EEEEEEECCCCccHHHH-HHHHHHhHHHHHHhccCCeE
Confidence 57888 69999999886 8999999 5998 67778999999999999 999998 99999999998
Q ss_pred EEEEEecC-CHHHHHHHHHHhCCCCceEEEeeCCchHHH--HcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCC
Q 028808 113 SVICVAVN-DPYVMNGWAEKLQAKDVIEFYGDFDGSFHK--SLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAP 188 (203)
Q Consensus 113 ~vi~IS~d-~~~~~~~~~~~~~l~~~fpllsD~~~~v~~--~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~ 188 (203)
+++||.| +....++|.++++++ ||++.|.++.+.+ .||+.. .|++|||| +|+|++..
T Consensus 66 -~v~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~----- 126 (142)
T 3ewl_A 66 -VLAIYPDENREEWATKAVYMPQG--WIVGWNKAGDIRTRQLYDIRA-----------TPTIYLLDGRKRVILKD----- 126 (142)
T ss_dssp -EEEEECSSCHHHHHHHHTTSCTT--CEEEECTTCHHHHTTCSCCCS-----------SSEEEEECTTCBEEECS-----
T ss_pred -EEEEEecCCHHHHHHHHHHcCCC--cceeeCCccchhhHHHcCCCC-----------CCeEEEECCCCCEEecC-----
Confidence 9999998 567889999999996 9999999999977 888753 57899999 99999832
Q ss_pred CCcccCCHHHHHhc
Q 028808 189 SKMKVSGGDVILGQ 202 (203)
Q Consensus 189 ~~~~~~~a~~vL~~ 202 (203)
.+.++.++.|++
T Consensus 127 --~~~~~l~~~l~~ 138 (142)
T 3ewl_A 127 --TSMEQLIDYLAT 138 (142)
T ss_dssp --CCHHHHHHHHHC
T ss_pred --CCHHHHHHHHHH
Confidence 234556666654
No 51
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.92 E-value=7.9e-25 Score=167.06 Aligned_cols=124 Identities=21% Similarity=0.298 Sum_probs=110.4
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
|++++|++ ||+|++++ +| +.++|++ ++|| ++|++||++|||+|..+ ++.|.+++++|+++|+.
T Consensus 1 m~l~~G~~----~P~f~l~~-~g---------~~~~l~~-~~gk-~vll~f~~~~C~~C~~~-~~~l~~l~~~~~~~~~~ 63 (152)
T 3gl3_A 1 MSLDKGDK----APDFALPG-KT---------GVVKLSD-KTGS-VVYLDFWASWCGPCRQS-FPWMNQMQAKYKAKGFQ 63 (152)
T ss_dssp -CCCTTSB----CCCCEEEB-SS---------SEEEGGG-GTTS-EEEEEEECTTCTHHHHH-HHHHHHHHHHHGGGTEE
T ss_pred CCCCCCCc----CCceEeeC-CC---------CeEeHHH-hCCC-EEEEEEECCcCHHHHHH-HHHHHHHHHHhhcCCeE
Confidence 46889999 69999999 75 7899999 4998 56777889999999999 99999999999999998
Q ss_pred EEEEEecC-CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecC
Q 028808 113 SVICVAVN-DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEA 187 (203)
Q Consensus 113 ~vi~IS~d-~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~ 187 (203)
+++|+.| +....++|.++++++ |+++.|.+.++++.||+.. .|++|||| +|+|++.+.+..
T Consensus 64 -~v~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~~ 126 (152)
T 3gl3_A 64 -VVAVNLDAKTGDAMKFLAQVPAE--FTVAFDPKGQTPRLYGVKG-----------MPTSFLIDRNGKVLLQHVGFR 126 (152)
T ss_dssp -EEEEECCSSHHHHHHHHHHSCCC--SEEEECTTCHHHHHTTCCS-----------SSEEEEECTTSBEEEEEESCC
T ss_pred -EEEEECCCCHHHHHHHHHHcCCC--CceeECCcchhHHHcCCCC-----------CCeEEEECCCCCEEEEEccCC
Confidence 9999998 567889999999996 9999999999999999853 47789999 999999998754
No 52
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.92 E-value=4.7e-25 Score=169.26 Aligned_cols=122 Identities=20% Similarity=0.180 Sum_probs=108.6
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
|.+++|++ +|+|++.+.+| +.++|++ ++|| ++|++||++|||+|..+ +|.|++++++|+++|+.
T Consensus 1 m~l~~g~~----~p~f~l~~~~G---------~~~~l~~-~~gk-~vll~F~a~~C~~C~~~-~~~l~~l~~~~~~~~~~ 64 (152)
T 2lrn_A 1 MSLATGSV----APAITGIDLKG---------NSVSLND-FKGK-YVLVDFWFAGCSWCRKE-TPYLLKTYNAFKDKGFT 64 (152)
T ss_dssp CCSCTTEE----CCCCEEECSSS---------CEEESGG-GTTS-EEEEEEECTTCTTHHHH-HHHHHHHHHHHTTTTEE
T ss_pred CCccCCCc----CCCceeEcCCC---------CEEeHHH-cCCC-EEEEEEECCCChhHHHH-HHHHHHHHHHhccCCeE
Confidence 45789999 69999999876 8999999 4998 56778899999999999 99999999999998998
Q ss_pred EEEEEecCC-HHHHHHHHHHhCCCCceEEEeeC---CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEe
Q 028808 113 SVICVAVND-PYVMNGWAEKLQAKDVIEFYGDF---DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 113 ~vi~IS~d~-~~~~~~~~~~~~l~~~fpllsD~---~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
+++|+.|+ ....++|.++++++ ||+++|. +.++++.||+.. .|++|||| +|+|++.++
T Consensus 65 -vv~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~ 127 (152)
T 2lrn_A 65 -IYGVSTDRREEDWKKAIEEDKSY--WNQVLLQKDDVKDVLESYCIVG-----------FPHIILVDPEGKIVAKEL 127 (152)
T ss_dssp -EEEEECCSCHHHHHHHHHHHTCC--SEEEEECHHHHHHHHHHTTCCS-----------SCEEEEECTTSEEEEECC
T ss_pred -EEEEEccCCHHHHHHHHHHhCCC--CeEEecccchhHHHHHHhCCCc-----------CCeEEEECCCCeEEEeeC
Confidence 99999985 57889999999996 9999999 789999999853 47899999 999999975
No 53
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.92 E-value=3.1e-26 Score=174.21 Aligned_cols=133 Identities=17% Similarity=0.208 Sum_probs=109.2
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ ||+|++ +.+| +.++|++ ++|| +||++||++|||+|..+ +|.|++++++|+++|+.
T Consensus 5 ~~l~~G~~----~P~f~l-~~~g---------~~~~l~~-~~gk-~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~ 67 (143)
T 4fo5_A 5 EGVNPGDL----APRIEF-LGND---------AKASFHN-QLGR-YTLLNFWAAYDAESRAR-NVQLANEVNKFGPDKIA 67 (143)
T ss_dssp BSSSTTSB----CCCCCC---------------CCCSCC-SSCC-EEEEEEECTTCHHHHHH-HHHHHHHHTTSCTTTEE
T ss_pred cccCCccc----CCceEE-cCCC---------CEEEHHH-hCCC-EEEEEEEcCcCHHHHHH-HHHHHHHHHHhCcCCEE
Confidence 45889999 699999 8775 8999999 5998 67788999999999999 99999999999988998
Q ss_pred EEEEEecC-CHHHHHHHHHHhCCCCce-EEEeeCC---chHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 113 SVICVAVN-DPYVMNGWAEKLQAKDVI-EFYGDFD---GSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 113 ~vi~IS~d-~~~~~~~~~~~~~l~~~f-pllsD~~---~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
|++||.| +....++|.++++++ | ++++|.+ .++++.||+.. .|++|||| +|+|++++++
T Consensus 68 -vv~vs~d~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~~- 132 (143)
T 4fo5_A 68 -MCSISMDEKESIFTETVKIDKLD--LSTQFHEGLGKESELYKKYDLRK-----------GFKNFLINDEGVIIAANVT- 132 (143)
T ss_dssp -EEEEECCSCHHHHHHHHHHHTCC--GGGEEECTTGGGSHHHHHTTGGG-----------CCCEEEECTTSBEEEESCC-
T ss_pred -EEEEEccCCHHHHHHHHHHhCCC--CceeeecccccchHHHHHcCCCC-----------CCcEEEECCCCEEEEccCC-
Confidence 9999999 457889999999997 8 8999984 67899999853 47799999 9999998653
Q ss_pred CCCCcccCCHHHHHhcC
Q 028808 187 APSKMKVSGGDVILGQI 203 (203)
Q Consensus 187 ~~~~~~~~~a~~vL~~l 203 (203)
.++.++.|++|
T Consensus 133 ------~~~l~~~l~~i 143 (143)
T 4fo5_A 133 ------PEKLTEILKAI 143 (143)
T ss_dssp ------HHHHHHHHTC-
T ss_pred ------HHHHHHHHHhC
Confidence 24666666654
No 54
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.92 E-value=3.3e-25 Score=176.60 Aligned_cols=143 Identities=10% Similarity=0.104 Sum_probs=109.9
Q ss_pred ccccccccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHH
Q 028808 25 IPTSSRAYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNID 104 (203)
Q Consensus 25 ~~~~~~~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~ 104 (203)
++.....+..+++|++ +|+|++++.+| ++++|++ ++|| +||++||++|||+|..| +|.|+++++
T Consensus 13 ~~~~~~~~~~~~~g~~----~p~f~l~~~~G---------~~v~l~~-~~Gk-~vlv~F~atwC~~C~~~-~~~l~~l~~ 76 (185)
T 2gs3_A 13 LGTENLYFQSMRCARS----MHEFSAKDIDG---------HMVNLDK-YRGF-VCIVTNVASQGGKTEVN-YTQLVDLHA 76 (185)
T ss_dssp --CCCCSSGGGGGCCC----GGGCEEEBTTS---------CEEEGGG-GTTS-EEEEEEECSSSTTHHHH-HHHHHHHHH
T ss_pred cchhhhhhhhccCCCC----cCCceeEcCCC---------CEeeHHH-cCCC-EEEEEEecCCCCchHHH-HHHHHHHHH
Confidence 4555555677899999 59999999886 8999999 5998 67788999999999999 999999999
Q ss_pred HHHHcCCcEEEEEecC--------CHHHHHHHHHHhCCCCceEEEe--eCCchHHH-HcCCcccccc-cc---CCCCcce
Q 028808 105 KFKAKGIDSVICVAVN--------DPYVMNGWAEKLQAKDVIEFYG--DFDGSFHK-SLDLGKDLSA-AL---LGPRSER 169 (203)
Q Consensus 105 ~f~~~gv~~vi~IS~d--------~~~~~~~~~~~~~l~~~fplls--D~~~~v~~-~yGv~~~~~~-~g---~~~~~~r 169 (203)
+|+++|++ |++||.| +++.+++|+++++++ ||+++ |.+++.++ .|+....... .| ...+..|
T Consensus 77 ~~~~~~v~-vv~is~d~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P 153 (185)
T 2gs3_A 77 RYAECGLR-ILAFPCNQFGKQEPGSNEEIKEFAAGYNVK--FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNF 153 (185)
T ss_dssp HHGGGTEE-EEEEECCTTTTCCCSCHHHHHHHHHHTTCC--SEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSC
T ss_pred HhhcCCeE-EEEEECcccCCCCCCCHHHHHHHHHHcCCC--CeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccc
Confidence 99999998 9999976 367889999999996 99997 56665443 3421110000 01 1122357
Q ss_pred EEEEEe-CCEEEEEEeec
Q 028808 170 WSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 170 ~tfIId-dG~I~~~~~~~ 186 (203)
++|||| +|+|++++.+.
T Consensus 154 ~~~lid~~G~i~~~~~g~ 171 (185)
T 2gs3_A 154 TKFLIDKNGCVVKRYGPM 171 (185)
T ss_dssp CEEEECTTSCEEEEECTT
T ss_pred eEEEECCCCCEEEeeCCC
Confidence 899999 99999998763
No 55
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.92 E-value=7.1e-25 Score=167.66 Aligned_cols=137 Identities=17% Similarity=0.203 Sum_probs=117.1
Q ss_pred ccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEE
Q 028808 35 VAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSV 114 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~v 114 (203)
+++|++ +|+|++.+.+| +.++|++ ++|| ++|++||++|||+|..+ ++.|.+++++|++.++. +
T Consensus 2 ~~~G~~----~p~~~l~~~~g---------~~~~l~~-~~gk-~vll~f~~~~C~~C~~~-~~~l~~~~~~~~~~~~~-~ 64 (154)
T 3kcm_A 2 SLEENP----APDFTLNTLNG---------EVVKLSD-LKGQ-VVIVNFWATWCPPCREE-IPSMMRLNAAMAGKPFR-M 64 (154)
T ss_dssp -CTTSB----CCCCEEECTTS---------CEEEGGG-GTTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHTTTSSEE-E
T ss_pred CCCCCC----CCCeEEEcCCC---------CEEehhh-cCCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHhccCCeE-E
Confidence 578999 69999999876 8999999 4998 56777889999999999 99999999999988998 9
Q ss_pred EEEecCC--HHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCc
Q 028808 115 ICVAVND--PYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKM 191 (203)
Q Consensus 115 i~IS~d~--~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~ 191 (203)
++|+.|. +...++|.++++++ ||++.|.+..+++.||+.. .|++|||| +|+|++.+.+... .
T Consensus 65 v~v~~d~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~~~--~ 129 (154)
T 3kcm_A 65 LCVSIDEGGKVAVEEFFRKTGFT--LPVLLDADKRVGKLYGTTG-----------VPETFVIDRHGVILKKVVGAME--W 129 (154)
T ss_dssp EEEECCTTHHHHHHHHHHHHCCC--CCEEECTTCHHHHHHTCCS-----------BCEEEEECTTSBEEEEEESCCC--T
T ss_pred EEEEcCCcchHHHHHHHHHcCCC--eeEEecCchHHHHHhCCCC-----------CCeEEEECCCCcEEEEEcCCCc--c
Confidence 9999987 67899999999996 9999999999999999853 47899999 9999999987643 2
Q ss_pred ccCCHHHHHhcC
Q 028808 192 KVSGGDVILGQI 203 (203)
Q Consensus 192 ~~~~a~~vL~~l 203 (203)
+.++..+.|++|
T Consensus 130 ~~~~l~~~l~~l 141 (154)
T 3kcm_A 130 DHPEVIAFLNNE 141 (154)
T ss_dssp TSHHHHHHHHTC
T ss_pred ccHHHHHHHHHH
Confidence 344666666554
No 56
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=2.8e-25 Score=170.21 Aligned_cols=122 Identities=19% Similarity=0.212 Sum_probs=109.5
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecc--cccCCCeEEEEEeeCCCCCC--CCccchhhHHHhHHHH-H
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIK--DIFKGKKVVIFGLPGAYTGV--CSNQHVPSYKNNIDKF-K 107 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~--dl~~gk~vVL~~f~~~~cp~--C~~ehl~~l~~~~~~f-~ 107 (203)
..+++|++ ||+|++++.+| +.++|+ + ++|| +||++||++|||+ |..+ +|.|++++++| +
T Consensus 3 ~~l~~G~~----~p~f~l~~~~g---------~~~~l~~~~-~~gk-~vll~F~a~~C~~v~C~~~-~~~l~~l~~~~~~ 66 (150)
T 3fw2_A 3 AKSEIGKY----APFFSLPNAKG---------EKITRSSDA-FKQK-SLLINFWASWNDSISQKQS-NSELREIYKKYKK 66 (150)
T ss_dssp CTTSTTSB----CCCCCEEBTTC---------CEECTTSTT-TTTS-EEEEEEECTTCCCHHHHHH-HHHHHHHHHHHTT
T ss_pred ccccCCCc----CCccEeECCCC---------CEEecchhh-hCCC-EEEEEEEeCCCCchHHHHH-HHHHHHHHHHhcc
Confidence 46889999 69999999886 899999 9 5998 6777899999999 9999 99999999999 8
Q ss_pred HcCCcEEEEEecCCH-HHHHHHHHHhCCCCceEEEeeC---CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 108 AKGIDSVICVAVNDP-YVMNGWAEKLQAKDVIEFYGDF---DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 108 ~~gv~~vi~IS~d~~-~~~~~~~~~~~l~~~fpllsD~---~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
++|+. +++||.|+. +..++|.++++++ ||++.|. +.++++.||+.. .|++|||| +|+|+++
T Consensus 67 ~~~~~-~v~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~ 132 (150)
T 3fw2_A 67 NKYIG-MLGISLDVDKQQWKDAIKRDTLD--WEQVCDFGGLNSEVAKQYSIYK-----------IPANILLSSDGKILAK 132 (150)
T ss_dssp CSSEE-EEEEECCSCHHHHHHHHHHTTCC--SEEECCSCGGGCHHHHHTTCCS-----------SSEEEEECTTSBEEEE
T ss_pred CCCeE-EEEEEcCCCHHHHHHHHHHhCCC--ceEEEcCcccchHHHHHcCCCc-----------cCeEEEECCCCEEEEc
Confidence 88998 999999965 7899999999996 9999999 679999999853 47899999 9999999
Q ss_pred Ee
Q 028808 183 NV 184 (203)
Q Consensus 183 ~~ 184 (203)
+.
T Consensus 133 ~~ 134 (150)
T 3fw2_A 133 NL 134 (150)
T ss_dssp SC
T ss_pred cC
Confidence 85
No 57
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.92 E-value=3.8e-25 Score=168.00 Aligned_cols=131 Identities=9% Similarity=0.056 Sum_probs=111.1
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHH---hHHHHHHcC
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKN---NIDKFKAKG 110 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~---~~~~f~~~g 110 (203)
...+|++ ||+|++++.+| +.++|++ ++|| ++|++||++|||+|..+ +|.|.+ ++++|++.|
T Consensus 4 ~~~~G~~----ap~f~l~~~~g---------~~~~l~~-~~gk-~vll~F~a~wC~~C~~~-~~~l~~~~~l~~~~~~~~ 67 (142)
T 3eur_A 4 KNRLGTK----ALNFTYTLDSG---------VKGTLYQ-FPAE-YTLLFINNPGCHACAEM-IEGLKASPVINGFTAAKK 67 (142)
T ss_dssp TTCTTSB----CCCCEEEETTS---------CEEETTT-CCCS-EEEEEECCSSSHHHHHH-HHHHHHCHHHHHHHHTTS
T ss_pred hhcCCCc----cCCcEEEcCCC---------CEeeHHH-cCCC-EEEEEEECCCCccHHHH-HHHHhhhHHHHHHhccCC
Confidence 4678999 69999999886 8999999 5997 56778999999999999 999999 999999999
Q ss_pred CcEEEEEecCCH-HHHHHHHHHhCCCCceEEEeeCCch--HHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 111 IDSVICVAVNDP-YVMNGWAEKLQAKDVIEFYGDFDGS--FHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 111 v~~vi~IS~d~~-~~~~~~~~~~~l~~~fpllsD~~~~--v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+. |++||.|+. ...++|.++++++ |+.+.|.+.. +++.||+. ..|++|||| +|+|++...+
T Consensus 68 ~~-vi~i~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~~- 132 (142)
T 3eur_A 68 LK-VLSIYPDEELDEWKKHRNDFAKE--WTNGYDKELVIKNKNLYDLR-----------AIPTLYLLDKNKTVLLKDAT- 132 (142)
T ss_dssp EE-EEEEECSSCHHHHHHHGGGSCTT--SEEEECTTCHHHHTTCSCCT-----------TCSEEEEECTTCBEEEEEEC-
T ss_pred eE-EEEEEcCCCHHHHHHHHHhcccc--cccccCccchhhhhhhcCCC-----------cCCeEEEECCCCcEEecCCC-
Confidence 98 999999875 6788899999986 9999999876 67888874 358899999 9999998864
Q ss_pred CCCCcccCCHHHHHh
Q 028808 187 APSKMKVSGGDVILG 201 (203)
Q Consensus 187 ~~~~~~~~~a~~vL~ 201 (203)
.++.++.|+
T Consensus 133 ------~~~l~~~l~ 141 (142)
T 3eur_A 133 ------LQKVEQYLA 141 (142)
T ss_dssp ------HHHHHHHHH
T ss_pred ------HHHHHHHHh
Confidence 245555554
No 58
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.92 E-value=3.8e-25 Score=175.09 Aligned_cols=133 Identities=14% Similarity=0.226 Sum_probs=114.9
Q ss_pred ccccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH
Q 028808 29 SRAYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 29 ~~~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
......+++|++ +|+|++++.+| +.++|++ ++|| ++|++||++|||+|..+ ++.|++++++|++
T Consensus 28 ~~~~~~~~~g~~----~p~f~l~~~~G---------~~~~l~~-~~gk-~vll~F~a~~C~~C~~~-~~~l~~l~~~~~~ 91 (186)
T 1jfu_A 28 VAALTMASAPLK----LPDLAFEDADG---------KPKKLSD-FRGK-TLLVNLWATWCVPCRKE-MPALDELQGKLSG 91 (186)
T ss_dssp GTTCEECCSCCB----CCCCEEECTTS---------CEEEGGG-GTTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHCB
T ss_pred hhhhccccCCCc----CCCcEeEcCCC---------CEeeHHH-cCCC-EEEEEEEeCCCHhHHHH-HHHHHHHHHHhcc
Confidence 444567889999 69999999886 8999999 4998 56778999999999999 9999999999988
Q ss_pred cCCcEEEEEecCCH--HHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 109 KGIDSVICVAVNDP--YVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 109 ~gv~~vi~IS~d~~--~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
.+++ |++|+.|.. +..++|+++++++ +||+++|+++.+.+.||+.... ...|++|||| +|+|++++.+
T Consensus 92 ~~~~-vv~v~~d~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~-------~~~P~~~lid~~G~i~~~~~g 162 (186)
T 1jfu_A 92 PNFE-VVAINIDTRDPEKPKTFLKEANLT-RLGYFNDQKAKVFQDLKAIGRA-------LGMPTSVLVDPQGCEIATIAG 162 (186)
T ss_dssp TTEE-EEEEECCCSCTTHHHHHHHHTTCC-TTCCEECTTCHHHHHHHTTTCC-------SSSSEEEEECTTSBEEEEEES
T ss_pred CCcE-EEEEECCCCCHHHHHHHHHHcCCC-CCceEECCcchHHHHhcccccc-------CCCCEEEEECCCCCEEEEEec
Confidence 8898 999999854 6789999999995 5999999999999999986321 1358899999 9999999987
Q ss_pred c
Q 028808 186 E 186 (203)
Q Consensus 186 ~ 186 (203)
.
T Consensus 163 ~ 163 (186)
T 1jfu_A 163 P 163 (186)
T ss_dssp C
T ss_pred C
Confidence 5
No 59
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.92 E-value=8e-25 Score=165.53 Aligned_cols=134 Identities=17% Similarity=0.138 Sum_probs=115.0
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ ||+|++.+.+| +.+++++ ++|| ++|++||++|||+|..+ +|.|.+++++|+++|+.
T Consensus 3 ~~~~~G~~----~p~~~l~~~~g---------~~~~l~~-~~gk-~vll~f~~~~C~~C~~~-~~~l~~l~~~~~~~~~~ 66 (148)
T 3hcz_A 3 APLLLGKK----APNLYMTDTTG---------TYRYLYD-VQAK-YTILFFWDSQCGHCQQE-TPKLYDWWLKNRAKGIQ 66 (148)
T ss_dssp CCCCTTSB----CCCCCCBCTTS---------CBCCGGG-CCCS-EEEEEEECGGGCTTCSH-HHHHHHHHHHHGGGTEE
T ss_pred CccCCCCc----CCceEEecCCC---------CEEEhHH-cCCC-EEEEEEECCCCccHHHH-HHHHHHHHHHhccCCEE
Confidence 45789999 69999999876 8899999 5998 56778999999999999 99999999999999998
Q ss_pred EEEEEecC-CHHHHHHHHHHhCCCCceEEEeeCCch--HHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCC
Q 028808 113 SVICVAVN-DPYVMNGWAEKLQAKDVIEFYGDFDGS--FHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAP 188 (203)
Q Consensus 113 ~vi~IS~d-~~~~~~~~~~~~~l~~~fpllsD~~~~--v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~ 188 (203)
+++|+.| +....++|.++++++ .|+++.|+++. +++.||+.. .|++|||| +|+|++.+.+.
T Consensus 67 -~v~v~~d~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~i~~-----------~P~~~lid~~G~i~~~~~g~-- 131 (148)
T 3hcz_A 67 -VYAANIERKDEEWLKFIRSKKIG-GWLNVRDSKNHTDFKITYDIYA-----------TPVLYVLDKNKVIIAKRIGY-- 131 (148)
T ss_dssp -EEEEECCSSSHHHHHHHHHHTCT-TSEEEECTTCCCCHHHHHCCCS-----------SCEEEEECTTCBEEEESCCG--
T ss_pred -EEEEEecCCHHHHHHHHHHcCCC-CceEEeccccchhHHHhcCcCC-----------CCEEEEECCCCcEEEecCCH--
Confidence 9999998 557899999999996 69999999988 999999853 47899999 99999987643
Q ss_pred CCcccCCHHHHHhc
Q 028808 189 SKMKVSGGDVILGQ 202 (203)
Q Consensus 189 ~~~~~~~a~~vL~~ 202 (203)
.+.++++++
T Consensus 132 -----~~~~~~l~~ 140 (148)
T 3hcz_A 132 -----ENLDDFLVQ 140 (148)
T ss_dssp -----GGHHHHHHH
T ss_pred -----HHHHHHHHH
Confidence 355555543
No 60
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.91 E-value=1.6e-24 Score=171.34 Aligned_cols=126 Identities=16% Similarity=0.134 Sum_probs=110.5
Q ss_pred cccCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 34 SVAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
....|++ +|+|++++. +| +.++|++ ++|| ++|++||++|||+|..+ ++.|++++++|+++|+
T Consensus 30 ~~~~g~~----~p~f~l~~~~~~g---------~~~~l~~-~~gk-~vlv~F~a~~C~~C~~~-~~~l~~l~~~~~~~~~ 93 (183)
T 3lwa_A 30 DEADRQQ----LPDIGGDSLMEEG---------TQINLSD-FENQ-VVILNAWGQWCAPCRSE-SDDLQIIHEELQAAGN 93 (183)
T ss_dssp CGGGCCC----CCCCEEEBSSSTT---------CEEEGGG-GTTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHHHCC-
T ss_pred ccccCCC----CCceeccccccCC---------cEecHHH-hCCC-EEEEEEECCcCHhHHHH-HHHHHHHHHHHHhcCC
Confidence 5788888 699999999 76 8999999 5998 56778999999999999 9999999999999999
Q ss_pred ------cEEEEEecCC--HHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 112 ------DSVICVAVND--PYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 112 ------~~vi~IS~d~--~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
. +++|+.|+ ++..++|+++++++ ||++.|.++.+.+.||... ....|++|||| +|+|+++
T Consensus 94 ~~~~~v~-~v~v~~d~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~--------v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 94 GDTPGGT-VLGINVRDYSRDIAQDFVTDNGLD--YPSIYDPPFMTAASLGGVP--------ASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp --CCSEE-EEEEECSCCCHHHHHHHHHHTTCC--SCEEECTTCGGGGGTTTCC--------TTCCSEEEEECTTSCEEEE
T ss_pred CccCCcE-EEEEECCCCCHHHHHHHHHHcCCC--ccEEECCcchHHHHhccCC--------CCCCCeEEEECCCCcEEEE
Confidence 8 99999987 78899999999997 9999999999999998532 12468899999 9999999
Q ss_pred Eeec
Q 028808 183 NVEE 186 (203)
Q Consensus 183 ~~~~ 186 (203)
+.+.
T Consensus 163 ~~g~ 166 (183)
T 3lwa_A 163 FLRE 166 (183)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 8754
No 61
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.91 E-value=6.7e-25 Score=168.72 Aligned_cols=120 Identities=13% Similarity=0.225 Sum_probs=105.2
Q ss_pred CCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCc-cchhhHHHhHHHHHHcCCcE
Q 028808 37 VGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSN-QHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 37 ~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~-ehl~~l~~~~~~f~~~gv~~ 113 (203)
.|++ ||+|++++. +| +.++|++ ++|| +||++||++|||+|.. . +|.|++++++|++.|+.
T Consensus 2 ~g~~----aP~f~l~~~~~~g---------~~~~l~~-~~gk-~vlv~f~a~wC~~C~~~~-~~~l~~l~~~~~~~~v~- 64 (158)
T 3eyt_A 2 NAMK----APELQIQQWFNSA---------TDLTLAD-LRGK-VIVIEAFQMLCPGCVMHG-IPLAQKVRAAFPEDKVA- 64 (158)
T ss_dssp CCEE----CCCCCEEEEESCS---------SCCCTGG-GTTS-EEEEEEECTTCHHHHHTH-HHHHHHHHHHSCTTTEE-
T ss_pred CCCc----CCCceehhhhcCC---------CccCHHH-hCCC-EEEEEEECCcCcchhhhh-hHHHHHHHHHhCcCCEE-
Confidence 4677 799999984 33 7899999 5998 6778899999999998 5 79999999999988998
Q ss_pred EEEEec-------CCHHHHHHHHHHhCCCCceEEEeeCCc-----hHHHHcCCccccccccCCCCcceEEEEEe-CCEEE
Q 028808 114 VICVAV-------NDPYVMNGWAEKLQAKDVIEFYGDFDG-----SFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIK 180 (203)
Q Consensus 114 vi~IS~-------d~~~~~~~~~~~~~l~~~fpllsD~~~-----~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~ 180 (203)
+++|+. +++..+++|+++++++ ||++.|.++ ++++.||+.. .|++|||| +|+|+
T Consensus 65 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~ 131 (158)
T 3eyt_A 65 VLGLHTVFEHHEAMTPISLKAFLHEYRIK--FPVGVDQPGDGAMPRTMAAYQMRG-----------TPSLLLIDKAGDLR 131 (158)
T ss_dssp EEEEECCCSCGGGSCHHHHHHHHHHTTCC--SCEEEECCCSSSSCHHHHHTTCCS-----------SSEEEEECTTSEEE
T ss_pred EEEEEecccccccCCHHHHHHHHHHcCCC--ceEEEcCccchhhHHHHHHcCCCC-----------CCEEEEECCCCCEE
Confidence 999995 5788999999999997 999999988 7999999853 47899999 99999
Q ss_pred EEEeec
Q 028808 181 ALNVEE 186 (203)
Q Consensus 181 ~~~~~~ 186 (203)
+++.+.
T Consensus 132 ~~~~g~ 137 (158)
T 3eyt_A 132 AHHFGD 137 (158)
T ss_dssp EEEESC
T ss_pred EEEeCC
Confidence 999864
No 62
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.91 E-value=1.6e-24 Score=168.15 Aligned_cols=128 Identities=10% Similarity=0.156 Sum_probs=103.1
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
.+++|++ +|+|++++.+| ++++|++ ++|| +||++||++|||+|..+ +|.|++++++|+++|++
T Consensus 4 ~~~~g~~----~p~f~l~~~~G---------~~~~l~~-~~gk-~vlv~f~a~~C~~C~~~-~~~l~~l~~~~~~~~~~- 66 (169)
T 2v1m_A 4 SHKSWNS----IYEFTVKDING---------VDVSLEK-YRGH-VCLIVNVACKCGATDKN-YRQLQEMHTRLVGKGLR- 66 (169)
T ss_dssp ---CCCS----GGGCEEEBTTS---------CEEEGGG-GTTS-EEEEEEECSSSTTHHHH-HHHHHHHHHHHGGGTEE-
T ss_pred cccCCcc----cccceeecCCC---------CCccHHH-cCCC-EEEEEEeeccCCchHHH-HHHHHHHHHHhhcCCeE-
Confidence 4678998 59999999986 8999999 5998 67778999999999999 99999999999999998
Q ss_pred EEEEecC--------CHHHHHHH-HHHhCCCCceEEEe--eCCchHHH-Hc--------CCccccccccCCCCcceEEEE
Q 028808 114 VICVAVN--------DPYVMNGW-AEKLQAKDVIEFYG--DFDGSFHK-SL--------DLGKDLSAALLGPRSERWSAY 173 (203)
Q Consensus 114 vi~IS~d--------~~~~~~~~-~~~~~l~~~fplls--D~~~~v~~-~y--------Gv~~~~~~~g~~~~~~r~tfI 173 (203)
|++||.| +++.+++| .++++++ ||+++ |.++..++ .| |+.. ...+..|++||
T Consensus 67 vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~------~~i~~~P~~~l 138 (169)
T 2v1m_A 67 ILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQ--FDMFSKIKVNGSDADDLYKFLKSRQHGTLT------NNIKWNFSKFL 138 (169)
T ss_dssp EEEEECCCSTTCCCSCHHHHHHHHHHHHCCC--SEEBCCCCCSSTTSCHHHHHHHHHSCCSSS------CSCCSTTCEEE
T ss_pred EEEEECCccCCCCCCCHHHHHHHHHHhcCCC--CceEEEEeecCccccHHHHHHHhhcCCccC------CcccccceEEE
Confidence 9999986 35788999 5999996 99997 77776543 23 4321 11223578999
Q ss_pred Ee-CCEEEEEEeec
Q 028808 174 VE-DGRIKALNVEE 186 (203)
Q Consensus 174 Id-dG~I~~~~~~~ 186 (203)
|| +|+|++++.+.
T Consensus 139 id~~G~i~~~~~g~ 152 (169)
T 2v1m_A 139 VDRQGQPVKRYSPT 152 (169)
T ss_dssp ECTTSCEEEEECTT
T ss_pred ECCCCCEEEEcCCC
Confidence 99 99999998764
No 63
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.91 E-value=9.4e-25 Score=173.28 Aligned_cols=136 Identities=9% Similarity=0.075 Sum_probs=107.1
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
..++++|++ +|+|++++.+| ++++|++ ++|| +||++||++|||+|..+ +|.|++++++|+++|+
T Consensus 18 ~~~~~~g~~----~p~f~l~~~~G---------~~~~l~~-~~gk-~vll~F~atwC~~C~~~-~~~l~~l~~~~~~~~v 81 (183)
T 2obi_A 18 RDDWRCARS----MHEFSAKDIDG---------HMVNLDK-YRGF-VCIVTNVASQCGKTEVN-YTQLVDLHARYAECGL 81 (183)
T ss_dssp -CCGGGCCS----GGGCEEEBTTS---------CEEEGGG-GTTS-EEEEEEECSSSTTHHHH-HHHHHHHHHHHGGGTE
T ss_pred ccCCcccCc----ccceEEEcCCC---------CEeeHHH-cCCC-EEEEEEeCCCCCCcHHH-HHHHHHHHHHHhcCCe
Confidence 456899999 59999999886 8999999 5998 57778999999999999 9999999999999999
Q ss_pred cEEEEEecC--------CHHHHHHHHHHhCCCCceEEEe--eCCchHHH-HcCCccccc----cccCCCCcceEEEEEe-
Q 028808 112 DSVICVAVN--------DPYVMNGWAEKLQAKDVIEFYG--DFDGSFHK-SLDLGKDLS----AALLGPRSERWSAYVE- 175 (203)
Q Consensus 112 ~~vi~IS~d--------~~~~~~~~~~~~~l~~~fplls--D~~~~v~~-~yGv~~~~~----~~g~~~~~~r~tfIId- 175 (203)
+ |++||.| +++.+++|+++++++ ||+++ |.++..++ .|+...... ..+...+..|++||||
T Consensus 82 ~-vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~ 158 (183)
T 2obi_A 82 R-ILAFPCNQFGKQEPGSNEEIKEFAAGYNVK--FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK 158 (183)
T ss_dssp E-EEEEECCCSTTCCCSCHHHHHHHHHTTTCC--SEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECT
T ss_pred E-EEEEECCCCCCCCCCCHHHHHHHHHHcCCC--ceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECC
Confidence 8 9999976 567899999999996 99998 77776543 342111000 0011123357899999
Q ss_pred CCEEEEEEeec
Q 028808 176 DGRIKALNVEE 186 (203)
Q Consensus 176 dG~I~~~~~~~ 186 (203)
+|+|++++.+.
T Consensus 159 ~G~i~~~~~g~ 169 (183)
T 2obi_A 159 NGCVVKRYGPM 169 (183)
T ss_dssp TSCEEEEECTT
T ss_pred CCCEEEEeCCC
Confidence 99999998753
No 64
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.91 E-value=3.1e-24 Score=170.29 Aligned_cols=119 Identities=10% Similarity=0.119 Sum_probs=107.1
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ +|+|++++.+| +.++|++ ++|| +||++||++|||+|..+ ++.|++++++|+++ +.
T Consensus 5 ~~~~~g~~----~p~f~l~~~~G---------~~~~l~~-~~gk-~vlv~F~a~~C~~C~~~-~~~l~~l~~~~~~~-~~ 67 (188)
T 2cvb_A 5 PELPLESP----LIDAELPDPRG---------GRYRLSQ-FHEP-LLAVVFMCNHCPYVKGS-IGELVALAERYRGK-VA 67 (188)
T ss_dssp CCCCTTCB----CCCCEEECTTS---------CEEEGGG-CCSS-EEEEEEECSSCHHHHTT-HHHHHHHHHHTTTT-EE
T ss_pred CcCCCCCC----CCCceeecCCC---------CEEeHHH-hCCC-EEEEEEECCCCccHHHH-HHHHHHHHHHhhcC-eE
Confidence 46889999 69999999886 8999999 5998 56778999999999999 99999999999987 88
Q ss_pred EEEEEec--------CCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 113 SVICVAV--------NDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 113 ~vi~IS~--------d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
+++|+. |+...+++|+++++++ ||++.|.+.++++.||+.. .|++|||| +|+|+++
T Consensus 68 -~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 68 -FVGINANDYEKYPEDAPEKMAAFAEEHGIF--FPYLLDETQEVAKAYRALR-----------TPEVFLFDERRLLRYH 132 (188)
T ss_dssp -EEEEECCCTTTCGGGSHHHHHHHHHHHTCC--SCEEECSSSHHHHHTTCCE-----------ESEEEEECTTCBEEEE
T ss_pred -EEEEEcCccccccccCHHHHHHHHHHhCCC--ceEEECCcchHHHHcCCCC-----------CCeEEEECCCCcEEEE
Confidence 999998 5678899999999996 9999999999999999853 47799999 9999998
No 65
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.91 E-value=4.8e-24 Score=162.96 Aligned_cols=121 Identities=19% Similarity=0.386 Sum_probs=106.8
Q ss_pred cCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEE
Q 028808 36 AVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVI 115 (203)
Q Consensus 36 ~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi 115 (203)
++|++ +|+|++.+.+| +.++|+++ +|| ++|++||++|||+|..+ ++.|++++++++++++. ++
T Consensus 1 ~~G~~----~p~~~l~~~~g---------~~~~l~~~-~gk-~vlv~F~~~~C~~C~~~-~~~l~~~~~~~~~~~v~-vv 63 (151)
T 2f9s_A 1 SEGSD----APNFVLEDTNG---------KRIELSDL-KGK-GVFLNFWGTWCEPCKKE-FPYMANQYKHFKSQGVE-IV 63 (151)
T ss_dssp -CCEE----CCCCEEECTTC---------CEEEGGGG-TTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHGGGTEE-EE
T ss_pred CCCCc----CCcceeEcCCC---------CEEEHHHc-CCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHhccCCeE-EE
Confidence 36888 69999999886 89999995 998 56677889999999999 99999999999988998 99
Q ss_pred EEecCC-HHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 116 CVAVND-PYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 116 ~IS~d~-~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+|+.|+ +...++|.++++++ ||++.|.+.++++.||+.. .|++|||| +|+|++.+.+.
T Consensus 64 ~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~G~ 123 (151)
T 2f9s_A 64 AVNVGESKIAVHNFMKSYGVN--FPVVLDTDRQVLDAYDVSP-----------LPTTFLINPEGKVVKVVTGT 123 (151)
T ss_dssp EEEESCCHHHHHHHHHHHTCC--SCEEEETTSHHHHHTTCCS-----------SCEEEEECTTSEEEEEEESC
T ss_pred EEECCCCHHHHHHHHHHcCCC--ceEEECCchHHHHhcCCCC-----------CCeEEEECCCCcEEEEEeCC
Confidence 999964 67899999999996 9999999999999999853 47789999 99999998754
No 66
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.91 E-value=7e-25 Score=174.10 Aligned_cols=132 Identities=12% Similarity=0.194 Sum_probs=98.4
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
...+++|++ +|+|++++.+| ++++|++ ++|| +||++||++|||+|..| +|.|++++++|+++|+
T Consensus 20 ~~~~~~g~~----~p~f~l~~~~G---------~~~~l~~-~~Gk-~vlv~F~atwC~~C~~~-~p~l~~l~~~~~~~~v 83 (181)
T 2p31_A 20 FQSMQQEQD----FYDFKAVNIRG---------KLVSLEK-YRGS-VSLVVNVASECGFTDQH-YRALQQLQRDLGPHHF 83 (181)
T ss_dssp -------CC----GGGCEEEBTTS---------CEEEGGG-GTTS-EEEEEEECSSSTTHHHH-HHHHHHHHHHHGGGTE
T ss_pred cCcCCcCCc----cCceEeecCCC---------CEecHHH-cCCC-EEEEEEeccCCCCcHHH-HHHHHHHHHHhhcCCE
Confidence 356899999 59999999886 8999999 5998 67788999999999999 9999999999999999
Q ss_pred cEEEEEecC--------CHHHHHHHHHH-hCCCCceEEEe--eCCchHHH-H--cCCccccccccCCCCcceEEEEEe-C
Q 028808 112 DSVICVAVN--------DPYVMNGWAEK-LQAKDVIEFYG--DFDGSFHK-S--LDLGKDLSAALLGPRSERWSAYVE-D 176 (203)
Q Consensus 112 ~~vi~IS~d--------~~~~~~~~~~~-~~l~~~fplls--D~~~~v~~-~--yGv~~~~~~~g~~~~~~r~tfIId-d 176 (203)
+ |++||.| +++.+++|+++ ++++ ||+++ |.++..+. . |++.... +. ....+++|||| +
T Consensus 84 ~-vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~--~p~~~~~d~~g~~~~~~~~~~~~~~P---~~-~~~~~~~~lid~~ 156 (181)
T 2p31_A 84 N-VLAFPCNQFGQQEPDSNKEIESFARRTYSVS--FPMFSKIAVTGTGAHPAFKYLAQTSG---KE-PTWNFWKYLVAPD 156 (181)
T ss_dssp E-EEEEECCCSTTCCCSCHHHHHHHHHHHHCCC--SCBBCCCCCSSTTSCHHHHHHHHHHS---CC-CCSTTCEEEECTT
T ss_pred E-EEEEECcCCCCCCCCCHHHHHHHHHhhcCCC--ceeEeecccCCccchhhhhhhhhcCC---Cc-cccceeEEEEcCC
Confidence 8 9999986 56789999999 9996 99996 45554432 2 3222110 00 00011799999 9
Q ss_pred CEEEEEEeec
Q 028808 177 GRIKALNVEE 186 (203)
Q Consensus 177 G~I~~~~~~~ 186 (203)
|+|++++.+.
T Consensus 157 G~i~~~~~g~ 166 (181)
T 2p31_A 157 GKVVGAWDPT 166 (181)
T ss_dssp SCEEEEECTT
T ss_pred CCEEEEeCCC
Confidence 9999998753
No 67
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.91 E-value=1.6e-24 Score=166.70 Aligned_cols=121 Identities=17% Similarity=0.224 Sum_probs=107.1
Q ss_pred cCCCccccCCCceEEec-cccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCc-cchhhHHHhHHHHHHcCCcE
Q 028808 36 AVGSDIVSAAQDVSLQK-ARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSN-QHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 36 ~~G~~~~~~APdf~l~~-~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~-ehl~~l~~~~~~f~~~gv~~ 113 (203)
..|.+ +|+|++++ .+| +.++|++ ++|| +||++||++|||+|.. . +|.|++++++|+++|+.
T Consensus 4 ~~g~~----~p~~~~~~~~~g---------~~~~l~~-~~gk-~vlv~F~a~~C~~C~~e~-~~~l~~l~~~~~~~~v~- 66 (160)
T 3lor_A 4 LDNAP----LLELDVQEWVNH---------EGLSNED-LRGK-VVVVEVFQMLCPGCVNHG-VPQAQKIHRMIDESQVQ- 66 (160)
T ss_dssp CTTCC----BCCCCEEEESSS---------CCCCHHH-HTTS-EEEEEEECTTCHHHHHTH-HHHHHHHHHHSCTTTEE-
T ss_pred cCCCc----CCCcccccccCC---------CccCHHH-hCCC-EEEEEEEcCCCcchhhhh-hHHHHHHHHHhCcCCcE-
Confidence 35777 69999998 665 8899999 5998 6778899999999998 5 79999999999999998
Q ss_pred EEEEec-------CCHHHHHHHHHHhCCCCceEEEeeCCch------HHHHcCCccccccccCCCCcceEEEEEe-CCEE
Q 028808 114 VICVAV-------NDPYVMNGWAEKLQAKDVIEFYGDFDGS------FHKSLDLGKDLSAALLGPRSERWSAYVE-DGRI 179 (203)
Q Consensus 114 vi~IS~-------d~~~~~~~~~~~~~l~~~fpllsD~~~~------v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I 179 (203)
+++|+. +++...++|+++++++ ||++.|.+.. ++++||+.. .|++|||| +|+|
T Consensus 67 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i 133 (160)
T 3lor_A 67 VIGLHSVFEHHDVMTPEALKVFIDEFGIK--FPVAVDMPREGQRIPSTMKKYRLEG-----------TPSIILADRKGRI 133 (160)
T ss_dssp EEEEECCCSCGGGSCHHHHHHHHHHTTCC--SCEEEECCCTTCSSCHHHHHTTCCS-----------SSEEEEECTTSBE
T ss_pred EEEEeccccccccCCHHHHHHHHHHcCCC--CcEEECCccccchhhhHHHhcccCc-----------cceEEEECCCCcE
Confidence 999997 6788999999999997 9999999998 999999853 47899999 9999
Q ss_pred EEEEeec
Q 028808 180 KALNVEE 186 (203)
Q Consensus 180 ~~~~~~~ 186 (203)
++++.+.
T Consensus 134 ~~~~~g~ 140 (160)
T 3lor_A 134 RQVQFGQ 140 (160)
T ss_dssp EEEEESC
T ss_pred EEEecCc
Confidence 9998865
No 68
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.90 E-value=4.9e-24 Score=168.70 Aligned_cols=131 Identities=16% Similarity=0.223 Sum_probs=110.6
Q ss_pred cccccccccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhH
Q 028808 24 RIPTSSRAYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNI 103 (203)
Q Consensus 24 ~~~~~~~~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~ 103 (203)
+.-..+...+.+.+|++ ||+|++++.+| + .+.+++++ ++|| +||++||++|||+|..+ +|.|++++
T Consensus 19 ~~~~~~~~~~~~~~G~~----~P~f~l~~~~g--~-----~~~~~l~~-~~gk-~vll~F~a~~C~~C~~~-~~~l~~l~ 84 (176)
T 3kh7_A 19 SHMLDPSELPSALIGKP----FPAFDLPSVQD--P-----ARRLTEAD-LKGK-PALVNVWGTWCPSCRVE-HPELTRLA 84 (176)
T ss_dssp CCCCCGGGSTTTTTTSB----CCCCEEEBSSC--T-----TSEEEGGG-GCSS-CEEEEEECTTCHHHHHH-HHHHHHHH
T ss_pred cccCCcccccccccCCc----CCCcEecccCC--C-----CceecHHH-hCCC-EEEEEEECCcCHHHHHH-HHHHHHHH
Confidence 44455667788999999 69999999875 1 16899999 5998 46678899999999999 99999877
Q ss_pred HHHHHcCCcEEEEEec-CCHHHHHHHHHHhCCCCceE-EEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEE
Q 028808 104 DKFKAKGIDSVICVAV-NDPYVMNGWAEKLQAKDVIE-FYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIK 180 (203)
Q Consensus 104 ~~f~~~gv~~vi~IS~-d~~~~~~~~~~~~~l~~~fp-llsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~ 180 (203)
++ |+. |++|+. |+++..++|.++++++ |+ +++|.+..++++||+.. .|++|||| +|+|+
T Consensus 85 ~~----~v~-vv~vs~~d~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~ 146 (176)
T 3kh7_A 85 EQ----GVV-IYGINYKDDNAAAIKWLNELHNP--YLLSISDADGTLGLDLGVYG-----------APETYLIDKQGIIR 146 (176)
T ss_dssp HT----TCE-EEEEEESCCHHHHHHHHHHTTCC--CSEEEEETTCHHHHHHTCCS-----------SCEEEEECTTCBEE
T ss_pred HC----CCE-EEEEeCCCCHHHHHHHHHHcCCC--CceEEECCcchHHHHcCCCC-----------CCeEEEECCCCeEE
Confidence 65 798 999995 5678899999999997 66 68999999999999853 47899999 99999
Q ss_pred EEEeec
Q 028808 181 ALNVEE 186 (203)
Q Consensus 181 ~~~~~~ 186 (203)
+.+.+.
T Consensus 147 ~~~~g~ 152 (176)
T 3kh7_A 147 HKIVGV 152 (176)
T ss_dssp EEEESC
T ss_pred EEEcCC
Confidence 998765
No 69
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.90 E-value=2.6e-24 Score=166.27 Aligned_cols=126 Identities=16% Similarity=0.276 Sum_probs=111.0
Q ss_pred ccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC
Q 028808 31 AYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 31 ~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g 110 (203)
....+++|++ +|+|++.+.+| +.+++++ ++|| ++|+.||++|||+|..+ ++.|++++++|++.+
T Consensus 11 ~~~~~~~G~~----~p~f~l~~~~g---------~~~~l~~-~~gk-~vll~F~~~~C~~C~~~-~~~l~~~~~~~~~~~ 74 (158)
T 3hdc_A 11 DAPLVRTGAL----APNFKLPTLSG---------ENKSLAQ-YRGK-IVLVNFWASWCPYCRDE-MPSMDRLVKSFPKGD 74 (158)
T ss_dssp CSCCCCTTSB----CCCCEEECTTS---------CEEESGG-GTTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHSSTTS
T ss_pred CCcccCCCCc----CCCceeEcCCC---------CEEehHH-hCCC-EEEEEEECCcCHHHHHH-HHHHHHHHHHcccCC
Confidence 3456889999 69999999886 8999999 4998 56677889999999999 999999999999888
Q ss_pred CcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCC
Q 028808 111 IDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAP 188 (203)
Q Consensus 111 v~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~ 188 (203)
+. +++|+.|+ ..++|.++++++ |++++|.+.++++.||+.. .|++|||| +|+|++++.+..+
T Consensus 75 ~~-~v~v~~d~--~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~G~~~ 137 (158)
T 3hdc_A 75 LV-VLAVNVEK--RFPEKYRRAPVS--FNFLSDATGQVQQRYGANR-----------LPDTFIVDRKGIIRQRVTGGIE 137 (158)
T ss_dssp EE-EEEEECSS--SCCGGGGGCCCS--CEEEECTTSHHHHHTTCCS-----------SSEEEEECTTSBEEEEEESCCC
T ss_pred eE-EEEEeCCH--HHHHHHHHcCCC--ceEEECchHHHHHHhCCCC-----------cceEEEEcCCCCEEEEEeCCCc
Confidence 98 99999988 467899999996 9999999999999999853 47799999 9999999988643
No 70
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.90 E-value=4.4e-24 Score=165.74 Aligned_cols=125 Identities=14% Similarity=0.259 Sum_probs=99.6
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
.+++|++ +|+|++++.+| ++++|++ ++|| +||++||++|||+|..+ +|.|++++++|+++|++
T Consensus 5 ~~~~g~~----~p~f~l~~~~g---------~~~~l~~-~~gk-~vll~f~a~~C~~C~~~-~~~l~~l~~~~~~~~~~- 67 (170)
T 2p5q_A 5 TSKNPES----VHDFTVKDAKE---------NDVDLSI-FKGK-VLLIVNVASKCGMTNSN-YAEMNQLYEKYKDQGLE- 67 (170)
T ss_dssp -----CC----GGGCEEEBTTS---------CEEEGGG-GTTS-EEEEEEECSSSTTHHHH-HHHHHHHHHHHGGGTEE-
T ss_pred cCCCCcc----ccceEEEcCCC---------CEecHHH-hCCC-EEEEEEEeccCCccHHH-HHHHHHHHHHhccCCEE-
Confidence 4678998 59999999986 8999999 5998 57778999999999999 99999999999999998
Q ss_pred EEEEecC--------CHHHHHHHHH-HhCCCCceEEE--eeCCchHHH-Hc--------CCccccccccCCCCcce---E
Q 028808 114 VICVAVN--------DPYVMNGWAE-KLQAKDVIEFY--GDFDGSFHK-SL--------DLGKDLSAALLGPRSER---W 170 (203)
Q Consensus 114 vi~IS~d--------~~~~~~~~~~-~~~l~~~fpll--sD~~~~v~~-~y--------Gv~~~~~~~g~~~~~~r---~ 170 (203)
|++||.| ++..+++|++ +++++ ||++ .|.++..++ .| |+.. ...| +
T Consensus 68 vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~---------~~~p~~~~ 136 (170)
T 2p5q_A 68 ILAFPCNQFGEEEPGTNDQITDFVCTRFKSE--FPIFDKIDVNGENASPLYRFLKLGKWGIFG---------DDIQWNFA 136 (170)
T ss_dssp EEEEECCTTTTCCCSCHHHHHHHHHHHTCCC--SCBBCCCBSSSTTBCHHHHHHHTHHHHTTC---------SCCCSTTC
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHhcCCC--ceeEeeeccCCCchHHHHHHHHhcCCCccC---------Cccccccc
Confidence 9999985 5678899999 78886 9999 688776542 22 3311 1234 7
Q ss_pred EEEEe-CCEEEEEEeec
Q 028808 171 SAYVE-DGRIKALNVEE 186 (203)
Q Consensus 171 tfIId-dG~I~~~~~~~ 186 (203)
+|||| +|+|++++.+.
T Consensus 137 ~~lid~~G~i~~~~~g~ 153 (170)
T 2p5q_A 137 KFLVNKDGQVVDRYYPT 153 (170)
T ss_dssp EEEECTTSCEEEEECTT
T ss_pred EEEECCCCCEEEeeCCC
Confidence 99999 99999998764
No 71
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.90 E-value=1.5e-24 Score=173.46 Aligned_cols=139 Identities=14% Similarity=0.143 Sum_probs=102.2
Q ss_pred cccccccccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhH
Q 028808 24 RIPTSSRAYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNI 103 (203)
Q Consensus 24 ~~~~~~~~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~ 103 (203)
+-++.++....++.|++ ||+|++++.+| ++++|++ ++|| +||++||++|||+|..+ +|.|++++
T Consensus 11 ~~~~~~~~~s~~~~~~~----~p~f~l~~~~G---------~~~~l~~-~~Gk-~vll~F~atwC~~C~~~-~~~l~~l~ 74 (190)
T 2vup_A 11 SSGLVPRGGSHMSAASS----IFDFEVLDADH---------KPYNLVQ-HKGS-PLLIYNVASKCGYTKGG-YETATTLY 74 (190)
T ss_dssp -------------CCCS----GGGSCCBBTTS---------SBCCGGG-GTTS-CEEEEEECSSSTTHHHH-HHHHHHHH
T ss_pred cccccccccccCCCCCc----ccCeEEEcCCC---------CEEEHHH-cCCC-EEEEEEecCCCCccHHH-HHHHHHHH
Confidence 34566777788999999 59999999886 8999999 5998 56778899999999999 99999999
Q ss_pred HHHHHcCCcEEEEEecC--------CHHHHHHHH-HHhCCCCceEEEe--eCCchHHH---------HcCCccccccccC
Q 028808 104 DKFKAKGIDSVICVAVN--------DPYVMNGWA-EKLQAKDVIEFYG--DFDGSFHK---------SLDLGKDLSAALL 163 (203)
Q Consensus 104 ~~f~~~gv~~vi~IS~d--------~~~~~~~~~-~~~~l~~~fplls--D~~~~v~~---------~yGv~~~~~~~g~ 163 (203)
++|+++|++ ||+||.| +++.+++|+ ++++++ ||++. |.++.+++ .||+...+
T Consensus 75 ~~~~~~~v~-vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~--~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P----- 146 (190)
T 2vup_A 75 NKYKSQGFT-VLAFPCNQFGGQEPGNEEEIKEFVCTKFKAE--FPIMAKINVNGENAHPLYEYMKKTKPGILKTK----- 146 (190)
T ss_dssp HHHGGGTCE-EEEEECCCSTTCCCSCHHHHHHHHHHHHCCC--SCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCC-----
T ss_pred HHHhcCCeE-EEEEEcCccCCCCCCCHHHHHHHHHHhcCCC--eEEEeecccCcccccHHHHHHHhhcCCcCCCc-----
Confidence 999999998 9999998 678899999 899996 99997 66666543 13443210
Q ss_pred CCCcceEEEEEe-CCEEEEEEeec
Q 028808 164 GPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 164 ~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
..+..+++|||| +|+|++++.+.
T Consensus 147 ~i~~~~~~~lid~~G~i~~~~~g~ 170 (190)
T 2vup_A 147 AIKWNFTSFLIDRDGVPVERFSPG 170 (190)
T ss_dssp SCCSTTCEEEECTTSCEEEEECTT
T ss_pred cccccceEEEECCCCcEEEEECCC
Confidence 011123799999 99999998753
No 72
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.90 E-value=7.6e-24 Score=160.11 Aligned_cols=122 Identities=15% Similarity=0.179 Sum_probs=107.1
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecc--cccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHH-HHc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIK--DIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKF-KAK 109 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~--dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f-~~~ 109 (203)
..+++|++ +|+|++.+.+| +.++|+ + ++|| ++|+.||++|||+|..+ +|.|.+++++| +++
T Consensus 3 ~~~~~g~~----~p~~~l~~~~g---------~~~~l~~~~-~~gk-~vll~F~~~~C~~C~~~-~~~l~~l~~~~~~~~ 66 (148)
T 3fkf_A 3 AKVTVGKS----APYFSLPNEKG---------EKLSRSAER-FRNR-YLLLNFWASWCDPQPEA-NAELKRLNKEYKKNK 66 (148)
T ss_dssp --CCTTSB----CCCCCEEBTTS---------CEECTTSTT-TTTS-EEEEEEECGGGCCCHHH-HHHHHHHHHHTTTCT
T ss_pred ccccCCCc----CCCeEeeCCCC---------CEEeccccc-cCCc-EEEEEEECCCCHHHHHH-hHHHHHHHHHhcCCC
Confidence 46889999 69999999886 899999 9 4998 56778899999999999 99999999999 888
Q ss_pred CCcEEEEEecCC-HHHHHHHHHHhCCCCceEEEeeC---CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEe
Q 028808 110 GIDSVICVAVND-PYVMNGWAEKLQAKDVIEFYGDF---DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 110 gv~~vi~IS~d~-~~~~~~~~~~~~l~~~fpllsD~---~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
|+. +++|+.|+ ....++|.++++++ |+++.|. +..+++.||+.. .|++|||| +|+|++.+.
T Consensus 67 ~~~-~v~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 67 NFA-MLGISLDIDREAWETAIKKDTLS--WDQVCDFTGLSSETAKQYAILT-----------LPTNILLSPTGKILARDI 132 (148)
T ss_dssp TEE-EEEEECCSCHHHHHHHHHHTTCC--SEEECCSCGGGCHHHHHTTCCS-----------SSEEEEECTTSBEEEESC
T ss_pred CeE-EEEEECCCCHHHHHHHHHHcCCC--ceEEEccCCcchHHHHhcCCCC-----------cCEEEEECCCCeEEEecC
Confidence 898 99999985 46889999999996 9999999 779999999853 47899999 999999875
No 73
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.90 E-value=1.8e-23 Score=159.46 Aligned_cols=137 Identities=18% Similarity=0.273 Sum_probs=114.8
Q ss_pred ccccCCCccccCCC-ceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 33 ASVAVGSDIVSAAQ-DVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 33 ~~~~~G~~~~~~AP-df~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
|.+++|++ || +|++.+.+| +.++|++ ++|| ++|+.||++|||+|..+ ++.|++++++++++++
T Consensus 1 m~l~~G~~----~p~~f~l~~~~g---------~~~~l~~-~~gk-~~lv~f~~~~C~~C~~~-~~~l~~l~~~~~~~~~ 64 (152)
T 2lja_A 1 MSLRSGNP----SAASFSYPDING---------KTVSLAD-LKGK-YIYIDVWATWCGPCRGE-LPALKELEEKYAGKDI 64 (152)
T ss_dssp CCTTTTCC----CSSSCEEEETTT---------EEEESTT-TTTS-EEEEEECCSSCCGGGGT-HHHHHHHHHHSTTSSE
T ss_pred CccccCCC----CCcccEeecCCC---------CEeeHHH-cCCC-EEEEEEECCcCHhHHHH-hHHHHHHHHHhccCCe
Confidence 46889999 59 999999886 8999999 5998 56678899999999999 9999999999998889
Q ss_pred cEEEEEecCCH-HHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCC
Q 028808 112 DSVICVAVNDP-YVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPS 189 (203)
Q Consensus 112 ~~vi~IS~d~~-~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~ 189 (203)
. +++|+.|+. ...++|.++++++ .++++.|.+.++++.||+.. .|++|||| +|+|++...+.
T Consensus 65 ~-~v~v~~d~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~--- 128 (152)
T 2lja_A 65 H-FVSLSCDKNKKAWENMVTKDQLK-GIQLHMGTDRTFMDAYLING-----------IPRFILLDRDGKIISANMTR--- 128 (152)
T ss_dssp E-EEEEECCSCHHHHHHHHHHHTCC-SEEEECSSCTHHHHHTTCCS-----------SCCEEEECTTSCEEESSCCC---
T ss_pred E-EEEEEccCcHHHHHHHHHhcCCC-CceeecCcchhHHHHcCcCC-----------CCEEEEECCCCeEEEccCCC---
Confidence 8 999999864 6789999999997 57999999999999999853 46789999 99999986542
Q ss_pred CcccCCHHHHHhc
Q 028808 190 KMKVSGGDVILGQ 202 (203)
Q Consensus 190 ~~~~~~a~~vL~~ 202 (203)
.+.++.+++|+.
T Consensus 129 -~~~~~l~~~l~~ 140 (152)
T 2lja_A 129 -PSDPKTAEKFNE 140 (152)
T ss_dssp -TTCHHHHHHHHH
T ss_pred -CCHHHHHHHHHH
Confidence 234455555543
No 74
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.90 E-value=8.2e-24 Score=163.30 Aligned_cols=121 Identities=13% Similarity=0.210 Sum_probs=102.3
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
....|++ +|+|++++.+| +.++|++ ++|| +||++||++|||+|..+ +|.|++++++|+++|++
T Consensus 8 ~~~~g~~----~p~f~l~~~~G---------~~~~l~~-~~gk-~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~- 70 (152)
T 2lrt_A 8 DKIKEAS----IIDIQLKDLKG---------NTRSLTD-LKGK-VVLIDFTVYNNAMSAAH-NLALRELYNKYASQGFE- 70 (152)
T ss_dssp SSSCTTC----SCCCCEEBTTS---------CEECTTT-GGGS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHGGGTEE-
T ss_pred hhccCCC----CCCeEEEcCCC---------CEEeHHH-hCCC-EEEEEEEcCCChhhHHH-HHHHHHHHHHhccCCeE-
Confidence 4567888 69999999886 8999999 5998 57778899999999999 99999999999999998
Q ss_pred EEEEecCCHH-HHHHHHHHhCCCCceEEEeeCCch---HHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 114 VICVAVNDPY-VMNGWAEKLQAKDVIEFYGDFDGS---FHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 114 vi~IS~d~~~-~~~~~~~~~~l~~~fpllsD~~~~---v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
|++||.|+.. ..++|.+ +++ ||++.|.++. +++.||+.. .|++|||| +|+|++++.+.
T Consensus 71 vv~i~~d~~~~~~~~~~~--~~~--~~~~~d~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~ 133 (152)
T 2lrt_A 71 IYQISLDGDEHFWKTSAD--NLP--WVCVRDANGAYSSYISLYNVTN-----------LPSVFLVNRNNELSARGENI 133 (152)
T ss_dssp EEEEECSCCHHHHHHHHT--TCS--SEEEECSSGGGCHHHHHHTCCS-----------CSEEEEEETTTEEEEETTTC
T ss_pred EEEEEccCCHHHHHHHHh--CCC--ceEEECCCCcchHHHHHcCccc-----------CceEEEECCCCeEEEecCCH
Confidence 9999998753 3455543 365 9999999987 999999853 47899999 99999987653
No 75
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.90 E-value=6.4e-24 Score=174.88 Aligned_cols=126 Identities=17% Similarity=0.145 Sum_probs=95.7
Q ss_pred CCceEEeccc-cccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC---
Q 028808 45 AQDVSLQKAR-TWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN--- 120 (203)
Q Consensus 45 APdf~l~~~~-g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d--- 120 (203)
+|+|++++.+ | +.++|++ ++|| +||++||++|||+|. | +|.|++++++|+++|++ ||+||+|
T Consensus 35 ~pdF~l~d~~~G---------~~v~Lsd-~~GK-vvll~FwAt~C~~c~-e-~p~L~~l~~~~~~~g~~-Vlgvs~d~f~ 100 (215)
T 2i3y_A 35 IYDYEAIALNKN---------EYVSFKQ-YVGK-HILFVNVATYCGLTA-Q-YPELNALQEELKPYGLV-VLGFPCNQFG 100 (215)
T ss_dssp GGGCEEEBSSSS---------CEEEGGG-GTTS-EEEEEEECSSSGGGG-G-HHHHHHHHHHHGGGTEE-EEEEECCCST
T ss_pred cCCcEeeeCCCC---------CEEcHHH-hCCC-EEEEEEeCCCCCChH-h-HHHHHHHHHHhccCCeE-EEEEEccccC
Confidence 6999999997 6 8999999 5998 678889999999998 9 99999999999999998 9999965
Q ss_pred -----CHHHHHHHHH------HhCCCCceEEEeeCC--chHH-HHcCCccccc-----ccc------------CCCCcce
Q 028808 121 -----DPYVMNGWAE------KLQAKDVIEFYGDFD--GSFH-KSLDLGKDLS-----AAL------------LGPRSER 169 (203)
Q Consensus 121 -----~~~~~~~~~~------~~~l~~~fpllsD~~--~~v~-~~yGv~~~~~-----~~g------------~~~~~~r 169 (203)
+++.+++|++ +++++ ||+++|.+ +..+ ..|+...... ..| ......|
T Consensus 101 ~~e~~~~~~i~~f~~~~~~~~~~~~~--fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~np 178 (215)
T 2i3y_A 101 KQEPGDNKEILPGLKYVRPGGGFVPS--FQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNF 178 (215)
T ss_dssp TCCCSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTT
T ss_pred cCCCCCHHHHHHHHHhccchhccCcc--ceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCc
Confidence 4577899999 88886 99998753 3321 1222111000 000 0111237
Q ss_pred EEEEEe-CCEEEEEEeec
Q 028808 170 WSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 170 ~tfIId-dG~I~~~~~~~ 186 (203)
++|||| +|+|++++.+.
T Consensus 179 ttfLID~~G~vv~~~~g~ 196 (215)
T 2i3y_A 179 EKFLVGPDGIPVMRWSHR 196 (215)
T ss_dssp CEEEECTTSCEEEEECTT
T ss_pred eEEEECCCCeEEEEeCCC
Confidence 899999 99999998753
No 76
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.90 E-value=1.8e-23 Score=161.37 Aligned_cols=127 Identities=8% Similarity=0.088 Sum_probs=102.8
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCC-CCccchhhHHHhHHHHHH----cCCcEEEEEec
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGV-CSNQHVPSYKNNIDKFKA----KGIDSVICVAV 119 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~-C~~ehl~~l~~~~~~f~~----~gv~~vi~IS~ 119 (203)
||+|++++.+| ++++|++ ++|| ++|++||++|||+ |..+ ++.|++++++|++ .+++ |++||.
T Consensus 3 ap~f~l~~~~G---------~~~~l~~-~~gk-~vll~f~~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~~~-vv~vs~ 69 (164)
T 2ggt_A 3 GGPFSLTTHTG---------ERKTDKD-YLGQ-WLLIYFGFTHCPDVCPEE-LEKMIQVVDEIDSITTLPDLT-PLFISI 69 (164)
T ss_dssp CCCCEEEETTS---------CEEEGGG-GTTC-EEEEEEECTTCSSHHHHH-HHHHHHHHHHHHHSSSSCCEE-EEEEES
T ss_pred CCCeEEEeCCC---------CEEeHHH-cCCC-EEEEEEEeCCCCchhHHH-HHHHHHHHHHHhhccCCCcEE-EEEEEe
Confidence 89999999886 8999999 5998 5677899999998 9999 9999999999987 4888 999998
Q ss_pred CC----HHHHHHHHHHhCCCCceEEEe---eCCchHHHHcCCccccccc-cCCC---CcceEEEEEe-CCEEEEEEeec
Q 028808 120 ND----PYVMNGWAEKLQAKDVIEFYG---DFDGSFHKSLDLGKDLSAA-LLGP---RSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 120 d~----~~~~~~~~~~~~l~~~fplls---D~~~~v~~~yGv~~~~~~~-g~~~---~~~r~tfIId-dG~I~~~~~~~ 186 (203)
|+ ++.+++|+++++++ |+++. |...+++++||+....... ..+. ...+++|||| +|+|++++.+.
T Consensus 70 d~~~d~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 146 (164)
T 2ggt_A 70 DPERDTKEAIANYVKEFSPK--LVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN 146 (164)
T ss_dssp CTTTCCHHHHHHHHHTTCSS--CEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT
T ss_pred CCCCCCHHHHHHHHHHcCCC--eEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC
Confidence 75 67899999999986 99994 6667899999997532100 0000 0123799999 99999998653
No 77
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.89 E-value=1.4e-23 Score=165.50 Aligned_cols=133 Identities=14% Similarity=0.069 Sum_probs=104.8
Q ss_pred cCCCccccCCC-ceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCC-CCCccchhhHHHhHHHHHH--cCC
Q 028808 36 AVGSDIVSAAQ-DVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTG-VCSNQHVPSYKNNIDKFKA--KGI 111 (203)
Q Consensus 36 ~~G~~~~~~AP-df~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp-~C~~ehl~~l~~~~~~f~~--~gv 111 (203)
.+|++ +| +|++++.+| ++++|++ ++|| ++|++||++||| +|..| ++.|++++++|++ .++
T Consensus 2 ~~G~~----~P~~f~l~d~~G---------~~v~l~~-~~Gk-~vll~F~~t~C~~~C~~~-~~~l~~~~~~~~~~~~~~ 65 (170)
T 3me7_A 2 SLGTY----VPGDITLVDSYG---------NEFQLKN-LKGK-PIILSPIYTHCRAACPLI-TKSLLKVIPKLGTPGKDF 65 (170)
T ss_dssp CTTCB----CCTTCEEEETTC---------CEEEGGG-GTTS-CEEEEEECTTCCSHHHHH-HHHHHTTHHHHCCBTTTB
T ss_pred CCCCc----CCCCeEEEcCCc---------CEEchHH-hCCC-EEEEEEECCCCCchhHHH-HHHHHHHHHHhhhcCCce
Confidence 57888 69 999999886 8999999 5998 567789999998 59999 9999999999975 458
Q ss_pred cEEEEEecC---CHHHHHHHHHHhCCCC-ceEEEe--e--CCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 112 DSVICVAVN---DPYVMNGWAEKLQAKD-VIEFYG--D--FDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 112 ~~vi~IS~d---~~~~~~~~~~~~~l~~-~fplls--D--~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
+ ||+||.| +++.+++|+++++++. +++++. | ...+++++||+.......+ ....|++|||| +|+|+++
T Consensus 66 ~-vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 66 W-VITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGND--FIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp E-EEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTE--EECCCEEEEECTTSBEEEE
T ss_pred E-EEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCc--cccCceEEEECCCCeEEEE
Confidence 7 9999986 6788999999999751 344442 3 3578999999865321111 12347799999 9999999
Q ss_pred EeecC
Q 028808 183 NVEEA 187 (203)
Q Consensus 183 ~~~~~ 187 (203)
+.+..
T Consensus 143 ~~g~~ 147 (170)
T 3me7_A 143 IYGVN 147 (170)
T ss_dssp EESSS
T ss_pred EeCCC
Confidence 87654
No 78
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.89 E-value=3.3e-23 Score=158.18 Aligned_cols=122 Identities=18% Similarity=0.213 Sum_probs=106.8
Q ss_pred ccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEE
Q 028808 35 VAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSV 114 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~v 114 (203)
..+|++ +|+|++.+.+| +.++++++ +|| ++|++||++|||+|..+ ++.|++++++++++|+. +
T Consensus 2 ~~~G~~----~p~~~l~~~~g---------~~~~l~~~-~gk-~~lv~f~~~~C~~C~~~-~~~l~~l~~~~~~~~~~-v 64 (153)
T 2l5o_A 2 SLDSKT----APAFSLPDLHG---------KTVSNADL-QGK-VTLINFWFPSCPGCVSE-MPKIIKTANDYKNKNFQ-V 64 (153)
T ss_dssp --CCTT----CCSCEEECTTS---------CEEEHHHH-TTC-EEEEEEECTTCTTHHHH-HHHHHHHHHHGGGTTEE-E
T ss_pred CCCCCC----CCCcEeecCCC---------CCccHHHh-CCC-EEEEEEECCCCccHHHH-HHHHHHHHHHhccCCeE-E
Confidence 357888 69999999886 89999994 998 56678899999999999 99999999999998998 9
Q ss_pred EEEe--cCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 115 ICVA--VNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 115 i~IS--~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
++|+ .|+.+..++|+++++++ |+++.|.+..+++.||+.. .|++|||| +|+|++.+.+.
T Consensus 65 v~v~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~i~~-----------~P~~~lid~~G~i~~~~~g~ 126 (153)
T 2l5o_A 65 LAVAQPIDPIESVRQYVKDYGLP--FTVMYDADKAVGQAFGTQV-----------YPTSVLIGKKGEILKTYVGE 126 (153)
T ss_dssp EEEECTTSCHHHHHHHHHHTTCC--SEEEECSSCHHHHHHTCCS-----------SSEEEEECSSSCCCEEEESS
T ss_pred EEEecCCCCHHHHHHHHHHcCCC--ceEEcCchHHHHHHcCCCc-----------cCeEEEECCCCcEEEEEcCC
Confidence 9999 46778899999999997 9999999999999999853 47789999 99999988763
No 79
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.89 E-value=1.4e-24 Score=173.38 Aligned_cols=138 Identities=13% Similarity=0.178 Sum_probs=100.9
Q ss_pred cccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc
Q 028808 30 RAYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 30 ~~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
+....+..+++ ||+|+++|.+| ++++|++ ++|| +||++||++|||+|..| +|.|++++++|+++
T Consensus 15 ~~~~~~~~~~~----~p~f~l~d~~G---------~~~~l~~-~~Gk-~vlv~F~atwC~~C~~~-~p~l~~l~~~~~~~ 78 (187)
T 3dwv_A 15 SSRKKMSAASS----IFDFEVLDADH---------KPYNLVQ-HKGS-PLLIYNVASKCGYTKGG-YETATTLYNKYKSQ 78 (187)
T ss_dssp -----CTTCCS----GGGSCCBBTTS---------CBCCGGG-GTTS-CEEEEEECCBCSCCTTH-HHHHHHHHHHHGGG
T ss_pred hhhhhhcCCCc----cCCeEEEcCCC---------CEeeHHH-hCCC-EEEEEEecCCCCCcHHH-HHHHHHHHHHhhhC
Confidence 34455777888 59999999986 8999999 5998 57788999999999999 99999999999999
Q ss_pred CCcEEEEEecC--------CHHHHHHHHHH-hCCCCceEEEe--eCCchHHH-HcCCccccccccCCCCcce---EEEEE
Q 028808 110 GIDSVICVAVN--------DPYVMNGWAEK-LQAKDVIEFYG--DFDGSFHK-SLDLGKDLSAALLGPRSER---WSAYV 174 (203)
Q Consensus 110 gv~~vi~IS~d--------~~~~~~~~~~~-~~l~~~fplls--D~~~~v~~-~yGv~~~~~~~g~~~~~~r---~tfII 174 (203)
|++ ||+||.| +++.+++|+++ ++++ ||+++ |.++..+. .|+..........+....| ++|||
T Consensus 79 ~~~-vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~li 155 (187)
T 3dwv_A 79 GFT-VLAFPSNQFGGQEPGNEEEIKEFVCTKFKAE--FPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLI 155 (187)
T ss_dssp TCE-EEEEEBCCCSSCSSSBTTHHHHSCCBCCCCS--SCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEE
T ss_pred CeE-EEEEECcccCCCCCCCHHHHHHHHHhccCCC--CceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEE
Confidence 998 9999986 35778888885 4886 99997 66655442 2211000000001112346 89999
Q ss_pred e-CCEEEEEEeec
Q 028808 175 E-DGRIKALNVEE 186 (203)
Q Consensus 175 d-dG~I~~~~~~~ 186 (203)
| +|+|++.+.+.
T Consensus 156 D~~G~i~~~~~g~ 168 (187)
T 3dwv_A 156 DRDGVPVERFSPG 168 (187)
T ss_dssp CTTSCEEEEECTT
T ss_pred CCCCCEEEEECCC
Confidence 9 99999998754
No 80
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.89 E-value=3.1e-23 Score=155.93 Aligned_cols=124 Identities=13% Similarity=0.208 Sum_probs=105.3
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCC
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGI 111 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv 111 (203)
...+.+|++ +|+|++++.+| +.+++++ +|| ++|+.||++|||+|..+ ++.|.++++++++.++
T Consensus 6 ~~~~~~g~~----~p~~~l~~~~g---------~~~~l~~--~gk-~~ll~f~~~~C~~C~~~-~~~l~~~~~~~~~~~~ 68 (145)
T 3erw_A 6 QAEEKQPAV----PAVFLMKTIEG---------EDISIPN--KGQ-KTILHFWTSWCPPCKKE-LPQFQSFYDAHPSDSV 68 (145)
T ss_dssp ------CCS----CCEEEEECTTS---------CEEEESC--TTS-EEEEEEECSSCHHHHHH-HHHHHHHHHHCCCSSE
T ss_pred cccccCCCc----CCCceeecCCC---------CEEeHHH--CCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHcCCCCE
Confidence 346788999 69999999886 8899998 888 56667889999999999 9999999999987789
Q ss_pred cEEEEEecC----CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 112 DSVICVAVN----DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 112 ~~vi~IS~d----~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
. +++|+.| ++...++|.++++++ ||++.|.+..+++.||+.. .|++|||| +|+|++.+.+.
T Consensus 69 ~-~v~v~~d~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~ 134 (145)
T 3erw_A 69 K-LVTVNLVNSEQNQQVVEDFIKANKLT--FPIVLDSKGELMKEYHIIT-----------IPTSFLLNEKGEIEKTKIGP 134 (145)
T ss_dssp E-EEEEECGGGSSCHHHHHHHHHHTTCC--SCEEECSSSHHHHHTTCCE-----------ESEEEEECTTCCEEEEEESC
T ss_pred E-EEEEEccCCcCCHHHHHHHHHHcCCc--eeEEEcCchhHHHhcCcCc-----------cCeEEEEcCCCcEEEEEcCC
Confidence 8 9999986 678899999999996 9999999999999999853 57899999 99999988763
No 81
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.89 E-value=2.5e-23 Score=168.13 Aligned_cols=138 Identities=10% Similarity=0.066 Sum_probs=103.2
Q ss_pred cccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCC-CCccchhhHHHhHHHHHHc-
Q 028808 32 YASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGV-CSNQHVPSYKNNIDKFKAK- 109 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~-C~~ehl~~l~~~~~~f~~~- 109 (203)
.....+|++. .+|+|++++.+| ++++|++ ++|| +||++||++|||+ |..+ +|.|++++++|+++
T Consensus 10 ~~~~~~g~~~--~~p~f~l~d~~G---------~~v~l~~-~~Gk-~vlv~F~at~C~~vC~~~-~~~l~~l~~~~~~~~ 75 (200)
T 2b7k_A 10 EANRGYGKPS--LGGPFHLEDMYG---------NEFTEKN-LLGK-FSIIYFGFSNCPDICPDE-LDKLGLWLNTLSSKY 75 (200)
T ss_dssp ------CCCC--CCCCCEEEETTS---------CEEEGGG-GTTS-CEEEEEECTTCCSHHHHH-HHHHHHHHHHHHHHH
T ss_pred hhHhccCCCC--cCCCEEEEcCCC---------CEEeHHH-cCCC-EEEEEEECCCCcchhHHH-HHHHHHHHHHHHHhh
Confidence 4457788872 149999999876 8999999 5998 5677899999997 9999 99999999999864
Q ss_pred --CCcEEEEEecC----CHHHHHHHHHHhCCCCceEEEee---CCchHHHHcCCcccccc---cc--CCCCcceEEEEEe
Q 028808 110 --GIDSVICVAVN----DPYVMNGWAEKLQAKDVIEFYGD---FDGSFHKSLDLGKDLSA---AL--LGPRSERWSAYVE 175 (203)
Q Consensus 110 --gv~~vi~IS~d----~~~~~~~~~~~~~l~~~fpllsD---~~~~v~~~yGv~~~~~~---~g--~~~~~~r~tfIId 175 (203)
+++ |++||.| +++.+++|+++++.+ |+++.+ ...+++++||+....+. .| ......|++||||
T Consensus 76 ~~~v~-vv~Is~D~~~d~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD 152 (200)
T 2b7k_A 76 GITLQ-PLFITCDPARDSPAVLKEYLSDFHPS--ILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMD 152 (200)
T ss_dssp CCCCE-EEEEESCTTTCCHHHHHHHHTTSCTT--CEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEEC
T ss_pred CCceE-EEEEECCCCCCCHHHHHHHHHHcCCC--ceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEEC
Confidence 898 9999998 578899999999986 888874 35789999999732110 01 0011235789999
Q ss_pred -CCEEEEEEeec
Q 028808 176 -DGRIKALNVEE 186 (203)
Q Consensus 176 -dG~I~~~~~~~ 186 (203)
+|+|++.+.+.
T Consensus 153 ~~G~i~~~~~g~ 164 (200)
T 2b7k_A 153 PEGQFVDALGRN 164 (200)
T ss_dssp TTSCEEEEECTT
T ss_pred CCCcEEEEeCCC
Confidence 99999998654
No 82
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=3.8e-25 Score=170.73 Aligned_cols=125 Identities=18% Similarity=0.293 Sum_probs=108.7
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHH-hHHHHH-HcCC
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKN-NIDKFK-AKGI 111 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~-~~~~f~-~~gv 111 (203)
.+++|++ +|+|++++.+| +.++|++ ++|| ++|++||++|||+|..+ +|.|++ ++++++ +.++
T Consensus 6 ~l~~g~~----~p~f~l~~~~g---------~~~~l~~-~~gk-~vll~f~a~~C~~C~~~-~~~l~~~l~~~~~~~~~~ 69 (159)
T 2ls5_A 6 IVRIGEM----APDFTITLTDG---------KQVTLSS-LRGK-VVMLQFTASWCGVCRKE-MPFIEKDIWLKHKDNADF 69 (159)
Confidence 4778999 69999999886 8999999 4998 56778999999999999 999998 999998 7889
Q ss_pred cEEEEEecCCH-HHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 112 DSVICVAVNDP-YVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 112 ~~vi~IS~d~~-~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
. +++|+.|+. +..++|.++++++ ||+++|.+.++++.||+... ..|++|||| +|+|++.+.+.
T Consensus 70 ~-vv~v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~---------~~P~~~lid~~G~i~~~~~g~ 134 (159)
T 2ls5_A 70 A-LIGIDRDEPLEKVLAFAKSTGVT--YPLGLDPGADIFAKYALRDA---------GITRNVLIDREGKIVKLTRLY 134 (159)
Confidence 8 999999875 5688999999996 99999999999999997431 247789999 99999998764
No 83
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.89 E-value=5.7e-24 Score=168.52 Aligned_cols=128 Identities=15% Similarity=0.170 Sum_probs=99.6
Q ss_pred ccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEE
Q 028808 35 VAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSV 114 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~v 114 (203)
-.+|++ +|+|++++.+| +.++|++ ++|| +||++||++|||+|..| +|.|++++++|+++|+. |
T Consensus 12 ~~~~~~----~p~f~l~d~~G---------~~v~l~~-~~Gk-~vlv~F~atwC~~C~~~-~p~l~~l~~~~~~~~~~-v 74 (180)
T 3kij_A 12 KPKINS----FYAFEVKDAKG---------RTVSLEK-YKGK-VSLVVNVASDCQLTDRN-YLGLKELHKEFGPSHFS-V 74 (180)
T ss_dssp CCCCCC----GGGCEEEBTTS---------CEEEGGG-GTTS-EEEEEEECSSSTTHHHH-HHHHHHHHHHHTTTSEE-E
T ss_pred cCCcCc----ccceEEecCCC---------CEecHHH-cCCC-EEEEEEEecCCCCcHHH-HHHHHHHHHHhccCCeE-E
Confidence 456778 49999999986 8999999 5998 78889999999999999 99999999999999998 9
Q ss_pred EEEecC--------CHHHHHHHHHH-hCCCCceEEEeeC--CchHHH-HcCCccccccccCCCCcceE----EEEEe-CC
Q 028808 115 ICVAVN--------DPYVMNGWAEK-LQAKDVIEFYGDF--DGSFHK-SLDLGKDLSAALLGPRSERW----SAYVE-DG 177 (203)
Q Consensus 115 i~IS~d--------~~~~~~~~~~~-~~l~~~fpllsD~--~~~v~~-~yGv~~~~~~~g~~~~~~r~----tfIId-dG 177 (203)
|+||.| +++.+++|+++ ++++ ||+++|. .+..+. .|+..... .+ ..|. +|||| +|
T Consensus 75 i~is~d~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~--~~----~~p~~~~~~~lid~~G 146 (180)
T 3kij_A 75 LAFPCNQFGESEPRPSKEVESFARKNYGVT--FPIFHKIKILGSEGEPAFRFLVDS--SK----KEPRWNFWKYLVNPEG 146 (180)
T ss_dssp EEEECCCSTTCCCSCHHHHHHHHHHHHCCC--SCBBCCCCCSSTTCCHHHHHHHHH--HT----CCCSSTTCEEEECTTS
T ss_pred EEEECCccccCCCCCHHHHHHHHHHhcCCC--CceeeeeeccCccccHHHHHHHhc--CC----CCccccceEEEECCCC
Confidence 999965 67889999999 9996 9998743 222111 12111100 01 1234 89999 99
Q ss_pred EEEEEEeecC
Q 028808 178 RIKALNVEEA 187 (203)
Q Consensus 178 ~I~~~~~~~~ 187 (203)
+|++.+.+..
T Consensus 147 ~i~~~~~g~~ 156 (180)
T 3kij_A 147 QVVKFWRPEE 156 (180)
T ss_dssp CEEEEECTTC
T ss_pred CEEEEECCCC
Confidence 9999987653
No 84
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.89 E-value=3.5e-23 Score=159.63 Aligned_cols=129 Identities=14% Similarity=0.155 Sum_probs=109.4
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
..+++|++ +|+|++.+.+| +.+++++ ++|| ++|++||++|||+|..+ ++.|++++++|+++|+.
T Consensus 6 ~~~~~g~~----~p~~~l~~~~g---------~~~~l~~-~~gk-~vlv~f~~~~C~~C~~~-~~~l~~l~~~~~~~~v~ 69 (165)
T 3or5_A 6 QADARPTP----APSFSGVTVDG---------KPFSSAS-LKGK-AYIVNFFATWCPPCRSE-IPDMVQVQKTWASRGFT 69 (165)
T ss_dssp -CCCCCCB----CCCCEEECTTS---------CEEEGGG-GTTC-EEEEEEECTTSHHHHHH-HHHHHHHHHHHTTTTEE
T ss_pred hhhcCCCC----CCCceeeCCCC---------CEechhH-cCCC-EEEEEEEcCcCHHHHHH-HHHHHHHHHHhccCCeE
Confidence 45788999 69999999886 8999999 5998 56677889999999999 99999999999998998
Q ss_pred EEEEEecCC-HHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 113 SVICVAVND-PYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 113 ~vi~IS~d~-~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+++|+.|+ +...++|.++++++ ||++.|.+ ++.+.|+..... +....|++|||| +|+|++.+.+.
T Consensus 70 -~v~v~~d~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~-----~i~~~P~~~lid~~G~i~~~~~g~ 136 (165)
T 3or5_A 70 -FVGIAVNEQLPNVKNYMKTQGII--YPVMMATP-ELIRAFNGYIDG-----GITGIPTSFVIDASGNVSGVIVGP 136 (165)
T ss_dssp -EEEEECSCCHHHHHHHHHHHTCC--SCEEECCH-HHHHHHHTTSTT-----CSCSSSEEEEECTTSBEEEEECSC
T ss_pred -EEEEECCCCHHHHHHHHHHcCCC--CceEecCH-HHHHHHhhhhcc-----CCCCCCeEEEECCCCcEEEEEcCC
Confidence 99999886 67889999999996 99999976 899999654321 123468899999 99999988764
No 85
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.89 E-value=6.8e-23 Score=159.36 Aligned_cols=127 Identities=12% Similarity=0.118 Sum_probs=103.4
Q ss_pred C-CceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCC-CCccchhhHHHhHHHHHH----cCCcEEEEEe
Q 028808 45 A-QDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGV-CSNQHVPSYKNNIDKFKA----KGIDSVICVA 118 (203)
Q Consensus 45 A-Pdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~-C~~ehl~~l~~~~~~f~~----~gv~~vi~IS 118 (203)
+ |+|++++.+| ++++|++ ++|| ++|++||++|||+ |..+ +|.|++++++|++ .+++ |++||
T Consensus 5 ~~p~f~l~~~~G---------~~~~l~~-~~gk-~vll~F~~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~v~-vv~is 71 (171)
T 2rli_A 5 GQGDFHLLDHRG---------RARCKAD-FRGQ-WVLMYFGFTHCPDICPDE-LEKLVQVVRQLEAEPGLPPVQ-PVFIT 71 (171)
T ss_dssp CCSCCEEEETTS---------CEEETTT-TTTS-EEEEEEECTTCSSSHHHH-HHHHHHHHHHHHHSTTSCCEE-EEEEE
T ss_pred CCCCeEEEeCCC---------CEEeHHH-hCCC-EEEEEEEcCCCCchhHHH-HHHHHHHHHHHhhccCCCceE-EEEEE
Confidence 6 9999999886 8999999 5998 5778899999997 9999 9999999999986 5888 99999
Q ss_pred cC----CHHHHHHHHHHhCCCCceEEEeeCC---chHHHHcCCccccccc----cCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 119 VN----DPYVMNGWAEKLQAKDVIEFYGDFD---GSFHKSLDLGKDLSAA----LLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 119 ~d----~~~~~~~~~~~~~l~~~fpllsD~~---~~v~~~yGv~~~~~~~----g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
.| +++.+++|+++++++ |++++|.. .+++++||+....... +......|++|||| +|+|++++.+.
T Consensus 72 ~d~~~d~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 149 (171)
T 2rli_A 72 VDPERDDVEAMARYVQDFHPR--LLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS 149 (171)
T ss_dssp SCSTTCCHHHHHHHHHTTCTT--CCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS
T ss_pred ECCCCCCHHHHHHHHHHcCCC--eEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC
Confidence 87 478899999999986 99999753 5799999997532100 00011235799999 99999998754
No 86
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.89 E-value=2.1e-23 Score=170.33 Aligned_cols=133 Identities=11% Similarity=0.076 Sum_probs=99.5
Q ss_pred ccCCCccccCCCceEEeccc-cccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 35 VAVGSDIVSAAQDVSLQKAR-TWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~~-g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
...+++ +|+|++++.+ | +.++|++ ++|| +||++||++|||+|..| +|.|++++++|+++|+.
T Consensus 20 ~~~~~~----~p~f~l~~~~~G---------~~v~l~~-~~Gk-~vlv~FwatwC~~C~~e-~p~l~~l~~~~~~~g~~- 82 (208)
T 2f8a_A 20 FQSMQS----VYAFSARPLAGG---------EPVSLGS-LRGK-VLLIENVASLGGTTVRD-YTQMNELQRRLGPRGLV- 82 (208)
T ss_dssp --CCCC----GGGCEECBTTCS---------SCEEGGG-GTTS-EEEEEEECSSSTTHHHH-HHHHHHHHHHHGGGTEE-
T ss_pred hhhcCc----cCceEeeeCCCC---------CCccHHH-cCCC-EEEEEEECCCCccHHHH-HHHHHHHHHHccCCCeE-
Confidence 344666 6999999987 6 8999999 5998 67889999999999999 99999999999999998
Q ss_pred EEEEecC--------CHHHHHHHHH------HhCCCCceEEEeeCC--chHHH--------HcCC--------ccccc--
Q 028808 114 VICVAVN--------DPYVMNGWAE------KLQAKDVIEFYGDFD--GSFHK--------SLDL--------GKDLS-- 159 (203)
Q Consensus 114 vi~IS~d--------~~~~~~~~~~------~~~l~~~fpllsD~~--~~v~~--------~yGv--------~~~~~-- 159 (203)
||+||.| ++..+++|++ +++++ ||+++|.+ +..+. .++. .....
T Consensus 83 vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~--fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 160 (208)
T 2f8a_A 83 VLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPN--FMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLI 160 (208)
T ss_dssp EEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGC
T ss_pred EEEEECCcccccCCCCHHHHHHHHHhcccccccccc--eEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccc
Confidence 9999986 4578899998 78886 99997643 33221 2221 00000
Q ss_pred ---ccc-CCCCcceEEEEEe-CCEEEEEEeec
Q 028808 160 ---AAL-LGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 160 ---~~g-~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
..+ .+....|++|||| +|+|++++.+.
T Consensus 161 ~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~ 192 (208)
T 2f8a_A 161 TWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRR 192 (208)
T ss_dssp CSSSCCTTCCCSTTCEEEECTTSCEEEEECTT
T ss_pred cccccccCccccCceEEEEcCCCcEEEEeCCC
Confidence 000 0122348899999 99999999764
No 87
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=171.21 Aligned_cols=126 Identities=15% Similarity=0.109 Sum_probs=95.5
Q ss_pred CCceEEeccc-cccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC---
Q 028808 45 AQDVSLQKAR-TWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN--- 120 (203)
Q Consensus 45 APdf~l~~~~-g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d--- 120 (203)
+|+|++++.+ | +.++|++ ++|| +||++||++|||+| .| +|.|++++++|+++|+. ||+||+|
T Consensus 17 ~pdF~l~d~~~G---------~~v~Ls~-~kGK-vvll~F~At~C~~c-~e-~p~L~~l~~~~~~~g~~-vlgvs~d~f~ 82 (207)
T 2r37_A 17 IYEYGALTIDGE---------EYIPFKQ-YAGK-YVLFVNVASYGGLT-GQ-YIELNALQEELAPFGLV-ILGFPCNQFG 82 (207)
T ss_dssp GGGCEEEBTTSS---------CEEEGGG-GTTS-EEEEEEECSSSTTT-TH-HHHHHHHHHHHGGGTEE-EEEEECCCBT
T ss_pred cCCeEeeeCCCC---------CEEcHHH-hCCC-EEEEEEeCCCCCCh-HH-HHHHHHHHHHhccCCEE-EEEEECcccC
Confidence 6999999997 6 8999999 5998 77888999999999 79 99999999999999998 9999964
Q ss_pred -----CHHHHHHHHH------HhCCCCceEEEeeCC--chHH-HHcCCccccc-----ccc------------CCCCcce
Q 028808 121 -----DPYVMNGWAE------KLQAKDVIEFYGDFD--GSFH-KSLDLGKDLS-----AAL------------LGPRSER 169 (203)
Q Consensus 121 -----~~~~~~~~~~------~~~l~~~fpllsD~~--~~v~-~~yGv~~~~~-----~~g------------~~~~~~r 169 (203)
++..+++|++ +++++ ||+++|.+ +..+ ..|+...... ..| ......|
T Consensus 83 ~~e~~~~~~i~~f~~~~~~~~~~~~~--fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ 160 (207)
T 2r37_A 83 KQEPGENSEILPTLKYVRPGGGFVPN--FQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF 160 (207)
T ss_dssp TCCCSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT
T ss_pred cCCCCCHHHHHHHHHhcchhhccCcc--ceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccc
Confidence 4578899999 88986 99998753 4321 1222111000 000 0011236
Q ss_pred EEEEEe-CCEEEEEEeec
Q 028808 170 WSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 170 ~tfIId-dG~I~~~~~~~ 186 (203)
++|||| +|+|++++.+.
T Consensus 161 ttflID~~G~i~~~~~g~ 178 (207)
T 2r37_A 161 EKFLVGPDGIPIMRWHHR 178 (207)
T ss_dssp CEEEECTTSCEEEEECTT
T ss_pred eEEEECCCCcEEEEECCC
Confidence 899999 99999998753
No 88
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.89 E-value=1.1e-23 Score=161.49 Aligned_cols=129 Identities=11% Similarity=0.154 Sum_probs=102.9
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHH
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYV 124 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~ 124 (203)
+|+|++. .+| +.++|++ ++|| +||++||++|||+|..+ +|.|++++++|++.++. +++|+.|+++.
T Consensus 5 a~~~~~~-~~G---------~~~~l~~-~~gk-~vlv~F~a~wC~~C~~~-~~~l~~l~~~~~~~~v~-vv~v~~d~~~~ 70 (151)
T 3raz_A 5 ADELAGW-KDN---------TPQSLQS-LKAP-VRIVNLWATWCGPCRKE-MPAMSKWYKAQKKGSVD-MVGIALDTSDN 70 (151)
T ss_dssp --CEEET-TTC---------CEECGGG-CCSS-EEEEEEECTTCHHHHHH-HHHHHHHHHTSCTTTEE-EEEEESSCHHH
T ss_pred cchhhcc-cCC---------CEecHHH-hCCC-EEEEEEEcCcCHHHHHH-HHHHHHHHHHhccCCeE-EEEEECCChHH
Confidence 4566553 454 8999999 5998 67778999999999999 99999999999888998 99999999999
Q ss_pred HHHHHHHhCCCCceEEEeeCC---chHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCcccCCHHHHH
Q 028808 125 MNGWAEKLQAKDVIEFYGDFD---GSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKMKVSGGDVIL 200 (203)
Q Consensus 125 ~~~~~~~~~l~~~fpllsD~~---~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~~~~~a~~vL 200 (203)
+++|+++++++ ||++.|.+ ..+++.||... ...|++|||| +|+|++.+.+. .+.++.++.|
T Consensus 71 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v---------~~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l 135 (151)
T 3raz_A 71 IGNFLKQTPVS--YPIWRYTGANSRNFMKTYGNTV---------GVLPFTVVEAPKCGYRQTITGE----VNEKSLTDAV 135 (151)
T ss_dssp HHHHHHHSCCS--SCEEEECCSCHHHHHHTTTCCS---------CCSSEEEEEETTTTEEEECCSC----CCHHHHHHHH
T ss_pred HHHHHHHcCCC--CceEecCccchHHHHHHhCCcc---------CCCCEEEEECCCCcEEEEECCC----CCHHHHHHHH
Confidence 99999999996 99999873 45788888321 1358899999 99999998754 2334555555
Q ss_pred hc
Q 028808 201 GQ 202 (203)
Q Consensus 201 ~~ 202 (203)
++
T Consensus 136 ~~ 137 (151)
T 3raz_A 136 KL 137 (151)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 89
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.89 E-value=1.7e-23 Score=162.40 Aligned_cols=134 Identities=15% Similarity=0.242 Sum_probs=111.6
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
...++|++ +|+|++.+.+| +.++|++ ++|| ++|+.||++|||+|..+ ++.|.+++++|+ ++.
T Consensus 9 ~~~~~g~~----~p~~~l~~~~g---------~~~~l~~-~~gk-~~lv~F~~~~C~~C~~~-~~~l~~l~~~~~--~v~ 70 (165)
T 3ha9_A 9 HSEEVLER----EASFSLTTIDG---------EVISLNN-VGGD-VVILWFMAAWCPSCVYM-ADLLDRLTEKYR--EIS 70 (165)
T ss_dssp HHHHHHHH----HHCCCEEBTTS---------CEECGGG-CCSS-EEEEEEECTTCTTHHHH-HHHHHHHHHHCT--TEE
T ss_pred ccccccCc----CCCCEeecCCC---------CEeeHHH-hCCC-EEEEEEECCCCcchhhh-HHHHHHHHHHcC--CcE
Confidence 35678999 59999999886 8999999 5998 66778899999999999 999999999997 788
Q ss_pred EEEEEecC-------------------CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEE
Q 028808 113 SVICVAVN-------------------DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAY 173 (203)
Q Consensus 113 ~vi~IS~d-------------------~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfI 173 (203)
|++|+.| ++...++|.++++++ +||++.| +.++++.||+.. .|++||
T Consensus 71 -vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d-~~~~~~~~~v~~-----------~P~~~l 136 (165)
T 3ha9_A 71 -VIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDP-SWIMVMD-DGSLVEKFNVRS-----------IDYIVI 136 (165)
T ss_dssp -EEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCT-TSEEEEC-CSHHHHHTTCCS-----------SSEEEE
T ss_pred -EEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCC-CeeEEeC-hHHHHHHhCCCC-----------ceEEEE
Confidence 9999997 678899999999994 4999999 999999999853 478999
Q ss_pred Ee-CCEEEEEEeecCCCCcccCCHHHHHhcC
Q 028808 174 VE-DGRIKALNVEEAPSKMKVSGGDVILGQI 203 (203)
Q Consensus 174 Id-dG~I~~~~~~~~~~~~~~~~a~~vL~~l 203 (203)
|| +|+|++ .+..+ +.+..++.|++|
T Consensus 137 id~~G~i~~--~g~~~---~~~~l~~~l~~l 162 (165)
T 3ha9_A 137 MDKSSNVLY--AGTTP---SLGELESVIKSV 162 (165)
T ss_dssp EETTCCEEE--EEESC---CHHHHHHHHHHC
T ss_pred EcCCCcEEE--eCCCC---CHHHHHHHHHHH
Confidence 99 999999 44321 245555665543
No 90
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.88 E-value=2.6e-23 Score=161.60 Aligned_cols=134 Identities=16% Similarity=0.186 Sum_probs=109.2
Q ss_pred ccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCC-CCccchhhHHHhHHHHHHc--
Q 028808 33 ASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGV-CSNQHVPSYKNNIDKFKAK-- 109 (203)
Q Consensus 33 ~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~-C~~ehl~~l~~~~~~f~~~-- 109 (203)
....+|++ +|+|++++.+ + .++|++ ++|| +||++||++|||+ |..+ +|.|++++++|+++
T Consensus 8 ~~~~~G~~----~p~f~l~~~~---------g-~~~l~~-~~gk-~vll~f~~~~C~~~C~~~-~~~l~~~~~~~~~~~~ 70 (172)
T 2k6v_A 8 GTRLLNPK----PVDFALEGPQ---------G-PVRLSQ-FQDK-VVLLFFGFTRCPDVCPTT-LLALKRAYEKLPPKAQ 70 (172)
T ss_dssp SEEEEEEE----ECCCEEECSS---------S-EEEGGG-STTS-EEEEEEECTTCSSHHHHH-HHHHHHHHTTSCHHHH
T ss_pred cccccCCC----CCCeEEEcCC---------C-CCcHHH-hCCC-EEEEEEECCCCcchhHHH-HHHHHHHHHHhhhhcc
Confidence 34557888 5999999875 3 799999 5998 6778899999997 9999 99999999999876
Q ss_pred -CCcEEEEEecC----CHHHHHHHHHHhCCCCceEEEeeCC---chHHHHcCCccccccc----cCCCCcceEEEEEeCC
Q 028808 110 -GIDSVICVAVN----DPYVMNGWAEKLQAKDVIEFYGDFD---GSFHKSLDLGKDLSAA----LLGPRSERWSAYVEDG 177 (203)
Q Consensus 110 -gv~~vi~IS~d----~~~~~~~~~~~~~l~~~fpllsD~~---~~v~~~yGv~~~~~~~----g~~~~~~r~tfIIddG 177 (203)
+++ |++||.| +++.+++|+++++++ |++++|.+ .+++++||+....... ..+....|++||||+|
T Consensus 71 ~~v~-vv~is~d~~~d~~~~~~~~~~~~~~~--~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G 147 (172)
T 2k6v_A 71 ERVQ-VIFVSVDPERDPPEVADRYAKAFHPS--FLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEG 147 (172)
T ss_dssp TTEE-EEEEESCTTTCCHHHHHHHHHHHCTT--EEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETT
T ss_pred CCEE-EEEEEECCCCCCHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEECC
Confidence 788 9999976 568899999999986 99999998 7899999997532210 0111245889999999
Q ss_pred EEEEEEeec
Q 028808 178 RIKALNVEE 186 (203)
Q Consensus 178 ~I~~~~~~~ 186 (203)
+|++++.+.
T Consensus 148 ~i~~~~~g~ 156 (172)
T 2k6v_A 148 RLVLLYSPD 156 (172)
T ss_dssp EEEEEECHH
T ss_pred EEEEEECCC
Confidence 999998765
No 91
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.1e-23 Score=165.26 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=85.7
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC----
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN---- 120 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d---- 120 (203)
+|+|+++|.+| ++++|++ ++|| +||++||++|||+|. + +|.|++++++|+++|+. |++||.|
T Consensus 12 ~~~f~l~d~~G---------~~~~l~~-~~Gk-~vll~F~a~wC~~C~-~-~~~l~~l~~~~~~~~v~-vv~vs~d~~~~ 77 (171)
T 3cmi_A 12 FYKLAPVDKKG---------QPFPFDQ-LKGK-VVLIVNVASKCGFTP-Q-YKELEALYKRYKDEGFT-IIGFPCNQFGH 77 (171)
T ss_dssp GGGCCCBBTTS---------CBCCGGG-GTTC-EEEEEEEESSSCCHH-H-HHHHHHHHHHHGGGTEE-EEEEEECSCC-
T ss_pred eeeeEEEcCCC---------CEecHHH-cCCC-EEEEEEEecCCCcch-h-HHHHHHHHHHhccCCeE-EEEEECcccCC
Confidence 69999999986 8999999 5998 567789999999999 9 99999999999999998 9999984
Q ss_pred ----CHHHHHHHH-HHhCCCCceEEEeeCC--ch-HHH--------HcCCccccccccCCCCcceEEEEEe-CCEEEEEE
Q 028808 121 ----DPYVMNGWA-EKLQAKDVIEFYGDFD--GS-FHK--------SLDLGKDLSAALLGPRSERWSAYVE-DGRIKALN 183 (203)
Q Consensus 121 ----~~~~~~~~~-~~~~l~~~fpllsD~~--~~-v~~--------~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~ 183 (203)
+++.+++|+ ++++++ ||+++|.+ +. ..+ .||+...+. ....|++|||| +|+|++++
T Consensus 78 ~~~d~~~~~~~~~~~~~~~~--~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~-----i~~~~~~~lid~~G~i~~~~ 150 (171)
T 3cmi_A 78 QEPGSDEEIAQFCQLNYGVT--FPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRG-----IKWNFEKFLVDKKGKVYERY 150 (171)
T ss_dssp -----------------CCC--SCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCS-----CCSTTCEEEECSSSCEEEEE
T ss_pred CCCCCHHHHHHHHHhccCCC--ceEEeeccCCCccchHHHHHHHhccCCcCCCCc-----ccccceEEEECCCCCEEEEe
Confidence 556788999 999996 99999753 33 222 344432100 01123899999 99999998
Q ss_pred eec
Q 028808 184 VEE 186 (203)
Q Consensus 184 ~~~ 186 (203)
.+.
T Consensus 151 ~g~ 153 (171)
T 3cmi_A 151 SSL 153 (171)
T ss_dssp CTT
T ss_pred CCC
Confidence 753
No 92
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.88 E-value=6e-23 Score=154.88 Aligned_cols=121 Identities=12% Similarity=0.170 Sum_probs=105.5
Q ss_pred ccCCCccccCCCceEE--eccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc
Q 028808 35 VAVGSDIVSAAQDVSL--QKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID 112 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l--~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~ 112 (203)
+++|++ +|+|++ .+.+| +.+++++ ++||+ +|+.||++|||+|..+ ++.|++++++|+++ +.
T Consensus 1 l~~g~~----~P~f~~~~~~~~g---------~~~~~~~-~~gk~-~lv~f~~~~C~~C~~~-~~~l~~l~~~~~~~-~~ 63 (148)
T 2b5x_A 1 MKLRQP----MPELTGEKAWLNG---------EVTREQL-IGEKP-TLIHFWSISCHLCKEA-MPQVNEFRDKYQDQ-LN 63 (148)
T ss_dssp CCTTCB----CCCCCCCSEEESC---------CCCHHHH-TTTSC-EEEEEECTTCHHHHHH-HHHHHHHHHHHTTT-SE
T ss_pred CCCCCC----CCCCccccccccC---------cccchhh-cCCCE-EEEEEEcCCCHHHHHH-hHHHHHHHHHhcCC-cE
Confidence 467888 699999 56665 7899999 48884 6667899999999999 99999999999877 88
Q ss_pred EEEEEecC------CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 113 SVICVAVN------DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 113 ~vi~IS~d------~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+++|+.| ++...++|.++++++ ||++.|.+.++++.||+.. .|++|||| +|+|++.+.+
T Consensus 64 -~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g 129 (148)
T 2b5x_A 64 -VVAVHMPRSEDDLDPGKIKETAAEHDIT--QPIFVDSDHALTDAFENEY-----------VPAYYVFDKTGQLRHFQAG 129 (148)
T ss_dssp -EEEEECCCSTTTSSHHHHHHHHHHTTCC--SCEEECSSCHHHHHTCCCC-----------SSEEEEECTTCBEEEEEES
T ss_pred -EEEEEcCCCccccCHHHHHHHHHHcCCC--cceEECCchhHHHHhCCCC-----------CCEEEEECCCCcEEEEecC
Confidence 9999987 578899999999996 9999999999999999853 47899999 9999999876
Q ss_pred c
Q 028808 186 E 186 (203)
Q Consensus 186 ~ 186 (203)
.
T Consensus 130 ~ 130 (148)
T 2b5x_A 130 G 130 (148)
T ss_dssp C
T ss_pred C
Confidence 4
No 93
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.88 E-value=1.8e-22 Score=157.02 Aligned_cols=125 Identities=15% Similarity=0.197 Sum_probs=103.8
Q ss_pred ccccccccCCCccccCCCceEEecc--ccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHH
Q 028808 29 SRAYASVAVGSDIVSAAQDVSLQKA--RTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKF 106 (203)
Q Consensus 29 ~~~~~~~~~G~~~~~~APdf~l~~~--~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f 106 (203)
......+.+|++ +|+|++++. +| +.+++.++.+|| ++|++||++|||+|..+ +|.|++++++
T Consensus 16 ~~~~~~~~~G~~----~P~f~l~~~~~~g---------~~~~~~~~~~gk-~vll~F~a~~C~~C~~~-~~~l~~l~~~- 79 (168)
T 2b1k_A 16 PTNLESALIGKP----VPKFRLESLDNPG---------QFYQADVLTQGK-PVLLNVWATWCPTCRAE-HQYLNQLSAQ- 79 (168)
T ss_dssp ---CCCTTTTSB----CCCCEEEESSSTT---------CEEEGGGGCCSS-CEEEEEECTTCHHHHHH-HHHHHHHHHT-
T ss_pred cccccccccCCc----CCCeEeecccCCC---------cEeehhHhcCCC-EEEEEEECCCCHHHHHH-HHHHHHHHHC-
Confidence 444567889999 699999998 54 789998855888 56677889999999999 8999887654
Q ss_pred HHcCCcEEEEEecC-CHHHHHHHHHHhCCCCceE-EEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEE
Q 028808 107 KAKGIDSVICVAVN-DPYVMNGWAEKLQAKDVIE-FYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALN 183 (203)
Q Consensus 107 ~~~gv~~vi~IS~d-~~~~~~~~~~~~~l~~~fp-llsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~ 183 (203)
|+. +++|+.| ++...++|.++++++ |+ ++.|.+.++++.||+.. .|++|||| +|+|++.+
T Consensus 80 ---~v~-vv~v~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~ 142 (168)
T 2b1k_A 80 ---GIR-VVGMNYKDDRQKAISWLKELGNP--YALSLFDGDGMLGLDLGVYG-----------APETFLIDGNGIIRYRH 142 (168)
T ss_dssp ---TCC-EEEEEESCCHHHHHHHHHHHCCC--CSEEEEETTCHHHHHHTCCS-----------SSEEEEECTTSBEEEEE
T ss_pred ---CCE-EEEEECCCChHHHHHHHHHcCCC--CceeeECcchHHHHHcCccc-----------cCEEEEECCCCeEEEEE
Confidence 898 9999975 467899999999997 77 68899999999999853 47899999 99999998
Q ss_pred eec
Q 028808 184 VEE 186 (203)
Q Consensus 184 ~~~ 186 (203)
.+.
T Consensus 143 ~g~ 145 (168)
T 2b1k_A 143 AGD 145 (168)
T ss_dssp ESC
T ss_pred eCC
Confidence 864
No 94
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.88 E-value=2.4e-22 Score=149.73 Aligned_cols=112 Identities=13% Similarity=0.165 Sum_probs=99.5
Q ss_pred CCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-H
Q 028808 44 AAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-P 122 (203)
Q Consensus 44 ~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~ 122 (203)
+||+|++++.+| +.++++++ +||+ +|+.||++|||+|..+ ++.|+++++++. ++. +++|+.|+ +
T Consensus 3 ~~p~~~l~~~~g---------~~~~l~~~-~~k~-~lv~f~~~~C~~C~~~-~~~l~~~~~~~~--~~~-~~~v~~~~~~ 67 (136)
T 1lu4_A 3 ERLQFTATTLSG---------APFDGASL-QGKP-AVLWFWTPWCPFCNAE-APSLSQVAAANP--AVT-FVGIATRADV 67 (136)
T ss_dssp GGGCCEEEBTTS---------CEEEGGGG-TTSC-EEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEECSSCH
T ss_pred CCCCeEeecCCC---------CeecHHHh-CCCE-EEEEEECCcChhHHHH-HHHHHHHHHHCC--CcE-EEEEEcCCCH
Confidence 479999999886 89999994 9985 5667889999999999 999999999987 788 99999987 7
Q ss_pred HHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEe
Q 028808 123 YVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 123 ~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
...++|.++++++ ||++.|.+.++++.||+.. .|+++||| +|+|+ .+.
T Consensus 68 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~i~~-----------~P~~~lid~~G~i~-~~~ 116 (136)
T 1lu4_A 68 GAMQSFVSKYNLN--FTNLNDADGVIWARYNVPW-----------QPAFVFYRADGTST-FVN 116 (136)
T ss_dssp HHHHHHHHHHTCC--SEEEECTTSHHHHHTTCCS-----------SSEEEEECTTSCEE-EEC
T ss_pred HHHHHHHHHcCCC--ceEEECCchhHHHhcCCCC-----------CCEEEEECCCCcEE-EEE
Confidence 8899999999996 9999999999999999853 47899999 99999 666
No 95
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.88 E-value=1.3e-22 Score=178.48 Aligned_cols=125 Identities=18% Similarity=0.185 Sum_probs=111.3
Q ss_pred cccccCCCccccCCCceE-----EeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHH
Q 028808 32 YASVAVGSDIVSAAQDVS-----LQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKF 106 (203)
Q Consensus 32 ~~~~~~G~~~~~~APdf~-----l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f 106 (203)
...+++|++ ||+|+ +.+.+| +.++|++ ++|| +||++||++|||+|..+ +|.|++++++|
T Consensus 48 ~~~l~vG~~----aPdF~~~~~wL~d~dG---------~~vsLsd-l~GK-~vLl~F~atwC~~C~~~-~p~L~~l~~~~ 111 (352)
T 2hyx_A 48 AAQLESCGT----APDLKGITGWLNTPGN---------KPIDLKS-LRGK-VVLIDFWAYSCINCQRA-IPHVVGWYQAY 111 (352)
T ss_dssp CSSCCCCCB----CCCCCSCCEEESSGGG---------CCCCGGG-GTTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHH
T ss_pred ccccCCCCc----CCCccccccccCCCCC---------CEEcHHH-hCCC-EEEEEEECCCChhHHHH-HHHHHHHHHHh
Confidence 346889999 69999 888876 8999999 5998 57778999999999999 99999999999
Q ss_pred HHcCCcEEEEEecC------CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEE
Q 028808 107 KAKGIDSVICVAVN------DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRI 179 (203)
Q Consensus 107 ~~~gv~~vi~IS~d------~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I 179 (203)
+++|+. ||+|+.| +++.+++|+++++++ ||++.|.+.++++.|++.. .|++|||| +|+|
T Consensus 112 ~~~~v~-vi~Vs~d~~~~~d~~~~~~~~~~~~~l~--fpv~~D~~~~l~~~ygV~~-----------~Pt~~lID~~G~I 177 (352)
T 2hyx_A 112 KDSGLA-VIGVHTPEYAFEKVPGNVAKGAANLGIS--YPIALDNNYATWTNYRNRY-----------WPAEYLIDATGTV 177 (352)
T ss_dssp GGGTEE-EEEEECCSSGGGGCHHHHHHHHHHHTCC--SCEEECTTSHHHHHTTCCE-----------ESEEEEECTTSBE
T ss_pred hcCCeE-EEEEECCcccccCCHHHHHHHHHHcCCC--ccEEeCCcHHHHHHcCCCc-----------cCEEEEEeCCCeE
Confidence 998998 9999975 578899999999996 9999999999999999853 57899999 9999
Q ss_pred EEEEeec
Q 028808 180 KALNVEE 186 (203)
Q Consensus 180 ~~~~~~~ 186 (203)
++.+.+.
T Consensus 178 v~~~~G~ 184 (352)
T 2hyx_A 178 RHIKFGE 184 (352)
T ss_dssp EEEEESB
T ss_pred EEEEcCC
Confidence 9999864
No 96
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.88 E-value=8.7e-23 Score=156.20 Aligned_cols=130 Identities=14% Similarity=0.195 Sum_probs=110.1
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcE
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDS 113 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~ 113 (203)
.+++|++ +|+|++++.+| +.++++++ + | ++|++||++|||+|..+ ++.|.++++++ +++
T Consensus 4 ~l~~g~~----~p~f~l~~~~g---------~~~~l~~~-~-k-~vll~f~~~~C~~C~~~-~~~l~~l~~~~---~v~- 62 (154)
T 3ia1_A 4 AVKPGEP----LPDFLLLDPKG---------QPVTPATV-S-K-PAVIVFWASWCTVCKAE-FPGLHRVAEET---GVP- 62 (154)
T ss_dssp CCCSBEE----CCCCCEECTTS---------CEECTTTS-C-S-SEEEEEECTTCHHHHHH-HHHHHHHHHHH---CCC-
T ss_pred cCCCCCc----CCceEEECCCC---------CEechHHc-C-C-eEEEEEEcccChhHHHH-HHHHHHHHHHc---CCe-
Confidence 5889999 69999999876 89999994 7 7 56677899999999999 99999999999 798
Q ss_pred EEEEec---CCHHHHHHHHHHhCCCCceEEEee---CCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 114 VICVAV---NDPYVMNGWAEKLQAKDVIEFYGD---FDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 114 vi~IS~---d~~~~~~~~~~~~~l~~~fpllsD---~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+++|+. +++...++|.++++++ ||++.| .+.++++.||+.. .|++|||| +|+|++.+.+.
T Consensus 63 ~v~v~~d~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~ 129 (154)
T 3ia1_A 63 FYVISREPRDTREVVLEYMKTYPRF--IPLLASDRDRPHEVAARFKVLG-----------QPWTFVVDREGKVVALFAGR 129 (154)
T ss_dssp EEEEECCTTCCHHHHHHHHTTCTTE--EECBCCSSCCHHHHHTTSSBCS-----------SCEEEEECTTSEEEEEEESB
T ss_pred EEEEeCCCcccHHHHHHHHHHcCCC--cccccccccchHHHHHHhCCCc-----------ccEEEEECCCCCEEEEEcCC
Confidence 999999 7788999999999995 999999 7889999998852 47899999 99999998764
Q ss_pred CCCCcccCCHHHHHh
Q 028808 187 APSKMKVSGGDVILG 201 (203)
Q Consensus 187 ~~~~~~~~~a~~vL~ 201 (203)
. +.++.++.|+
T Consensus 130 ~----~~~~l~~~l~ 140 (154)
T 3ia1_A 130 A----GREALLDALL 140 (154)
T ss_dssp C----CHHHHHHHHH
T ss_pred C----CHHHHHHHHH
Confidence 2 2344455544
No 97
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.88 E-value=1.7e-22 Score=149.55 Aligned_cols=129 Identities=16% Similarity=0.240 Sum_probs=105.7
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEE------e
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICV------A 118 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~I------S 118 (203)
||+|++++.+| +.+++++ ++|| ++|+.||++|||+|..+ ++.|+++++++ ..++. +++| +
T Consensus 2 ~p~f~l~~~~g---------~~~~l~~-~~gk-~~lv~f~~~~C~~C~~~-~~~l~~~~~~~-~~~~~-~v~i~~~~~~~ 67 (138)
T 4evm_A 2 VADFELMGVDG---------KTYRLSD-YKGK-KVYLKFWASWCSICLAS-LPDTDEIAKEA-GDDYV-VLTVVSPGHKG 67 (138)
T ss_dssp CCCCEEEBTTS---------CEEEGGG-GTTS-EEEEEECCTTCHHHHHH-HHHHHHHHHTC-TTTEE-EEEEECTTSTT
T ss_pred CCcceeECCCC---------CEEEHHH-hCCC-EEEEEEEcCcCHHHHHH-HHHHHHHHHHh-CCCcE-EEEEEcCCCCc
Confidence 79999999876 8999999 5998 56778899999999999 99999999884 44677 8888 3
Q ss_pred cCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCcccCCHH
Q 028808 119 VNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKMKVSGGD 197 (203)
Q Consensus 119 ~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~~~~~a~ 197 (203)
.++....++|.+++++. +||++.|.+.++++.||+.. .|++|||| +|+|++.+.+.. +.++..
T Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~~----~~~~l~ 131 (138)
T 4evm_A 68 EQSEADFKNWYKGLDYK-NLPVLVDPSGKLLETYGVRS-----------YPTQAFIDKEGKLVKTHPGFM----EKDAIL 131 (138)
T ss_dssp CCCHHHHHHHHTTCCCT-TCCEEECTTCHHHHHTTCCS-----------SSEEEEECTTCCEEEEEESCC----CHHHHH
T ss_pred hhhHHHHHHHHhhcCCC-CeeEEECcchHHHHHcCccc-----------CCeEEEECCCCcEEEeecCCC----cHHHHH
Confidence 45677899999999984 49999999999999999853 47899999 999999987542 234555
Q ss_pred HHHhcC
Q 028808 198 VILGQI 203 (203)
Q Consensus 198 ~vL~~l 203 (203)
+.|++|
T Consensus 132 ~~l~~l 137 (138)
T 4evm_A 132 QTLKEL 137 (138)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 555543
No 98
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.86 E-value=1.8e-21 Score=144.44 Aligned_cols=114 Identities=16% Similarity=0.213 Sum_probs=99.4
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-HH
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-PY 123 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~~ 123 (203)
+|+|++++.+| +.++++++ +||+ +|+.||++|||+|..+ ++.+++++++++ ++. +++|+.|+ ..
T Consensus 5 ~p~~~~~~~~g---------~~~~l~~~-~~k~-~ll~f~~~~C~~C~~~-~~~l~~~~~~~~--~~~-~~~v~~~~~~~ 69 (136)
T 1zzo_A 5 QLQFSAKTLDG---------HDFHGESL-LGKP-AVLWFWAPWCPTCQGE-APVVGQVAASHP--EVT-FVGVAGLDQVP 69 (136)
T ss_dssp GGCCEEEBTTS---------CEEEGGGG-TTSC-EEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEECSSCHH
T ss_pred CCCcccccCCC---------CEeeHHHh-CCCe-EEEEEEcCCChhHHHH-HHHHHHHHHHcC--CeE-EEEEeCCCCHH
Confidence 69999999886 89999994 9985 5667889999999999 999999999987 788 99999875 68
Q ss_pred HHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 124 VMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 124 ~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
..++|.++++++ +||++.|.+.++++.||+.. .|+++||| +|+|+ .+.+.
T Consensus 70 ~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~i~~-----------~P~~~~id~~g~i~-~~~g~ 120 (136)
T 1zzo_A 70 AMQEFVNKYPVK-TFTQLADTDGSVWANFGVTQ-----------QPAYAFVDPHGNVD-VVRGR 120 (136)
T ss_dssp HHHHHHHHTTCT-TSEEEECTTCHHHHHTTCCS-----------SSEEEEECTTCCEE-EEESC
T ss_pred HHHHHHHHcCCC-ceEEEEcCCcHHHHHcCCCC-----------CceEEEECCCCCEE-EEecC
Confidence 899999999994 49999999999999999853 47899999 99999 66553
No 99
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.85 E-value=8.6e-21 Score=149.88 Aligned_cols=142 Identities=11% Similarity=0.113 Sum_probs=103.7
Q ss_pred CCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCC-CCCccchhhHHHhHHHHHHcC--CcE
Q 028808 37 VGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTG-VCSNQHVPSYKNNIDKFKAKG--IDS 113 (203)
Q Consensus 37 ~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp-~C~~ehl~~l~~~~~~f~~~g--v~~ 113 (203)
+|.+ +|+|+|+|.+| ++++|++ ++|| +||++||.+||| +|..+ ++.|.++++++++.| +.
T Consensus 8 ~~~~----~PdF~L~d~~G---------~~v~l~d-~~Gk-~vll~F~~t~Cp~~Cp~~-~~~l~~l~~~~~~~~~~v~- 70 (170)
T 4hde_A 8 LNWD----LETFQFTNQDG---------KPFGTKD-LKGK-VWVADFMFTNCQTVCPPM-TANMAKLQKMAKEEKLDVQ- 70 (170)
T ss_dssp CCBC----CCCCEEECTTS---------CEEEHHH-HTTS-CEEEEEECTTCSSSHHHH-HHHHHHHHHHHHHTTCCCE-
T ss_pred CCCc----CCCcEEECCCC---------CEEeHHH-hCCC-EEEEEEECCCCCCcccHH-HHHHHHHHHhhhcccccce-
Confidence 5777 69999999986 8999999 5998 577789999998 79999 999999999998765 65
Q ss_pred EEEEecC----CHHHHHHHHHHhCCC-CceEEEeeCCchH-----HHHcCCccccccccCCCCcceEEEEEe-CCEEEEE
Q 028808 114 VICVAVN----DPYVMNGWAEKLQAK-DVIEFYGDFDGSF-----HKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKAL 182 (203)
Q Consensus 114 vi~IS~d----~~~~~~~~~~~~~l~-~~fpllsD~~~~v-----~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~ 182 (203)
+|+||.| +++.+++|+++++.. .++.++.+.+.+. ...|+........+ ...-.+++|||| +|+|+..
T Consensus 71 ~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~-~~~H~~~~~liD~~G~i~~~ 149 (170)
T 4hde_A 71 FVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENG-QVIHGTSFYLIDQNGKVMKK 149 (170)
T ss_dssp EEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTS-CCBCCCEEEEECTTSCEEEE
T ss_pred eEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCc-eEEeeeEEEEEcCCCeEEEE
Confidence 8889875 578899999998863 1577888765432 23355544322111 111135789999 9999998
Q ss_pred EeecCCCCcccCCHHHHHh
Q 028808 183 NVEEAPSKMKVSGGDVILG 201 (203)
Q Consensus 183 ~~~~~~~~~~~~~a~~vL~ 201 (203)
+.+... .+.+++++
T Consensus 150 ~~g~~~-----~~~~~l~~ 163 (170)
T 4hde_A 150 YSGISN-----TPYEDIIR 163 (170)
T ss_dssp EESSSS-----CCHHHHHH
T ss_pred ECCCCC-----CCHHHHHH
Confidence 876432 34555544
No 100
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.84 E-value=8.5e-22 Score=149.48 Aligned_cols=121 Identities=13% Similarity=0.141 Sum_probs=102.4
Q ss_pred CCCccccCCCc-eEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH-cCCcEE
Q 028808 37 VGSDIVSAAQD-VSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA-KGIDSV 114 (203)
Q Consensus 37 ~G~~~~~~APd-f~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~-~gv~~v 114 (203)
+|+. +|+ |++++.+| +.++|++ ++|| +||++||++|||+|..+ +|.|+++++++++ .++. |
T Consensus 3 ~~~~----~P~~f~l~~~~g---------~~~~l~~-~~gk-~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~-v 65 (144)
T 1i5g_A 3 LKKF----FPYSTNVLKGAA---------ADIALPS-LAGK-TVFFYFSASWCPPSRAF-TPQLIDFYKAHAEKKNFE-V 65 (144)
T ss_dssp TTTS----CSSCSEEEETTE---------EEEEGGG-GTTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHTTTTTEE-E
T ss_pred hhhh----CCCceEEEcCCC---------CEecHHH-cCCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHhccCCCEE-E
Confidence 4566 699 99999986 8999999 4998 57788999999999999 9999999999985 6888 9
Q ss_pred EEEecCC-HHHHHHHHHHhCCCCceEEEe-eCCchHHHHcCCccccccccCCCCcceEEEEEe--CCEEEEEEeec
Q 028808 115 ICVAVND-PYVMNGWAEKLQAKDVIEFYG-DFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE--DGRIKALNVEE 186 (203)
Q Consensus 115 i~IS~d~-~~~~~~~~~~~~l~~~fplls-D~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId--dG~I~~~~~~~ 186 (203)
++|+.|+ ....++|.+++++. +||++. |.+.+++++||+.. .|++|||| +|+|++.+...
T Consensus 66 v~v~~d~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~~G~i~~~~~~~ 129 (144)
T 1i5g_A 66 MLISWDESAEDFKDYYAKMPWL-ALPFEDRKGMEFLTTGFDVKS-----------IPTLVGVEADSGNIITTQART 129 (144)
T ss_dssp EEEECCSSHHHHHHHHTTCSSE-ECCTTCHHHHHHHHHHTTCCS-----------SSEEEEEETTTCCEEESCHHH
T ss_pred EEEeCCCCHHHHHHHHHhCCcc-ccccCchHHHHHHHHHcCCCC-----------CCEEEEEECCCCcEEeccchh
Confidence 9999984 67889999998864 477776 66789999999853 47899998 89999987553
No 101
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.83 E-value=1.6e-21 Score=150.33 Aligned_cols=133 Identities=13% Similarity=0.171 Sum_probs=105.4
Q ss_pred ccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEE
Q 028808 35 VAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSV 114 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~v 114 (203)
..+|+. +| ++++.+| +.+++++ ++|| ++|++||++|||+|..+ +|.|++++++|+..|++ |
T Consensus 14 ~~~~~~----~p--~l~~~~g---------~~~~~~~-~~gk-~vlv~F~a~~C~~C~~~-~~~l~~l~~~~~~~~~~-v 74 (164)
T 2h30_A 14 ATVPHT----MS--TMKTADN---------RPASVYL-KKDK-PTLIKFWASWCPLCLSE-LGQAEKWAQDAKFSSAN-L 74 (164)
T ss_dssp CCHHHH----HT--TCEETTS---------SBGGGGC-CTTS-CEEEEECCTTCHHHHHH-HHHHHHHHTCGGGTTSE-E
T ss_pred cccCCc----CC--ccCCCCC---------CEeeHHH-hCCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHcccCCcE-E
Confidence 344555 36 6777775 7899999 5998 46677899999999999 99999999999999998 9
Q ss_pred EEEecC------CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecC
Q 028808 115 ICVAVN------DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEA 187 (203)
Q Consensus 115 i~IS~d------~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~ 187 (203)
|+|+.| +....++|.++++++ .+++..|.+.++++.||+.. .|++|||| +|+|++.+.+..
T Consensus 75 v~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~g~~ 142 (164)
T 2h30_A 75 ITVASPGFLHEKKDGEFQKWYAGLNYP-KLPVVTDNGGTIAQNLNISV-----------YPSWALIGKDGDVQRIVKGSI 142 (164)
T ss_dssp EEEECTTSTTCCCTTHHHHHHTTSCCT-TSCEEECTTCHHHHHTTCCS-----------SSEEEEECTTSCEEEEEESCC
T ss_pred EEEEcCCCccccCHHHHHHHHHhCCCC-cceEEEcCchHHHHHcCCCc-----------cceEEEECCCCcEEEEEcCCC
Confidence 999975 345678888887875 48999999999999999853 47899999 999999987632
Q ss_pred CCCcccCCHHHHHhc
Q 028808 188 PSKMKVSGGDVILGQ 202 (203)
Q Consensus 188 ~~~~~~~~a~~vL~~ 202 (203)
+.++.++.|+.
T Consensus 143 ----~~~~l~~~i~~ 153 (164)
T 2h30_A 143 ----NEAQALALIRN 153 (164)
T ss_dssp ----CHHHHHHHHHC
T ss_pred ----CHHHHHHHHHH
Confidence 23445555443
No 102
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.72 E-value=3.9e-22 Score=150.32 Aligned_cols=120 Identities=13% Similarity=0.179 Sum_probs=99.7
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH--cCCcEEEEEecCC-
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA--KGIDSVICVAVND- 121 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~--~gv~~vi~IS~d~- 121 (203)
+|+|++++.+| +.++|++.++||+++|++||++|||+|..+ +|.|++++++|++ .++. +++|+.|+
T Consensus 4 ~p~~~l~~~~g---------~~~~l~~~~~gk~~vll~F~a~wC~~C~~~-~~~l~~~~~~~~~~~~~~~-v~~v~~d~~ 72 (143)
T 2lus_A 4 IQGIKLVKKNR---------CEVNANEALKDKDIIGFYFSAHWCPPCRGF-TPILADMYSELVDDSAPFE-IIFVSSDRS 72 (143)
Confidence 69999999886 899999944888467788999999999999 9999999999953 5788 99999985
Q ss_pred HHHHHHHHHHhCCCC-ceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 122 PYVMNGWAEKLQAKD-VIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 122 ~~~~~~~~~~~~l~~-~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
++..++|+++++++. .+++..|.+.+++++||+.. .|++|||| +|+|++.+...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-----------~P~~~lid~~G~i~~~~~~~ 128 (143)
T 2lus_A 73 EDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITG-----------IPALVIVKKDGTLISMNGRG 128 (143)
Confidence 467889999998741 35666777889999999853 47789999 99999996543
No 103
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.82 E-value=6.6e-21 Score=145.50 Aligned_cols=131 Identities=13% Similarity=0.112 Sum_probs=98.9
Q ss_pred ccccccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC
Q 028808 31 AYASVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG 110 (203)
Q Consensus 31 ~~~~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g 110 (203)
+...+.+|++ +|+|++++.+|...+ ..+.+.+++++ ++||+ +|++||++|||+|..+ ++.|++++++ .+
T Consensus 4 ~~~~~~~g~~----~p~f~l~~~~g~~~~-~~~~~~~~l~~-~~gk~-~ll~f~~~~C~~C~~~-~~~l~~l~~~---~~ 72 (156)
T 1kng_A 4 RIPSALIGRP----APQTALPPLEGLQAD-NVQVPGLDPAA-FKGKV-SLVNVWASWCVPCHDE-APLLTELGKD---KR 72 (156)
T ss_dssp --------CB----CCCCCBCCCTTCEET-TEECCCBCGGG-GTTSC-EEEEEECTTCHHHHHH-HHHHHHHTTC---TT
T ss_pred chhhHHhCCC----CCCceeeeccCcccc-cccCceechHH-hCCCE-EEEEEEcccCHhHHHH-HHHHHHHHhc---CC
Confidence 4456789999 699999998640000 00016799999 48884 5678999999999999 8999988765 34
Q ss_pred CcEEEEEecC-CHHHHHHHHHHhCCCCceE-EEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 111 IDSVICVAVN-DPYVMNGWAEKLQAKDVIE-FYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 111 v~~vi~IS~d-~~~~~~~~~~~~~l~~~fp-llsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+. +++|+.+ ++...++|.++++++ || ++.|.+.++++.||+.. .|++|||| +|+|++.+.+.
T Consensus 73 v~-~v~v~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~~-----------~P~~~~id~~G~i~~~~~g~ 137 (156)
T 1kng_A 73 FQ-LVGINYKDAADNARRFLGRYGNP--FGRVGVDANGRASIEWGVYG-----------VPETFVVGREGTIVYKLVGP 137 (156)
T ss_dssp SE-EEEEEESCCHHHHHHHHHHHCCC--CSEEEEETTSHHHHHTTCCS-----------SCEEEEECTTSBEEEEEESC
T ss_pred eE-EEEEECCCCHHHHHHHHHHcCCC--CceeeeCchhHHHHhcCcCc-----------cCeEEEEcCCCCEEEEEeCC
Confidence 88 9999976 467899999999996 88 89999999999999853 47799999 99999988764
No 104
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.82 E-value=9.2e-22 Score=154.19 Aligned_cols=132 Identities=16% Similarity=0.201 Sum_probs=101.9
Q ss_pred cccccccccccccCCCccccCCCce-EEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHh
Q 028808 24 RIPTSSRAYASVAVGSDIVSAAQDV-SLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNN 102 (203)
Q Consensus 24 ~~~~~~~~~~~~~~G~~~~~~APdf-~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~ 102 (203)
+-+++.....+..+|++ +|+| ++.+.+| .++|++ ++|| +||++||++|||+|..+ +|.|+++
T Consensus 11 ~~~~~~~~~~~~~vG~~----~P~f~~l~~~~g----------~v~l~~-~~gk-~vll~F~a~wC~~C~~~-~p~l~~l 73 (165)
T 3s9f_A 11 SSGLVPRGSHMSGVAKH----LGEALKLRKQAD----------TADMDS-LSGK-TVFFYFSASWCPPCRGF-TPQLVEF 73 (165)
T ss_dssp -----------CHHHHH----HHHTSCEEETTE----------EECSGG-GTTS-EEEEEEECTTCHHHHHH-HHHHHHH
T ss_pred cCCccccchhhhhhccc----CCcceeeecCCC----------cccHHH-cCCC-EEEEEEECCcChhHHHH-HHHHHHH
Confidence 34566777788889999 5999 9998763 799999 5998 67788999999999999 9999999
Q ss_pred HHHHHH-cCCcEEEEEecCCH-HHHHHHHHHhCCCCceEEEeeCC-chHHHHcCCccccccccCCCCcceEEEEEe-C-C
Q 028808 103 IDKFKA-KGIDSVICVAVNDP-YVMNGWAEKLQAKDVIEFYGDFD-GSFHKSLDLGKDLSAALLGPRSERWSAYVE-D-G 177 (203)
Q Consensus 103 ~~~f~~-~gv~~vi~IS~d~~-~~~~~~~~~~~l~~~fpllsD~~-~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-d-G 177 (203)
+++|++ +++. |++|+.|+. ...++|.+++++. .+|+..+.. .++++.||+.. .|++|||| + |
T Consensus 74 ~~~~~~~~~v~-vv~v~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~~-----------~Pt~~lid~~~G 140 (165)
T 3s9f_A 74 YEKHHDSKNFE-IILASWDEEEDDFNAYYAKMPWL-SIPFANRNIVEALTKKYSVES-----------IPTLIGLNADTG 140 (165)
T ss_dssp HHHHTTTTTEE-EEEEECCCSHHHHHHHHTTCSSE-ECCTTCHHHHHHHHHHTTCCS-----------SSEEEEEETTTC
T ss_pred HHHhccCCCeE-EEEEecCCCHHHHHHHHHhCCCc-ccccCchhHHHHHHHHcCCCC-----------CCEEEEEeCCCC
Confidence 999986 6888 999999865 6788899888754 466665544 89999999853 57899999 8 9
Q ss_pred EEEEEEee
Q 028808 178 RIKALNVE 185 (203)
Q Consensus 178 ~I~~~~~~ 185 (203)
+|++.+..
T Consensus 141 ~iv~~~~~ 148 (165)
T 3s9f_A 141 DTVTTRAR 148 (165)
T ss_dssp CEEESCHH
T ss_pred EEEecccH
Confidence 99998764
No 105
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.81 E-value=1.3e-20 Score=143.37 Aligned_cols=121 Identities=15% Similarity=0.233 Sum_probs=100.9
Q ss_pred cCCCccccCCCc-eEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH-cCCcE
Q 028808 36 AVGSDIVSAAQD-VSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA-KGIDS 113 (203)
Q Consensus 36 ~~G~~~~~~APd-f~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~-~gv~~ 113 (203)
.+|+. +|+ |++.+.+| .++|++ ++|| +||++||++|||+|..+ +|.|++++++|++ .++.
T Consensus 3 ~~~~~----~P~~f~l~~~~g----------~~~l~~-~~gk-~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~- 64 (146)
T 1o8x_A 3 GLDKY----LPGIEKLRRGDG----------EVEVKS-LAGK-LVFFYFSASWCPPARGF-TPQLIEFYDKFHESKNFE- 64 (146)
T ss_dssp CGGGT----STTCCEEEETTE----------EEEGGG-GTTC-EEEEEEECTTCHHHHHH-HHHHHHHHHHHTTTTTEE-
T ss_pred chHhh----CCCceEEEcCCC----------CCcHHH-hCCC-EEEEEEEccCCHHHHHH-HHHHHHHHHHhhhcCCeE-
Confidence 45777 699 99999862 799999 4998 57778999999999999 9999999999984 6888
Q ss_pred EEEEecCC-HHHHHHHHHHhCCCCceEEEe-eCCchHHHHcCCccccccccCCCCcceEEEEEe--CCEEEEEEeec
Q 028808 114 VICVAVND-PYVMNGWAEKLQAKDVIEFYG-DFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE--DGRIKALNVEE 186 (203)
Q Consensus 114 vi~IS~d~-~~~~~~~~~~~~l~~~fplls-D~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId--dG~I~~~~~~~ 186 (203)
|++|+.|+ ....++|.++++.. +||++. |.+.++++.||+.. .|++|||| +|+|++.+...
T Consensus 65 vv~v~~d~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~-----------~Pt~~lid~~~G~i~~~~~~~ 129 (146)
T 1o8x_A 65 VVFCTWDEEEDGFAGYFAKMPWL-AVPFAQSEAVQKLSKHFNVES-----------IPTLIGVDADSGDVVTTRARA 129 (146)
T ss_dssp EEEEECCCSHHHHHHHHTTCSSE-ECCGGGHHHHHHHHHHTTCCS-----------SSEEEEEETTTCCEEESCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHCCce-eeccchhhHHHHHHHHhCCCC-----------CCEEEEEECCCCeEEEecchh
Confidence 99999985 57788999998863 477766 67789999999852 47899999 89999987654
No 106
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.78 E-value=3.1e-20 Score=140.40 Aligned_cols=120 Identities=13% Similarity=0.194 Sum_probs=98.6
Q ss_pred cCCCccccCCCce-EEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHH-HcCCcE
Q 028808 36 AVGSDIVSAAQDV-SLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFK-AKGIDS 113 (203)
Q Consensus 36 ~~G~~~~~~APdf-~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~-~~gv~~ 113 (203)
.+|+. +|+| ++.+.+| .++|++ ++|| ++|++||++|||+|..+ +|.|++++++++ +.++.
T Consensus 3 ~~g~~----~p~~~~l~~~~g----------~~~l~~-~~gk-~vll~F~a~wC~~C~~~-~~~l~~l~~~~~~~~~~~- 64 (144)
T 1o73_A 3 GLAKY----LPGATNLLSKSG----------EVSLGS-LVGK-TVFLYFSASWCPPCRGF-TPVLAEFYEKHHVAKNFE- 64 (144)
T ss_dssp GGGGT----SCTTCCBBCTTS----------CBCSGG-GTTC-EEEEEEECTTCHHHHHH-HHHHHHHHHHHTTTTTEE-
T ss_pred chhhh----CccceEeecCCC----------cCcHHH-hCCC-EEEEEEECcCCHHHHHH-HHHHHHHHHHhccCCCEE-
Confidence 56777 6997 9988763 689999 4998 56778999999999999 999999999998 46888
Q ss_pred EEEEecCC-HHHHHHHHHHhCCCCceEEEe-eCCchHHHHcCCccccccccCCCCcceEEEEEe--CCEEEEEEee
Q 028808 114 VICVAVND-PYVMNGWAEKLQAKDVIEFYG-DFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE--DGRIKALNVE 185 (203)
Q Consensus 114 vi~IS~d~-~~~~~~~~~~~~l~~~fplls-D~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId--dG~I~~~~~~ 185 (203)
|++|+.|+ ....++|.++++.. ++|+.. |.+.++++.||+.. .|++|||| +|+|++.+..
T Consensus 65 vv~i~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~-----------~Pt~~lid~~~G~i~~~~~~ 128 (144)
T 1o73_A 65 VVLISWDENESDFHDYYGKMPWL-ALPFDQRSTVSELGKTFGVES-----------IPTLITINADTGAIIGTQAR 128 (144)
T ss_dssp EEEEECCSSHHHHHHHHTTCSSE-ECCTTCHHHHHHHHHHHTCCS-----------SSEEEEEETTTCCEEESCHH
T ss_pred EEEEeCCCCHHHHHHHHHhCCce-EeeccchhHHHHHHHHcCCCC-----------CCEEEEEECCCCeEEecchh
Confidence 99999986 46788898888753 466665 66788999999853 47899999 8999998754
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.32 E-value=4.2e-13 Score=99.27 Aligned_cols=78 Identities=6% Similarity=0.035 Sum_probs=62.1
Q ss_pred cCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHc
Q 028808 73 FKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSL 152 (203)
Q Consensus 73 ~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~y 152 (203)
.+|| ++|+.||++|||+|... .|.|.+++++++ .++. ++.|+.+ .|.+.++++.|
T Consensus 24 ~~~k-~~lv~f~a~wC~~C~~~-~~~l~~~~~~~~-~~v~-~~~v~~~---------------------~d~~~~~~~~~ 78 (126)
T 2l57_A 24 KEGI-PTIIMFKTDTCPYCVEM-QKELSYVSKERE-GKFN-IYYARLE---------------------EEKNIDLAYKY 78 (126)
T ss_dssp CSSS-CEEEEEECSSCHHHHHH-HHHHHHHHHHSS-SSCE-EEEEETT---------------------SSHHHHHHHHT
T ss_pred hCCC-cEEEEEECCCCccHHHH-HHHHHHHHHHhc-CCeE-EEEEeCC---------------------CCchHHHHHHc
Confidence 3666 56778999999999999 899999998886 5687 9999855 23445678888
Q ss_pred CCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 153 DLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 153 Gv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
|+.. .|+++++| +|++++...+.
T Consensus 79 ~v~~-----------~Pt~~~~~~~G~~~~~~~G~ 102 (126)
T 2l57_A 79 DANI-----------VPTTVFLDKEGNKFYVHQGL 102 (126)
T ss_dssp TCCS-----------SSEEEEECTTCCEEEEEESC
T ss_pred CCcc-----------eeEEEEECCCCCEEEEecCC
Confidence 8752 47789999 99999987753
No 108
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.28 E-value=1.5e-13 Score=103.37 Aligned_cols=101 Identities=13% Similarity=0.129 Sum_probs=69.9
Q ss_pred cCCCccccCCCceE-EeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhH---HHhHHHHHHcCC
Q 028808 36 AVGSDIVSAAQDVS-LQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSY---KNNIDKFKAKGI 111 (203)
Q Consensus 36 ~~G~~~~~~APdf~-l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l---~~~~~~f~~~gv 111 (203)
..|.. +|+|+ +.+.++ ....|++. +|| ++|+.||++|||+|... .+.+ .++.++++ ++
T Consensus 5 ~~~~~----~~~f~~~~~~~~---------~~~~l~~~-~~k-~vlv~F~a~wC~~C~~~-~~~~~~~~~l~~~~~--~~ 66 (134)
T 2fwh_A 5 AQTQT----HLNFTQIKTVDE---------LNQALVEA-KGK-PVMLDLYADWCVACKEF-EKYTFSDPQVQKALA--DT 66 (134)
T ss_dssp ---------CCCCEECCSHHH---------HHHHHHHH-TTS-CEEEEEECTTCHHHHHH-HHHTTTSHHHHHHTT--TS
T ss_pred ccccc----CCCcEEecCHHH---------HHHHHHHh-cCC-cEEEEEECCCCHHHHHH-HHHhcCCHHHHHHhc--Cc
Confidence 44555 69998 544432 45677774 787 56778999999999987 7877 77777765 58
Q ss_pred cEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEE--EEEee
Q 028808 112 DSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIK--ALNVE 185 (203)
Q Consensus 112 ~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~--~~~~~ 185 (203)
. ++.|+.++. .|.+.+++++||+.. .|+++++| +|+++ +...|
T Consensus 67 ~-~~~vd~~~~-------------------~~~~~~l~~~~~v~~-----------~Pt~~~~d~~G~~v~~~~~~G 112 (134)
T 2fwh_A 67 V-LLQANVTAN-------------------DAQDVALLKHLNVLG-----------LPTILFFDGQGQEHPQARVTG 112 (134)
T ss_dssp E-EEEEECTTC-------------------CHHHHHHHHHTTCCS-----------SSEEEEECTTSCBCGGGCBCS
T ss_pred E-EEEEeCCCC-------------------cchHHHHHHHcCCCC-----------CCEEEEECCCCCEeeeeeeee
Confidence 7 999988652 134566788888742 47889998 99997 55544
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.27 E-value=4.9e-13 Score=103.21 Aligned_cols=94 Identities=6% Similarity=-0.020 Sum_probs=69.9
Q ss_pred eeeecccccCCCeEEEEEee-CCCCCCCCccchhhH---HHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEE
Q 028808 65 ATTPIKDIFKGKKVVIFGLP-GAYTGVCSNQHVPSY---KNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEF 140 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~-~~~cp~C~~ehl~~l---~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpl 140 (203)
+.+++++ .+||+ ||+.|| ++|||+|..+ +|.+ .++.+.+ ..++. ++.|+.++.. +++ ++
T Consensus 38 ~~~~~a~-~~gk~-vlv~F~ga~wC~~C~~~-~p~l~~~~~~~~~~-~~~~~-~v~vd~~~~~---------~~~--~~- 100 (154)
T 2ju5_A 38 EALEHSK-QDHKP-IGLFFTGSDWCMWCIKM-QDQILQSSEFKHFA-GVHLH-MVEVDFPQKN---------HQP--EE- 100 (154)
T ss_dssp HHHHHHH-HHCCC-EEEEEECTTTCHHHHHH-HHHTTTSHHHHHHH-HHHCE-EEEEECCSSC---------CCC--HH-
T ss_pred HHHHHHH-hCCCe-EEEEEeCCCCCHhHHHH-HHHHhcCHHHHHHh-cCcEE-EEEecCcccc---------CCC--hh-
Confidence 6788888 48884 666788 9999999999 8998 5554444 34576 8888776532 343 44
Q ss_pred EeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecC
Q 028808 141 YGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEA 187 (203)
Q Consensus 141 lsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~ 187 (203)
+.|.+.++++.||+.. .|+++|+| +|+|++.. +..
T Consensus 101 ~~~~~~~l~~~~~v~~-----------~Pt~~~~d~~G~~~~~~-G~~ 136 (154)
T 2ju5_A 101 QRQKNQELKAQYKVTG-----------FPELVFIDAEGKQLARM-GFE 136 (154)
T ss_dssp HHHHHHHHHHHTTCCS-----------SSEEEEECTTCCEEEEE-CCC
T ss_pred hHhhHHHHHHHcCCCC-----------CCEEEEEcCCCCEEEEe-cCC
Confidence 3577788999999853 47899999 99999987 643
No 110
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.20 E-value=1.9e-11 Score=91.02 Aligned_cols=97 Identities=12% Similarity=0.114 Sum_probs=70.0
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHH--HhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYK--NNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKS 151 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~--~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~ 151 (203)
+|| +||+.||++||++|... .|.|. ++.+++++ ++. ++.|+.++ .|.+.++++.
T Consensus 28 ~~k-~vlv~f~a~wC~~C~~~-~~~l~~~~~~~~~~~-~~~-~~~vd~~~--------------------~~~~~~l~~~ 83 (133)
T 3fk8_A 28 THK-PTLLVFGANWCTDCRAL-DKSLRNQKNTALIAK-HFE-VVKIDVGN--------------------FDRNLELSQA 83 (133)
T ss_dssp HTC-CEEEEEECTTCHHHHHH-HHHHTSHHHHHHHHH-HCE-EEEEECTT--------------------TTSSHHHHHH
T ss_pred cCC-cEEEEEcCCCCHHHHHH-HHHhCCHHHHHHhcC-CEE-EEEEeCCc--------------------ccchHHHHHH
Confidence 576 57778999999999999 89999 88888865 477 99998864 2556778888
Q ss_pred cCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCC---cccCCHHHHHhc
Q 028808 152 LDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSK---MKVSGGDVILGQ 202 (203)
Q Consensus 152 yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~---~~~~~a~~vL~~ 202 (203)
||+... ...|+++++| +|++++...+..... .+..+.+++|++
T Consensus 84 ~~v~~~--------~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 84 YGDPIQ--------DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp TTCGGG--------GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred hCCccC--------CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 888321 1358889998 999999987743221 233445555543
No 111
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.19 E-value=2.9e-11 Score=89.81 Aligned_cols=82 Identities=10% Similarity=0.117 Sum_probs=62.7
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeC
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDF 144 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~ 144 (203)
+.++... .+|| ++|+.||++||++|... .|.++++++++++ ++. ++.|+.| .
T Consensus 33 ~~~~~~~-~~~k-~vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~-~v~-~~~vd~d-----------------------~ 84 (128)
T 3ul3_B 33 NIINGVN-MKNT-VIVLYFFAKWCQACTMQ-STEMDKLQKYYGK-RIY-LLKVDLD-----------------------K 84 (128)
T ss_dssp SSSSBTT-SCCS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHGG-GEE-EEEEEGG-----------------------G
T ss_pred cHHHHHH-ccCC-EEEEEEECCCCHHHHHH-hHHHHHHHHHhcC-CeE-EEEEECC-----------------------C
Confidence 4456665 4777 67788999999999999 9999999999974 466 7777643 3
Q ss_pred CchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 145 DGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 145 ~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
+.+++++||+.. .|+.+++++|+++..+.+
T Consensus 85 ~~~l~~~~~v~~-----------~Pt~~~~~~G~~~~~~~G 114 (128)
T 3ul3_B 85 NESLARKFSVKS-----------LPTIILLKNKTMLARKDH 114 (128)
T ss_dssp CHHHHHHTTCCS-----------SSEEEEEETTEEEEEESS
T ss_pred CHHHHHHcCCCC-----------cCEEEEEECCEEEEEecC
Confidence 346788888753 477777789999988765
No 112
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.12 E-value=1.1e-10 Score=87.45 Aligned_cols=93 Identities=13% Similarity=0.193 Sum_probs=67.0
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeC
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDF 144 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~ 144 (203)
...+|++ ++|+ ++|+.||++|||+|... .|.|.++++++.+ .+. ++.|..|.
T Consensus 42 ~~~~l~~-~~~k-~vlv~f~a~wC~~C~~~-~~~~~~~~~~~~~-~~~-~~~v~~~~----------------------- 93 (141)
T 3hxs_A 42 HSKEWKY-LGDK-PAIVDFYADWCGPCKMV-APILEELSKEYAG-KIY-IYKVNVDK----------------------- 93 (141)
T ss_dssp CCCCCCC-CCSS-CEEEEEECTTCTTHHHH-HHHHHHHHHHTTT-TCE-EEEEETTT-----------------------
T ss_pred chhHHHH-hCCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHhcC-ceE-EEEEECCC-----------------------
Confidence 5677777 4777 56778999999999999 8999999998875 366 77776543
Q ss_pred CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCcccCCHHHHHh
Q 028808 145 DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKMKVSGGDVILG 201 (203)
Q Consensus 145 ~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~~~~~a~~vL~ 201 (203)
+.++++.||+.. .|+.++++ +|+++ ...+. .+..+..+.|+
T Consensus 94 ~~~~~~~~~v~~-----------~Pt~~~~~~~g~~~-~~~G~----~~~~~l~~~l~ 135 (141)
T 3hxs_A 94 EPELARDFGIQS-----------IPTIWFVPMKGEPQ-VNMGA----LSKEQLKGYID 135 (141)
T ss_dssp CHHHHHHTTCCS-----------SSEEEEECSSSCCE-EEESC----CCHHHHHHHHH
T ss_pred CHHHHHHcCCCC-----------cCEEEEEeCCCCEE-EEeCC----CCHHHHHHHHH
Confidence 446788888753 47788888 99987 44432 23344444444
No 113
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.12 E-value=3.6e-10 Score=81.78 Aligned_cols=75 Identities=11% Similarity=0.125 Sum_probs=59.7
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+|+.||++|||+|... .|.|.++++++++ ++. ++.|+.|. +.+++++||
T Consensus 16 ~~~-~~lv~f~a~wC~~C~~~-~~~l~~~~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 68 (112)
T 2voc_A 16 SEG-VVLADFWAPWCGPSKMI-APVLEELDQEMGD-KLK-IVKIDVDE-----------------------NQETAGKYG 68 (112)
T ss_dssp SSS-EEEEEEECTTBGGGGGH-HHHHHHHHHHHTT-TCE-EEEEETTT-----------------------CCSHHHHTT
T ss_pred CCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHhCC-CcE-EEEEECCC-----------------------CHHHHHHcC
Confidence 556 67778999999999999 8999999999875 577 88887653 346888888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++.+.+.
T Consensus 69 v~~-----------~Pt~~~~~~G~~~~~~~G~ 90 (112)
T 2voc_A 69 VMS-----------IPTLLVLKDGEVVETSVGF 90 (112)
T ss_dssp CCS-----------BSEEEEEETTEEEEEEESC
T ss_pred CCc-----------ccEEEEEeCCEEEEEEeCC
Confidence 853 4767777899999888764
No 114
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.07 E-value=6.1e-12 Score=97.98 Aligned_cols=107 Identities=8% Similarity=0.075 Sum_probs=61.7
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhH--HHhHHHHHHcCCcEEEEEecCCHHHHHHH--HHHhCCCCceEE
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSY--KNNIDKFKAKGIDSVICVAVNDPYVMNGW--AEKLQAKDVIEF 140 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l--~~~~~~f~~~gv~~vi~IS~d~~~~~~~~--~~~~~l~~~fpl 140 (203)
+.+.++. .+|| +||++||++||++|...+.+.| .++.+.+++ ++. ++.|+.|+....... ....+....+..
T Consensus 38 ~~~~~a~-~~gk-~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~-~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 113 (172)
T 3f9u_A 38 LGMEYAR-QHNK-PVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYV-LITLYVDNKTPLTEPVKIMENGTERTLRT 113 (172)
T ss_dssp HHHHHHH-HTTC-CEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCE-EEEEETTCCCEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHH-HcCC-eEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEE-EEEEecCcccccchhhhhhhcchhhhhhh
Confidence 3455555 3787 6788999999999987312222 444444444 587 999998763211000 000000001222
Q ss_pred EeeCCchH-HHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 141 YGDFDGSF-HKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 141 lsD~~~~v-~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+.|....+ ++.||+. ..|+++|+| +|+|++.+.+.
T Consensus 114 ~~~~~~~~~~~~~~v~-----------~~Pt~~lid~~G~~~~~~~G~ 150 (172)
T 3f9u_A 114 VGDKWSYLQRVKFGAN-----------AQPFYVLIDNEGNPLNKSYAY 150 (172)
T ss_dssp HHHHHHHHHHHHHSCC-----------CSSEEEEECTTSCBSSCCBCS
T ss_pred hhhhhhHHHHHHcCCC-----------CcceEEEECCCCCEEeeccCC
Confidence 22322333 5778775 358899999 99999987753
No 115
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.00 E-value=1e-10 Score=86.46 Aligned_cols=85 Identities=9% Similarity=0.101 Sum_probs=59.7
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhH---HHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEE
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSY---KNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFY 141 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l---~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpll 141 (203)
+.+++++ .+|| ++|+.||++|||+|... .|.+ .++.+.++ .++. ++.|..+.
T Consensus 18 ~~~~~~~-~~~k-~vlv~f~a~wC~~C~~~-~~~~~~~~~~~~~~~-~~~~-~~~vd~~~-------------------- 72 (130)
T 2kuc_A 18 EALKRAE-VEDK-LLFVDCFTTWCGPCKRL-SKVVFKDSLVADYFN-RHFV-NLKMDMEK-------------------- 72 (130)
T ss_dssp HHHHHHH-HHSS-CEEEEECCTTCTHHHHH-HHHGGGCHHHHHHHH-HHSE-EEEECSSS--------------------
T ss_pred HHHHHHH-hcCC-eEEEEEECCCCccHHHH-HHHhcCcHHHHHHHh-cCeE-EEEEecCC--------------------
Confidence 4566665 3677 56778999999999998 8888 44444443 3455 66666553
Q ss_pred eeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 142 GDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 142 sD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
|.+..++++||+.. .|+++++| +|++++...+.
T Consensus 73 -~~~~~~~~~~~v~~-----------~Pt~~~~d~~G~~~~~~~G~ 106 (130)
T 2kuc_A 73 -GEGVELRKKYGVHA-----------YPTLLFINSSGEVVYRLVGA 106 (130)
T ss_dssp -TTHHHHHHHTTCCS-----------SCEEEEECTTSCEEEEEESC
T ss_pred -cchHHHHHHcCCCC-----------CCEEEEECCCCcEEEEecCC
Confidence 34567788888752 47789998 99999987653
No 116
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.00 E-value=2e-10 Score=83.06 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=57.1
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|| ++|+.||++|||+|... .|.+++++++++ ++. ++.|..| .+.+++++||
T Consensus 23 ~~k-~vlv~f~a~wC~~C~~~-~p~l~~l~~~~~--~~~-~~~vd~~-----------------------~~~~l~~~~~ 74 (109)
T 3f3q_A 23 QDK-LVVVDFYATWCGPCKMI-APMIEKFSEQYP--QAD-FYKLDVD-----------------------ELGDVAQKNE 74 (109)
T ss_dssp SSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred cCC-EEEEEEECCcCHhHHHH-HHHHHHHHHHCC--CCE-EEEEECC-----------------------CCHHHHHHcC
Confidence 355 67888999999999999 899999988875 466 7777664 3456788888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++++|+++....+.
T Consensus 75 v~~-----------~Pt~~~~~~G~~~~~~~G~ 96 (109)
T 3f3q_A 75 VSA-----------MPTLLLFKNGKEVAKVVGA 96 (109)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESS
T ss_pred CCc-----------cCEEEEEECCEEEEEEeCC
Confidence 753 4666666799999988764
No 117
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.00 E-value=8.5e-10 Score=78.03 Aligned_cols=86 Identities=14% Similarity=0.146 Sum_probs=62.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+++.||++|||+|... .|.+++++++++++ +. ++.|+.|. +.+++++||
T Consensus 18 ~~~-~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~~-~~-~~~v~~~~-----------------------~~~~~~~~~ 70 (106)
T 3die_A 18 ESG-VQLVDFWATACGPCKMI-APVLEELAADYEGK-AD-ILKLDVDE-----------------------NPSTAAKYE 70 (106)
T ss_dssp CSS-EEEEEEECSBCHHHHHH-HHHHHHHHHHTTTT-CE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCC-cEEEEEECCCCHHHHHH-hHHHHHHHHHhcCC-cE-EEEEECCc-----------------------CHHHHHhCC
Confidence 555 67778999999999999 89999999998764 77 88887643 345777787
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeecCCCCcccCCHHHHHh
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPSKMKVSGGDVILG 201 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~~~~~~~~a~~vL~ 201 (203)
+.. .|+.+++++|+++....+.. +.++..+.|+
T Consensus 71 v~~-----------~Pt~~~~~~G~~~~~~~g~~----~~~~l~~~l~ 103 (106)
T 3die_A 71 VMS-----------IPTLIVFKDGQPVDKVVGFQ----PKENLAEVLD 103 (106)
T ss_dssp CCS-----------BSEEEEEETTEEEEEEESCC----CHHHHHHHHH
T ss_pred Ccc-----------cCEEEEEeCCeEEEEEeCCC----CHHHHHHHHH
Confidence 753 46666667999998876532 2344444444
No 118
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.99 E-value=7.4e-10 Score=78.46 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=57.6
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.|+ .+++.||++|||+|... .|.++++.+++++. +. ++.|+.|. +.+++++||
T Consensus 16 ~~~-~~~v~f~~~~C~~C~~~-~~~l~~~~~~~~~~-v~-~~~v~~~~-----------------------~~~~~~~~~ 68 (105)
T 1nsw_A 16 GDG-PVLVDFWAAWCGPCRMM-APVLEEFAEAHADK-VT-VAKLNVDE-----------------------NPETTSQFG 68 (105)
T ss_dssp SSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHSTTT-CE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-cEEEEEECCCCHHHHHH-HHHHHHHHHHhcCC-cE-EEEEECcC-----------------------CHHHHHHcC
Confidence 355 67778999999999999 89999998888653 77 88887653 345777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++.+.+.
T Consensus 69 v~~-----------~Pt~~~~~~G~~~~~~~G~ 90 (105)
T 1nsw_A 69 IMS-----------IPTLILFKGGRPVKQLIGY 90 (105)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred Ccc-----------ccEEEEEeCCeEEEEEecC
Confidence 753 4667777899999887653
No 119
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.97 E-value=1.7e-09 Score=77.52 Aligned_cols=75 Identities=15% Similarity=0.250 Sum_probs=56.3
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.|+ ++++.||++|||+|... .|.|.++++++++. +. ++.|+.|. +.+++++||
T Consensus 22 ~~~-~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~~~-~~-~~~v~~~~-----------------------~~~~~~~~~ 74 (112)
T 1t00_A 22 NDK-PVLVDFWAAWCGPCRQI-APSLEAIAAEYGDK-IE-IVKLNIDE-----------------------NPGTAAKYG 74 (112)
T ss_dssp CSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTTT-CE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-eEEEEEECCCCHhHHhc-CHHHHHHHHHhcCC-eE-EEEEEcCC-----------------------CHHHHHhCC
Confidence 355 57778999999999999 89999999888653 77 88887654 346778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++...+.
T Consensus 75 v~~-----------~Pt~~~~~~G~~~~~~~G~ 96 (112)
T 1t00_A 75 VMS-----------IPTLNVYQGGEVAKTIVGA 96 (112)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------ccEEEEEeCCEEEEEEeCC
Confidence 753 3544444599999887754
No 120
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.97 E-value=5.1e-10 Score=79.94 Aligned_cols=74 Identities=9% Similarity=0.116 Sum_probs=49.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+++.||++|||+|... .|.++++++++. ++. ++.|+.|. +.+++++||
T Consensus 17 ~~~-~vlv~f~a~wC~~C~~~-~p~~~~~~~~~~--~~~-~~~vd~~~-----------------------~~~l~~~~~ 68 (105)
T 4euy_A 17 EQQ-LVLLFIKTENCGVCDVM-LRKVNYVLENYN--YVE-KIEILLQD-----------------------MQEIAGRYA 68 (105)
T ss_dssp CSS-EEEEEEEESSCHHHHHH-HHHHHHHHHTCT--TEE-EEEEEECC-----------------------C--------
T ss_pred cCC-CEEEEEeCCCCcchHHH-HHHHHHHHHHcC--Cce-EEEEECCC-----------------------CHHHHHhcC
Confidence 344 68889999999999999 899999888873 466 77776643 235667777
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++++|+++....+.
T Consensus 69 v~~-----------~Pt~~~~~~G~~~~~~~g~ 90 (105)
T 4euy_A 69 VFT-----------GPTVLLFYNGKEILRESRF 90 (105)
T ss_dssp -CC-----------CCEEEEEETTEEEEEEESS
T ss_pred CCC-----------CCEEEEEeCCeEEEEEeCC
Confidence 742 4666777899999887653
No 121
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.4e-09 Score=78.16 Aligned_cols=75 Identities=5% Similarity=0.208 Sum_probs=56.3
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
|+ ++++.||++|||+|... .|.|.+++++++..++. ++.|+.+. +.++++.||+
T Consensus 21 ~~-~~~v~f~a~wC~~C~~~-~~~~~~~~~~~~~~~~~-~~~vd~~~-----------------------~~~~~~~~~v 74 (112)
T 3d6i_A 21 DK-LIVLYFHTSWAEPCKAL-KQVFEAISNEPSNSNVS-FLSIDADE-----------------------NSEISELFEI 74 (112)
T ss_dssp TC-CEEEEEECCC--CHHHH-HHHHHHHHHCGGGTTSE-EEEEETTT-----------------------CHHHHHHTTC
T ss_pred CC-EEEEEEECCCCHHHHHH-HHHHHHHHHhcCCCCEE-EEEEeccc-----------------------CHHHHHHcCC
Confidence 55 67788999999999999 89999998887656787 88888764 2367888887
Q ss_pred ccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
.. .|+.+++.+|+++....+.
T Consensus 75 ~~-----------~Pt~~~~~~G~~~~~~~G~ 95 (112)
T 3d6i_A 75 SA-----------VPYFIIIHKGTILKELSGA 95 (112)
T ss_dssp CS-----------SSEEEEEETTEEEEEECSC
T ss_pred Cc-----------ccEEEEEECCEEEEEecCC
Confidence 53 4655555699999987764
No 122
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.93 E-value=9.1e-10 Score=78.28 Aligned_cols=75 Identities=9% Similarity=0.166 Sum_probs=56.1
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.|+ .+++.||++|||+|... .|.|.++++++++. +. ++.|+.|. +.+++++||
T Consensus 18 ~~~-~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~-~~-~~~v~~~~-----------------------~~~~~~~~~ 70 (107)
T 1dby_A 18 SSV-PVLVDFWAPWCGPCRII-APVVDEIAGEYKDK-LK-CVKLNTDE-----------------------SPNVASEYG 70 (107)
T ss_dssp CSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTTT-CE-EEEEETTT-----------------------CHHHHHHHT
T ss_pred CCC-cEEEEEECCCCHhHHHH-HHHHHHHHHHhCCc-eE-EEEEECCC-----------------------CHHHHHHCC
Confidence 355 57778999999999999 89999998888653 77 88887653 346778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++...+.
T Consensus 71 v~~-----------~Pt~~~~~~G~~~~~~~G~ 92 (107)
T 1dby_A 71 IRS-----------IPTIMVFKGGKKCETIIGA 92 (107)
T ss_dssp CCS-----------SCEEEEESSSSEEEEEESC
T ss_pred CCc-----------CCEEEEEeCCEEEEEEeCC
Confidence 753 3554444599999887764
No 123
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.93 E-value=1e-09 Score=80.68 Aligned_cols=76 Identities=14% Similarity=0.237 Sum_probs=58.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+|+.||++|||.|... .|.|++++++++++++. ++.|+.|. +.++++.||
T Consensus 32 ~~k-~vvv~f~a~~C~~C~~~-~~~l~~l~~~~~~~~v~-~~~vd~d~-----------------------~~~~~~~~~ 85 (121)
T 2j23_A 32 GDK-VVVIDFWATWCGPCKMI-GPVFEKISDTPAGDKVG-FYKVDVDE-----------------------QSQIAQEVG 85 (121)
T ss_dssp SSS-CEEEEEECTTCSTHHHH-HHHHHHHHTSTHHHHSE-EEEEETTT-----------------------CHHHHHHHT
T ss_pred CCC-EEEEEEECCCCHhHHHH-HHHHHHHHHHCcCCcEE-EEEEECcC-----------------------CHHHHHHcC
Confidence 355 57778999999999999 89999999888877787 88887754 346777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++++|+++....+.
T Consensus 86 v~~-----------~Pt~~~~~~G~~~~~~~G~ 107 (121)
T 2j23_A 86 IRA-----------MPTFVFFKNGQKIDTVVGA 107 (121)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESS
T ss_pred CCc-----------ccEEEEEECCeEEeeEcCC
Confidence 753 3655555699999887653
No 124
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.92 E-value=4.9e-10 Score=81.91 Aligned_cols=74 Identities=12% Similarity=0.180 Sum_probs=56.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|| ++|+.||++||++|... .|.|+++++++++ +. ++.|..|. +.++++.||
T Consensus 30 ~~k-~vlv~F~a~wC~~C~~~-~p~l~~l~~~~~~--v~-~~~vd~d~-----------------------~~~l~~~~~ 81 (116)
T 3qfa_C 30 GDK-LVVVDFSATWCGPSKMI-KPFFHSLSEKYSN--VI-FLEVDVDD-----------------------CQDVASECE 81 (116)
T ss_dssp TTS-CEEEEEECTTCHHHHHH-HHHHHHHHTTCTT--SE-EEEEETTT-----------------------THHHHHHTT
T ss_pred CCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHCCC--CE-EEEEECCC-----------------------CHHHHHHcC
Confidence 566 67788999999999999 8999998888754 77 88887753 346778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....+.
T Consensus 82 v~~-----------~Pt~~~~~~G~~~~~~~G~ 103 (116)
T 3qfa_C 82 VKS-----------MPTFQFFKKGQKVGEFSGA 103 (116)
T ss_dssp CCS-----------SSEEEEESSSSEEEEEESC
T ss_pred Ccc-----------ccEEEEEeCCeEEEEEcCC
Confidence 753 3655555699998887653
No 125
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.92 E-value=1.3e-09 Score=78.29 Aligned_cols=74 Identities=11% Similarity=0.166 Sum_probs=57.7
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+|+.||++|||+|... .|.|.+++++++ ++. ++.|..++ .+.+++++||
T Consensus 23 ~~~-~vlv~f~a~wC~~C~~~-~~~l~~~~~~~~--~v~-~~~vd~~~----------------------~~~~~~~~~~ 75 (111)
T 2pu9_C 23 GDK-PVVLDMFTQWCGPSKAM-APKYEKLAEEYL--DVI-FLKLDCNQ----------------------ENKTLAKELG 75 (111)
T ss_dssp TTS-CEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEECSS----------------------TTHHHHHHHC
T ss_pred CCC-EEEEEEECCcCHhHHHH-CHHHHHHHHHCC--CeE-EEEEecCc----------------------chHHHHHHcC
Confidence 466 56778999999999999 899999988875 477 88888763 2457888888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+.. .|+ |+++ +|+++....+.
T Consensus 76 v~~-----------~Pt-~~~~~~G~~~~~~~G~ 97 (111)
T 2pu9_C 76 IRV-----------VPT-FKILKENSVVGEVTGA 97 (111)
T ss_dssp CSB-----------SSE-EEEESSSSEEEEEESS
T ss_pred CCe-----------eeE-EEEEeCCcEEEEEcCC
Confidence 753 364 7777 99999887653
No 126
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.92 E-value=3e-09 Score=76.22 Aligned_cols=75 Identities=11% Similarity=0.147 Sum_probs=57.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+|+.|+++|||.|... .|.|+++.++++++ +. ++.|+.+. +.+++++||
T Consensus 24 ~~~-~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~-v~-~~~v~~~~-----------------------~~~~~~~~~ 76 (115)
T 1thx_A 24 AEQ-PVLVYFWASWCGPCQLM-SPLINLAANTYSDR-LK-VVKLEIDP-----------------------NPTTVKKYK 76 (115)
T ss_dssp CSS-CEEEEEECTTCTTHHHH-HHHHHHHHHHTTTT-CE-EEEEESTT-----------------------CHHHHHHTT
T ss_pred CCc-eEEEEEECCCCHHHHHh-HHHHHHHHHHhCCc-EE-EEEEEcCC-----------------------CHHHHHHcC
Confidence 455 57778999999999999 89999998888754 77 88888654 235778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++...+.
T Consensus 77 v~~-----------~Pt~~~~~~G~~~~~~~g~ 98 (115)
T 1thx_A 77 VEG-----------VPALRLVKGEQILDSTEGV 98 (115)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------eeEEEEEcCCEEEEEecCC
Confidence 753 4666666799999887653
No 127
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.91 E-value=1e-09 Score=84.70 Aligned_cols=75 Identities=8% Similarity=0.143 Sum_probs=58.4
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+|+.||++||++|... .|.|++++++++.+ +. ++.|+.|. +.+++++||
T Consensus 63 ~~~-~vlv~F~a~wC~~C~~~-~p~l~~la~~~~~~-v~-~~~vd~~~-----------------------~~~l~~~~~ 115 (155)
T 2ppt_A 63 DDL-PLLVDFWAPWCGPCRQM-APQFQAAAATLAGQ-VR-LAKIDTQA-----------------------HPAVAGRHR 115 (155)
T ss_dssp CSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHHTTT-CE-EEEEETTT-----------------------STHHHHHTT
T ss_pred CCC-cEEEEEECCCCHHHHHH-HHHHHHHHHHccCC-EE-EEEEeCCc-----------------------cHHHHHHcC
Confidence 355 67778999999999999 89999999999754 77 88887753 346788888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....+.
T Consensus 116 i~~-----------~Pt~~~~~~G~~~~~~~G~ 137 (155)
T 2ppt_A 116 IQG-----------IPAFILFHKGRELARAAGA 137 (155)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------CCEEEEEeCCeEEEEecCC
Confidence 853 4666666799999887653
No 128
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=4.2e-09 Score=77.63 Aligned_cols=74 Identities=11% Similarity=0.136 Sum_probs=57.2
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH---cCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHH
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA---KGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKS 151 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~---~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~ 151 (203)
++ ++|+.||++||++|... .|.|.++++++++ .++. ++.|..+. +.++++.
T Consensus 25 ~~-~~lv~f~a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~~-~~~vd~~~-----------------------~~~l~~~ 78 (133)
T 1x5d_A 25 ED-VWMVEFYAPWCGHCKNL-EPEWAAAASEVKEQTKGKVK-LAAVDATV-----------------------NQVLASR 78 (133)
T ss_dssp SS-EEEEEEECTTCHHHHTH-HHHHHHHHHHHHHHTTTSEE-EEEEETTT-----------------------CCHHHHH
T ss_pred CC-eEEEEEECCCCHHHHhh-cHHHHHHHHHHHhhcCCcEE-EEEEECCC-----------------------CHHHHHh
Confidence 44 67888999999999999 8999999999973 3465 77776542 3578888
Q ss_pred cCCccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 152 LDLGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 152 yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
|++.. .|+.+++++|+++..+.+
T Consensus 79 ~~v~~-----------~Pt~~~~~~g~~~~~~~G 101 (133)
T 1x5d_A 79 YGIRG-----------FPTIKIFQKGESPVDYDG 101 (133)
T ss_dssp HTCCS-----------SSEEEEEETTEEEEEECS
T ss_pred CCCCe-----------eCeEEEEeCCCceEEecC
Confidence 88853 477888888988777654
No 129
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.91 E-value=1.8e-09 Score=80.02 Aligned_cols=72 Identities=14% Similarity=0.207 Sum_probs=55.4
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ ++|+.||++|||+|... .|.|+++++++. ++. ++.|+.|. +.+++++||
T Consensus 37 ~~k-~vvv~f~a~wC~~C~~~-~~~l~~l~~~~~--~v~-~~~vd~d~-----------------------~~~l~~~~~ 88 (124)
T 1xfl_A 37 SKT-LVVVDFTASWCGPCRFI-APFFADLAKKLP--NVL-FLKVDTDE-----------------------LKSVASDWA 88 (124)
T ss_dssp TTC-EEEEEEECTTCHHHHHH-HHHHHHHHHHCS--SEE-EEEEETTT-----------------------SHHHHHHTT
T ss_pred cCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHCC--CcE-EEEEECcc-----------------------CHHHHHHcC
Confidence 566 67788999999999999 899999888875 576 77777642 456788888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+.. .|+ |++. +|+++....+
T Consensus 89 v~~-----------~Pt-~~~~~~G~~~~~~~G 109 (124)
T 1xfl_A 89 IQA-----------MPT-FMFLKEGKILDKVVG 109 (124)
T ss_dssp CCS-----------SSE-EEEEETTEEEEEEES
T ss_pred CCc-----------cCE-EEEEECCEEEEEEeC
Confidence 853 354 5555 9999998775
No 130
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.91 E-value=8.7e-10 Score=82.66 Aligned_cols=67 Identities=12% Similarity=0.261 Sum_probs=53.2
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcc
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGK 156 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~ 156 (203)
+++|+.||++|||+|... .|.|.++++++++ ++. ++.|..|. +.++++.||+..
T Consensus 39 k~~lv~f~a~wC~~C~~~-~~~l~~l~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~v~~ 92 (136)
T 2l5l_A 39 KPAIVDFYADWCGPCKMV-APILDELAKEYDG-QIV-IYKVDTEK-----------------------EQELAGAFGIRS 92 (136)
T ss_dssp SCEEEEEECTTSHHHHHH-HHHHHHHHHHTTT-TCE-EEEEETTT-----------------------CHHHHHHTTCCS
T ss_pred CEEEEEEECCcCHHHHHH-HHHHHHHHHHhcC-CEE-EEEEeCCC-----------------------CHHHHHHcCCCC
Confidence 367788999999999999 8999999988864 377 88887653 346778888743
Q ss_pred ccccccCCCCcceEEEEEe-CCEEE
Q 028808 157 DLSAALLGPRSERWSAYVE-DGRIK 180 (203)
Q Consensus 157 ~~~~~g~~~~~~r~tfIId-dG~I~ 180 (203)
.|+.+++| +|+++
T Consensus 93 -----------~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 93 -----------IPSILFIPMEGKPE 106 (136)
T ss_dssp -----------SCEEEEECSSSCCE
T ss_pred -----------CCEEEEECCCCcEE
Confidence 47788888 99987
No 131
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.91 E-value=9.6e-10 Score=83.36 Aligned_cols=94 Identities=10% Similarity=0.123 Sum_probs=65.7
Q ss_pred CCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHH
Q 028808 45 AQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYV 124 (203)
Q Consensus 45 APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~ 124 (203)
+|++.+.+.++ +.+...- .+++ .+|+.||++||++|... .|.|++++++++.. +. ++.|+.|.
T Consensus 35 ~~~~~v~~l~~---------~~~~~~~-~~~k-~vlv~F~a~wC~~C~~~-~p~l~~~~~~~~~~-~~-~~~vd~~~--- 97 (148)
T 3p2a_A 35 LFDGEVINATA---------ETLDKLL-QDDL-PMVIDFWAPWCGPCRSF-APIFAETAAERAGK-VR-FVKVNTEA--- 97 (148)
T ss_dssp TTCCCCEECCT---------TTHHHHT-TCSS-CEEEEEECSSCHHHHHH-HHHHHHHHHHTTTT-CE-EEEEETTT---
T ss_pred cccCCceecCH---------HHHHHHH-hcCC-cEEEEEECCCCHHHHHH-HHHHHHHHHHcCCc-eE-EEEEECcC---
Confidence 36766666653 2232221 2455 67788999999999999 89999999988653 76 88887653
Q ss_pred HHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 125 MNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 125 ~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.++++.||+.. .|+.+++++|+++..+.+.
T Consensus 98 --------------------~~~l~~~~~v~~-----------~Pt~~~~~~G~~~~~~~G~ 128 (148)
T 3p2a_A 98 --------------------EPALSTRFRIRS-----------IPTIMLYRNGKMIDMLNGA 128 (148)
T ss_dssp --------------------CHHHHHHTTCCS-----------SSEEEEEETTEEEEEESSC
T ss_pred --------------------CHHHHHHCCCCc-----------cCEEEEEECCeEEEEEeCC
Confidence 346777888753 4655566799999877653
No 132
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.91 E-value=4.7e-09 Score=87.76 Aligned_cols=75 Identities=8% Similarity=0.042 Sum_probs=59.2
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|| +||+.||++||++|... .|.|.++++++++ .+. ++.|+.|. +.++++.||
T Consensus 25 ~~~-~v~v~f~a~wC~~C~~~-~p~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~ 77 (287)
T 3qou_A 25 MTT-PVLFYFWSERSQHCLQL-TPILESLAAQYNG-QFI-LAKLDCDA-----------------------EQMIAAQFG 77 (287)
T ss_dssp TTS-CEEEEEECTTCTTTTTT-HHHHHHHHHHHTS-SSE-EEEEETTT-----------------------CHHHHHTTT
T ss_pred CCC-eEEEEEECCCChHHHHH-HHHHHHHHHHcCC-CeE-EEEEeCcc-----------------------CHHHHHHcC
Confidence 366 67889999999999999 8999999999975 377 88887754 236778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++..+.+.
T Consensus 78 v~~-----------~Pt~~~~~~G~~~~~~~g~ 99 (287)
T 3qou_A 78 LRA-----------IPTVYLFQNGQPVDGFQGP 99 (287)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCC-----------CCeEEEEECCEEEEEeeCC
Confidence 753 4767777899999888764
No 133
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.90 E-value=5.1e-10 Score=88.24 Aligned_cols=48 Identities=4% Similarity=0.087 Sum_probs=38.3
Q ss_pred ecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC
Q 028808 68 PIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND 121 (203)
Q Consensus 68 sL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~ 121 (203)
.+++ ++|+ ++|+.||++|||+|..+ +|.|+++++++. ++. ++.|+.|.
T Consensus 48 ~l~~-~~~k-~vvv~F~A~WC~pC~~~-~P~l~~l~~~~~--~v~-~~~v~~d~ 95 (167)
T 1z6n_A 48 RLQR-IERR-YRLLVAGEMWCPDCQIN-LAALDFAQRLQP--NIE-LAIISKGR 95 (167)
T ss_dssp HHHT-CCSC-EEEEEECCTTCHHHHHH-HHHHHHHHHHCT--TEE-EEEECHHH
T ss_pred HHHH-hCCC-EEEEEEECCCChhHHHH-HHHHHHHHHHCC--CcE-EEEEECCC
Confidence 4566 4776 67778999999999999 999999988764 466 88887653
No 134
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.90 E-value=4e-11 Score=93.61 Aligned_cols=102 Identities=8% Similarity=0.147 Sum_probs=66.1
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeC
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDF 144 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~ 144 (203)
+.+++.. .+|| +||+.||++|||+|..+ +|.|.++.+.++ .++. ++.|+.|....
T Consensus 37 ~~~~~~~-~~~k-~vlv~F~a~WC~~C~~~-~p~l~~~~~~~~-~~~~-~~~v~~d~~~~-------------------- 91 (164)
T 1sen_A 37 DGKKEAA-ASGL-PLMVIIHKSWCGACKAL-KPKFAESTEISE-LSHN-FVMVNLEDEEE-------------------- 91 (164)
T ss_dssp HHHHHHH-HHTC-CEEEEEECTTCHHHHHH-HHHHHTCHHHHH-HHTT-SEEEEEEGGGS--------------------
T ss_pred HHHHHHH-hcCC-eEEEEEECCCCHHHHHH-HHHHHHHHHHhh-cCCe-EEEEEecCCch--------------------
Confidence 4456665 3777 56778999999999999 999999766554 3577 88888764311
Q ss_pred CchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCC---cccCCHHHHHhc
Q 028808 145 DGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSK---MKVSGGDVILGQ 202 (203)
Q Consensus 145 ~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~---~~~~~a~~vL~~ 202 (203)
.+++.|++.. ...|+++++| +|+++...++..+.. +-..+++++++.
T Consensus 92 --~~~~~~~~~~---------~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~ 142 (164)
T 1sen_A 92 --PKDEDFSPDG---------GYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQG 142 (164)
T ss_dssp --CSCGGGCTTC---------SCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHH
T ss_pred --HHHHHhcccC---------CcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHH
Confidence 0223344421 2468888999 999998877753210 002456666553
No 135
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.89 E-value=1.9e-09 Score=77.20 Aligned_cols=73 Identities=14% Similarity=0.185 Sum_probs=56.1
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
|+ ++|+.||++|||+|... .|.|+++++++.+ ++. ++.|+.|. +.++++.||+
T Consensus 24 ~~-~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~v 76 (112)
T 1ep7_A 24 HK-PIVVDFTATWCGPCKMI-APLFETLSNDYAG-KVI-FLKVDVDA-----------------------VAAVAEAAGI 76 (112)
T ss_dssp TC-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTT-TSE-EEEEETTT-----------------------THHHHHHHTC
T ss_pred CC-eEEEEEECCCCHHHHHH-HHHHHHHHHHcCC-CeE-EEEEECCc-----------------------hHHHHHHcCC
Confidence 66 56778999999999999 8999999888865 577 88887753 4567778887
Q ss_pred ccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 155 GKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
.. .|+ +++. +|++++.+.+.
T Consensus 77 ~~-----------~Pt-~~~~~~G~~~~~~~G~ 97 (112)
T 1ep7_A 77 TA-----------MPT-FHVYKDGVKADDLVGA 97 (112)
T ss_dssp CB-----------SSE-EEEEETTEEEEEEESC
T ss_pred Cc-----------ccE-EEEEECCeEEEEEcCC
Confidence 53 354 5555 99999887653
No 136
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.89 E-value=1.8e-09 Score=80.53 Aligned_cols=68 Identities=15% Similarity=0.291 Sum_probs=51.6
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG--IDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKS 151 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g--v~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~ 151 (203)
+++ .+|+.||++||++|... .|.|.++++++++.+ +. ++.|..+ .+.++++.
T Consensus 33 ~~~-~vlv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~-~~~vd~~-----------------------~~~~~~~~ 86 (140)
T 2dj1_A 33 DKD-TVLLEFYAPWCGHCKQF-APEYEKIASTLKDNDPPIA-VAKIDAT-----------------------SASMLASK 86 (140)
T ss_dssp TCS-EEEEEECCTTCHHHHTT-HHHHHHHHHHHHSSSSCCE-EEEECTT-----------------------TCHHHHHH
T ss_pred cCC-eEEEEEECCCCHHHHHh-hHHHHHHHHHHhccCCceE-EEEEeCc-----------------------ccHHHHHH
Confidence 355 67889999999999999 899999999998775 44 4444432 24568888
Q ss_pred cCCccccccccCCCCcceEEEEEeCCE
Q 028808 152 LDLGKDLSAALLGPRSERWSAYVEDGR 178 (203)
Q Consensus 152 yGv~~~~~~~g~~~~~~r~tfIIddG~ 178 (203)
||+.. .|+.+++++|+
T Consensus 87 ~~v~~-----------~Pt~~~~~~G~ 102 (140)
T 2dj1_A 87 FDVSG-----------YPTIKILKKGQ 102 (140)
T ss_dssp TTCCS-----------SSEEEEEETTE
T ss_pred CCCCc-----------cCeEEEEECCc
Confidence 88853 46677778898
No 137
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.89 E-value=2.1e-09 Score=78.05 Aligned_cols=74 Identities=12% Similarity=0.168 Sum_probs=54.3
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
++| +||+.||++||++|... .|.+.++.+++. ++. ++.|.. |.+.+++++||
T Consensus 19 ~~k-~vvv~F~a~wC~~C~~~-~p~~~~~~~~~~--~~~-~~~vd~-----------------------d~~~~l~~~~~ 70 (105)
T 3zzx_A 19 GNK-LVVIDFYATWCGPCKMI-APKLEELSQSMS--DVV-FLKVDV-----------------------DECEDIAQDNQ 70 (105)
T ss_dssp TTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TEE-EEEEET-----------------------TTCHHHHHHTT
T ss_pred CCC-EEEEEEECCCCCCccCC-CcchhhhhhccC--CeE-EEEEec-----------------------ccCHHHHHHcC
Confidence 455 78889999999999998 899998887764 344 555544 33456888898
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....|.
T Consensus 71 V~~-----------~PT~~~~~~G~~v~~~~G~ 92 (105)
T 3zzx_A 71 IAC-----------MPTFLFMKNGQKLDSLSGA 92 (105)
T ss_dssp CCB-----------SSEEEEEETTEEEEEEESC
T ss_pred CCe-----------ecEEEEEECCEEEEEEeCc
Confidence 853 4644444599999988763
No 138
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.89 E-value=5e-09 Score=74.07 Aligned_cols=75 Identities=16% Similarity=0.238 Sum_probs=57.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+|+.|+++|||.|... .|.|.++.+++.+ ++. ++.|+.+. +.+++++||
T Consensus 19 ~~~-~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 71 (107)
T 2i4a_A 19 ASG-LVLVDFWAEWCGPCKMI-GPALGEIGKEFAG-KVT-VAKVNIDD-----------------------NPETPNAYQ 71 (107)
T ss_dssp CSS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHTT-SEE-EEEEETTT-----------------------CCHHHHHTT
T ss_pred CCC-EEEEEEECCCChhHHHH-hHHHHHHHHHhCC-cEE-EEEEECCC-----------------------CHHHHHhcC
Confidence 355 67778999999999999 8999999998865 466 78887653 346788888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++..+.+.
T Consensus 72 v~~-----------~Pt~~~~~~G~~~~~~~G~ 93 (107)
T 2i4a_A 72 VRS-----------IPTLMLVRDGKVIDKKVGA 93 (107)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------cCEEEEEeCCEEEEEecCC
Confidence 753 4666666899999887653
No 139
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.88 E-value=2.6e-09 Score=78.16 Aligned_cols=75 Identities=12% Similarity=0.178 Sum_probs=56.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.|+ .+|+.||++|||.|... .|.|++++++++. ++. ++.|+.|. +.+++++||
T Consensus 30 ~~k-~vlv~f~a~~C~~C~~~-~~~l~~~~~~~~~-~v~-~~~vd~d~-----------------------~~~l~~~~~ 82 (119)
T 1w4v_A 30 SET-PVVVDFHAQWCGPCKIL-GPRLEKMVAKQHG-KVV-MAKVDIDD-----------------------HTDLAIEYE 82 (119)
T ss_dssp CSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTT-SSE-EEEEETTT-----------------------THHHHHHTT
T ss_pred CCC-cEEEEEECCCCHHHHHH-HHHHHHHHHHhcC-CeE-EEEEeCCC-----------------------CHHHHHHcC
Confidence 355 56778999999999999 8999999888865 477 88887653 346788888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++...+.
T Consensus 83 v~~-----------~Pt~~~~~~G~~~~~~~G~ 104 (119)
T 1w4v_A 83 VSA-----------VPTVLAMKNGDVVDKFVGI 104 (119)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------ccEEEEEeCCcEEEEEcCC
Confidence 753 3656666799999877653
No 140
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.88 E-value=2.8e-09 Score=75.81 Aligned_cols=75 Identities=11% Similarity=0.223 Sum_probs=56.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+++.||++|||+|... .|.|+++++++++ .+. ++.|+.+. +.+++++||
T Consensus 19 ~~~-~~~v~f~~~~C~~C~~~-~~~l~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 71 (108)
T 2trx_A 19 ADG-AILVDFWAEWCGPCKMI-APILDEIADEYQG-KLT-VAKLNIDQ-----------------------NPGTAPKYG 71 (108)
T ss_dssp CSS-EEEEEEECTTCHHHHHH-HHHHHHHHHHTTT-TEE-EEEEETTT-----------------------CTTHHHHTT
T ss_pred cCC-eEEEEEECCCCHhHHHH-HHHHHHHHHHhCC-CcE-EEEEECCC-----------------------CHHHHHHcC
Confidence 355 67788999999999999 8999999888864 366 77776543 335778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++..+.+.
T Consensus 72 v~~-----------~Pt~~~~~~G~~~~~~~G~ 93 (108)
T 2trx_A 72 IRG-----------IPTLLLFKNGEVAATKVGA 93 (108)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred Ccc-----------cCEEEEEeCCEEEEEEecC
Confidence 853 4666667899999887653
No 141
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.88 E-value=8.2e-10 Score=84.82 Aligned_cols=73 Identities=11% Similarity=0.141 Sum_probs=54.7
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ +||+.||++||++|..+ .|.|.+++++++++ +. ++.|+.| .+.++++.|+
T Consensus 22 ~~k-~vlv~F~a~WC~~C~~~-~p~l~~l~~~~~~~-~~-~~~vd~d-----------------------~~~~l~~~~~ 74 (149)
T 3gix_A 22 AEK-VLVLRFGRDEDPVCLQL-DDILSKTSSDLSKM-AA-IYLVDVD-----------------------QTAVYTQYFD 74 (149)
T ss_dssp CSS-EEEEEEECTTSHHHHHH-HHHHHHHHTTTTTT-EE-EEEEETT-----------------------TCCHHHHHTT
T ss_pred CCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHccCc-eE-EEEEECC-----------------------cCHHHHHHcC
Confidence 355 77889999999999999 89999998888653 55 7777653 3456788888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+.. .|+++ +. +|++++...+
T Consensus 75 v~~-----------~Pt~~-~~~~G~~v~~~~g 95 (149)
T 3gix_A 75 ISY-----------IPSTV-FFFNGQHMKVDYG 95 (149)
T ss_dssp CCS-----------SSEEE-EEETTEEEEEECS
T ss_pred CCc-----------cCeEE-EEECCeEEEeecC
Confidence 853 46555 65 9999955544
No 142
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.87 E-value=4.1e-09 Score=76.90 Aligned_cols=73 Identities=11% Similarity=0.250 Sum_probs=55.3
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+|+.||++|||+|... .|.|+++++++.+ +. ++.|+.|. +.+++++||
T Consensus 29 ~~k-~vvv~F~a~wC~~C~~~-~p~l~~~~~~~~~--v~-~~~vd~~~-----------------------~~~l~~~~~ 80 (114)
T 2oe3_A 29 QND-KLVIDFYATWCGPCKMM-QPHLTKLIQAYPD--VR-FVKCDVDE-----------------------SPDIAKECE 80 (114)
T ss_dssp HCS-EEEEEEECTTCHHHHHT-HHHHHHHHHHCTT--SE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHCCC--CE-EEEEECCC-----------------------CHHHHHHCC
Confidence 355 67788999999999999 8999999888754 77 88887653 345778888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+.. .|+ +++. +|+++....+.
T Consensus 81 v~~-----------~Pt-~~~~~~G~~~~~~~G~ 102 (114)
T 2oe3_A 81 VTA-----------MPT-FVLGKDGQLIGKIIGA 102 (114)
T ss_dssp CCS-----------BSE-EEEEETTEEEEEEESS
T ss_pred CCc-----------ccE-EEEEeCCeEEEEEeCC
Confidence 753 354 4555 99999887653
No 143
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.86 E-value=2.4e-09 Score=79.76 Aligned_cols=75 Identities=9% Similarity=0.174 Sum_probs=57.2
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+|++||++|||+|... .|.|+++++++++ ++. ++.|+.|+ +.+++++||
T Consensus 39 ~~k-~vlv~F~a~wC~~C~~~-~p~l~~l~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 91 (128)
T 2o8v_B 39 ADG-AILVDFWAEWCGPAKMI-APILDEIADEYQG-KLT-VAKLNIDQ-----------------------NPGTAPKYG 91 (128)
T ss_dssp CSS-EEEEEEECSSCHHHHHT-HHHHHHHHHHTTT-TEE-EEEEETTT-----------------------CCTTSGGGT
T ss_pred cCC-EEEEEEECCCCHHHHHH-hHHHHHHHHHhcC-CeE-EEEEECCC-----------------------CHHHHHHcC
Confidence 355 67888999999999999 8999999988865 366 88887653 235667787
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++...+.
T Consensus 92 v~~-----------~Pt~~~~~~G~~~~~~~G~ 113 (128)
T 2o8v_B 92 IRG-----------IPTLLLFKNGEVAATKVGA 113 (128)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------cCEEEEEeCCEEEEEEcCC
Confidence 753 4767777899999887653
No 144
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.86 E-value=3.9e-09 Score=73.87 Aligned_cols=74 Identities=5% Similarity=0.110 Sum_probs=56.6
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+++.|+++|||.|... .+.+.++.+++++ +. ++.|+.|. +.++++.||
T Consensus 15 ~~~-~~~v~f~~~~C~~C~~~-~~~~~~~~~~~~~--~~-~~~v~~~~-----------------------~~~~~~~~~ 66 (104)
T 2e0q_A 15 SHE-IAVVDFWAEWCAPCLIL-APIIEELAEDYPQ--VG-FGKLNSDE-----------------------NPDIAARYG 66 (104)
T ss_dssp HSS-EEEEEEECTTCHHHHHH-HHHHHHHHHHCTT--SE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCC-cEEEEEECCCChhHHHH-hHHHHHHHHHcCC--ce-EEEEECCC-----------------------CHHHHHhCC
Confidence 355 67778999999999998 8999998888764 77 88888753 345778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....+.
T Consensus 67 v~~-----------~Pt~~~~~~g~~~~~~~g~ 88 (104)
T 2e0q_A 67 VMS-----------LPTVIFFKDGEPVDEIIGA 88 (104)
T ss_dssp CCS-----------SCEEEEEETTEEEEEEESC
T ss_pred ccc-----------cCEEEEEECCeEhhhccCC
Confidence 753 4666666799999877653
No 145
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.86 E-value=4e-09 Score=77.19 Aligned_cols=74 Identities=12% Similarity=0.218 Sum_probs=56.6
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ ++++.||++|||+|... .|.+++++++++ ++. ++.|..++ .+.+++++||
T Consensus 36 ~~~-~~vv~f~a~wC~~C~~~-~~~l~~~~~~~~--~~~-~~~vd~~~----------------------~~~~~~~~~~ 88 (124)
T 1faa_A 36 GDK-PVVLDMFTQWCGPCKAM-APKYEKLAEEYL--DVI-FLKLDCNQ----------------------ENKTLAKELG 88 (124)
T ss_dssp TTS-CEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEECSS----------------------TTHHHHHHHC
T ss_pred CCC-EEEEEEECCcCHhHHHH-hHHHHHHHHHCC--CCE-EEEEecCc----------------------chHHHHHHcC
Confidence 566 56677899999999999 899999988875 577 88887753 2456778888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+.. .|+ +++. +|+++....+.
T Consensus 89 v~~-----------~Pt-~~~~~~G~~~~~~~G~ 110 (124)
T 1faa_A 89 IRV-----------VPT-FKILKENSVVGEVTGA 110 (124)
T ss_dssp CSS-----------SSE-EEEEETTEEEEEEESS
T ss_pred CCe-----------eeE-EEEEeCCcEEEEEcCC
Confidence 753 354 6666 99999887753
No 146
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=6.1e-09 Score=77.94 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=55.9
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccc
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKD 157 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~ 157 (203)
++|+.||++||++|... .|.|+++++++++.++. ++.|..+.. . ++++.|++...
T Consensus 28 ~vlv~f~a~wC~~C~~~-~p~~~~l~~~~~~~~v~-~~~vd~~~~---~--------------------~~~~~~~v~~~ 82 (137)
T 2dj0_A 28 TWIVEFFANWSNDCQSF-APIYADLSLKYNCTGLN-FGKVDVGRY---T--------------------DVSTRYKVSTS 82 (137)
T ss_dssp CEEEEECCTTCSTTTTT-HHHHHHHHHHHCSSSCE-EEECCTTTC---H--------------------HHHHHTTCCCC
T ss_pred EEEEEEECCCCHHHHHH-HHHHHHHHHHhCCCCeE-EEEEeCccC---H--------------------HHHHHccCccc
Confidence 67788999999999999 99999999999765677 877766542 2 24444444311
Q ss_pred cccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 158 LSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 158 ~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
. +.+..|+.+++.+|+++....+.
T Consensus 83 ~-----~~~~~Pt~~~~~~G~~~~~~~G~ 106 (137)
T 2dj0_A 83 P-----LTKQLPTLILFQGGKEAMRRPQI 106 (137)
T ss_dssp S-----SSSCSSEEEEESSSSEEEEESCB
T ss_pred C-----CcCCCCEEEEEECCEEEEEecCc
Confidence 0 11245766666799999887765
No 147
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.85 E-value=3.8e-09 Score=78.92 Aligned_cols=81 Identities=15% Similarity=0.262 Sum_probs=59.9
Q ss_pred eeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCC
Q 028808 66 TTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFD 145 (203)
Q Consensus 66 ~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~ 145 (203)
.+++++ .+|+ ++|++||++|||+|... .|.|+++++++. ++. ++.|+.|. +
T Consensus 38 ~~~~~~-~~~k-~vvv~f~a~wC~~C~~~-~~~l~~l~~~~~--~v~-~~~v~~~~-----------------------~ 88 (139)
T 3d22_A 38 KLSEAS-RDGK-IVLANFSARWCGPSRQI-APYYIELSENYP--SLM-FLVIDVDE-----------------------L 88 (139)
T ss_dssp HHHHHH-HHTC-CEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEETTT-----------------------S
T ss_pred HHHHHh-hcCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHCC--CCE-EEEEeCcc-----------------------c
Confidence 344444 2577 56778999999999999 899999988874 577 88888753 3
Q ss_pred chHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 146 GSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 146 ~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
.+++++||+.. .|+.+++.+|++++.+.+.
T Consensus 89 ~~~~~~~~v~~-----------~Pt~~~~~~G~~~~~~~G~ 118 (139)
T 3d22_A 89 SDFSASWEIKA-----------TPTFFFLRDGQQVDKLVGA 118 (139)
T ss_dssp HHHHHHTTCCE-----------ESEEEEEETTEEEEEEESC
T ss_pred HHHHHHcCCCc-----------ccEEEEEcCCeEEEEEeCC
Confidence 46778888753 3544444599999988764
No 148
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.85 E-value=6.4e-09 Score=74.99 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=59.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ ++|+.||++|||.|... .|.|.+++++++ ++. ++.|+.+. +.+++++||
T Consensus 25 ~~k-~vlv~f~a~~C~~C~~~-~~~l~~l~~~~~--~v~-~~~vd~~~-----------------------~~~~~~~~~ 76 (112)
T 1syr_A 25 QNE-LVIVDFFAEWCGPCKRI-APFYEECSKTYT--KMV-FIKVDVDE-----------------------VSEVTEKEN 76 (112)
T ss_dssp HCS-EEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEETTT-----------------------THHHHHHTT
T ss_pred cCC-eEEEEEECCCCHHHHHH-HHHHHHHHHHcC--CCE-EEEEECCC-----------------------CHHHHHHcC
Confidence 355 67788999999999999 899999888875 577 88887754 236777887
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCCcccCCHHHHHhc
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~~~~~~a~~vL~~ 202 (203)
+.. .|+ +++. +|+++....+. +.++..+.|++
T Consensus 77 v~~-----------~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~ 109 (112)
T 1syr_A 77 ITS-----------MPT-FKVYKNGSSVDTLLGA-----NDSALKQLIEK 109 (112)
T ss_dssp CCS-----------SSE-EEEEETTEEEEEEESC-----CHHHHHHHHHT
T ss_pred CCc-----------ccE-EEEEECCcEEEEEeCC-----CHHHHHHHHHH
Confidence 753 354 5555 99998887653 23444555543
No 149
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.84 E-value=3.4e-09 Score=75.86 Aligned_cols=74 Identities=14% Similarity=0.305 Sum_probs=55.1
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+++.||++|||+|... .+.|+++.+++. ++. ++.|+.|. +.+++++||
T Consensus 25 ~~~-~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~--~v~-~~~v~~~~-----------------------~~~~~~~~~ 76 (113)
T 1ti3_A 25 SQK-LIVVDFTASWCPPCKMI-APIFAELAKKFP--NVT-FLKVDVDE-----------------------LKAVAEEWN 76 (113)
T ss_dssp SSS-EEEEEEECSSCHHHHHH-HHHHHHHHHHCS--SEE-EEEEETTT-----------------------CHHHHHHHH
T ss_pred cCC-eEEEEEECCCCHHHHHH-HHHHHHHHHhCC--CcE-EEEEEccc-----------------------cHHHHHhCC
Confidence 466 67788999999999998 899998888775 576 77787643 345777787
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++..+.+.
T Consensus 77 v~~-----------~Pt~~~~~~G~~~~~~~g~ 98 (113)
T 1ti3_A 77 VEA-----------MPTFIFLKDGKLVDKTVGA 98 (113)
T ss_dssp CSS-----------TTEEEEEETTEEEEEEECC
T ss_pred CCc-----------ccEEEEEeCCEEEEEEecC
Confidence 743 3544455699999888763
No 150
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.84 E-value=5.3e-09 Score=74.06 Aligned_cols=75 Identities=15% Similarity=0.157 Sum_probs=57.1
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+++.||++|||.|... .|.++++++++++ .+. ++.|..| .+.++++.||
T Consensus 20 ~~~-~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~-~~~-~~~v~~~-----------------------~~~~~~~~~~ 72 (109)
T 3tco_A 20 NNK-LVLVDCWAEWCAPCHLY-EPIYKKVAEKYKG-KAV-FGRLNVD-----------------------ENQKIADKYS 72 (109)
T ss_dssp HSS-EEEEEEECTTCHHHHHH-HHHHHHHHHHTTT-TSE-EEEEETT-----------------------TCHHHHHHTT
T ss_pred cCC-eEEEEEECCCCHHHHhh-hHHHHHHHHHhCC-Cce-EEEEccc-----------------------cCHHHHHhcC
Confidence 355 67788999999999999 8999999998875 366 7777653 3446777787
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....+.
T Consensus 73 i~~-----------~Pt~~~~~~g~~~~~~~g~ 94 (109)
T 3tco_A 73 VLN-----------IPTTLIFVNGQLVDSLVGA 94 (109)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred ccc-----------CCEEEEEcCCcEEEeeecc
Confidence 753 4666666799999987653
No 151
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=3.4e-09 Score=77.92 Aligned_cols=71 Identities=11% Similarity=0.229 Sum_probs=54.7
Q ss_pred cccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHH
Q 028808 71 DIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHK 150 (203)
Q Consensus 71 dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~ 150 (203)
++++++ +|+.||++||++|... .|.|.++++++++.++. ++.|..+. +.++++
T Consensus 19 ~~~~~~--vlv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~v~-~~~vd~~~-----------------------~~~~~~ 71 (126)
T 1x5e_A 19 ELLEGD--WMIEFYAPWCPACQNL-QPEWESFAEWGEDLEVN-IAKVDVTE-----------------------QPGLSG 71 (126)
T ss_dssp HHTSSE--EEEEEECSSCHHHHHH-HHHHHHHHHHHGGGTCE-EEEEETTT-----------------------CHHHHH
T ss_pred HHhCCC--EEEEEECCCCHHHHHH-hHHHHHHHHHhccCCeE-EEEEECcC-----------------------CHHHHH
Confidence 434543 6788999999999999 89999999999876787 88887653 345778
Q ss_pred HcCCccccccccCCCCcceEEEEEeCCEE
Q 028808 151 SLDLGKDLSAALLGPRSERWSAYVEDGRI 179 (203)
Q Consensus 151 ~yGv~~~~~~~g~~~~~~r~tfIIddG~I 179 (203)
.|++.. .|+.+++.+|++
T Consensus 72 ~~~v~~-----------~Pt~~~~~~G~~ 89 (126)
T 1x5e_A 72 RFIINA-----------LPTIYHCKDGEF 89 (126)
T ss_dssp HTTCCS-----------SSEEEEEETTEE
T ss_pred HcCCcc-----------cCEEEEEeCCeE
Confidence 888743 466777789986
No 152
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.84 E-value=6.4e-09 Score=73.40 Aligned_cols=73 Identities=15% Similarity=0.210 Sum_probs=55.2
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+++.|+++|||+|... .|.|+++.++++ .++. ++.|+.+. +.++++.||
T Consensus 19 ~~~-~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~-~~~~-~~~v~~~~-----------------------~~~~~~~~~ 71 (106)
T 1xwb_A 19 SGK-LVVLDFFATWCGPCKMI-SPKLVELSTQFA-DNVV-VLKVDVDE-----------------------CEDIAMEYN 71 (106)
T ss_dssp TTS-EEEEEEECTTCHHHHHH-HHHHHHHHHHTT-TTEE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-EEEEEEECCcCHHHHHh-hHHHHHHHHHhC-CCeE-EEEEeccc-----------------------hHHHHHHcC
Confidence 566 67778999999999998 899999888875 3566 77777652 356778888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+.. .|+ +++. +|+++..+.+
T Consensus 72 v~~-----------~Pt-~~~~~~G~~~~~~~g 92 (106)
T 1xwb_A 72 ISS-----------MPT-FVFLKNGVKVEEFAG 92 (106)
T ss_dssp CCS-----------SSE-EEEEETTEEEEEEES
T ss_pred CCc-----------ccE-EEEEcCCcEEEEEcC
Confidence 753 354 5554 9999988765
No 153
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.83 E-value=7.6e-09 Score=73.11 Aligned_cols=75 Identities=11% Similarity=0.142 Sum_probs=56.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+++.|+++|||.|... .|.|.++.+++.+ ++. ++.|+.+. +.++++.||
T Consensus 17 ~~~-~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 69 (109)
T 2yzu_A 17 QHP-LVLVDFWAEWCAPCRMI-APILEEIAKEYEG-KLL-VAKLDVDE-----------------------NPKTAMRYR 69 (109)
T ss_dssp HCS-EEEEEEECTTCHHHHHH-HHHHHHHHHHTBT-TBE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-eEEEEEECCCCHHHHHh-hHHHHHHHHHhhC-ceE-EEEEECCC-----------------------CHhHHHhCC
Confidence 355 67778999999999998 8999999888864 376 88887654 345777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|++++...+.
T Consensus 70 v~~-----------~Pt~~~~~~g~~~~~~~g~ 91 (109)
T 2yzu_A 70 VMS-----------IPTVILFKDGQPVEVLVGA 91 (109)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------CCEEEEEeCCcEeeeEeCC
Confidence 753 4666666899999877653
No 154
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.83 E-value=2.9e-09 Score=79.86 Aligned_cols=80 Identities=10% Similarity=0.047 Sum_probs=59.2
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccc
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKD 157 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~ 157 (203)
++|+.||++|||+|..+ +|.|++++++++ +. ++.|+.++.... .. .|.+.+++++||+..
T Consensus 33 ~vlv~F~a~wC~~C~~~-~p~l~~l~~~~~---v~-~~~vd~~~~~~~-~~-------------~d~~~~l~~~~~v~~- 92 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRD-WPQLIQASKEVD---VP-IVMFIWGSLIGE-RE-------------LSAARLEMNKAGVEG- 92 (135)
T ss_dssp SEEEEEEETTCHHHHHH-HHHHHHHHTTCC---SC-EEEEEECTTCCH-HH-------------HHHHHHHHHHHTCCS-
T ss_pred cEEEEEECCcCHhhhHh-ChhHHHHHHHCC---CE-EEEEECCCchhh-hh-------------hhhhHHHHHHcCCce-
Confidence 67888999999999999 899999887764 77 999988664221 11 133466788898853
Q ss_pred cccccCCCCcceEEEEE-eCCEEEEEEeecCC
Q 028808 158 LSAALLGPRSERWSAYV-EDGRIKALNVEEAP 188 (203)
Q Consensus 158 ~~~~g~~~~~~r~tfII-ddG~I~~~~~~~~~ 188 (203)
.| ||++ ++|+++....+..+
T Consensus 93 ----------~P-t~~~~~~G~~v~~~~G~~~ 113 (135)
T 3emx_A 93 ----------TP-TLVFYKEGRIVDKLVGATP 113 (135)
T ss_dssp ----------SS-EEEEEETTEEEEEEESCCC
T ss_pred ----------eC-eEEEEcCCEEEEEEeCCCC
Confidence 46 4555 59999999887543
No 155
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.83 E-value=6e-09 Score=73.43 Aligned_cols=74 Identities=12% Similarity=0.211 Sum_probs=55.1
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++ .+++.|+++|||.|... .|.++++++++++. +. ++.|+.++ +.++++.||+
T Consensus 18 ~~-~~~v~f~~~~C~~C~~~-~~~~~~~~~~~~~~-~~-~~~v~~~~-----------------------~~~~~~~~~v 70 (105)
T 1fb6_A 18 EV-PVMVDFWAPWCGPCKLI-APVIDELAKEYSGK-IA-VYKLNTDE-----------------------APGIATQYNI 70 (105)
T ss_dssp SS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTTT-CE-EEEEETTT-----------------------CHHHHHHTTC
T ss_pred CC-cEEEEEECCCChHHHHH-HHHHHHHHHHhcCc-eE-EEEEcCcc-----------------------hHHHHHhCCC
Confidence 45 56778999999999998 89999988888653 76 77777653 3467778877
Q ss_pred ccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
.. .|+.+++.+|+++..+.+.
T Consensus 71 ~~-----------~Pt~~~~~~g~~~~~~~G~ 91 (105)
T 1fb6_A 71 RS-----------IPTVLFFKNGERKESIIGA 91 (105)
T ss_dssp CS-----------SSEEEEEETTEEEEEEEEC
T ss_pred Cc-----------ccEEEEEeCCeEEEEEecC
Confidence 53 3554444599999888764
No 156
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.83 E-value=5.6e-09 Score=76.06 Aligned_cols=73 Identities=16% Similarity=0.279 Sum_probs=55.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+|+.||++|||+|... .|.|+++++++++ +. ++.|+.|. +.+++++||
T Consensus 33 ~~~-~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~~--~~-~~~vd~~~-----------------------~~~~~~~~~ 84 (122)
T 2vlu_A 33 AKK-LVVIDFTASWCGPCRIM-APVFADLAKKFPN--AV-FLKVDVDE-----------------------LKPIAEQFS 84 (122)
T ss_dssp TTC-CEEEEEECTTCHHHHHH-HHHHHHHHHHCTT--SE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCC-EEEEEEECCCCHHHHHH-HHHHHHHHHHCCC--cE-EEEEECCC-----------------------CHHHHHHcC
Confidence 456 56778899999999999 8999998888764 77 88887754 346778888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
+.. .|+ |++. +|+++..+.+.
T Consensus 85 v~~-----------~Pt-~~~~~~G~~~~~~~G~ 106 (122)
T 2vlu_A 85 VEA-----------MPT-FLFMKEGDVKDRVVGA 106 (122)
T ss_dssp CCS-----------SSE-EEEEETTEEEEEEESS
T ss_pred CCc-----------ccE-EEEEeCCEEEEEEeCc
Confidence 753 354 5555 99999887653
No 157
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.82 E-value=3.9e-09 Score=79.13 Aligned_cols=77 Identities=5% Similarity=0.166 Sum_probs=55.8
Q ss_pred cccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchH
Q 028808 69 IKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSF 148 (203)
Q Consensus 69 L~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v 148 (203)
+++ .+|| ++|+.||++||++|... .|.|+++.+++ ++. ++.|..+. +.++
T Consensus 35 l~~-~~~k-~vvv~F~a~wC~~C~~~-~p~l~~l~~~~---~v~-~~~vd~~~-----------------------~~~l 84 (133)
T 3cxg_A 35 FSS-TQNS-SIVIKFGAVWCKPCNKI-KEYFKNQLNYY---YVT-LVDIDVDI-----------------------HPKL 84 (133)
T ss_dssp HTC--CCS-EEEEEEECTTCHHHHHT-HHHHHGGGGTE---ECE-EEEEETTT-----------------------CHHH
T ss_pred HHh-cCCC-EEEEEEECCCCHHHHHH-HHHHHHHHHhc---CEE-EEEEeccc-----------------------hHHH
Confidence 445 3666 67788999999999999 89998877655 466 77776442 4568
Q ss_pred HHHcCCccccccccCCCCcceEEEEE-e-CCE--EEEEEeec
Q 028808 149 HKSLDLGKDLSAALLGPRSERWSAYV-E-DGR--IKALNVEE 186 (203)
Q Consensus 149 ~~~yGv~~~~~~~g~~~~~~r~tfII-d-dG~--I~~~~~~~ 186 (203)
++.||+.. .|+++++ + ||+ ++....+.
T Consensus 85 ~~~~~v~~-----------~Pt~~~~~~~~g~g~~~~~~~G~ 115 (133)
T 3cxg_A 85 NDQHNIKA-----------LPTFEFYFNLNNEWVLVHTVEGA 115 (133)
T ss_dssp HHHTTCCS-----------SSEEEEEEEETTEEEEEEEEESC
T ss_pred HHhcCCCC-----------CCEEEEEEecCCCeEEEEEEcCC
Confidence 88888753 4777777 5 777 88877653
No 158
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.82 E-value=6.7e-09 Score=79.46 Aligned_cols=74 Identities=1% Similarity=0.035 Sum_probs=57.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ ++|+.||++||++|... .|.|+++++++. ++. ++.|..+. +.++++.||
T Consensus 31 ~~~-~vvv~F~a~wC~~C~~~-~p~l~~l~~~~~--~v~-~~~vd~~~-----------------------~~~l~~~~~ 82 (153)
T 2wz9_A 31 AKS-LLVVHFWAPWAPQCAQM-NEVMAELAKELP--QVS-FVKLEAEG-----------------------VPEVSEKYE 82 (153)
T ss_dssp TTS-CEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEETTT-----------------------SHHHHHHTT
T ss_pred CCC-eEEEEEECCCCHhHHHH-HHHHHHHHHHcC--CeE-EEEEECCC-----------------------CHHHHHHcC
Confidence 366 57778999999999999 899999888873 577 88887654 346778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++++|+++....+.
T Consensus 83 v~~-----------~Pt~~~~~~G~~~~~~~G~ 104 (153)
T 2wz9_A 83 ISS-----------VPTFLFFKNSQKIDRLDGA 104 (153)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESS
T ss_pred CCC-----------CCEEEEEECCEEEEEEeCC
Confidence 753 4777888899998887653
No 159
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.82 E-value=3e-09 Score=77.22 Aligned_cols=71 Identities=17% Similarity=0.254 Sum_probs=53.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+++.||++|||+|... .|.++++++++ ++. ++.|+.|. +.+++++||
T Consensus 32 ~~~-~~vv~f~a~wC~~C~~~-~~~~~~~~~~~---~~~-~~~vd~~~-----------------------~~~~~~~~~ 82 (117)
T 2xc2_A 32 KNK-LVVVDFFATWCGPCKTI-APLFKELSEKY---DAI-FVKVDVDK-----------------------LEETARKYN 82 (117)
T ss_dssp TTS-CEEEEEECTTCHHHHHH-HHHHHHHHTTS---SSE-EEEEETTT-----------------------SHHHHHHTT
T ss_pred CCC-EEEEEEECCCCHhHHHH-hHHHHHHHHHc---CcE-EEEEECCc-----------------------cHHHHHHcC
Confidence 566 56778999999999998 89999887766 677 88887653 346778888
Q ss_pred CccccccccCCCCcceEEEEE-eCCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYV-EDGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfII-ddG~I~~~~~~ 185 (203)
+.. .|+ +++ .+|+++....+
T Consensus 83 v~~-----------~Pt-~~~~~~G~~~~~~~G 103 (117)
T 2xc2_A 83 ISA-----------MPT-FIAIKNGEKVGDVVG 103 (117)
T ss_dssp CCS-----------SSE-EEEEETTEEEEEEES
T ss_pred CCc-----------cce-EEEEeCCcEEEEEeC
Confidence 753 354 555 49999988776
No 160
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.81 E-value=4.2e-09 Score=80.18 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=56.0
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++ +||+.||++||++|... .|.|++++++++. .+. ++.|..|. +.+++++||+
T Consensus 23 ~k-~vlv~F~a~wC~~C~~~-~p~l~~l~~~~~~-~v~-~~~vd~d~-----------------------~~~~~~~~~i 75 (142)
T 1qgv_A 23 DR-VVVIRFGHDWDPTCMKM-DEVLYSIAEKVKN-FAV-IYLVDITE-----------------------VPDFNKMYEL 75 (142)
T ss_dssp SS-EEEEEEECTTSHHHHHH-HHHHHHHHHHHTT-TEE-EEEEETTT-----------------------CCTTTTSSCS
T ss_pred CC-EEEEEEECCCCHHHHHH-HHHHHHHHHHhCC-CeE-EEEEcccc-----------------------CHHHHHHcCC
Confidence 55 67889999999999999 8999999999864 366 88887653 1235667777
Q ss_pred ccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
. ..|+++++++|+++....+.
T Consensus 76 ~-----------~~Pt~~~~~~G~~v~~~~g~ 96 (142)
T 1qgv_A 76 Y-----------DPCTVMFFFRNKHIMIDLGT 96 (142)
T ss_dssp C-----------SSCEEEEEETTEEEEEECC-
T ss_pred C-----------CCCEEEEEECCcEEEEecCC
Confidence 4 35777777899998876653
No 161
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.79 E-value=9.7e-09 Score=74.10 Aligned_cols=74 Identities=11% Similarity=0.080 Sum_probs=55.4
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+|+.||++|||+|... .|.|.++.+++. ++. ++.|..+. +.+++++||
T Consensus 18 ~~~-~~vv~f~a~wC~~C~~~-~~~l~~~~~~~~--~v~-~~~vd~~~-----------------------~~~l~~~~~ 69 (110)
T 2l6c_A 18 GLS-DAIVFFHKNLCPHCKNM-EKVLDKFGARAP--QVA-ISSVDSEA-----------------------RPELMKELG 69 (110)
T ss_dssp TCS-EEEEEEECSSCSTHHHH-HHHHHHHHTTCT--TSC-EEEEEGGG-----------------------CHHHHHHTT
T ss_pred cCC-CEEEEEECCCCHhHHHH-HHHHHHHHHHCC--CcE-EEEEcCcC-----------------------CHHHHHHcC
Confidence 455 57778999999999998 899888777664 576 77776543 445778888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....+.
T Consensus 70 v~~-----------~Pt~~~~~~G~~v~~~~G~ 91 (110)
T 2l6c_A 70 FER-----------VPTLVFIRDGKVAKVFSGI 91 (110)
T ss_dssp CCS-----------SCEEEEEESSSEEEEEESC
T ss_pred Ccc-----------cCEEEEEECCEEEEEEcCC
Confidence 753 4666677899999888763
No 162
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.79 E-value=7.4e-09 Score=73.07 Aligned_cols=74 Identities=14% Similarity=0.228 Sum_probs=56.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+++.||++|||+|... .|.++++.+++++ +. ++.|..|. +.++++.||
T Consensus 19 ~~~-~~~v~f~~~~C~~C~~~-~~~~~~~~~~~~~--~~-~~~vd~~~-----------------------~~~~~~~~~ 70 (105)
T 3m9j_A 19 GDK-LVVVDFSATWCGPCKMI-KPFFHSLSEKYSN--VI-FLEVDVDD-----------------------CQDVASESE 70 (105)
T ss_dssp TTS-CEEEEEECTTCHHHHHH-HHHHHHHHHHSTT--SE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-eEEEEEECCCChhhHHH-HHHHHHHHHHccC--eE-EEEEEhhh-----------------------hHHHHHHcC
Confidence 566 57778999999999999 8999999888754 77 88887653 345777887
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++++|+++....+.
T Consensus 71 v~~-----------~Pt~~~~~~g~~~~~~~g~ 92 (105)
T 3m9j_A 71 VKS-----------MPTFQFFKKGQKVGEFSGA 92 (105)
T ss_dssp CCB-----------SSEEEEEETTEEEEEEESS
T ss_pred CCc-----------CcEEEEEECCeEEEEEeCC
Confidence 753 4666667899998887654
No 163
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.79 E-value=7.8e-09 Score=76.12 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=53.5
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++ .+|+.||++||++|... .|.|.++++++++. +. ++.|..| .+.++++.|++
T Consensus 35 ~~-~~lv~f~a~wC~~C~~~-~~~~~~~~~~~~~~-~~-~~~vd~~-----------------------~~~~l~~~~~v 87 (130)
T 2dml_A 35 DG-LWLVEFYAPWCGHCQRL-TPEWKKAATALKDV-VK-VGAVNAD-----------------------KHQSLGGQYGV 87 (130)
T ss_dssp SS-CEEEEEECTTCSTTGGG-HHHHHHHHHHTTTT-SE-EEEEETT-----------------------TCHHHHHHHTC
T ss_pred CC-eEEEEEECCCCHHHHhh-CHHHHHHHHHhcCc-eE-EEEEeCC-----------------------CCHHHHHHcCC
Confidence 45 67788999999999999 89999999888653 66 7777653 34567888887
Q ss_pred ccccccccCCCCcceEEEEEe-CCEEEEEEe
Q 028808 155 GKDLSAALLGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
.. .|+.++++ +|+++....
T Consensus 88 ~~-----------~Pt~~~~~~~~~~~~~~~ 107 (130)
T 2dml_A 88 QG-----------FPTIKIFGANKNKPEDYQ 107 (130)
T ss_dssp CS-----------SSEEEEESSCTTSCEECC
T ss_pred Cc-----------cCEEEEEeCCCCeEEEee
Confidence 53 47788888 666455544
No 164
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.27 E-value=6.5e-10 Score=82.13 Aligned_cols=85 Identities=11% Similarity=0.099 Sum_probs=57.8
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhH---HHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEE
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSY---KNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFY 141 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l---~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpll 141 (203)
+.++++. .+|| ++|+.||++|||+|... .|.+ .++.+.+++ ++. ++.|..++.
T Consensus 10 ~~~~~~~-~~~k-~vlv~f~a~wC~~C~~~-~~~~~~~~~~~~~~~~-~~~-~~~vd~~~~------------------- 65 (130)
T 2lst_A 10 EALALAQ-AHGR-MVMVYFHSEHCPYCQQM-NTFVLSDPGVSRLLEA-RFV-VASVSVDTP------------------- 65 (130)
Confidence 5677777 3777 67778999999999998 7888 676666654 365 666665431
Q ss_pred eeCCchHHHHcCCccccccccCCCCcceEEEEEe--CCEE--EEEEeec
Q 028808 142 GDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE--DGRI--KALNVEE 186 (203)
Q Consensus 142 sD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId--dG~I--~~~~~~~ 186 (203)
.+.++++.||+.. .|+++++| +|++ +....+.
T Consensus 66 --~~~~~~~~~~v~~-----------~Pt~~~~d~~~G~~~~~~~~~G~ 101 (130)
T 2lst_A 66 --EGQELARRYRVPG-----------TPTFVFLVPKAGAWEEVGRLFGS 101 (130)
Confidence 2345666777642 46677886 5888 6666553
No 165
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.78 E-value=1.1e-08 Score=74.04 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=56.2
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+|+.|+++|||+|... .|.|.++.++++. ++. ++.|+.+. +.+++++||
T Consensus 29 ~~~-~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 81 (121)
T 2i1u_A 29 SNK-PVLVDFWATWCGPCKMV-APVLEEIATERAT-DLT-VAKLDVDT-----------------------NPETARNFQ 81 (121)
T ss_dssp CSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTT-TCE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-cEEEEEECCCCHHHHHH-HHHHHHHHHHhcC-CeE-EEEEECCC-----------------------CHHHHHhcC
Confidence 355 56778999999999999 8999999888864 477 88887653 345777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++++|+++....+.
T Consensus 82 i~~-----------~Pt~~~~~~g~~~~~~~G~ 103 (121)
T 2i1u_A 82 VVS-----------IPTLILFKDGQPVKRIVGA 103 (121)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------CCEEEEEECCEEEEEecCC
Confidence 753 3655555699998887654
No 166
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.78 E-value=7.3e-09 Score=75.88 Aligned_cols=74 Identities=14% Similarity=0.151 Sum_probs=58.0
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
|+ ++|+.||++|||+|... .|.|.++++++ .++. ++.|+.+. +.++++.||+
T Consensus 23 ~~-~vlv~f~a~wC~~C~~~-~~~l~~l~~~~--~~v~-~~~vd~~~-----------------------~~~~~~~~~i 74 (118)
T 2f51_A 23 PG-LVLVDFFATWCGPCQRL-GQILPSIAEAN--KDVT-FIKVDVDK-----------------------NGNAADAYGV 74 (118)
T ss_dssp SS-CEEEEEECTTCHHHHHH-HHHHHHHHHHC--TTSE-EEEEETTT-----------------------CHHHHHHTTC
T ss_pred CC-EEEEEEECCCCHHHHHH-HHHHHHHHHHC--CCeE-EEEEECCC-----------------------CHHHHHhcCC
Confidence 55 67778999999999998 89999988887 4677 88887754 2457788887
Q ss_pred ccccccccCCCCcceEEEEEeC----CEEEEEEeecC
Q 028808 155 GKDLSAALLGPRSERWSAYVED----GRIKALNVEEA 187 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIdd----G~I~~~~~~~~ 187 (203)
.. .|+.+++++ |+++....+..
T Consensus 75 ~~-----------~Pt~~~~~~~~~~G~~~~~~~G~~ 100 (118)
T 2f51_A 75 SS-----------IPALFFVKKEGNEIKTLDQFVGAD 100 (118)
T ss_dssp CS-----------SSEEEEEEEETTEEEEEEEEESCC
T ss_pred CC-----------CCEEEEEeCCCCcceEEEeecCCC
Confidence 53 476777776 99999988753
No 167
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.78 E-value=1.1e-08 Score=71.90 Aligned_cols=73 Identities=14% Similarity=0.272 Sum_probs=55.3
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+++.||++|||.|... .+.|.++.+++. ++. ++.|+.+. +.++++.||
T Consensus 18 ~~~-~~~v~f~~~~C~~C~~~-~~~l~~~~~~~~--~~~-~~~v~~~~-----------------------~~~~~~~~~ 69 (104)
T 2vim_A 18 KGR-LIVVDFFAQWCGPCRNI-APKVEALAKEIP--EVE-FAKVDVDQ-----------------------NEEAAAKYS 69 (104)
T ss_dssp TTS-CEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred CCC-eEEEEEECCCCHHHHHh-hHHHHHHHHHCC--CCE-EEEEeccC-----------------------CHHHHHHcC
Confidence 566 56778899999999998 899999888875 677 88887753 345777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
+.. .|+.+++++|+++....+
T Consensus 70 v~~-----------~Pt~~~~~~g~~~~~~~G 90 (104)
T 2vim_A 70 VTA-----------MPTFVFIKDGKEVDRFSG 90 (104)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEES
T ss_pred Ccc-----------ccEEEEEeCCcEEEEEeC
Confidence 753 365444459999988775
No 168
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.76 E-value=1.3e-08 Score=72.58 Aligned_cols=74 Identities=8% Similarity=0.093 Sum_probs=55.6
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+++.||++|||+|... .|.|+++++++. ++. ++.|..|. +.++++.||
T Consensus 20 ~~~-~v~v~f~a~wC~~C~~~-~~~~~~~~~~~~--~~~-~~~vd~~~-----------------------~~~~~~~~~ 71 (107)
T 1gh2_A 20 GSR-LAVVKFTMRGCGPCLRI-APAFSSMSNKYP--QAV-FLEVDVHQ-----------------------CQGTAATNN 71 (107)
T ss_dssp TTS-CEEEEEECSSCHHHHHH-HHHHHHHHHHCT--TSE-EEEEETTT-----------------------SHHHHHHTT
T ss_pred CCC-EEEEEEECCCChhhHHH-HHHHHHHHHHCC--CcE-EEEEECcc-----------------------CHHHHHhcC
Confidence 455 57778999999999999 899999888873 577 88887653 245777787
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....+.
T Consensus 72 v~~-----------~Pt~~~~~~G~~~~~~~G~ 93 (107)
T 1gh2_A 72 ISA-----------TPTFQFFRNKVRIDQYQGA 93 (107)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESS
T ss_pred CCc-----------ccEEEEEECCeEEEEEeCC
Confidence 753 4655555699999887763
No 169
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.76 E-value=1.3e-08 Score=74.08 Aligned_cols=78 Identities=12% Similarity=0.133 Sum_probs=54.6
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.|+ .+++.||++|||+|... .|.|.++++++. .. ++.+..+..... |...++++.||
T Consensus 28 ~~~-~~~v~f~a~wC~~C~~~-~p~l~~~~~~~~---~~-v~~~~~~~~~~~-----------------~~~~~~~~~~~ 84 (118)
T 1zma_A 28 KKE-TATFFIGRKTCPYCRKF-AGTLSGVVAETK---AH-IYFINSEEPSQL-----------------NDLQAFRSRYG 84 (118)
T ss_dssp TTC-CEEEEEECTTCHHHHHH-HHHHHHHHHHHC---CC-CEEEETTCGGGH-----------------HHHHHHHHHHT
T ss_pred CCC-eEEEEEECCCCccHHHH-HHHHHHHHHhcC---Ce-EEEEECCCcCcH-----------------HHHHHHHHHcC
Confidence 455 57788999999999999 899999887763 45 777777653211 11234667777
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
+.. .|+.+++++|+++....+
T Consensus 85 i~~-----------~Pt~~~~~~G~~~~~~~G 105 (118)
T 1zma_A 85 IPT-----------VPGFVHITDGQINVRCDS 105 (118)
T ss_dssp CCS-----------SCEEEEEETTEEEEECCT
T ss_pred CCC-----------CCeEEEEECCEEEEEecC
Confidence 743 466677789998876543
No 170
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.76 E-value=6.7e-09 Score=84.38 Aligned_cols=75 Identities=12% Similarity=0.242 Sum_probs=57.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
++| +||+.||++||++|... +|.|++++++++++ +. ++.|+.|. +..++++||
T Consensus 29 ~~k-~vvv~F~a~wC~~C~~~-~p~l~~l~~~~~~~-v~-~~~vd~d~-----------------------~~~l~~~~~ 81 (222)
T 3dxb_A 29 ADG-AILVDFWAEWCGPCKMI-APILDEIADEYQGK-LT-VAKLNIDQ-----------------------NPGTAPKYG 81 (222)
T ss_dssp CSS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTTT-CE-EEEEETTT-----------------------CTTTGGGGT
T ss_pred cCC-EEEEEEECCcCHHHHHH-HHHHHHHHHHhcCC-cE-EEEEECCC-----------------------CHHHHHHcC
Confidence 345 67788999999999999 99999999998754 77 88887653 334667788
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++++|+++....+.
T Consensus 82 v~~-----------~Pt~~~~~~G~~~~~~~G~ 103 (222)
T 3dxb_A 82 IRG-----------IPTLLLFKNGEVAATKVGA 103 (222)
T ss_dssp CCS-----------BSEEEEEETTEEEEEEESC
T ss_pred CCc-----------CCEEEEEECCeEEEEeccc
Confidence 753 4666666799999887754
No 171
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.76 E-value=1.2e-08 Score=73.40 Aligned_cols=73 Identities=21% Similarity=0.357 Sum_probs=54.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+|+.||++|||+|... .|.|+++.++++ ++. ++.|+.|. +.++++.||
T Consensus 27 ~~~-~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~--~~~-~~~v~~~~-----------------------~~~~~~~~~ 78 (118)
T 2vm1_A 27 TGK-LVIIDFTASWCGPCRVI-APVFAEYAKKFP--GAI-FLKVDVDE-----------------------LKDVAEAYN 78 (118)
T ss_dssp HTC-CEEEEEECTTCHHHHHH-HHHHHHHHHHCT--TSE-EEEEETTT-----------------------SHHHHHHTT
T ss_pred CCC-EEEEEEECCCCHhHHHH-hHHHHHHHHHCC--CcE-EEEEEccc-----------------------CHHHHHHcC
Confidence 366 56778999999999998 899999888875 677 88887643 356777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
+.. .|+.+++.+|+++....+
T Consensus 79 v~~-----------~Pt~~~~~~g~~~~~~~g 99 (118)
T 2vm1_A 79 VEA-----------MPTFLFIKDGEKVDSVVG 99 (118)
T ss_dssp CCS-----------BSEEEEEETTEEEEEEES
T ss_pred CCc-----------CcEEEEEeCCeEEEEecC
Confidence 753 355444459999988765
No 172
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.75 E-value=1.3e-08 Score=72.57 Aligned_cols=75 Identities=16% Similarity=0.282 Sum_probs=56.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+++.||++||++|... .|.+.++.+++.+ .+. ++.|..+. +.+++++||
T Consensus 21 ~~~-~vlv~f~a~~C~~C~~~-~~~~~~~~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 73 (111)
T 3gnj_A 21 EGK-ACLVMFSRKNCHVCQKV-TPVLEELRLNYEE-SFG-FYYVDVEE-----------------------EKTLFQRFS 73 (111)
T ss_dssp SCC-CEEEEEECSSCHHHHHH-HHHHHHHHHHTTT-TSE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCC-EEEEEEeCCCChhHHHH-HHHHHHHHHHcCC-ceE-EEEEECCc-----------------------ChhHHHhcC
Confidence 344 67778999999999998 8999999888865 376 88887643 346777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++....+.
T Consensus 74 v~~-----------~Pt~~~~~~g~~~~~~~g~ 95 (111)
T 3gnj_A 74 LKG-----------VPQILYFKDGEYKGKMAGD 95 (111)
T ss_dssp CCS-----------SCEEEEEETTEEEEEEESS
T ss_pred CCc-----------CCEEEEEECCEEEEEEecc
Confidence 753 4666677899998877653
No 173
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.74 E-value=1.4e-08 Score=76.42 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=55.9
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++ .+|+.||++||++|... .|.|.+++++++++ +. ++.|..+. +.++++.||+
T Consensus 24 ~~-~vlv~F~a~wC~~C~~~-~~~l~~l~~~~~~~-v~-~~~vd~~~-----------------------~~~l~~~~~v 76 (140)
T 3hz4_A 24 KK-PVVVMFYSPACPYCKAM-EPYFEEYAKEYGSS-AV-FGRINIAT-----------------------NPWTAEKYGV 76 (140)
T ss_dssp SS-CEEEEEECTTCHHHHHH-HHHHHHHHHHHTTT-SE-EEEEETTT-----------------------CHHHHHHHTC
T ss_pred CC-cEEEEEECCCChhHHHH-HHHHHHHHHHhCCc-eE-EEEEECCc-----------------------CHhHHHHCCC
Confidence 45 67778999999999999 89999999998763 76 88787543 3457778887
Q ss_pred ccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
.. .|+.+++.+|+++....+.
T Consensus 77 ~~-----------~Pt~~~~~~G~~~~~~~G~ 97 (140)
T 3hz4_A 77 QG-----------TPTFKFFCHGRPVWEQVGQ 97 (140)
T ss_dssp CE-----------ESEEEEEETTEEEEEEESS
T ss_pred Cc-----------CCEEEEEeCCcEEEEEcCC
Confidence 53 4644445699998887664
No 174
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.71 E-value=2.5e-08 Score=74.03 Aligned_cols=72 Identities=7% Similarity=0.128 Sum_probs=55.4
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+++ .+|+.||++||++|... .|.|.++++++. ++. ++.|..|. +.++++.||
T Consensus 36 ~~k-~vvv~F~a~wC~~C~~~-~p~l~~l~~~~~--~v~-~~~vd~d~-----------------------~~~l~~~~~ 87 (125)
T 1r26_A 36 EDI-LTVAWFTAVWCGPCKTI-ERPMEKIAYEFP--TVK-FAKVDADN-----------------------NSEIVSKCR 87 (125)
T ss_dssp SSS-CEEEEEECTTCHHHHHT-HHHHHHHHHHCT--TSE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCC-EEEEEEECCcCHhHHHH-HHHHHHHHHHCC--CCE-EEEEECCC-----------------------CHHHHHHcC
Confidence 455 57778999999999999 899999988873 577 88887753 345788888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+.. .|+ |++. +|+++....+
T Consensus 88 v~~-----------~Pt-~~i~~~G~~~~~~~G 108 (125)
T 1r26_A 88 VLQ-----------LPT-FIIARSGKMLGHVIG 108 (125)
T ss_dssp CCS-----------SSE-EEEEETTEEEEEEES
T ss_pred CCc-----------ccE-EEEEeCCeEEEEEeC
Confidence 753 354 5554 9999988765
No 175
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.70 E-value=1.3e-08 Score=72.40 Aligned_cols=75 Identities=9% Similarity=0.150 Sum_probs=53.1
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc--CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK--GIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKS 151 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~--gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~ 151 (203)
+++ .+|+.||++|||+|... .|.+.++.+++.+. ++. ++.|..+ .+.++++.
T Consensus 20 ~~~-~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~~~~~~~-~~~vd~~-----------------------~~~~l~~~ 73 (111)
T 3uvt_A 20 AEG-ITFIKFYAPWCGHCKTL-APTWEELSKKEFPGLAGVK-IAEVDCT-----------------------AERNICSK 73 (111)
T ss_dssp HSS-EEEEEEECSSCHHHHHH-HHHHHHHHTCCCCC-CCEE-EEEEETT-----------------------TCHHHHHH
T ss_pred cCC-cEEEEEECCCChhHHHh-hHHHHHHHHHhhccCCceE-EEEEecc-----------------------ccHhHHHh
Confidence 455 67788999999999998 89999887776533 444 5556543 23457778
Q ss_pred cCCccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 152 LDLGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 152 yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
||+.. .|+.+++.+|+++..+.+
T Consensus 74 ~~v~~-----------~Pt~~~~~~g~~~~~~~g 96 (111)
T 3uvt_A 74 YSVRG-----------YPTLLLFRGGKKVSEHSG 96 (111)
T ss_dssp TTCCS-----------SSEEEEEETTEEEEEECS
T ss_pred cCCCc-----------ccEEEEEeCCcEEEeccC
Confidence 88753 465555569999887754
No 176
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.70 E-value=4.7e-08 Score=72.25 Aligned_cols=75 Identities=11% Similarity=0.223 Sum_probs=52.7
Q ss_pred CCCeEEEEEeeCCCCC--------------CCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceE
Q 028808 74 KGKKVVIFGLPGAYTG--------------VCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIE 139 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp--------------~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fp 139 (203)
.|| .+|+.||++||| +|... .|.|+++++++++ .+. ++.|..|.
T Consensus 20 ~~k-~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~-~p~~~~l~~~~~~-~~~-~~~vd~d~------------------ 77 (123)
T 1oaz_A 20 ADG-AILVDFWAEWCGPIEESDDRRYDLVGPCKMI-APILDEIADEYQG-KLT-VAKLNIDQ------------------ 77 (123)
T ss_dssp CSS-EEEEEEECSSCSCBSSSTTSCCSCCCCCCTT-HHHHTTC--------CE-EEEEETTS------------------
T ss_pred CCC-eEEEEEECCCCccccccccccccCCCCcHHH-HHHHHHHHHHhcC-CeE-EEEEECCC------------------
Confidence 455 677889999999 99999 8999999888875 376 88887653
Q ss_pred EEeeCCchHHHHcCCccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 140 FYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 140 llsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.+++++||+.. .|+.+++.+|+++....+.
T Consensus 78 -----~~~l~~~~~v~~-----------~Pt~~~~~~G~~~~~~~G~ 108 (123)
T 1oaz_A 78 -----NPGTAPKYGIRG-----------IPTLLLFKNGEVAATKVGA 108 (123)
T ss_dssp -----CTTTGGGGTCCB-----------SSEEEEEESSSEEEEEESC
T ss_pred -----CHHHHHHcCCCc-----------cCEEEEEECCEEEEEEeCC
Confidence 345778888853 4667777899998877653
No 177
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.69 E-value=1.1e-08 Score=73.45 Aligned_cols=70 Identities=17% Similarity=0.322 Sum_probs=50.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG--IDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKS 151 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g--v~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~ 151 (203)
+++ .+++.||++|||+|... .|.|.++++++++.+ +. ++.|..+ .+.++++.
T Consensus 23 ~~~-~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~~~~~v~-~~~vd~~-----------------------~~~~~~~~ 76 (120)
T 1mek_A 23 AHK-YLLVEFYAPWCGHCKAL-APEYAKAAGKLKAEGSEIR-LAKVDAT-----------------------EESDLAQQ 76 (120)
T ss_dssp HCS-EEEEEEECSSCSTTSTT-HHHHHHHHHTTTTTCCCCB-CEEEETT-----------------------TCCSSHHH
T ss_pred cCC-eEEEEEECCCCHHHHHh-hHHHHHHHHHHhccCCcEE-EEEEcCC-----------------------CCHHHHHH
Confidence 455 67788999999999999 899999998887644 44 4444443 23467788
Q ss_pred cCCccccccccCCCCcceEEEEEeCCEEE
Q 028808 152 LDLGKDLSAALLGPRSERWSAYVEDGRIK 180 (203)
Q Consensus 152 yGv~~~~~~~g~~~~~~r~tfIIddG~I~ 180 (203)
||+.. .|+.+++.+|+++
T Consensus 77 ~~v~~-----------~Pt~~~~~~g~~~ 94 (120)
T 1mek_A 77 YGVRG-----------YPTIKFFRNGDTA 94 (120)
T ss_dssp HTCCS-----------SSEEEEEESSCSS
T ss_pred CCCCc-----------ccEEEEEeCCCcC
Confidence 88753 4667777888765
No 178
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.68 E-value=2.8e-08 Score=74.43 Aligned_cols=75 Identities=12% Similarity=0.132 Sum_probs=56.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
++++ +|+.||++|||+|... .|.|+++++++.+ ++. ++.|+.+. +.++++.||
T Consensus 49 ~~~~-vvv~f~~~~C~~C~~~-~~~l~~l~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 101 (140)
T 1v98_A 49 GAPL-TLVDFFAPWCGPCRLV-SPILEELARDHAG-RLK-VVKVNVDE-----------------------HPGLAARYG 101 (140)
T ss_dssp CCCE-EEEEEECTTCHHHHHH-HHHHHHHHHHTTT-TEE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCCC-EEEEEECCCCHHHHHH-HHHHHHHHHHccC-ceE-EEEEECCC-----------------------CHHHHHHCC
Confidence 4455 7888999999999999 8999999988864 366 88887653 235777888
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++..+.+.
T Consensus 102 v~~-----------~Pt~~~~~~G~~~~~~~G~ 123 (140)
T 1v98_A 102 VRS-----------VPTLVLFRRGAPVATWVGA 123 (140)
T ss_dssp CCS-----------SSEEEEEETTEEEEEEESC
T ss_pred CCc-----------cCEEEEEeCCcEEEEEeCC
Confidence 753 4656666799999887754
No 179
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.68 E-value=2.2e-08 Score=80.99 Aligned_cols=70 Identities=16% Similarity=0.278 Sum_probs=54.0
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG--IDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKS 151 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g--v~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~ 151 (203)
+|+ ++++.||++||++|... +|.|.++++++++.+ +. ++.|..+ .+.+++++
T Consensus 31 ~~~-~v~v~F~a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~-~~~vd~~-----------------------~~~~l~~~ 84 (241)
T 3idv_A 31 DKD-TVLLEFYAPWCGHCKQF-APEYEKIANILKDKDPPIP-VAKIDAT-----------------------SASVLASR 84 (241)
T ss_dssp TCS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHHTSSSCCC-EEEEETT-----------------------TCHHHHHH
T ss_pred cCC-eEEEEEECCCCHHHHHh-hHHHHHHHHHHhhcCCceE-EEEEecc-----------------------CCHHHHHh
Confidence 455 68889999999999999 899999999998776 66 6667553 23467788
Q ss_pred cCCccccccccCCCCcceEEEEEeCCEEE
Q 028808 152 LDLGKDLSAALLGPRSERWSAYVEDGRIK 180 (203)
Q Consensus 152 yGv~~~~~~~g~~~~~~r~tfIIddG~I~ 180 (203)
||+.. .|+.+++++|+++
T Consensus 85 ~~v~~-----------~Pt~~~~~~g~~~ 102 (241)
T 3idv_A 85 FDVSG-----------YPTIKILKKGQAV 102 (241)
T ss_dssp TTCCS-----------SSEEEEEETTEEE
T ss_pred cCCCc-----------CCEEEEEcCCCcc
Confidence 88753 4666677777766
No 180
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.67 E-value=7.3e-09 Score=75.44 Aligned_cols=72 Identities=11% Similarity=0.065 Sum_probs=52.9
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++ .+|+.||++||++|... .|.|+++++++.+ ++. ++.|..+. +.++++.||+
T Consensus 21 ~~-~~lv~f~a~~C~~C~~~-~~~~~~~~~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~v 73 (122)
T 3aps_A 21 KT-HWVVDFYAPWCGPCQNF-APEFELLARMIKG-KVR-AGKVDCQA-----------------------YPQTCQKAGI 73 (122)
T ss_dssp SS-CEEEEEECTTCHHHHHH-HHHHHHHHHHHTT-TCE-EEEEETTT-----------------------CHHHHHHTTC
T ss_pred CC-eEEEEEECCCCHHHHHH-HHHHHHHHHHhcC-CeE-EEEEeCcC-----------------------CHHHHHHcCC
Confidence 44 67788999999999999 8999999998875 577 88887764 2356777877
Q ss_pred ccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 155 GKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
.. .|+.++++ +|+ +....+
T Consensus 74 ~~-----------~Pt~~~~~~~~~-~~~~~g 93 (122)
T 3aps_A 74 KA-----------YPSVKLYQYERA-KKSIWE 93 (122)
T ss_dssp CS-----------SSEEEEEEEEGG-GTEEEE
T ss_pred Cc-----------cceEEEEeCCCc-cceeec
Confidence 42 47777887 555 334444
No 181
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.11 E-value=2.5e-09 Score=75.10 Aligned_cols=75 Identities=13% Similarity=0.228 Sum_probs=52.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
.++ .+++.|+++|||.|... .+.++++.+++.+ ++. ++.|+.|. +.++++.||
T Consensus 18 ~~~-~~~v~f~~~~C~~C~~~-~~~~~~~~~~~~~-~~~-~~~v~~~~-----------------------~~~~~~~~~ 70 (106)
T 2yj7_A 18 SDK-PVLVDFWAPWCGPCRMI-APIIEELAKEYEG-KVK-VVKVNVDE-----------------------NPNTAAQYG 70 (106)
Confidence 344 57778899999999998 8999998888864 366 66665532 234566677
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.. .|+.+++.+|+++..+.+.
T Consensus 71 v~~-----------~Pt~~~~~~g~~~~~~~g~ 92 (106)
T 2yj7_A 71 IRS-----------IPTLLLFKNGQVVDRLVGA 92 (106)
Confidence 643 3555666788888776653
No 182
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.66 E-value=8.4e-08 Score=77.12 Aligned_cols=76 Identities=9% Similarity=-0.112 Sum_probs=56.1
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc---CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHH
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK---GIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKS 151 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~---gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~ 151 (203)
+++++++.||++|||+|... .|.+++++++++++ ++. ++.|..+ .+.++++.
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~-~p~~~~l~~~~~~~~~~~v~-~~~vd~~-----------------------~~~~l~~~ 187 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLA-VRMAHKFAIENTKAGKGKIL-GDMVEAI-----------------------EYPEWADQ 187 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHH-HHHHHHHHHHHHHTTCCCEE-EEEEEGG-----------------------GCHHHHHH
T ss_pred CCCcEEEEEeCCCCCccHHH-HHHHHHHHHhcccccCCcEE-EEEEEcc-----------------------cCHHHHHh
Confidence 34566889999999999999 89999999999853 455 6666553 23457788
Q ss_pred cCCccccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 152 LDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 152 yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
||+.. .|+.+++.+|+++..+.+.
T Consensus 188 ~~v~~-----------~Pt~~~~~~G~~~~~~~G~ 211 (226)
T 1a8l_A 188 YNVMA-----------VPKIVIQVNGEDRVEFEGA 211 (226)
T ss_dssp TTCCS-----------SCEEEEEETTEEEEEEESC
T ss_pred CCCcc-----------cCeEEEEeCCceeEEEcCC
Confidence 88853 4654545599988877654
No 183
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.63 E-value=1.3e-08 Score=75.22 Aligned_cols=42 Identities=19% Similarity=0.353 Sum_probs=33.0
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc-CCcEEEEEec
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK-GIDSVICVAV 119 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~-gv~~vi~IS~ 119 (203)
++ .+|+.||++|||+|... .|.|.+++++++.. ++. ++.|..
T Consensus 25 ~~-~vlv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~~-~~~vd~ 67 (133)
T 2dj3_A 25 KK-DVLIEFYAPWCGHCKQL-EPIYTSLGKKYKGQKDLV-IAKMDA 67 (133)
T ss_dssp TS-EEEEEECCTTCSHHHHH-HHHHHHHHHHHTTSSSEE-EEEECT
T ss_pred CC-cEEEEEECCCChhHHHH-HHHHHHHHHHhcCCCCEE-EEEecC
Confidence 55 67888999999999999 89999999999753 344 544544
No 184
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.61 E-value=5.7e-08 Score=65.90 Aligned_cols=39 Identities=15% Similarity=0.154 Sum_probs=32.6
Q ss_pred EEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 79 VIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 79 VL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
.|+.||++|||+|... .|.|+++++++.+ ++. ++.|..|
T Consensus 4 ~vv~f~~~~C~~C~~~-~~~l~~~~~~~~~-~~~-~~~vd~~ 42 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMA-IEVVDEAKKEFGD-KID-VEKIDIM 42 (85)
T ss_dssp CEEEESCSSSCCSTTH-HHHHHHHHHHHCS-SCC-EEEECTT
T ss_pred EEEEEECCCCcchHHH-HHHHHHHHHHhcC-CeE-EEEEECC
Confidence 4678999999999999 8999999888864 577 8888764
No 185
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.59 E-value=4.4e-08 Score=75.00 Aligned_cols=74 Identities=12% Similarity=0.107 Sum_probs=56.8
Q ss_pred EEEEEeeCCCC--CCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 78 VVIFGLPGAYT--GVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 78 vVL~~f~~~~c--p~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
.||++||++|| ++|..- .|-|.++.++|..+ +. ++-|.+ |.+.+++.+||+.
T Consensus 35 ~vlVdF~A~wCr~gpCk~i-aPvleela~e~~~~-v~-~~KVdv-----------------------De~~~la~~ygV~ 88 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADL-AVVLPELINAFPGR-LV-AAEVAA-----------------------EAERGLMARFGVA 88 (137)
T ss_dssp EEEEEECCCTTTCTTHHHH-HHHHHHHHHTSTTT-EE-EEEECG-----------------------GGHHHHHHHHTCC
T ss_pred cEEEEEeCCccCCCchhhH-HhHHHHHHHHccCC-cE-EEEEEC-----------------------CCCHHHHHHcCCc
Confidence 68889999999 999998 89999999888643 44 555544 4455677888875
Q ss_pred cccccccCCCCcceEEEEEeCCEEEEEEeecCC
Q 028808 156 KDLSAALLGPRSERWSAYVEDGRIKALNVEEAP 188 (203)
Q Consensus 156 ~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~ 188 (203)
++|+.++..||+++...++..+
T Consensus 89 -----------siPTlilFkdG~~v~~~vG~~~ 110 (137)
T 2qsi_A 89 -----------VCPSLAVVQPERTLGVIAKIQD 110 (137)
T ss_dssp -----------SSSEEEEEECCEEEEEEESCCC
T ss_pred -----------cCCEEEEEECCEEEEEEeCCCC
Confidence 3576666689999999988643
No 186
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.59 E-value=2.6e-08 Score=84.94 Aligned_cols=72 Identities=8% Similarity=0.171 Sum_probs=53.6
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++ +||+.||++||++|... +|.|.++++++++. +. ++.|.+|. +.+.++++.||+
T Consensus 35 ~~-~vlV~F~A~wC~~C~~~-~p~~~~la~~~~~~-~~-~~~v~~d~---------------------~~~~~l~~~~~I 89 (298)
T 3ed3_A 35 NY-TSLVEFYAPWCGHCKKL-SSTFRKAAKRLDGV-VQ-VAAVNCDL---------------------NKNKALCAKYDV 89 (298)
T ss_dssp SS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTTT-SE-EEEEETTS---------------------TTTHHHHHHTTC
T ss_pred CC-eEEEEEECCCCHHHHHH-HHHHHHHHHHccCC-cE-EEEEEccC---------------------ccCHHHHHhCCC
Confidence 44 67889999999999999 99999999998754 76 88898873 225667888887
Q ss_pred ccccccccCCCCcceEEEEEeCCEEEEE
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRIKAL 182 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I~~~ 182 (203)
.. .|+.+++++|+++..
T Consensus 90 ~~-----------~Pt~~~~~~g~~v~~ 106 (298)
T 3ed3_A 90 NG-----------FPTLMVFRPPKIDLS 106 (298)
T ss_dssp CB-----------SSEEEEEECCCC---
T ss_pred Cc-----------cceEEEEECCceeec
Confidence 53 466777777765443
No 187
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.56 E-value=7e-09 Score=76.11 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=52.5
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ .+|+.||++|||.|... .|.|+++.++++ ++. ++.|+.|. +.++++.||
T Consensus 35 ~~~-~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~--~v~-~~~v~~~~-----------------------~~~~~~~~~ 86 (130)
T 1wmj_A 35 AGK-VVIIDFTASWCGPCRFI-APVFAEYAKKFP--GAV-FLKVDVDE-----------------------LKEVAEKYN 86 (130)
T ss_dssp TTC-BCBEECCSSSCSCSSSS-HHHHHHHHHHCT--TBC-CEECCTTT-----------------------SGGGHHHHT
T ss_pred cCC-EEEEEEECCCChhHHHH-HHHHHHHHHHCC--CCE-EEEEeccc-----------------------hHHHHHHcC
Confidence 466 56778999999999999 899999888875 577 77776642 346777888
Q ss_pred CccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+.. .|+ +++. +|+++....+
T Consensus 87 v~~-----------~Pt-~~~~~~g~~~~~~~g 107 (130)
T 1wmj_A 87 VEA-----------MPT-FLFIKDGAEADKVVG 107 (130)
T ss_dssp CCS-----------SCC-CCBCTTTTCCBCCCT
T ss_pred CCc-----------cce-EEEEeCCeEEEEEeC
Confidence 753 343 4554 8888766554
No 188
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.55 E-value=1.3e-07 Score=64.06 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=32.9
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
++|+.||++|||+|... .|.|+++++++.+ ++. ++.|..+
T Consensus 4 ~~vv~f~~~~C~~C~~~-~~~l~~~~~~~~~-~~~-~~~vd~~ 43 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAA-KRVVEEVANEMPD-AVE-VEYINVM 43 (85)
T ss_dssp EEEEEEECCCSSCCCTH-HHHHHHHHHHCSS-SEE-EEEEESS
T ss_pred eEEEEEeCCCCCchHHH-HHHHHHHHHHcCC-ceE-EEEEECC
Confidence 56788999999999999 8999998887753 466 7778775
No 189
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.51 E-value=1.2e-07 Score=74.30 Aligned_cols=71 Identities=11% Similarity=0.128 Sum_probs=52.5
Q ss_pred CeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 76 KKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 76 k~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
.++||+.||++||++|..- -|-|.++.++++++ +. ++-|.+|. ..+++..||+.
T Consensus 41 ~k~VVVdF~A~WCgPCk~m-~PvleelA~e~~~~-v~-f~kVDVDe-----------------------~~e~a~~y~V~ 94 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKM-DELLYKVADDIKNF-CV-IYLVDITE-----------------------VPDFNTMYELY 94 (160)
T ss_dssp SSEEEEEEECTTSHHHHHH-HHHHHHHHHHHTTT-EE-EEEEETTT-----------------------CCTTTTTTTCC
T ss_pred CCEEEEEEECCCChhHHHH-HHHHHHHHHHccCC-cE-EEEEECCC-----------------------CHHHHHHcCCC
Confidence 3478899999999999998 89999999998643 44 66665543 34577788885
Q ss_pred cccccccCCCCcceEEEEEeCCEEEEEE
Q 028808 156 KDLSAALLGPRSERWSAYVEDGRIKALN 183 (203)
Q Consensus 156 ~~~~~~g~~~~~~r~tfIIddG~I~~~~ 183 (203)
. .|+.++..+|+.+.+.
T Consensus 95 s-----------iPT~~fFk~G~~v~vd 111 (160)
T 2av4_A 95 D-----------PVSVMFFYRNKHMMID 111 (160)
T ss_dssp S-----------SEEEEEEETTEEEEEE
T ss_pred C-----------CCEEEEEECCEEEEEe
Confidence 3 4655456699887644
No 190
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.50 E-value=7.6e-08 Score=73.92 Aligned_cols=74 Identities=8% Similarity=-0.053 Sum_probs=55.4
Q ss_pred EEEEEeeCCC--CCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 78 VVIFGLPGAY--TGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 78 vVL~~f~~~~--cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
.||++||++| |++|..- .|-|.++.++|.++.+. ++-|.+ |.+.+++.+|||.
T Consensus 36 ~vlVdF~a~~crCgpCk~i-aPvleela~e~~g~~v~-~~KVdv-----------------------De~~~lA~~ygV~ 90 (140)
T 2qgv_A 36 DGVVLLSSDPKRTPEVSDN-PVMIGELLHEFPDYTWQ-VAIADL-----------------------EQSEAIGDRFGAF 90 (140)
T ss_dssp SEEEEECCCTTTCTTTTHH-HHHHHHHHTTCTTSCCE-EEECCH-----------------------HHHHHHHHHHTCC
T ss_pred CEEEEEeCCcccCCcHHHH-HhHHHHHHHHcCCCeEE-EEEEEC-----------------------CCCHHHHHHcCCc
Confidence 3566999999 9999998 89999999888653355 665544 3345677788774
Q ss_pred cccccccCCCCcceEEEEEeCCEEEEEEeecC
Q 028808 156 KDLSAALLGPRSERWSAYVEDGRIKALNVEEA 187 (203)
Q Consensus 156 ~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~ 187 (203)
++|+.++..||+++...+|..
T Consensus 91 -----------sIPTlilFk~G~~v~~~~G~~ 111 (140)
T 2qgv_A 91 -----------RFPATLVFTGGNYRGVLNGIH 111 (140)
T ss_dssp -----------SSSEEEEEETTEEEEEEESCC
T ss_pred -----------cCCEEEEEECCEEEEEEecCC
Confidence 357666667999999998754
No 191
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.49 E-value=5.4e-08 Score=78.13 Aligned_cols=74 Identities=9% Similarity=0.120 Sum_probs=54.9
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLD 153 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yG 153 (203)
+|+ ++|+.||++||++|... .|.+.++++++++ .+. ++.|..+. +.++++.||
T Consensus 113 ~~~-~vlv~F~a~wC~~C~~~-~p~~~~l~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 165 (210)
T 3apq_A 113 SGE-LWFVNFYSPGCSHCHDL-APTWREFAKEVDG-LLR-IGAVNCGD-----------------------DRMLCRMKG 165 (210)
T ss_dssp HSC-CEEEEEECTTCHHHHHH-HHHHHHHHHHTBT-TBE-EEEEETTT-----------------------CHHHHHHTT
T ss_pred cCC-cEEEEEeCCCChhHHHH-HHHHHHHHHHhcC-ceE-EEEEECCc-----------------------cHHHHHHcC
Confidence 566 67788999999999999 8999999988864 366 77776543 235777787
Q ss_pred CccccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 154 LGKDLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 154 v~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
+.. .|+.+++.+|+++....+
T Consensus 166 v~~-----------~Pt~~~~~~G~~~~~~~G 186 (210)
T 3apq_A 166 VNS-----------YPSLFIFRSGMAAVKYNG 186 (210)
T ss_dssp CCS-----------SSEEEEECTTSCCEECCS
T ss_pred CCc-----------CCeEEEEECCCceeEecC
Confidence 753 465666668988776654
No 192
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.48 E-value=7.2e-08 Score=80.45 Aligned_cols=88 Identities=5% Similarity=-0.021 Sum_probs=60.4
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
|+ +||+.||++||++|... .|.|.+++.+|. ++. ++.|..+. .. +++.|++
T Consensus 133 ~k-~VvV~Fya~wC~~Ck~l-~p~l~~La~~~~--~v~-f~kVd~d~----------~~--------------l~~~~~I 183 (245)
T 1a0r_P 133 IT-TIVVHIYEDGIKGCDAL-NSSLICLAAEYP--MVK-FCKIKASN----------TG--------------AGDRFSS 183 (245)
T ss_dssp TC-EEEEEEECTTSTTHHHH-HHHHHHHHHHCT--TSE-EEEEEHHH----------HC--------------CTTSSCT
T ss_pred CC-EEEEEEECCCChHHHHH-HHHHHHHHHHCC--CCE-EEEEeCCc----------HH--------------HHHHCCC
Confidence 55 67889999999999999 899999999885 477 88886632 11 2335666
Q ss_pred ccccccccCCCCcceEEEEEeCCEEEEEEeecCC--C-CcccCCHHHHHhc
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRIKALNVEEAP--S-KMKVSGGDVILGQ 202 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~--~-~~~~~~a~~vL~~ 202 (203)
. ..|+.+++.+|+++...++... + .++..+.+.+|+.
T Consensus 184 ~-----------~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 184 D-----------VLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp T-----------TCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred C-----------CCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 3 3476666669999999887632 1 1233345555543
No 193
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.47 E-value=8.5e-07 Score=71.52 Aligned_cols=70 Identities=14% Similarity=0.321 Sum_probs=53.1
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHc
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG--IDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSL 152 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g--v~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~y 152 (203)
++ ++++.||++||++|... .|.+.++++++++++ +. ++.|..+. +.+++++|
T Consensus 147 ~~-~~~v~f~a~wC~~C~~~-~p~~~~~a~~~~~~~~~v~-~~~vd~~~-----------------------~~~l~~~~ 200 (241)
T 3idv_A 147 AD-IILVEFYAPWCGHCKKL-APEYEKAAKELSKRSPPIP-LAKVDATA-----------------------ETDLAKRF 200 (241)
T ss_dssp CS-EEEEEEECTTCTGGGGT-HHHHHHHHHHHHTSSSCCC-EEEEETTT-----------------------CHHHHHHT
T ss_pred CC-eEEEEEECCCCHHHHHh-HHHHHHHHHHHhccCCcEE-EEEEECCC-----------------------CHHHHHHc
Confidence 44 67889999999999999 899999999998754 66 66665543 34577888
Q ss_pred CCccccccccCCCCcceEEEEEeCCEEEE
Q 028808 153 DLGKDLSAALLGPRSERWSAYVEDGRIKA 181 (203)
Q Consensus 153 Gv~~~~~~~g~~~~~~r~tfIIddG~I~~ 181 (203)
|+.. .|+.+++++|+++.
T Consensus 201 ~v~~-----------~Pt~~~~~~g~~~~ 218 (241)
T 3idv_A 201 DVSG-----------YPTLKIFRKGRPYD 218 (241)
T ss_dssp TCCS-----------SSEEEEEETTEEEE
T ss_pred CCcc-----------cCEEEEEECCeEEE
Confidence 8752 46666667888765
No 194
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.44 E-value=3e-08 Score=76.86 Aligned_cols=92 Identities=8% Similarity=-0.011 Sum_probs=57.3
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH-cCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHc
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA-KGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSL 152 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~-~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~y 152 (203)
.|| .||+.||++||++|... .|.+.+. +++.+ .+.. ++.|.+|+. . ...+..|
T Consensus 43 ~~K-pVlV~F~A~WC~~Ck~m-~p~~~~~-~~~~~~~~~~-fv~V~vD~e-----------~-----------~~~~~~~ 96 (151)
T 3ph9_A 43 SKK-PLMVIHHLEDCQYSQAL-KKVFAQN-EEIQEMAQNK-FIMLNLMHE-----------T-----------TDKNLSP 96 (151)
T ss_dssp HTC-CEEEEECCTTCHHHHHH-HHHHHHC-HHHHHHHHHT-CEEEEESSC-----------C-----------SCGGGCT
T ss_pred cCC-cEEEEEECCCCHhHHHH-HHHHhcC-HHHHHHhhcC-eEEEEecCC-----------c-----------hhhHhhc
Confidence 566 57778999999999987 6777764 22221 1124 556666521 0 0123344
Q ss_pred CCccccccccCCCCcceEEEEEe-CCEEEEEEeecCCCC---cccCCHHHHHhc
Q 028808 153 DLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEEAPSK---MKVSGGDVILGQ 202 (203)
Q Consensus 153 Gv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~~~~~---~~~~~a~~vL~~ 202 (203)
++. ..|+++++| +|++++..+|..... +...+.+++|+.
T Consensus 97 ~v~-----------~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 97 DGQ-----------YVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp TCC-----------CSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHH
T ss_pred CCC-----------CCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHH
Confidence 442 358888999 999999888753221 345677777765
No 195
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.44 E-value=9.2e-08 Score=71.80 Aligned_cols=69 Identities=13% Similarity=0.036 Sum_probs=51.4
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccc
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKD 157 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~ 157 (203)
.||+.||++||++|... .|.|.++++++. ++. ++.|..+... +.|++.
T Consensus 32 ~vvv~f~a~wC~~C~~~-~p~l~~la~~~~--~v~-~~~vd~~~~~--------------------------~~~~i~-- 79 (135)
T 2dbc_A 32 WVVIHLYRSSVPMCLVV-NQHLSVLARKFP--ETK-FVKAIVNSCI--------------------------EHYHDN-- 79 (135)
T ss_dssp EEEEEECCTTCHHHHHH-HHHHHHHHHHCS--SEE-EEEECCSSSC--------------------------SSCCSS--
T ss_pred EEEEEEECCCChHHHHH-HHHHHHHHHHCC--CcE-EEEEEhhcCc--------------------------ccCCCC--
Confidence 67889999999999999 899999888773 455 7777665420 345553
Q ss_pred cccccCCCCcceEEEEEeCCEEEEEEeecC
Q 028808 158 LSAALLGPRSERWSAYVEDGRIKALNVEEA 187 (203)
Q Consensus 158 ~~~~g~~~~~~r~tfIIddG~I~~~~~~~~ 187 (203)
..|+.+++++|+++...++..
T Consensus 80 ---------~~Pt~~~~~~G~~v~~~~G~~ 100 (135)
T 2dbc_A 80 ---------CLPTIFVYKNGQIEGKFIGII 100 (135)
T ss_dssp ---------CCSEEEEESSSSCSEEEESTT
T ss_pred ---------CCCEEEEEECCEEEEEEEeEE
Confidence 347666667999999888763
No 196
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.41 E-value=2.4e-07 Score=75.94 Aligned_cols=42 Identities=12% Similarity=0.247 Sum_probs=35.7
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHH--cCCcEEEEEecC
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA--KGIDSVICVAVN 120 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~--~gv~~vi~IS~d 120 (203)
+++|+.||++||++|... .|.+.++++++++ .++. ++.|+++
T Consensus 31 ~~vlv~F~a~wC~~C~~~-~p~~~~l~~~~~~~~~~v~-~~~vd~~ 74 (244)
T 3q6o_A 31 SAWAVEFFASWCGHCIAF-APTWXALAEDVKAWRPALY-LAALDCA 74 (244)
T ss_dssp SEEEEEEECTTCHHHHHH-HHHHHHHHHHTGGGTTTEE-EEEEETT
T ss_pred CeEEEEEECCcCHHHHHH-HHHHHHHHHHHHhccCcEE-EEEEeCC
Confidence 478889999999999999 9999999999986 3566 7778764
No 197
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.40 E-value=6.3e-07 Score=59.76 Aligned_cols=61 Identities=11% Similarity=0.099 Sum_probs=42.6
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccc
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLS 159 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~ 159 (203)
.+.||++|||+|... .|.++++.+++.. .+. ++.| | +.+++++||+..
T Consensus 3 ~v~f~a~wC~~C~~~-~~~l~~~~~~~~~-~~~-~~~v--~------------------------~~~~~~~~~v~~--- 50 (77)
T 1ilo_A 3 KIQIYGTGCANCQML-EKNAREAVKELGI-DAE-FEKI--K------------------------EMDQILEAGLTA--- 50 (77)
T ss_dssp EEEEECSSSSTTHHH-HHHHHHHHHHTTC-CEE-EEEE--C------------------------SHHHHHHHTCSS---
T ss_pred EEEEEcCCChhHHHH-HHHHHHHHHHcCC-ceE-EEEe--c------------------------CHHHHHHCCCCc---
Confidence 467899999999998 8999888877642 233 4443 2 346777888853
Q ss_pred cccCCCCcceEEEEEeCCEEEEE
Q 028808 160 AALLGPRSERWSAYVEDGRIKAL 182 (203)
Q Consensus 160 ~~g~~~~~~r~tfIIddG~I~~~ 182 (203)
.|+ +++ ||+++..
T Consensus 51 --------~Pt-~~~-~G~~~~~ 63 (77)
T 1ilo_A 51 --------LPG-LAV-DGELKIM 63 (77)
T ss_dssp --------SSC-EEE-TTEEEEC
T ss_pred --------CCE-EEE-CCEEEEc
Confidence 354 445 9998765
No 198
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.39 E-value=2.7e-07 Score=84.63 Aligned_cols=74 Identities=8% Similarity=0.193 Sum_probs=55.8
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHH--cCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA--KGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~--~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++||+.||++||++|... +|.|+++++++++ .++. ++.|..++ |.+.+++++||+
T Consensus 31 k~vlV~FyA~WC~pCk~~-~P~l~~la~~~~~~~~~v~-~~~VD~d~---------------------d~~~~l~~~~~V 87 (519)
T 3t58_A 31 SAWAVEFFASWCGHAIAF-APTWKELANDVKDWRPALN-LAVLDCAE---------------------ETNSAVCREFNI 87 (519)
T ss_dssp SEEEEEEECTTSHHHHHH-HHHHHHHHHHHGGGTTTEE-EEEEETTS---------------------GGGHHHHHHTTC
T ss_pred CeEEEEEECCCCHHHHHH-HHHHHHHHHHhhCcCCcEE-EEEEECCc---------------------cccHHHHHHcCC
Confidence 478889999999999999 9999999999986 3566 77887754 335678888887
Q ss_pred ccccccccCCCCcceEEEEEe----CCEEEEEEe
Q 028808 155 GKDLSAALLGPRSERWSAYVE----DGRIKALNV 184 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIId----dG~I~~~~~ 184 (203)
.. .|+.++++ +|+++....
T Consensus 88 ~~-----------~PTl~~f~~g~~~G~~~~~~~ 110 (519)
T 3t58_A 88 AG-----------FPTVRFFQAFTKNGSGATLPG 110 (519)
T ss_dssp CS-----------BSEEEEECTTCCSCCCEEECC
T ss_pred cc-----------cCEEEEEcCcccCCCceeEec
Confidence 53 46777776 455554443
No 199
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.36 E-value=2.5e-07 Score=68.06 Aligned_cols=72 Identities=18% Similarity=0.306 Sum_probs=54.0
Q ss_pred CCCeEEEEEeeCC-------CCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCc
Q 028808 74 KGKKVVIFGLPGA-------YTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDG 146 (203)
Q Consensus 74 ~gk~vVL~~f~~~-------~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~ 146 (203)
+|+ +|++.||++ |||+|... .|.|.++++++++ ++. ++.|..++.. .| .|.+.
T Consensus 23 ~~~-~v~v~F~a~~~~~~~~wC~~C~~~-~p~l~~~~~~~~~-~~~-~~~vd~~~~~---~~-------------~d~~~ 82 (123)
T 1wou_A 23 NGK-TIFAYFTGSKDAGGKSWCPDCVQA-EPVVREGLKHISE-GCV-FIYCQVGEKP---YW-------------KDPNN 82 (123)
T ss_dssp TTS-EEEEEEECCBCTTCCBSCHHHHHH-HHHHHHHGGGCCT-TEE-EEEEECCCHH---HH-------------HCTTC
T ss_pred CCC-EEEEEEEccCCCCCCCcCHHHHHh-hHHHHHHHHHcCC-CcE-EEEEECCCch---hh-------------hchhH
Confidence 466 677889999 99999999 8999998887754 576 8888887632 12 25677
Q ss_pred hHHHHcCCccccccccCCCCcceEEEEEeC
Q 028808 147 SFHKSLDLGKDLSAALLGPRSERWSAYVED 176 (203)
Q Consensus 147 ~v~~~yGv~~~~~~~g~~~~~~r~tfIIdd 176 (203)
.+++.|++.. .|+.+++++
T Consensus 83 ~~~~~~~i~~-----------~Pt~~~~~~ 101 (123)
T 1wou_A 83 DFRKNLKVTA-----------VPTLLKYGT 101 (123)
T ss_dssp HHHHHHCCCS-----------SSEEEETTS
T ss_pred HHHHHCCCCe-----------eCEEEEEcC
Confidence 8888998853 466666664
No 200
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.36 E-value=9.5e-07 Score=76.20 Aligned_cols=66 Identities=12% Similarity=0.116 Sum_probs=49.4
Q ss_pred eEEEEEeeCCCCCCCCccchhh-------HHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHH
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPS-------YKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFH 149 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~-------l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~ 149 (203)
.++|+.||++||+ |... +|. ++++++++++.++. ++.|.++. +.+++
T Consensus 29 ~~~lV~F~a~wC~-c~~~-~p~~~~~~~~~~~~a~~~~~~~v~-~~~Vd~~~-----------------------~~~l~ 82 (350)
T 1sji_A 29 DVLCLYYHESVSS-DKVA-QKQFQLKEIVLELVAQVLEHKDIG-FVMVDAKK-----------------------EAKLA 82 (350)
T ss_dssp SEEEEEEECCSCS-SSTT-SHHHHHHHHHHHHHHHHGGGSSEE-EEEEETTT-----------------------THHHH
T ss_pred CeEEEEEECCCCc-chhh-CchhhhhhHHHHHHHHHHhhcCcE-EEEEeCCC-----------------------CHHHH
Confidence 4788899999999 9877 899 78888888776776 77776653 34577
Q ss_pred HHcCCccccccccCCCCcceEEEEEeCCEE
Q 028808 150 KSLDLGKDLSAALLGPRSERWSAYVEDGRI 179 (203)
Q Consensus 150 ~~yGv~~~~~~~g~~~~~~r~tfIIddG~I 179 (203)
++||+.. .|+.+++.+|++
T Consensus 83 ~~~~v~~-----------~Pt~~~~~~g~~ 101 (350)
T 1sji_A 83 KKLGFDE-----------EGSLYVLKGDRT 101 (350)
T ss_dssp HHHTCCS-----------TTEEEEEETTEE
T ss_pred HhcCCCc-----------cceEEEEECCcE
Confidence 7787742 466667778874
No 201
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.35 E-value=1.6e-07 Score=71.76 Aligned_cols=71 Identities=11% Similarity=0.095 Sum_probs=42.8
Q ss_pred EEEEeeCCC--CCCCCccchhhHHHhHHHHHHcCCc-EEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 79 VIFGLPGAY--TGVCSNQHVPSYKNNIDKFKAKGID-SVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 79 VL~~f~~~~--cp~C~~ehl~~l~~~~~~f~~~gv~-~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+|++|+++| |++|... .|.|++++++| + ++. .++.|..| .+.+++++||+.
T Consensus 37 ~vv~f~~~~~~C~~C~~l-~P~l~~la~~~-~-~v~~~~~~Vd~d-----------------------~~~~la~~~~V~ 90 (142)
T 2es7_A 37 GVILLSSDPRRTPEVSDN-PVMIAELLREF-P-QFDWQVAVADLE-----------------------QSEAIGDRFNVR 90 (142)
T ss_dssp EEEEECCCSCC----CCH-HHHHHHHHHTC-T-TSCCEEEEECHH-----------------------HHHHHHHTTTCC
T ss_pred EEEEEECCCCCCccHHHH-HHHHHHHHHHh-c-ccceeEEEEECC-----------------------CCHHHHHhcCCC
Confidence 455677877 9999999 89999999888 3 232 04555443 234577888875
Q ss_pred cccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 156 KDLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 156 ~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.|+++++.+|+++....|.
T Consensus 91 -----------~iPT~~~fk~G~~v~~~~G~ 110 (142)
T 2es7_A 91 -----------RFPATLVFTDGKLRGALSGI 110 (142)
T ss_dssp -----------SSSEEEEESCC----CEESC
T ss_pred -----------cCCeEEEEeCCEEEEEEeCC
Confidence 35777778899999887764
No 202
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.30 E-value=2e-06 Score=70.91 Aligned_cols=68 Identities=15% Similarity=0.007 Sum_probs=49.3
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH---cCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA---KGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHK 150 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~---~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~ 150 (203)
+|+ ++++.||++|||+|... .|.+++++.++++ .++. +..|..+. +.++++
T Consensus 137 ~~~-~~vv~F~a~wC~~C~~~-~p~l~~la~~~~~~~~~~v~-~~~vd~~~-----------------------~~~~~~ 190 (243)
T 2hls_A 137 KGR-VHIETIITPSCPYCPYA-VLLAHMFAYEAWKQGNPVIL-SEAVEAYE-----------------------NPDIAD 190 (243)
T ss_dssp CSC-EEEEEEECSSCSSHHHH-HHHHHHHHHHHHHTTCCCEE-EEEEETTT-----------------------CHHHHH
T ss_pred CCC-cEEEEEECCCCCCcHHH-HHHHHHHHHHcccccCCcEE-EEEEECcc-----------------------CHHHHH
Confidence 555 77888999999999999 9999999998853 3555 66664432 345777
Q ss_pred HcCCccccccccCCCCcceEEEEEeCCEEE
Q 028808 151 SLDLGKDLSAALLGPRSERWSAYVEDGRIK 180 (203)
Q Consensus 151 ~yGv~~~~~~~g~~~~~~r~tfIIddG~I~ 180 (203)
+||+.. .|+++| ||+++
T Consensus 191 ~~~V~~-----------vPt~~i--~G~~~ 207 (243)
T 2hls_A 191 KYGVMS-----------VPSIAI--NGYLV 207 (243)
T ss_dssp HTTCCS-----------SSEEEE--TTEEE
T ss_pred HcCCee-----------eCeEEE--CCEEE
Confidence 888752 465555 88875
No 203
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.30 E-value=4.8e-07 Score=66.46 Aligned_cols=68 Identities=6% Similarity=-0.114 Sum_probs=48.6
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc----CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHH
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK----GIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHK 150 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~----gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~ 150 (203)
++ .+|+.||++||++|... .|.|+++++++... ++. ++.|..+ .+.++++
T Consensus 33 ~~-~vlv~F~a~wC~~C~~~-~p~~~~la~~~~~~~~~~~v~-~~~vd~~-----------------------~~~~l~~ 86 (127)
T 3h79_A 33 EK-DVFVLYYVPWSRHSVAA-MRLWDDLSMSQSQKRNHLTFV-AARIDGE-----------------------KYPDVIE 86 (127)
T ss_dssp TC-EEEEEEECTTCHHHHHH-HHHHHHHHHHHHTSTTTTTEE-EEEEETT-----------------------TCHHHHH
T ss_pred CC-CEEEEEECCccHHHHHH-hHHHHHHHHHHHhcccCCCeE-EEEEEcc-----------------------ccHhHHH
Confidence 45 78889999999999999 89999999988632 233 4445443 3456788
Q ss_pred HcCCccccccccCCCCcceEEEEEe-CCEE
Q 028808 151 SLDLGKDLSAALLGPRSERWSAYVE-DGRI 179 (203)
Q Consensus 151 ~yGv~~~~~~~g~~~~~~r~tfIId-dG~I 179 (203)
+|++.. .|+.++++ ++++
T Consensus 87 ~~~v~~-----------~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 87 RMRVSG-----------FPTMRYYTRIDKQ 105 (127)
T ss_dssp HTTCCS-----------SSEEEEECSSCSS
T ss_pred hcCCcc-----------CCEEEEEeCCCCC
Confidence 888753 47677777 4443
No 204
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.28 E-value=3.4e-07 Score=67.72 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=54.1
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcc
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGK 156 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~ 156 (203)
+.|+++|.++|||+|..- .|.|++++++ .++. ++-|-+|... |-..+++..|||..
T Consensus 25 ~~vvi~khatwCgpc~~~-~~~~e~~~~~---~~v~-~~~vdVde~r-------------------~~Sn~IA~~~~V~h 80 (112)
T 3iv4_A 25 KYVFVLKHSETCPISANA-YDQFNKFLYE---RDMD-GYYLIVQQER-------------------DLSDYIAKKTNVKH 80 (112)
T ss_dssp SEEEEEEECTTCHHHHHH-HHHHHHHHHH---HTCC-EEEEEGGGGH-------------------HHHHHHHHHHTCCC
T ss_pred CCEEEEEECCcCHhHHHH-HHHHHHHhcc---CCce-EEEEEeecCc-------------------hhhHHHHHHhCCcc
Confidence 368889999999999988 8999988763 3477 6666554311 11245788888863
Q ss_pred ccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 157 DLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 157 ~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
. .|+.+++.||++++.....
T Consensus 81 ~----------sPq~il~k~G~~v~~~SH~ 100 (112)
T 3iv4_A 81 E----------SPQAFYFVNGEMVWNRDHG 100 (112)
T ss_dssp C----------SSEEEEEETTEEEEEEEGG
T ss_pred C----------CCeEEEEECCEEEEEeecc
Confidence 1 3666777899999987654
No 205
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.23 E-value=4.4e-07 Score=74.10 Aligned_cols=87 Identities=6% Similarity=-0.004 Sum_probs=58.2
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
|+ .||+.||++||++|... .|.|.+++++|. ++. ++.|..++ ..+++.|++
T Consensus 120 ~k-~vvV~F~a~wC~~C~~l-~p~l~~la~~~~--~v~-f~~vd~~~------------------------~~l~~~~~i 170 (217)
T 2trc_P 120 VT-TIVVNIYEDGVRGCDAL-NSSLECLAAEYP--MVK-FCKIRASN------------------------TGAGDRFSS 170 (217)
T ss_dssp TC-EEEEEEECTTSTTHHHH-HHHHHHHHTTCT--TSE-EEEEEHHH------------------------HTCSTTSCG
T ss_pred Cc-EEEEEEECCCCccHHHH-HHHHHHHHHHCC--CeE-EEEEECCc------------------------HHHHHHCCC
Confidence 45 67788999999999998 899999888874 566 77776531 113345555
Q ss_pred ccccccccCCCCcceEEEEEeCCEEEEEEeecCC-C--CcccCCHHHHHh
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRIKALNVEEAP-S--KMKVSGGDVILG 201 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~-~--~~~~~~a~~vL~ 201 (203)
. ..|+.+++.+|+++...++... + .++.++.+++|+
T Consensus 171 ~-----------~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~ 209 (217)
T 2trc_P 171 D-----------VLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLN 209 (217)
T ss_dssp G-----------GCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHH
T ss_pred C-----------CCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHH
Confidence 3 3476666779999988877532 1 122244555554
No 206
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.23 E-value=8.1e-07 Score=70.36 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=57.4
Q ss_pred eeecccccCCCeEEEEEeeCCCCCCCCccchh-hH--HHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhCCCCceEEE
Q 028808 66 TTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVP-SY--KNNIDKFKAKGIDSVICVAVND-PYVMNGWAEKLQAKDVIEFY 141 (203)
Q Consensus 66 ~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~-~l--~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~~~l~~~fpll 141 (203)
.+..+. .+|| +||+.||++||++|..- .+ .| .+..+.+.+ ++. ++.|..+. +...+.|.+.
T Consensus 31 a~~~A~-~~~K-pVlvdF~A~WC~~Ck~m-~~~~f~~~~va~~l~~-~fv-~ikVD~de~~~l~~~y~~~---------- 95 (173)
T 3ira_A 31 AFEKAR-KENK-PVFLSIGYSTCHWCHMM-AHESFEDEEVAGLMNE-AFV-SIKVDREERPDIDNIYMTV---------- 95 (173)
T ss_dssp HHHHHH-HHTC-CEEEEEECTTCHHHHHH-HHHTTTCHHHHHHHHH-HCE-EEEEETTTCHHHHHHHHHH----------
T ss_pred HHHHHH-HhCC-CEEEecccchhHhhccc-cccccCCHHHHHHHHh-cCc-eeeeCCcccCcHHHHHHHH----------
Confidence 455554 3677 57788999999999874 33 12 233344433 354 66666553 2222222211
Q ss_pred eeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEee-cCCCCcccCCHHHHHhc
Q 028808 142 GDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVE-EAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 142 sD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~-~~~~~~~~~~a~~vL~~ 202 (203)
+...+|+. .+|++++++ +|++++.... +..+..+.++-.++|++
T Consensus 96 ------~q~~~gv~-----------g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~ 141 (173)
T 3ira_A 96 ------CQIILGRG-----------GWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPR 141 (173)
T ss_dssp ------HHHHHSCC-----------CSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHH
T ss_pred ------HHHHcCCC-----------CCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHH
Confidence 11113442 468899999 9999987321 11122344556666654
No 207
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.23 E-value=2.4e-06 Score=74.61 Aligned_cols=71 Identities=10% Similarity=0.133 Sum_probs=51.8
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc-----CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHH
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK-----GIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFH 149 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~-----gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~ 149 (203)
++ ++|+.||++||++|... .|.++++++++++. ++. ++.|.++ .+.+++
T Consensus 22 ~~-~vlV~F~a~wC~~C~~~-~p~~~~~a~~~~~~~~~~~~v~-~~~Vd~~-----------------------~~~~l~ 75 (382)
T 2r2j_A 22 AD-VALVNFYADWCRFSQML-HPIFEEASDVIKEEFPNENQVV-FARVDCD-----------------------QHSDIA 75 (382)
T ss_dssp CS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHTTCC---CCEE-EEEEETT-----------------------TCHHHH
T ss_pred CC-eEEEEEECCCCHHHHHH-HHHHHHHHHHHHhhcCCCCceE-EEEEECC-----------------------ccHHHH
Confidence 45 78889999999999999 89999999999642 254 6666543 345677
Q ss_pred HHcCCccccccccCCCCcceEEEEEeCCEEEEE
Q 028808 150 KSLDLGKDLSAALLGPRSERWSAYVEDGRIKAL 182 (203)
Q Consensus 150 ~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~ 182 (203)
+.||+.. .|+.+++.+|+++.+
T Consensus 76 ~~~~v~~-----------~Pt~~~f~~G~~~~~ 97 (382)
T 2r2j_A 76 QRYRISK-----------YPTLKLFRNGMMMKR 97 (382)
T ss_dssp HHTTCCE-----------ESEEEEEETTEEEEE
T ss_pred HhcCCCc-----------CCEEEEEeCCcEeee
Confidence 7887753 365555568887764
No 208
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.21 E-value=6.5e-07 Score=80.72 Aligned_cols=68 Identities=12% Similarity=0.255 Sum_probs=52.2
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
++ .+|+.||++||++|... .|.+.++++++++.++. ++.|..+. +..+++.||+
T Consensus 31 ~~-~~lv~F~a~wC~~C~~~-~p~~~~~a~~~~~~~v~-~~~vd~~~-----------------------~~~l~~~~~v 84 (504)
T 2b5e_A 31 HD-LVLAEFFAPWCGHCKNM-APEYVKAAETLVEKNIT-LAQIDCTE-----------------------NQDLCMEHNI 84 (504)
T ss_dssp CS-EEEEEEECTTCHHHHHH-HHHHHHHHHHTTTTTCE-EEEEETTT-----------------------CHHHHHHTTC
T ss_pred CC-eEEEEEECCCCHHHHHh-HHHHHHHHHHhccCCeE-EEEEECCC-----------------------CHHHHHhcCC
Confidence 44 78889999999999999 89999999999876787 88887543 3457777777
Q ss_pred ccccccccCCCCcceEEEEEeCCEE
Q 028808 155 GKDLSAALLGPRSERWSAYVEDGRI 179 (203)
Q Consensus 155 ~~~~~~~g~~~~~~r~tfIIddG~I 179 (203)
.. .|+.+++.+|++
T Consensus 85 ~~-----------~Pt~~~~~~g~~ 98 (504)
T 2b5e_A 85 PG-----------FPSLKIFKNSDV 98 (504)
T ss_dssp CS-----------SSEEEEEETTCT
T ss_pred Cc-----------CCEEEEEeCCcc
Confidence 42 366666677765
No 209
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.19 E-value=1.1e-06 Score=65.05 Aligned_cols=84 Identities=15% Similarity=0.050 Sum_probs=60.5
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccc
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKD 157 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~ 157 (203)
.||+.||++||++|..- .|.|+++.+++. ++. ++-|..|.. ++.|++.
T Consensus 25 ~vvv~F~a~wc~~C~~~-~p~l~~la~~~~--~v~-f~kvd~d~~--------------------------~~~~~v~-- 72 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLV-NQHLSLLARKFP--ETK-FVKAIVNSC--------------------------IQHYHDN-- 72 (118)
T ss_dssp EEEEEEECTTSHHHHHH-HHHHHHHHHHCT--TSE-EEEEEGGGT--------------------------STTCCGG--
T ss_pred eEEEEEeCCCChHHHHH-HHHHHHHHHHCC--CCE-EEEEEhHHh--------------------------HHHCCCC--
Confidence 67889999999999988 799999988875 476 777776541 1345553
Q ss_pred cccccCCCCcceEEEEEeCCEEEEEEeecCC---CCcccCCHHHHHhc
Q 028808 158 LSAALLGPRSERWSAYVEDGRIKALNVEEAP---SKMKVSGGDVILGQ 202 (203)
Q Consensus 158 ~~~~g~~~~~~r~tfIIddG~I~~~~~~~~~---~~~~~~~a~~vL~~ 202 (203)
+.|+.++..||+++...++... ..++.++.+..|++
T Consensus 73 ---------~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 73 ---------CLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp ---------GCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred ---------CCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 3465556679999999998742 13455566777654
No 210
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.16 E-value=1e-06 Score=63.68 Aligned_cols=44 Identities=16% Similarity=0.292 Sum_probs=35.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc----CCcEEEEEecC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK----GIDSVICVAVN 120 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~----gv~~vi~IS~d 120 (203)
+++ .+|+.||++||++|... .|.|+++++++++. ++. ++.|..+
T Consensus 24 ~~~-~vlv~f~a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~v~-~~~vd~~ 71 (121)
T 2djj_A 24 DTK-DVLIEFYAPWCGHCKAL-APKYEELGALYAKSEFKDRVV-IAKVDAT 71 (121)
T ss_dssp TTS-CEEEEEECSSCTTHHHH-HHHHHHHHHHHTTSSCTTSSE-EEEEETT
T ss_pred CCC-CEEEEEECCCCHhHHHh-hHHHHHHHHHHhhcccCCceE-EEEEECc
Confidence 455 67788999999999999 89999999999762 466 7777665
No 211
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.15 E-value=3.3e-06 Score=75.44 Aligned_cols=72 Identities=10% Similarity=0.142 Sum_probs=54.1
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcc
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGK 156 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~ 156 (203)
..+|+.||++||++|... .|.|.+++++++++ +. ++.|.++. +..++++||+..
T Consensus 22 ~~~lv~F~a~wC~~C~~~-~p~~~~~a~~~~~~-v~-~~~vd~~~-----------------------~~~l~~~~~v~~ 75 (481)
T 3f8u_A 22 GLMLVEFFAPWCGHAKRL-APEYEAAATRLKGI-VP-LAKVDCTA-----------------------NTNTCNKYGVSG 75 (481)
T ss_dssp SEEEEEEECTTCHHHHHH-HHHHHHHHHHTTTT-CC-EEEEETTT-----------------------CHHHHHHTTCCE
T ss_pred CeEEEEEECCCCHHHHHh-HHHHHHHHHHhcCc-eE-EEEEECCC-----------------------CHHHHHhcCCCC
Confidence 478889999999999998 89999999998765 77 88787654 345777787753
Q ss_pred ccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 157 DLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 157 ~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
.|+.+++.+|+++....|
T Consensus 76 -----------~Ptl~~~~~g~~~~~~~G 93 (481)
T 3f8u_A 76 -----------YPTLKIFRDGEEAGAYDG 93 (481)
T ss_dssp -----------ESEEEEEETTEEEEECCS
T ss_pred -----------CCEEEEEeCCceeeeecC
Confidence 465555568877655543
No 212
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.06 E-value=4.9e-06 Score=78.83 Aligned_cols=75 Identities=4% Similarity=0.010 Sum_probs=55.9
Q ss_pred cccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchH
Q 028808 69 IKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSF 148 (203)
Q Consensus 69 L~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v 148 (203)
+.++ +|+ .|++.||++||++|... +|.|+++++++++ .+. ++.|..++. ..+
T Consensus 450 ~~~~-~~~-~vlv~F~a~wC~~c~~~-~p~~~~~a~~~~~-~v~-~~~vd~~~~-----------------------~~~ 501 (780)
T 3apo_A 450 FPAS-DKE-PWLVDFFAPWSPPSRAL-LPELRKASTLLYG-QLK-VGTLDCTIH-----------------------EGL 501 (780)
T ss_dssp SCTT-CCS-CEEEEEECTTCHHHHHH-HHHHHHHHHHTTT-TCE-EEEEETTTC-----------------------HHH
T ss_pred HHHc-CCC-eEEEEEECCCCHHHHHH-hHHHHHHHHHhcC-CeE-EEEEeCCCC-----------------------HHH
Confidence 4453 666 57788999999999999 9999999999975 376 888876532 236
Q ss_pred HHHcCCccccccccCCCCcceEEEEEeCCEEEEEE
Q 028808 149 HKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALN 183 (203)
Q Consensus 149 ~~~yGv~~~~~~~g~~~~~~r~tfIIddG~I~~~~ 183 (203)
++.||+.. .|+++++++|++ +.+
T Consensus 502 ~~~~~v~~-----------~Pt~~~~~~g~~-~~~ 524 (780)
T 3apo_A 502 CNMYNIQA-----------YPTTVVFNQSSI-HEY 524 (780)
T ss_dssp HHHTTCCS-----------SSEEEEEETTEE-EEE
T ss_pred HHHcCCCc-----------CCeEEEEcCCce-eee
Confidence 77787742 467777888877 444
No 213
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.02 E-value=1.3e-07 Score=68.60 Aligned_cols=39 Identities=8% Similarity=0.049 Sum_probs=30.3
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHH
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKF 106 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f 106 (203)
+.++|++. .|| .+++.||++|||+|... .|.|.++++++
T Consensus 3 ~~~~la~~-~~k-~~vV~F~A~WC~~C~~~-~p~~~~~a~~~ 41 (106)
T 3kp8_A 3 LAVGLAAH-LRQ-IGGTMYGAYWCPHCQDQ-KELFGAAFDQV 41 (106)
T ss_dssp HHHHHHHH-HHH-HTCEEEECTTCHHHHHH-HHHHGGGGGGS
T ss_pred HhhHHHHh-cCC-CEEEEEECCCCHHHHHH-HHHHHHHHHhC
Confidence 45778884 676 45668999999999998 89888876443
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.02 E-value=1.4e-06 Score=78.01 Aligned_cols=42 Identities=24% Similarity=0.394 Sum_probs=33.6
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc-CCcEEEEEec
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK-GIDSVICVAV 119 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~-gv~~vi~IS~ 119 (203)
|| .||+.||++||++|... +|.+.++++++++. ++. ++.|..
T Consensus 370 ~k-~vlv~f~a~wC~~C~~~-~p~~~~l~~~~~~~~~v~-~~~id~ 412 (481)
T 3f8u_A 370 NK-DVLIEFYAPWCGHCKNL-EPKYKELGEKLSKDPNIV-IAKMDA 412 (481)
T ss_dssp TC-EEEEEEECTTBHHHHHH-HHHHHHHHHHTTTCSSEE-EEEEET
T ss_pred CC-cEEEEEecCcChhHHHh-hHHHHHHHHHhccCCCEE-EEEEEC
Confidence 55 68889999999999999 99999999999765 444 444544
No 215
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.97 E-value=1.8e-06 Score=81.91 Aligned_cols=72 Identities=11% Similarity=0.023 Sum_probs=53.7
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcc
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGK 156 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~ 156 (203)
++||+.||++||++|... +|.+++++++++. ++. ++.|..+. +..+++.||+..
T Consensus 676 ~~v~v~F~a~wC~~C~~~-~p~~~~la~~~~~-~~~-~~~vd~~~-----------------------~~~~~~~~~v~~ 729 (780)
T 3apo_A 676 THWVVDFYAPWSGPSQNF-APEFELLARMIKG-KVR-AGKVDCQA-----------------------YPQTCQKAGIKA 729 (780)
T ss_dssp SCEEEEEECTTCHHHHHH-HHHHHHHHHHHTT-TCE-EEEEETTT-----------------------CHHHHHHTTCCS
T ss_pred CeEEEEEECCCCHHHHHH-HHHHHHHHHHhcC-Cce-EEEEECCC-----------------------CHHHHHhcCCCc
Confidence 467788999999999999 9999999999875 476 77776643 235677777742
Q ss_pred ccccccCCCCcceEEEEEeCCEEEEEEee
Q 028808 157 DLSAALLGPRSERWSAYVEDGRIKALNVE 185 (203)
Q Consensus 157 ~~~~~g~~~~~~r~tfIIddG~I~~~~~~ 185 (203)
.|+.+++.+|+++....+
T Consensus 730 -----------~Pt~~~~~~g~~~~~~~G 747 (780)
T 3apo_A 730 -----------YPSVKLYQYERAKKSIWE 747 (780)
T ss_dssp -----------SSEEEEEEEETTTTEEEE
T ss_pred -----------CCEEEEEcCCCccccccC
Confidence 466667777777665555
No 216
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.79 E-value=7e-06 Score=66.36 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=29.4
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~ 119 (203)
+|+ ++|+.||..|||+|... .+.+.++.+ .+++ |+.+..
T Consensus 85 ~~k-~~vv~F~d~~Cp~C~~~-~~~l~~l~~----~~v~-v~~~~~ 123 (216)
T 1eej_A 85 QEK-HVITVFTDITCGYCHKL-HEQMADYNA----LGIT-VRYLAF 123 (216)
T ss_dssp TCC-EEEEEEECTTCHHHHHH-HTTHHHHHH----TTEE-EEEEEC
T ss_pred CCC-EEEEEEECCCCHHHHHH-HHHHHHHHh----CCcE-EEEEEC
Confidence 454 67888999999999998 688877543 4677 776643
No 217
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.75 E-value=8.5e-06 Score=62.94 Aligned_cols=40 Identities=10% Similarity=0.151 Sum_probs=31.3
Q ss_pred eeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH
Q 028808 66 TTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 66 ~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
.+.+.+ -.++ ++|+.|+..|||+|... .+.+.++.+++.+
T Consensus 14 ~~~~G~-~~a~-v~i~~f~d~~Cp~C~~~-~~~l~~l~~~~~~ 53 (175)
T 3gyk_A 14 APVLGN-PEGD-VTVVEFFDYNCPYCRRA-MAEVQGLVDADPN 53 (175)
T ss_dssp SCEEEC-TTCS-EEEEEEECTTCHHHHHH-HHHHHHHHHHCTT
T ss_pred CCCcCC-CCCC-EEEEEEECCCCccHHHH-HHHHHHHHHhCCC
Confidence 456666 3565 78889999999999998 7999888777543
No 218
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.70 E-value=1.6e-05 Score=59.02 Aligned_cols=75 Identities=5% Similarity=-0.052 Sum_probs=41.8
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHH-HHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcc
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKF-KAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGK 156 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f-~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~ 156 (203)
.+|+.||++||++|..- -+.+...+++- +.+.+. ++-|.+++. ....++..|++.
T Consensus 20 ~~LV~F~A~wC~~Ck~~-~~~i~~~~~~~a~~~~~~-l~~vdv~~~---------------------~~~~la~~~~V~- 75 (116)
T 3dml_A 20 LRLLMFEQPGCLYCARW-DAEIAPQYPLTDEGRAAP-VQRLQMRDP---------------------LPPGLELARPVT- 75 (116)
T ss_dssp EEEEEEECTTCHHHHHH-HHHTTTTGGGSHHHHHSC-EEEEETTSC---------------------CCTTCBCSSCCC-
T ss_pred CEEEEEECCCCHHHHHH-HHHHHhhHHHhhhcccce-EEEEECCCC---------------------CchhHHHHCCCC-
Confidence 57788999999999753 22222221110 011234 555544431 112345556654
Q ss_pred ccccccCCCCcceEEEEEeCCEEEEEEeec
Q 028808 157 DLSAALLGPRSERWSAYVEDGRIKALNVEE 186 (203)
Q Consensus 157 ~~~~~g~~~~~~r~tfIIddG~I~~~~~~~ 186 (203)
+.|+.++++||+.+.+.++-
T Consensus 76 ----------g~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 76 ----------FTPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp ----------SSSEEEEEETTEEEEEEECC
T ss_pred ----------CCCEEEEEECCEEEeeecCC
Confidence 34666666899999987653
No 219
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.68 E-value=1.3e-05 Score=72.61 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=34.9
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHc-C------CcEEEEEecCC
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK-G------IDSVICVAVND 121 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~-g------v~~vi~IS~d~ 121 (203)
+||+.||++||++|... .|.|.++++++++. | +. ++.|..|.
T Consensus 44 ~VlV~FyA~WC~pCk~~-~P~l~~la~~~~~~~g~~~~~~v~-f~~VD~d~ 92 (470)
T 3qcp_A 44 PWIVLFYNDGCGACRRY-ASTFSKFAGGLKVEHGKDALQIAT-AAAVNCAS 92 (470)
T ss_dssp CEEEEEECTTCHHHHHH-HHHHHHHHHTSCCSSCSSGGGGCE-EEEEETTT
T ss_pred eEEEEEECCCCHHHHHH-HHHHHHHHHHHhhhcccccCceEE-EEEEECCC
Confidence 67889999999999999 99999999988743 2 66 77777654
No 220
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.67 E-value=2.8e-05 Score=62.42 Aligned_cols=42 Identities=10% Similarity=0.014 Sum_probs=32.6
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
+++++|+.||++|||+|... .|.+++++.++. ++. ++.|..+
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~-~~~~~~~~~~~~--~v~-~~~vd~~ 176 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSA-AVMAWDFALAND--YIT-SKVIDAS 176 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHH-HHHHHHHHHHCT--TEE-EEEEEGG
T ss_pred CCCeEEEEEECCCCcchHHH-HHHHHHHHHHCC--CeE-EEEEECC
Confidence 34576888999999999999 899999888772 455 6666543
No 221
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.51 E-value=7e-05 Score=58.68 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=31.0
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~ 119 (203)
++ ++|+.|+..|||+|... .+.+.++.+++.. .+. +..+..
T Consensus 22 ~~-~~i~~f~d~~Cp~C~~~-~~~l~~l~~~~~~-~v~-~~~~p~ 62 (195)
T 2znm_A 22 GK-IEVLEFFGYFCVHCHHF-DPLLLKLGKALPS-DAY-LRTEHV 62 (195)
T ss_dssp SS-EEEEEEECTTSCCTTSS-CHHHHHHHHHSCT-TEE-EEEEEC
T ss_pred CC-cEEEEEECCCChhHHHH-hHHHHHHHHHCCC-ceE-EEEecc
Confidence 44 77788999999999999 6999988877753 354 555543
No 222
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.45 E-value=4.6e-05 Score=59.91 Aligned_cols=43 Identities=12% Similarity=0.152 Sum_probs=32.7
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
.++ ++|+.|+..|||+|... .+.+.++.+++.+ ++. +.-+..+
T Consensus 24 ~~~-~~vv~f~d~~Cp~C~~~-~~~l~~l~~~~~~-~v~-~~~~~~~ 66 (195)
T 3hd5_A 24 PGK-IEVLEFFAYTCPHCAAI-EPMVEDWAKTAPQ-DVV-LKQVPIA 66 (195)
T ss_dssp TTC-EEEEEEECTTCHHHHHH-HHHHHHHHHTCCT-TEE-EEEEECC
T ss_pred CCC-eEEEEEECCCCccHHHh-hHHHHHHHHHCCC-CeE-EEEEecc
Confidence 355 77888999999999998 6888888777654 455 6666654
No 223
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.43 E-value=2.5e-05 Score=67.05 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=29.7
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHc
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAK 109 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~ 109 (203)
.++ .+++.||++||++|... .|.+.+++++|++.
T Consensus 266 ~~k-~~lv~f~a~wC~~C~~~-~p~~~~la~~~~~~ 299 (361)
T 3uem_A 266 EKK-NVFVEFYAPWCGHCKQL-APIWDKLGETYKDH 299 (361)
T ss_dssp TTC-EEEEEEECTTCHHHHHH-HHHHHHHHHHTTTC
T ss_pred CCC-cEEEEEecCcCHhHHHH-HHHHHHHHHHhccC
Confidence 345 77889999999999999 89999999999865
No 224
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.38 E-value=2.4e-05 Score=56.18 Aligned_cols=29 Identities=14% Similarity=0.344 Sum_probs=20.8
Q ss_pred cccCCCeEEEEEeeCCCCCCCCccchhhHHHh
Q 028808 71 DIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNN 102 (203)
Q Consensus 71 dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~ 102 (203)
++.++++ |++ ||++|||+|... .+.|.++
T Consensus 15 ~~~~~~~-vv~-f~a~~C~~C~~~-~~~l~~~ 43 (116)
T 2e7p_A 15 ELASSAP-VVV-FSKTYCGYCNRV-KQLLTQV 43 (116)
T ss_dssp HHHTSSS-EEE-EECTTCHHHHHH-HHHHHHH
T ss_pred HHHcCCC-EEE-EECCCChhHHHH-HHHHHHc
Confidence 3345664 444 999999999987 7766654
No 225
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.33 E-value=6.6e-05 Score=67.50 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=28.7
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
.+| .||+.||++||++|... .|.+.+++++++.
T Consensus 375 ~~k-~vlv~F~a~wC~~C~~~-~p~~~~l~~~~~~ 407 (504)
T 2b5e_A 375 PKK-DVLVLYYAPWCGHCKRL-APTYQELADTYAN 407 (504)
T ss_dssp TTC-CEEEEEECTTCHHHHHH-HHHHHHHHHHHHH
T ss_pred CCC-CEEEEEECCCChhHHHH-hHHHHHHHHHhhc
Confidence 355 57788999999999999 8999999999973
No 226
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.19 E-value=0.0002 Score=56.77 Aligned_cols=54 Identities=15% Similarity=0.176 Sum_probs=37.0
Q ss_pred eEEEEEeeC-------CCCCCCCccchhhHHHhHHHHHHc----CCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 77 KVVIFGLPG-------AYTGVCSNQHVPSYKNNIDKFKAK----GIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 77 ~vVL~~f~~-------~~cp~C~~ehl~~l~~~~~~f~~~----gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
..||+.||+ .||++|..- .|.|++++++|+.. .+. +.-|.+|. ..+.++++++.
T Consensus 38 ~~vvV~F~A~~~~~~~~wCgpCk~l-~P~~e~lA~~~~~~~~~~~v~-f~kvD~d~---~~~la~~~~I~ 102 (178)
T 3ga4_A 38 YFNILYITMRGTNSNGMSCQLCHDF-EKTYHAVADVIRSQAPQSLNL-FFTVDVNE---VPQLVKDLKLQ 102 (178)
T ss_dssp CEEEEEEECCSBCTTSCBCHHHHHH-HHHHHHHHHHHHHHCTTCCEE-EEEEETTT---CHHHHHHTTCC
T ss_pred CcEEEEEeCCCCCCCCCCChhHHHH-HHHHHHHHHHhhhccCCCCEE-EEEEECcc---CHHHHHHcCCC
Confidence 367888999 499999988 89999999999732 233 44455544 23445555553
No 227
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.19 E-value=0.0003 Score=61.10 Aligned_cols=53 Identities=15% Similarity=0.045 Sum_probs=35.6
Q ss_pred eEEEEEeeCCCCCCCCccch------hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCC
Q 028808 77 KVVIFGLPGAYTGVCSNQHV------PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQA 134 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl------~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l 134 (203)
.+||+.|++.||++|... - |.++++.++++..++. +..|.++.. ...++++++
T Consensus 31 ~~vlV~FyApWC~~~~~~-~~l~~~~p~~e~~a~~~~~~~v~-~~~Vd~~~~---~~l~~~~~V 89 (367)
T 3us3_A 31 EVLALLYHEPPEDDKASQ-RQFEMEELILELAAQVLEDKGVG-FGLVDSEKD---AAVAKKLGL 89 (367)
T ss_dssp SEEEEEEECCCCSSHHHH-HHHHHHHHHHHHHHHHHTTTTEE-EEEEETTTT---HHHHHHHTC
T ss_pred CeEEEEEECCCchhHHHh-hhhccccHHHHHHHHHhhcCCce-EEEEeCccc---HHHHHHcCC
Confidence 478889999999988432 1 3677777777766676 777776542 334455544
No 228
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.15 E-value=0.00019 Score=56.22 Aligned_cols=41 Identities=17% Similarity=0.167 Sum_probs=29.6
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEe
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVA 118 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS 118 (203)
.++ ++|+.|+..|||+|... .+.+.++.+++.+ ++. +.-+.
T Consensus 24 ~~~-~~i~~f~d~~Cp~C~~~-~~~l~~l~~~~~~-~v~-~~~~p 64 (192)
T 3h93_A 24 PGK-IEVVELFWYGCPHCYAF-EPTIVPWSEKLPA-DVH-FVRLP 64 (192)
T ss_dssp TTS-EEEEEEECTTCHHHHHH-HHHHHHHHHTCCT-TEE-EEEEE
T ss_pred CCC-CEEEEEECCCChhHHHh-hHHHHHHHHhCCC-CeE-EEEEe
Confidence 344 78889999999999988 6888777766654 344 44343
No 229
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.99 E-value=0.00068 Score=45.31 Aligned_cols=46 Identities=11% Similarity=-0.001 Sum_probs=28.6
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCC
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQA 134 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l 134 (203)
++.|+++|||+|... .+.|. ++|++ +..+..+......++.++++.
T Consensus 3 v~~f~~~~C~~C~~~-~~~l~-------~~~i~-~~~vdi~~~~~~~~~~~~~g~ 48 (81)
T 1h75_A 3 ITIYTRNDCVQCHAT-KRAME-------NRGFD-FEMINVDRVPEAAEALRAQGF 48 (81)
T ss_dssp EEEEECTTCHHHHHH-HHHHH-------HTTCC-CEEEETTTCHHHHHHHHHTTC
T ss_pred EEEEcCCCChhHHHH-HHHHH-------HCCCC-eEEEECCCCHHHHHHHHHhCC
Confidence 345899999999865 44443 45787 778887743223333334444
No 230
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.95 E-value=0.00075 Score=53.65 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=38.3
Q ss_pred CeEEEEEeeCC-CCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 76 KKVVIFGLPGA-YTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 76 k~vVL~~f~~~-~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
++++|+.|++. ||++|..- .|.++++.+. . ..+. ++.|..++++ ..+.++++++.
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~-~~~~~~la~~-~-~~v~-~~~vd~~~~~-~~~~~~~~~v~ 77 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQL-KQLVQELSEL-T-DKLS-YEIVDFDTPE-GKELAKRYRID 77 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHH-HHHHHHHHTT-C-TTEE-EEEEETTSHH-HHHHHHHTTCC
T ss_pred CCeEEEEEecCCCCchhHHH-HHHHHHHHhh-C-CceE-EEEEeCCCcc-cHHHHHHcCCC
Confidence 35888889999 99999877 6877776543 2 2465 7777777632 24566777764
No 231
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=96.90 E-value=0.0033 Score=48.31 Aligned_cols=19 Identities=11% Similarity=0.254 Sum_probs=15.5
Q ss_pred CCCeEEEEEeeCCCCCCCCc
Q 028808 74 KGKKVVIFGLPGAYTGVCSN 93 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ 93 (203)
+|| .|++.|.++||+.|..
T Consensus 41 ~~K-~vlvd~~a~wC~~C~~ 59 (153)
T 2dlx_A 41 QNK-WLMINIQNVQDFACQC 59 (153)
T ss_dssp HTC-EEEEEEECSCTTTHHH
T ss_pred cCC-eEEEEEECCCCHhHHH
Confidence 466 5778899999999964
No 232
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.90 E-value=0.00024 Score=47.86 Aligned_cols=36 Identities=22% Similarity=0.115 Sum_probs=23.2
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
+..|+++|||+|... .+.++++.+ +.|++ +..+..|
T Consensus 4 ~~~f~~~~C~~C~~~-~~~l~~~~~---~~~~~-~~~~~v~ 39 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSA-EQAVANAID---PSKYT-VEIVHLG 39 (80)
T ss_dssp EEEEEECSCHHHHHH-HHHHHHHSC---TTTEE-EEEEETT
T ss_pred eEEEeCCCCCchHHH-HHHHHHHHH---hcCCe-EEEEEec
Confidence 345789999999877 676665533 34555 5555444
No 233
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.87 E-value=0.00026 Score=47.73 Aligned_cols=37 Identities=5% Similarity=-0.041 Sum_probs=27.3
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
++.|+++|||+|... .+.|.++..++ .|+. +.-+..+
T Consensus 3 v~~f~~~~C~~C~~~-~~~l~~l~~~~--~~i~-~~~vdi~ 39 (85)
T 1ego_A 3 TVIFGRSGCPYCVRA-KDLAEKLSNER--DDFQ-YQYVDIR 39 (85)
T ss_dssp EEEECCTTSTHHHHH-HHHHHHHHHHH--SSCE-EEEECHH
T ss_pred EEEEeCCCCCCHHHH-HHHHHHHHhcC--CCce-EEEEecc
Confidence 345899999999987 77777776654 4677 7777553
No 234
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=96.83 E-value=0.0003 Score=56.52 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=26.2
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEE
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICV 117 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~I 117 (203)
+++|+.|+..|||+|... .+.+.++ .+.|++ |.-+
T Consensus 87 k~~vv~F~d~~Cp~C~~~-~~~l~~~----~~~~v~-v~~~ 121 (211)
T 1t3b_A 87 KHVVTVFMDITCHYCHLL-HQQLKEY----NDLGIT-VRYL 121 (211)
T ss_dssp SEEEEEEECTTCHHHHHH-HTTHHHH----HHTTEE-EEEE
T ss_pred CEEEEEEECCCCHhHHHH-HHHHHHH----HhCCcE-EEEE
Confidence 477888999999999988 5887763 334676 6544
No 235
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.82 E-value=0.0019 Score=49.55 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=36.2
Q ss_pred eeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC-CcEEEEEec
Q 028808 66 TTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG-IDSVICVAV 119 (203)
Q Consensus 66 ~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g-v~~vi~IS~ 119 (203)
.+.+.+ -.++ +.|+.|+..+||+|..- .+.+.++.+++.+.| ++ ++-...
T Consensus 19 ~~~~G~-~~a~-v~i~~f~D~~Cp~C~~~-~~~~~~~~~~~~~~~~v~-~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGE-SNAP-VKMIEFINVRCPYCRKW-FEESEELLAQSVKSGKVE-RIIKLF 69 (175)
T ss_dssp SEEESC-TTCS-EEEEEEECTTCHHHHHH-HHHHHHHHHHHHHTTSEE-EEEEEC
T ss_pred CcccCC-CCCC-eEEEEEECCCCcchHHH-HHHHHHHHHHHhhCCcEE-EEEEeC
Confidence 456666 3555 77788999999999988 688888888885443 55 665443
No 236
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.64 E-value=0.00031 Score=49.89 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=23.5
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
.+|+.|++.|||+|..- .+.|.++ ..++. +.-|..|
T Consensus 17 ~~v~~f~~~~C~~C~~~-~~~L~~l-----~~~i~-~~~vdi~ 52 (100)
T 1wjk_A 17 PVLTLFTKAPCPLCDEA-KEVLQPY-----KDRFI-LQEVDIT 52 (100)
T ss_dssp CEEEEEECSSCHHHHHH-HHHTSTT-----SSSSE-EEEEETT
T ss_pred CEEEEEeCCCCcchHHH-HHHHHHh-----hhCCe-EEEEECC
Confidence 45666999999999765 4444432 23466 7677665
No 237
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.62 E-value=0.0019 Score=42.18 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=23.1
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND 121 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~ 121 (203)
+..|++.|||+|... .+.|. ++|+. +..+..+.
T Consensus 3 i~~y~~~~C~~C~~~-~~~l~-------~~~i~-~~~~di~~ 35 (75)
T 1r7h_A 3 ITLYTKPACVQCTAT-KKALD-------RAGLA-YNTVDISL 35 (75)
T ss_dssp EEEEECTTCHHHHHH-HHHHH-------HTTCC-CEEEETTT
T ss_pred EEEEeCCCChHHHHH-HHHHH-------HcCCC-cEEEECCC
Confidence 345899999999865 44443 45777 77777764
No 238
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.60 E-value=0.00089 Score=48.68 Aligned_cols=37 Identities=8% Similarity=0.134 Sum_probs=26.5
Q ss_pred EEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 79 VIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 79 VL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
+|+.|+++|||+|..- .+.|.++.++ .|+. +.-|.+|
T Consensus 31 ~vv~y~~~~C~~C~~a-~~~L~~l~~e---~~i~-~~~vDId 67 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEM-IASLRVLQKK---SWFE-LEVINID 67 (107)
T ss_dssp CEEEEECSSCHHHHHH-HHHHHHHHHH---SCCC-CEEEETT
T ss_pred EEEEEeCCCChhHHHH-HHHHHHHHHh---cCCe-EEEEECC
Confidence 4667999999999876 5666666544 4577 6666665
No 239
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.49 E-value=0.00078 Score=52.39 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=29.7
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEe
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVA 118 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS 118 (203)
.++ +.|+.|+..+||.|... .+.+.++.+++.. .+. +.-+.
T Consensus 24 ~a~-v~i~~f~d~~Cp~C~~~-~~~l~~l~~~~~~-~v~-~~~~p 64 (193)
T 2rem_A 24 AGK-IEVVEIFGYTCPHCAHF-DSKLQAWGARQAK-DVR-FTLVP 64 (193)
T ss_dssp TTC-EEEEEEECTTCHHHHHH-HHHHHHHHHTSCT-TEE-EEEEE
T ss_pred CCC-eEEEEEECCCChhHhhh-hHHHHHHHHhcCC-ceE-EEEeC
Confidence 344 67788999999999998 6888887776643 354 54444
No 240
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.48 E-value=0.0014 Score=52.41 Aligned_cols=55 Identities=11% Similarity=-0.052 Sum_probs=36.6
Q ss_pred CeEEEEEe----eCCCCCCCCccchhhHHHhHHHHHHc-CCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 76 KKVVIFGL----PGAYTGVCSNQHVPSYKNNIDKFKAK-GIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 76 k~vVL~~f----~~~~cp~C~~ehl~~l~~~~~~f~~~-gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
++++|++| |+.||+.|..- +|.+.+++.++.+. .+. +..|..+. ..+.++++++.
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~-~~~~~~~a~~~~~~~~v~-~~~vd~~~---~~~l~~~~~v~ 80 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEEL-LKETVEVIGEAVGQDKIK-LDIYSPFT---HKEETEKYGVD 80 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHH-HHHHHHHHHHHHCTTTEE-EEEECTTT---CHHHHHHTTCC
T ss_pred CCeEEEEEccCCCCcccHHHHHH-HHHHHHHHhccCCCCceE-EEEecCcc---cHHHHHHcCCC
Confidence 45777778 57777777776 78888887777432 354 66665543 35667777765
No 241
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=96.33 E-value=0.0028 Score=51.84 Aligned_cols=37 Identities=8% Similarity=0.251 Sum_probs=25.9
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEe
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVA 118 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS 118 (203)
+++|+.|+..|||+|... .+.+.++.++ .++. |+-+.
T Consensus 98 k~~v~~F~D~~Cp~C~~~-~~~l~~~~~~---g~v~-v~~~~ 134 (241)
T 1v58_A 98 PVIVYVFADPFCPYCKQF-WQQARPWVDS---GKVQ-LRTLL 134 (241)
T ss_dssp SEEEEEEECTTCHHHHHH-HHHHHHHHHT---TSEE-EEEEE
T ss_pred CeEEEEEECCCChhHHHH-HHHHHHHHhC---CcEE-EEEEE
Confidence 467888999999999988 5777665432 2365 55443
No 242
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.09 E-value=0.004 Score=56.41 Aligned_cols=52 Identities=6% Similarity=-0.093 Sum_probs=38.4
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
++.+..||+.|||+|..- .|.|+++..++. ++. +.-|..+. ..+.++++++.
T Consensus 118 ~~~i~~f~a~~C~~C~~~-~~~l~~~a~~~~--~v~-~~~vd~~~---~~~~~~~~~i~ 169 (521)
T 1hyu_A 118 DFEFETYYSLSCHNCPDV-VQALNLMAVLNP--RIK-HTAIDGGT---FQNEITERNVM 169 (521)
T ss_dssp CEEEEEEECTTCSSHHHH-HHHHHHHHHHCT--TEE-EEEEETTT---CHHHHHHTTCC
T ss_pred CcceEEEECCCCcCcHHH-HHHHHHHHhHcC--ceE-EEEEechh---hHHHHHHhCCC
Confidence 467888999999999987 788888776654 466 77777664 34566777763
No 243
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.07 E-value=0.011 Score=40.23 Aligned_cols=52 Identities=6% Similarity=-0.006 Sum_probs=33.3
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHh-CCCCceEEEee
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKL-QAKDVIEFYGD 143 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~-~l~~~fpllsD 143 (203)
+.|..+|||+|..- .+.| +++|+. +.-+..+ +....++.+.. +.. .+|.+..
T Consensus 9 ~~y~~~~C~~C~~~-~~~L-------~~~~i~-~~~vdv~-~~~~~~l~~~~~~~~-~vP~l~~ 61 (89)
T 2klx_A 9 ILYTRPNCPYCKRA-RDLL-------DKKGVK-YTDIDAS-TSLRQEMVQRANGRN-TFPQIFI 61 (89)
T ss_dssp EEESCSCCTTTHHH-HHHH-------HHHTCC-EEEECSC-HHHHHHHHHHHHSSC-CSCEEEE
T ss_pred EEEECCCChhHHHH-HHHH-------HHcCCC-cEEEECC-HHHHHHHHHHhCCCC-CcCEEEE
Confidence 35889999999764 3333 345677 7778777 44455666666 654 4666543
No 244
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.67 E-value=0.0082 Score=41.60 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=14.4
Q ss_pred EEEeeCCCCCCCCccchhhHH
Q 028808 80 IFGLPGAYTGVCSNQHVPSYK 100 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~ 100 (203)
|+.||++|||+|..- .+.|.
T Consensus 3 vv~f~a~~C~~C~~~-~~~L~ 22 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQA-VEALA 22 (87)
T ss_dssp EEEEECSSCHHHHHH-HHHHH
T ss_pred EEEEECCCCchHHHH-HHHHH
Confidence 456999999999865 34443
No 245
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=95.48 E-value=0.0013 Score=48.56 Aligned_cols=40 Identities=5% Similarity=-0.012 Sum_probs=30.2
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
..|++.||+. |.+|..- .|.|.+++++|+.+ +. ++-|..|
T Consensus 24 ~pv~v~f~a~-~~~c~~~-~p~l~~~A~~~~gk-~~-f~~vd~d 63 (133)
T 2djk_A 24 IPLAYIFAET-AEERKEL-SDKLKPIAEAQRGV-IN-FGTIDAK 63 (133)
T ss_dssp SCEEEEECSC-SSSHHHH-HHHHHHHHHSSTTT-SE-EEEECTT
T ss_pred CCEEEEEecC-hhhHHHH-HHHHHHHHHHhCCe-EE-EEEEchH
Confidence 3577889999 8899876 79999999888654 55 5555543
No 246
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.22 E-value=0.026 Score=39.54 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=25.1
Q ss_pred EeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHH
Q 028808 82 GLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAE 130 (203)
Q Consensus 82 ~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~ 130 (203)
.|..+|||+|..- . +-++++|+. .--+..+.....++...
T Consensus 8 vYs~~~Cp~C~~a--K------~~L~~~gi~-y~~idi~~d~~~~~~~~ 47 (92)
T 2lqo_A 8 IYTTSWCGYCLRL--K------TALTANRIA-YDEVDIEHNRAAAEFVG 47 (92)
T ss_dssp EEECTTCSSHHHH--H------HHHHHTTCC-CEEEETTTCHHHHHHHH
T ss_pred EEcCCCCHhHHHH--H------HHHHhcCCc-eEEEEcCCCHHHHHHHH
Confidence 4889999999753 2 234567888 77777764333333333
No 247
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.14 E-value=0.0029 Score=44.34 Aligned_cols=20 Identities=5% Similarity=0.008 Sum_probs=14.5
Q ss_pred EEeeCCCCCCCCccchhhHHH
Q 028808 81 FGLPGAYTGVCSNQHVPSYKN 101 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~ 101 (203)
+.|+++|||+|..- .+.|.+
T Consensus 15 ~~f~~~~C~~C~~~-~~~L~~ 34 (105)
T 1kte_A 15 VVFIKPTCPFCRKT-QELLSQ 34 (105)
T ss_dssp EEEECSSCHHHHHH-HHHHHH
T ss_pred EEEEcCCCHhHHHH-HHHHHH
Confidence 34889999999865 455544
No 248
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=95.01 E-value=0.018 Score=49.05 Aligned_cols=55 Identities=18% Similarity=0.173 Sum_probs=41.4
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
+.+++.|++.||+.|..- ++.|++++++|+.+ +. ++.|..+.. .....++.+|+.
T Consensus 136 ~~~~v~F~~~~~~~~~~~-~~~~~~~A~~~~~~-i~-f~~vd~~~~-~~~~~~~~fgi~ 190 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGK-LSNFKTAAESFKGK-IL-FIFIDSDHT-DNQRILEFFGLK 190 (361)
T ss_dssp CEEEEEECCSSSSSHHHH-HHHHHHHHGGGTTT-CE-EEEECTTSG-GGHHHHHHTTCC
T ss_pred CcEEEEEEeCCchhHHHH-HHHHHHHHHHccCc-eE-EEEecCChH-HHHHHHHHcCCC
Confidence 456778899999999987 89999999999865 66 777766632 135566777764
No 249
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=94.91 E-value=0.021 Score=47.30 Aligned_cols=52 Identities=10% Similarity=0.169 Sum_probs=35.0
Q ss_pred eEEEEEee--CCCCCCCCccchhhHHHhHHHHHH--cCCcEEEEEecCC--HHHHHHHHHHhCC
Q 028808 77 KVVIFGLP--GAYTGVCSNQHVPSYKNNIDKFKA--KGIDSVICVAVND--PYVMNGWAEKLQA 134 (203)
Q Consensus 77 ~vVL~~f~--~~~cp~C~~ehl~~l~~~~~~f~~--~gv~~vi~IS~d~--~~~~~~~~~~~~l 134 (203)
+.||+.|| ++||+ - .|.|.+++++|+. ..+. |.-|.+++ .......++++++
T Consensus 34 ~~vlV~Fy~~ApWCg----l-~P~~e~lA~~~~~~~~~v~-~akVD~d~~g~~~n~~la~~~~V 91 (248)
T 2c0g_A 34 PYSVVKFDIASPYGE----K-HEAFTAFSKSAHKATKDLL-IATVGVKDYGELENKALGDRYKV 91 (248)
T ss_dssp SEEEEEEEESSCCSH----H-HHHHHHHHHHHHHHCSSEE-EEEEEECSSTTCTTHHHHHHTTC
T ss_pred CCEEEEEECCCCCCc----c-HHHHHHHHHHHhccCCCeE-EEEEECCcccccccHHHHHHhCC
Confidence 36777888 99998 4 6999999999975 3455 66677655 1112345555555
No 250
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.91 E-value=0.037 Score=37.55 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=32.5
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhCCCCceEEEee
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-PYVMNGWAEKLQAKDVIEFYGD 143 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~~~l~~~fpllsD 143 (203)
+.|...|||.|..- .+. ++++|++ +.-+..+. +....++.+..+.. .+|.+..
T Consensus 9 ~ly~~~~C~~C~~~-~~~-------L~~~~i~-~~~~di~~~~~~~~~l~~~~~~~-~vP~l~~ 62 (92)
T 2khp_A 9 IIYTRPGCPYCARA-KAL-------LARKGAE-FNEIDASATPELRAEMQERSGRN-TFPQIFI 62 (92)
T ss_dssp EEEECTTCHHHHHH-HHH-------HHHTTCC-CEEEESTTSHHHHHHHHHHHTSS-CCCEEEE
T ss_pred EEEECCCChhHHHH-HHH-------HHHcCCC-cEEEECCCCHHHHHHHHHHhCCC-CcCEEEE
Confidence 34788999999754 333 3345777 77777764 34445566666653 4565544
No 251
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.67 E-value=0.035 Score=36.53 Aligned_cols=53 Identities=6% Similarity=-0.033 Sum_probs=31.3
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhCCCCceEEEee
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-PYVMNGWAEKLQAKDVIEFYGD 143 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~~~l~~~fpllsD 143 (203)
+.|...|||.|..- .+.|. ++|+. +.-+..+. +....++.+.++.. .+|.+..
T Consensus 4 ~~y~~~~C~~C~~~-~~~l~-------~~~i~-~~~~~i~~~~~~~~~~~~~~~~~-~vP~l~~ 57 (82)
T 1fov_A 4 EIYTKETCPYCHRA-KALLS-------SKGVS-FQELPIDGNAAKREEMIKRSGRT-TVPQIFI 57 (82)
T ss_dssp EEEECSSCHHHHHH-HHHHH-------HHTCC-CEEEECTTCSHHHHHHHHHHSSC-CSCEEEE
T ss_pred EEEECCCChhHHHH-HHHHH-------HCCCC-cEEEECCCCHHHHHHHHHHhCCC-CcCEEEE
Confidence 34788999999754 33333 34676 66666654 33444556666654 4555543
No 252
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=94.63 E-value=0.012 Score=48.48 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=27.9
Q ss_pred eEEEEEeeC--CCCCCCCccchhhHHHhHHHHHH-cCCcEEEEEecC
Q 028808 77 KVVIFGLPG--AYTGVCSNQHVPSYKNNIDKFKA-KGIDSVICVAVN 120 (203)
Q Consensus 77 ~vVL~~f~~--~~cp~C~~ehl~~l~~~~~~f~~-~gv~~vi~IS~d 120 (203)
+.||+.|++ +||+ - .|.|.++.++++. .++. +.-|.+|
T Consensus 23 ~~vlV~FyA~~pWCg----l-~P~~e~lA~~~~~~~~v~-~akVDvd 63 (240)
T 2qc7_A 23 KFVLVKFDTQYPYGE----K-QDEFKRLAENSASSDDLL-VAEVGIS 63 (240)
T ss_dssp SEEEEEECCSSCCSH----H-HHHHHHHHHHHTTCTTEE-EEEECCC
T ss_pred CCEEEEEeCCCCCCc----c-hHHHHHHHHHhcCCCCeE-EEEEeCC
Confidence 367888999 9999 4 6999999999875 2344 5555544
No 253
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.58 E-value=0.028 Score=39.96 Aligned_cols=51 Identities=12% Similarity=0.161 Sum_probs=28.4
Q ss_pred EeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC----HHHHHHHHHH-hCCCCceEEEe
Q 028808 82 GLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND----PYVMNGWAEK-LQAKDVIEFYG 142 (203)
Q Consensus 82 ~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~----~~~~~~~~~~-~~l~~~fplls 142 (203)
.|+.+|||+|..- .+- ++++|+. .-.+..+. ....+++..+ .+.. .+|.+.
T Consensus 23 vy~~~~Cp~C~~~-~~~-------L~~~~i~-~~~~di~~~~~~~~~~~~~l~~~~g~~-tvP~if 78 (113)
T 3rhb_A 23 IYSKTWCSYCTEV-KTL-------FKRLGVQ-PLVVELDQLGPQGPQLQKVLERLTGQH-TVPNVF 78 (113)
T ss_dssp EEECTTCHHHHHH-HHH-------HHHTTCC-CEEEEGGGSTTHHHHHHHHHHHHHSCC-SSCEEE
T ss_pred EEECCCChhHHHH-HHH-------HHHcCCC-CeEEEeecCCCChHHHHHHHHHHhCCC-CcCEEE
Confidence 4889999999754 333 3345666 55555543 2333444433 4654 466554
No 254
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.46 E-value=0.028 Score=39.54 Aligned_cols=50 Identities=10% Similarity=0.121 Sum_probs=27.7
Q ss_pred EeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCH-HHHHHHHHHh-CCCCceEEE
Q 028808 82 GLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDP-YVMNGWAEKL-QAKDVIEFY 141 (203)
Q Consensus 82 ~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~-~~~~~~~~~~-~l~~~fpll 141 (203)
.|..+|||+|..- ..- ++++|+. +.-+..+.. .....+.+.. +.. .+|.+
T Consensus 20 vy~~~~Cp~C~~a-k~~-------L~~~~i~-y~~idI~~~~~~~~~l~~~~~g~~-~vP~i 71 (99)
T 3qmx_A 20 IYTWSTCPFCMRA-LAL-------LKRKGVE-FQEYCIDGDNEAREAMAARANGKR-SLPQI 71 (99)
T ss_dssp EEECTTCHHHHHH-HHH-------HHHHTCC-CEEEECTTCHHHHHHHHHHTTTCC-CSCEE
T ss_pred EEEcCCChhHHHH-HHH-------HHHCCCC-CEEEEcCCCHHHHHHHHHHhCCCC-CCCEE
Confidence 4899999999754 222 3345676 666666543 3333343433 443 34444
No 255
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=94.45 E-value=0.0022 Score=54.61 Aligned_cols=37 Identities=8% Similarity=0.038 Sum_probs=26.0
Q ss_pred eeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHH
Q 028808 65 ATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNID 104 (203)
Q Consensus 65 ~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~ 104 (203)
..+.+++.++.. .++.|+++|||+|.+. .|.|+++.+
T Consensus 188 ~~~~la~~l~~~--~vV~F~A~WC~~Ck~l-~p~le~lA~ 224 (291)
T 3kp9_A 188 LAVGLAAHLRQI--GGTMYGAYWCPHCQDQ-KELFGAAFD 224 (291)
T ss_dssp THHHHHHHHHHT--TCEEEECTTCHHHHHH-HHHHGGGGG
T ss_pred HHHHHHHHhCCC--CEEEEECCCCHHHHHH-HHHHHHHHH
Confidence 456676654433 2457899999999988 788877653
No 256
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.43 E-value=0.043 Score=40.38 Aligned_cols=50 Identities=4% Similarity=0.035 Sum_probs=28.8
Q ss_pred eeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC----HHHHHHHHHHhCCCCceEEEe
Q 028808 83 LPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND----PYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 83 f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~----~~~~~~~~~~~~l~~~fplls 142 (203)
|+..|||+|..- .+.|. ++|+. +..+..|. +.....+.+..+.. .+|.+.
T Consensus 32 f~~~~Cp~C~~~-~~~L~-------~~~i~-~~~vdid~~~~~~~~~~~l~~~~g~~-~vP~l~ 85 (130)
T 2cq9_A 32 FSKTSCSYCTMA-KKLFH-------DMNVN-YKVVELDLLEYGNQFQDALYKMTGER-TVPRIF 85 (130)
T ss_dssp EECSSCSHHHHH-HHHHH-------HHTCC-CEEEETTTSTTHHHHHHHHHHHHSSC-CSSEEE
T ss_pred EEcCCChHHHHH-HHHHH-------HcCCC-cEEEECcCCcCcHHHHHHHHHHhCCC-CcCEEE
Confidence 889999999765 34333 34566 55666653 22233455556653 355443
No 257
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.25 E-value=0.11 Score=36.69 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=36.6
Q ss_pred cccCCCeEEEEEeeC----CCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhCCCCceEEEe
Q 028808 71 DIFKGKKVVIFGLPG----AYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-PYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 71 dl~~gk~vVL~~f~~----~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~~~l~~~fplls 142 (203)
++.+..+++ +|+.+ .|||+|..- .. -++++|+. +.-+..+. +.....+.+..+.. .+|.+.
T Consensus 10 ~~i~~~~vv-vy~~g~~~~~~Cp~C~~a-k~-------~L~~~~i~-~~~vdi~~~~~~~~~l~~~~g~~-~vP~if 75 (109)
T 1wik_A 10 VLTNKASVM-LFMKGNKQEAKCGFSKQI-LE-------ILNSTGVE-YETFDILEDEEVRQGLKTFSNWP-TYPQLY 75 (109)
T ss_dssp HHHTTSSEE-EEESSTTTCCCSSTHHHH-HH-------HHHHTCSC-EEEEESSSCHHHHHHHHHHHSCC-SSCEEE
T ss_pred HHhccCCEE-EEEecCCCCCCCchHHHH-HH-------HHHHcCCC-eEEEECCCCHHHHHHHHHHhCCC-CCCEEE
Confidence 333444444 44554 899999753 22 23456888 88888764 44455566666654 476665
No 258
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=93.69 E-value=0.047 Score=41.26 Aligned_cols=50 Identities=4% Similarity=0.035 Sum_probs=28.3
Q ss_pred eeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC----HHHHHHHHHHhCCCCceEEEe
Q 028808 83 LPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND----PYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 83 f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~----~~~~~~~~~~~~l~~~fplls 142 (203)
|+++|||+|..- .+.|. +.|+. +..+..|. +....++.+..+.. .+|.+.
T Consensus 54 f~~~~Cp~C~~~-k~~L~-------~~~i~-~~~vdId~~~~~~~~~~~L~~~~g~~-tvP~if 107 (146)
T 2ht9_A 54 FSKTSCSYCTMA-KKLFH-------DMNVN-YKVVELDLLEYGNQFQDALYKMTGER-TVPRIF 107 (146)
T ss_dssp EECTTCHHHHHH-HHHHH-------HHTCC-CEEEEGGGCTTHHHHHHHHHHHHSCC-CSCEEE
T ss_pred EECCCChhHHHH-HHHHH-------HcCCC-eEEEECccCcCCHHHHHHHHHHhCCC-CcCeEE
Confidence 899999999865 44443 33565 55555542 22233455555553 355543
No 259
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=93.67 E-value=0.036 Score=37.62 Aligned_cols=31 Identities=13% Similarity=0.200 Sum_probs=18.8
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
..|..+|||.|..- ...|. ++|++ .-.+..+
T Consensus 15 ~ly~~~~Cp~C~~~-~~~L~-------~~gi~-~~~~~v~ 45 (92)
T 3ic4_A 15 LMYGLSTCPHCKRT-LEFLK-------REGVD-FEVIWID 45 (92)
T ss_dssp EEEECTTCHHHHHH-HHHHH-------HHTCC-CEEEEGG
T ss_pred EEEECCCChHHHHH-HHHHH-------HcCCC-cEEEEee
Confidence 34889999999764 33333 34555 4455554
No 260
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=93.39 E-value=0.077 Score=37.25 Aligned_cols=47 Identities=11% Similarity=0.051 Sum_probs=27.1
Q ss_pred CCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhCCCCceEEEe
Q 028808 86 AYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-PYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 86 ~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~~~l~~~fplls 142 (203)
+|||+|..- .+.| +++|+. +.-+..+. +.....+.+..+.. .+|.+.
T Consensus 30 ~~C~~C~~~-~~~L-------~~~~i~-~~~vdi~~~~~~~~~l~~~~g~~-~vP~v~ 77 (105)
T 2yan_A 30 AKCGFSKQI-LEIL-------NSTGVE-YETFDILEDEEVRQGLKAYSNWP-TYPQLY 77 (105)
T ss_dssp BCTTHHHHH-HHHH-------HHHTCC-CEEEEGGGCHHHHHHHHHHHTCC-SSCEEE
T ss_pred CCCccHHHH-HHHH-------HHCCCC-eEEEECCCCHHHHHHHHHHHCCC-CCCeEE
Confidence 899999754 3333 344677 66776653 44444455555654 355553
No 261
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=93.33 E-value=0.067 Score=38.68 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=20.1
Q ss_pred EeeCCCCCCCCccchhhHHHhHHHHHHcC---CcEEEEEecC
Q 028808 82 GLPGAYTGVCSNQHVPSYKNNIDKFKAKG---IDSVICVAVN 120 (203)
Q Consensus 82 ~f~~~~cp~C~~ehl~~l~~~~~~f~~~g---v~~vi~IS~d 120 (203)
.|+++|||+|.. + |. +-+++.| +. +..+..|
T Consensus 29 vf~~~~Cp~C~~--a--lk---~~L~~~~~~~i~-~~~vdid 62 (118)
T 3c1r_A 29 VASKTYCPYCHA--A--LN---TLFEKLKVPRSK-VLVLQLN 62 (118)
T ss_dssp EEECSSCHHHHH--H--HH---HHHTTSCCCGGG-EEEEEGG
T ss_pred EEEcCCCcCHHH--H--HH---HHHHHcCCCCCC-eEEEECc
Confidence 488999999963 2 12 2344566 76 6667665
No 262
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=93.09 E-value=0.089 Score=36.77 Aligned_cols=31 Identities=16% Similarity=0.078 Sum_probs=19.3
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
+.|+.+|||+|..- .+.|. ++|+. .-.+..+
T Consensus 25 ~ly~~~~Cp~C~~a-k~~L~-------~~~i~-y~~vdI~ 55 (103)
T 3nzn_A 25 IMYGLSTCVWCKKT-KKLLT-------DLGVD-FDYVYVD 55 (103)
T ss_dssp EEEECSSCHHHHHH-HHHHH-------HHTBC-EEEEEGG
T ss_pred EEEcCCCCchHHHH-HHHHH-------HcCCC-cEEEEee
Confidence 34899999999764 33333 34565 5455554
No 263
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=92.46 E-value=0.14 Score=36.60 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=30.6
Q ss_pred CeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC---CHHHHHH-HHHHhCCCCceEEEe
Q 028808 76 KKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN---DPYVMNG-WAEKLQAKDVIEFYG 142 (203)
Q Consensus 76 k~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d---~~~~~~~-~~~~~~l~~~fplls 142 (203)
++++| |..+|||.|..- ..- ++++|+. .-.+..| +....++ ..+..+.. .+|.+.
T Consensus 17 ~~v~v--y~~~~Cp~C~~a-k~~-------L~~~~i~-~~~~dvd~~~~~~~~~~~l~~~~g~~-tvP~vf 75 (114)
T 3h8q_A 17 SRVVI--FSKSYCPHSTRV-KEL-------FSSLGVE-CNVLELDQVDDGARVQEVLSEITNQK-TVPNIF 75 (114)
T ss_dssp CSEEE--EECTTCHHHHHH-HHH-------HHHTTCC-CEEEETTTSTTHHHHHHHHHHHHSCC-SSCEEE
T ss_pred CCEEE--EEcCCCCcHHHH-HHH-------HHHcCCC-cEEEEecCCCChHHHHHHHHHHhCCC-ccCEEE
Confidence 33444 889999999753 222 3345676 6566665 2333333 34555654 455554
No 264
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=92.15 E-value=0.047 Score=39.02 Aligned_cols=19 Identities=11% Similarity=0.025 Sum_probs=13.4
Q ss_pred EEeeCCCCCCCCccchhhHH
Q 028808 81 FGLPGAYTGVCSNQHVPSYK 100 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~ 100 (203)
+.|+++|||+|..- .+.|.
T Consensus 22 v~f~~~~Cp~C~~~-~~~L~ 40 (114)
T 2hze_A 22 TIFVKYTCPFCRNA-LDILN 40 (114)
T ss_dssp EEEECTTCHHHHHH-HHHHT
T ss_pred EEEEeCCChhHHHH-HHHHH
Confidence 34889999999765 44433
No 265
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=92.04 E-value=0.036 Score=43.42 Aligned_cols=41 Identities=22% Similarity=0.386 Sum_probs=29.1
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~ 119 (203)
++ ++|+.|+..|||+|..- .|.+.++.+++.+ .+. +.-+..
T Consensus 24 ~~-v~vv~f~d~~Cp~C~~~-~~~l~~~~~~~~~-~v~-~~~~p~ 64 (193)
T 3hz8_A 24 GK-VEVLEFFGYFCPHCAHL-EPVLSKHAKSFKD-DMY-LRTEHV 64 (193)
T ss_dssp TS-EEEEEEECTTCHHHHHH-HHHHHHHHTTCCT-TEE-EEEEEC
T ss_pred CC-cEEEEEECCCChhHHHH-HHHHHHHHHHCCC-CeE-EEEecC
Confidence 44 77888999999999987 5888777666654 343 444444
No 266
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=91.26 E-value=0.28 Score=32.46 Aligned_cols=33 Identities=12% Similarity=0.041 Sum_probs=19.7
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND 121 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~ 121 (203)
+..|...|||.|..- .. -++++|+. +--+..|.
T Consensus 6 v~ly~~~~Cp~C~~~-~~-------~L~~~~i~-~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYTRNGCPYCVWA-KQ-------WFEENNIA-FDETIIDD 38 (89)
T ss_dssp EEEEECTTCHHHHHH-HH-------HHHHTTCC-CEEEECCS
T ss_pred EEEEEcCCChhHHHH-HH-------HHHHcCCC-ceEEEeec
Confidence 445889999999754 22 23455655 44444443
No 267
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.96 E-value=0.55 Score=33.37 Aligned_cols=47 Identities=9% Similarity=0.015 Sum_probs=27.1
Q ss_pred EeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHH
Q 028808 82 GLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-PYVMNGWAEK 131 (203)
Q Consensus 82 ~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~ 131 (203)
.|..++||.|..- ..-++...-++++|+. +.-+..+. +...+++.+.
T Consensus 12 vy~~~~C~~C~~~--~~~~~ak~~L~~~gi~-y~~vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 12 VFIASSSGFVAIK--KKQQDVVRFLEANKIE-FEEVDITMSEEQRQWMYKN 59 (111)
T ss_dssp EEECSSCSCHHHH--HHHHHHHHHHHHTTCC-EEEEETTTCHHHHHHHHHS
T ss_pred EEEcCCCCCcccc--hhHHHHHHHHHHcCCC-EEEEECCCCHHHHHHHHHH
Confidence 4678999999730 1122233445677888 77777764 3333334433
No 268
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=90.96 E-value=0.02 Score=45.39 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=30.1
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhH---HHhHHHHHHcCCcEEEEEecC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSY---KNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l---~~~~~~f~~~gv~~vi~IS~d 120 (203)
.++ ++|+-|++.|||+|..- .|.+ .++.+++.+ ++. +.-+..+
T Consensus 112 ~~~-~~vveFf~~~C~~C~~~-~p~~~~~~~l~~~~~~-~v~-~~~~~v~ 157 (197)
T 1un2_A 112 AGA-PQVLEFFSFFCPHCYQF-EEVLHISDNVKKKLPE-GVK-MTKYHVN 157 (197)
T ss_dssp TTC-CSEEEEECTTCHHHHHH-HHTSCHHHHHTTSSCT-TCC-EEEEECS
T ss_pred CCC-CEEEEEECCCChhHHHh-CcccccHHHHHHHCCC-CCE-EEEeccC
Confidence 355 57778999999999876 5766 666655543 466 7666654
No 269
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=90.04 E-value=0.21 Score=35.71 Aligned_cols=61 Identities=10% Similarity=0.059 Sum_probs=33.8
Q ss_pred ccccCCCeEEEEEeeC-----CCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC-CHHHHHHHHHHhCCCCceEEEe
Q 028808 70 KDIFKGKKVVIFGLPG-----AYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN-DPYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 70 ~dl~~gk~vVL~~f~~-----~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d-~~~~~~~~~~~~~l~~~fplls 142 (203)
.++.+..+||| |-. +|||.|..- . .-++++|+. ..-+..+ ++.....+.+..|.. .+|.+.
T Consensus 10 ~~~i~~~~Vvl--f~kg~~~~~~Cp~C~~a--k------~~L~~~gi~-y~~~di~~d~~~~~~l~~~~g~~-tvP~if 76 (111)
T 3zyw_A 10 KKLTHAAPCML--FMKGTPQEPRCGFSKQM--V------EILHKHNIQ-FSSFDIFSDEEVRQGLKAYSSWP-TYPQLY 76 (111)
T ss_dssp HHHHTSSSEEE--EESBCSSSBSSHHHHHH--H------HHHHHTTCC-CEEEEGGGCHHHHHHHHHHHTCC-SSCEEE
T ss_pred HHHHhcCCEEE--EEecCCCCCcchhHHHH--H------HHHHHcCCC-eEEEECcCCHHHHHHHHHHHCCC-CCCEEE
Confidence 34445555655 345 899999753 2 224456777 6666654 344444444444544 466554
No 270
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=89.95 E-value=0.53 Score=31.53 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=27.8
Q ss_pred EeeCC----CCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC------CHHHHHHHHHHhCC
Q 028808 82 GLPGA----YTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN------DPYVMNGWAEKLQA 134 (203)
Q Consensus 82 ~f~~~----~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d------~~~~~~~~~~~~~l 134 (203)
.|..+ |||.|.+- . .-++++|+. .--+..+ ++....++.+..+.
T Consensus 4 iY~~~~~~~~Cp~C~~a--k------~~L~~~gi~-y~~idI~~~~~~~~~~~~~~l~~~~g~ 57 (87)
T 1aba_A 4 VYGYDSNIHKCGPCDNA--K------RLLTVKKQP-FEFINIMPEKGVFDDEKIAELLTKLGR 57 (87)
T ss_dssp EEECCTTTSCCHHHHHH--H------HHHHHTTCC-EEEEESCSBTTBCCHHHHHHHHHHHTC
T ss_pred EEEeCCCCCcCccHHHH--H------HHHHHcCCC-EEEEEeeccccccCHHHHHHHHHHhCC
Confidence 47788 99999643 2 234567787 6677666 34445555555554
No 271
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=89.59 E-value=0.35 Score=35.49 Aligned_cols=53 Identities=11% Similarity=0.181 Sum_probs=28.4
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcC---CcEEEEEecCCH----HHHHHHHHHhCCCCceEEEe
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKG---IDSVICVAVNDP----YVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g---v~~vi~IS~d~~----~~~~~~~~~~~l~~~fplls 142 (203)
+.|+.+|||+|.. + |.+ -++++| +. +-.+..|.. .......+..+.. .+|.+.
T Consensus 40 vvy~~~~Cp~C~~--a--~k~---~L~~~~~~~i~-~~~vdvd~~~~~~~~~~~L~~~~g~~-tVP~vf 99 (129)
T 3ctg_A 40 FVAAKTYCPYCKA--T--LST---LFQELNVPKSK-ALVLELDEMSNGSEIQDALEEISGQK-TVPNVY 99 (129)
T ss_dssp EEEECTTCHHHHH--H--HHH---HHTTSCCCGGG-EEEEEGGGSTTHHHHHHHHHHHHSCC-SSCEEE
T ss_pred EEEECCCCCchHH--H--HHH---HHHhcCccCCC-cEEEEccccCCHHHHHHHHHHHhCCC-CCCEEE
Confidence 3478999999963 2 122 234556 66 556655421 2233445555553 355543
No 272
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=89.54 E-value=0.19 Score=40.71 Aligned_cols=58 Identities=7% Similarity=0.011 Sum_probs=33.9
Q ss_pred CeEEEEEeeCCC--CCCCCccchhhHHHhHHHHHH-cC---CcEEEEEecCCHHHHHHHHHHhCCCCceEE
Q 028808 76 KKVVIFGLPGAY--TGVCSNQHVPSYKNNIDKFKA-KG---IDSVICVAVNDPYVMNGWAEKLQAKDVIEF 140 (203)
Q Consensus 76 k~vVL~~f~~~~--cp~C~~ehl~~l~~~~~~f~~-~g---v~~vi~IS~d~~~~~~~~~~~~~l~~~fpl 140 (203)
++ |++.||+.| |+.|..- .+.+.++.+++.. +| +. ++-+..++ ....++++++. .+|.
T Consensus 26 ~p-v~v~~~~~~~~c~~c~~~-~~~l~ela~~~~~~~~~~~v~-~~~vd~d~---~~~~~~~~gv~-~~Pt 89 (243)
T 2hls_A 26 NP-VEVHVFLSKSGCETCEDT-LRLMKLFEEESPTRNGGKLLK-LNVYYRES---DSDKFSEFKVE-RVPT 89 (243)
T ss_dssp SC-EEEEEEECSSSCTTHHHH-HHHHHHHHHHSCEETTEESEE-EEEEETTT---THHHHHHTTCC-SSSE
T ss_pred CC-EEEEEEeCCCCCCchHHH-HHHHHHHHHhccCCCCCceeE-EEEecCCc---CHHHHHhcCCC-cCCE
Confidence 44 455677888 9999754 4555665554211 12 54 55666554 24567778875 4543
No 273
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=89.41 E-value=0.29 Score=36.49 Aligned_cols=47 Identities=13% Similarity=0.081 Sum_probs=28.5
Q ss_pred CCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC-CHHHHHHHHHHhCCCCceEEEe
Q 028808 86 AYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN-DPYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 86 ~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d-~~~~~~~~~~~~~l~~~fplls 142 (203)
.|||.|..- .. -++++|+. +..+..+ ++....++.+..+.+ .+|.+.
T Consensus 48 ~~Cp~C~~a-k~-------~L~~~gv~-y~~vdI~~d~~~~~~L~~~~G~~-tvP~Vf 95 (135)
T 2wci_A 48 PSCGFSAQA-VQ-------ALAACGER-FAYVDILQNPDIRAELPKYANWP-TFPQLW 95 (135)
T ss_dssp BSSHHHHHH-HH-------HHHTTCSC-CEEEEGGGCHHHHHHHHHHHTCC-SSCEEE
T ss_pred CCCccHHHH-HH-------HHHHcCCc-eEEEECCCCHHHHHHHHHHHCCC-CcCEEE
Confidence 799999753 22 23456787 7777765 445455555555654 466654
No 274
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=86.29 E-value=2 Score=29.01 Aligned_cols=49 Identities=10% Similarity=0.013 Sum_probs=25.9
Q ss_pred EeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhC
Q 028808 82 GLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND-PYVMNGWAEKLQ 133 (203)
Q Consensus 82 ~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~~~ 133 (203)
.|..++||.|..- .+=.+...-++++|+. ..-+..+. +....++.+..|
T Consensus 6 ly~~~~C~~c~~~--~~~~~ak~~L~~~~i~-~~~~di~~~~~~~~~l~~~~g 55 (93)
T 1t1v_A 6 VYSTSVTGSREIK--SQQSEVTRILDGKRIQ-YQLVDISQDNALRDEMRTLAG 55 (93)
T ss_dssp EEECSSCSCHHHH--HHHHHHHHHHHHTTCC-CEEEETTSCHHHHHHHHHHTT
T ss_pred EEEcCCCCCchhh--HHHHHHHHHHHHCCCc-eEEEECCCCHHHHHHHHHHhC
Confidence 3678999999310 1111122335567887 76776653 333334444444
No 275
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=83.78 E-value=0.41 Score=37.07 Aligned_cols=39 Identities=15% Similarity=0.125 Sum_probs=28.3
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~ 119 (203)
++ ++|+-|+.-|||+|..- -|.+.++.+++ ++. +.-+..
T Consensus 22 ~~-~~vvef~d~~Cp~C~~~-~~~~~~~~~~~---~v~-~~~~p~ 60 (185)
T 3feu_A 22 GM-APVTEVFALSCGHCRNM-ENFLPVISQEA---GTD-IGKMHI 60 (185)
T ss_dssp CC-CSEEEEECTTCHHHHHH-GGGHHHHHHHH---TSC-CEEEEC
T ss_pred CC-CEEEEEECCCChhHHHh-hHHHHHHHHHh---CCe-EEEEec
Confidence 45 56667888999999987 58888888777 455 544443
No 276
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=83.10 E-value=1 Score=32.57 Aligned_cols=65 Identities=6% Similarity=-0.060 Sum_probs=46.2
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN----DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d----~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+..|-..+||.|.+- ...++++|+. .-.+... +...+++|.++.+++ +.-+.+..+...+.+++.
T Consensus 2 i~iY~~~~C~~c~ka--------~~~L~~~gi~-~~~~di~~~~~~~~el~~~l~~~~~~--~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 2 VTLFLSPSCTSCRKA--------RAWLNRHDVV-FQEHNIMTSPLSRDELLKILSYTENG--TEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEEECSSCHHHHHH--------HHHHHHTTCC-EEEEETTTSCCCHHHHHHHHHHCSST--HHHHBCTTCHHHHHTTCC
T ss_pred EEEEeCCCCHHHHHH--------HHHHHHcCCC-eEEEecccCCCcHHHHHHHHhhcCCC--HHHhhcCCcHHHHHcCCC
Confidence 346778899999764 2335567888 6666653 346788999988775 555667788888888864
No 277
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=82.36 E-value=3.5 Score=32.60 Aligned_cols=38 Identities=5% Similarity=0.034 Sum_probs=30.6
Q ss_pred ceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 137 VIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 137 ~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
.++...|.+..+++.||+.. .|+.++++ +|++....+.
T Consensus 186 ~v~~~~~~~~~l~~~f~v~~-----------~Pslvl~~~~g~~~~~~~~ 224 (244)
T 3q6o_A 186 AVRRVLNTEANVVRKFGVTD-----------FPSCYLLFRNGSVSRVPVL 224 (244)
T ss_dssp EEEEEETTCHHHHHHHTCCC-----------SSEEEEEETTSCEEECCCS
T ss_pred EEEEEeCchHHHHHHcCCCC-----------CCeEEEEeCCCCeEeeccc
Confidence 37777788899999999863 47778889 9999988754
No 278
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=81.06 E-value=1.1 Score=32.90 Aligned_cols=65 Identities=5% Similarity=-0.022 Sum_probs=43.8
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC----HHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND----PYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~----~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+..|...+||.|.+- . ..++++|+. +-.+..+. ...+++|.++.+.+ +.-+.+..+...+.++..
T Consensus 3 i~lY~~~~C~~C~ka-~-------~~L~~~gi~-y~~~di~~~~~~~~el~~~l~~~~~~--~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKA-R-------AWLEEHEIP-FVERNIFSEPLSIDEIKQILRMTEDG--TDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEEECTTCHHHHHH-H-------HHHHHTTCC-EEEEETTTSCCCHHHHHHHHHTCSSC--GGGTBCTTSHHHHHHCCC
T ss_pred EEEEeCCCChHHHHH-H-------HHHHHcCCc-eEEEEccCCCccHHHHHHHHHHcCCC--HHHhhcCCchHHHhcCcc
Confidence 345888999999754 2 234567888 66666542 35677888877764 444567777788887764
No 279
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=79.83 E-value=1.8 Score=30.43 Aligned_cols=60 Identities=15% Similarity=0.196 Sum_probs=30.8
Q ss_pred cccCCCeEEEEEeeC----CCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC-CHHHHHHHHHHhCCCCceEEE
Q 028808 71 DIFKGKKVVIFGLPG----AYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN-DPYVMNGWAEKLQAKDVIEFY 141 (203)
Q Consensus 71 dl~~gk~vVL~~f~~----~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d-~~~~~~~~~~~~~l~~~fpll 141 (203)
++.+..+++| |--+ .|||+|.+- .+-|.++|+. .-.+..+ ++.....+.+..+.. .+|.+
T Consensus 13 ~~i~~~~Vvv-y~k~t~~~p~Cp~C~~a--------k~~L~~~gi~-~~~~dI~~~~~~~~~l~~~~g~~-tvP~i 77 (109)
T 3ipz_A 13 KLVNSEKVVL-FMKGTRDFPMCGFSNTV--------VQILKNLNVP-FEDVNILENEMLRQGLKEYSNWP-TFPQL 77 (109)
T ss_dssp HHHTSSSEEE-EESBCSSSBSSHHHHHH--------HHHHHHTTCC-CEEEEGGGCHHHHHHHHHHHTCS-SSCEE
T ss_pred HHHccCCEEE-EEecCCCCCCChhHHHH--------HHHHHHcCCC-cEEEECCCCHHHHHHHHHHHCCC-CCCeE
Confidence 3344444554 3333 399999643 2234456777 6666664 344334444444543 35544
No 280
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=79.74 E-value=1.6 Score=31.66 Aligned_cols=65 Identities=12% Similarity=0.204 Sum_probs=45.9
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec--C--CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV--N--DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~--d--~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+..|-..+||.|.+- . ..++++|+. +-.+.. + +...+++|.++.|++ ..-+.+..+...+.+++.
T Consensus 5 i~iY~~~~C~~c~ka-~-------~~L~~~gi~-~~~~di~~~~~~~~eL~~~l~~~g~~--~~~l~n~~~~~~k~l~l~ 73 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRA-K-------AELDDLAWD-YDAIDIKKNPPAASLIRNWLENSGLE--LKKFFNTSGQSYRALGLK 73 (120)
T ss_dssp EEEEECSSCHHHHHH-H-------HHHHHHTCC-EEEEETTTSCCCHHHHHHHHHHSCCC--GGGGBCTTSHHHHHTTHH
T ss_pred EEEEeCCCChHHHHH-H-------HHHHHcCCc-eEEEEeccCchhHHHHHHHHHHcCCC--HHHHhCCCCcchhhcCcc
Confidence 456888899999765 2 334567887 656654 3 346788999999875 555667788888888763
No 281
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=79.60 E-value=0.4 Score=37.10 Aligned_cols=43 Identities=9% Similarity=0.092 Sum_probs=26.0
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhH---HHhHHHHHHcCCcEEEEEecC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSY---KNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l---~~~~~~f~~~gv~~vi~IS~d 120 (203)
.+++ +|+-|+..|||+|..- .|.+ .++.+++.+ ++. ++-+...
T Consensus 13 ~~~~-~vvef~d~~Cp~C~~~-~~~~~~~~~~~~~~~~-~v~-~~~~~~~ 58 (189)
T 3l9v_A 13 VDAP-AVVEFFSFYCPPCYAF-SQTMGVDQAIRHVLPQ-GSR-MVKYHVS 58 (189)
T ss_dssp TTCC-SEEEEECTTCHHHHHH-HHTSCHHHHHHTTCCT-TCC-EEEEECS
T ss_pred CCCC-EEEEEECCCChhHHHH-hHhccchHHHHHhCCC-CCE-EEEEech
Confidence 4554 4556779999999875 4654 234333433 477 6666543
No 282
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=77.97 E-value=1.5 Score=31.84 Aligned_cols=65 Identities=12% Similarity=0.150 Sum_probs=45.4
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec--C--CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV--N--DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~--d--~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+..|-..+||.|.+- . ..++++|+. +-.+.. + +...+++|.++.|++ ..-+.+..+...+.+|+.
T Consensus 6 i~iY~~p~C~~c~ka-~-------~~L~~~gi~-~~~~di~~~~~~~~eL~~~l~~~g~~--~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 6 TLFLQYPACSTCQKA-K-------KWLIENNIE-YTNRLIVDDNPTVEELKAWIPLSGLP--VKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp CEEEECTTCHHHHHH-H-------HHHHHTTCC-CEEEETTTTCCCHHHHHHHHHHHTSC--GGGGBCTTSHHHHHTTHH
T ss_pred EEEEECCCChHHHHH-H-------HHHHHcCCc-eEEEecccCcCCHHHHHHHHHHcCCC--HHHeEeCCCchhhhcCcc
Confidence 345778899999765 2 334567777 555544 3 346789999999975 555667788888888764
No 283
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=77.44 E-value=2.1 Score=30.90 Aligned_cols=63 Identities=22% Similarity=0.261 Sum_probs=30.9
Q ss_pred cccccCCCeEEEEEeeC----CCCCCCCccchhhHHHhHHHHHHcCC-cEEEEEecC-CHHHHHHHHHHhCCCCceEEEe
Q 028808 69 IKDIFKGKKVVIFGLPG----AYTGVCSNQHVPSYKNNIDKFKAKGI-DSVICVAVN-DPYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 69 L~dl~~gk~vVL~~f~~----~~cp~C~~ehl~~l~~~~~~f~~~gv-~~vi~IS~d-~~~~~~~~~~~~~l~~~fplls 142 (203)
+.++.+..+||| |--+ .|||+|..- . +-|+++|+ + .-.+..+ +++......+..+.. .+|.+.
T Consensus 13 v~~~i~~~~Vvv-fsk~t~~~p~Cp~C~~a--k------~lL~~~gv~~-~~~vdV~~d~~~~~~l~~~tg~~-tvP~vf 81 (118)
T 2wem_A 13 LDALVKKDKVVV-FLKGTPEQPQCGFSNAV--V------QILRLHGVRD-YAAYNVLDDPELRQGIKDYSNWP-TIPQVY 81 (118)
T ss_dssp HHHHHHHSSEEE-EESBCSSSBSSHHHHHH--H------HHHHHTTCCC-CEEEESSSCHHHHHHHHHHHTCC-SSCEEE
T ss_pred HHHHhccCCEEE-EEecCCCCCccHHHHHH--H------HHHHHcCCCC-CEEEEcCCCHHHHHHHHHHhCCC-CcCeEE
Confidence 444444444554 3333 399999643 2 22345566 4 4455554 344334444444543 365554
No 284
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=76.61 E-value=12 Score=28.04 Aligned_cols=59 Identities=7% Similarity=0.018 Sum_probs=41.6
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhCCCCceEEE--e-eCC----chHHHHcCCc
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVND-PYVMNGWAEKLQAKDVIEFY--G-DFD----GSFHKSLDLG 155 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~-~~~~~~~~~~~~l~~~fpll--s-D~~----~~v~~~yGv~ 155 (203)
.|...+..++++++|+. ++.+|..+ ....+.+.+..++...|..+ + .++ ..+.+.+|+.
T Consensus 70 ~~g~~e~L~~L~~~G~~-v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~ 136 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVP-GAAASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIP 136 (187)
T ss_dssp CTTHHHHHHHHHHHTCC-EEEEECCSCHHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCC
T ss_pred chhHHHHHHHHHHCCce-EEEEeCCCChHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCC
Confidence 47788888899999998 98888877 57788889999885345442 2 222 2345566664
No 285
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=75.73 E-value=7.9 Score=28.22 Aligned_cols=50 Identities=10% Similarity=0.009 Sum_probs=29.1
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC-CHHHHHHHHHHh
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN-DPYVMNGWAEKL 132 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d-~~~~~~~~~~~~ 132 (203)
|..|-.+.||.|..- ..=.+...-++.+|+. .--+.++ ++..-+.+.++.
T Consensus 2 V~vYtt~~c~~c~~k--k~c~~aK~lL~~kgV~-feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 2 IRVYIASSSGSTAIK--KKQQDVLGFLEANKIG-FEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EEEEECTTCSCHHHH--HHHHHHHHHHHHTTCC-EEEEECTTCHHHHHHHHHHS
T ss_pred EEEEecCCCCCccch--HHHHHHHHHHHHCCCc-eEEEECCCCHHHHHHHHHhc
Confidence 455889999999411 1111222335678898 7777775 444444445454
No 286
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=75.33 E-value=1.4 Score=33.00 Aligned_cols=65 Identities=8% Similarity=0.023 Sum_probs=45.4
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcc
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN----DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGK 156 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d----~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~ 156 (203)
..|...+|+.|.+- . ..++++|+. .-.+... +...+.+|..+.+++ ..-+.+..+...+.+++..
T Consensus 5 tiY~~p~C~~crka-k-------~~L~~~gi~-~~~idi~~~~~~~~eL~~~~~~~g~p--~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 5 TIYHNPASGTSRNT-L-------EMIRNSGTE-PTIILYLENPPSRDELVKLIADMGIS--VRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp EEECCTTCHHHHHH-H-------HHHHHTTCC-CEEECTTTSCCCHHHHHHHHHHHTSC--HHHHBCSSSHHHHHTTTTS
T ss_pred EEEECCCChHHHHH-H-------HHHHHcCCC-EEEEECCCCCccHHHHHHHhcccCCC--HHHhccCCchhHHhcCCcc
Confidence 35788899999765 2 334567887 6666553 245788899999885 4445577888888887653
No 287
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=75.18 E-value=1.2 Score=35.35 Aligned_cols=11 Identities=0% Similarity=-0.182 Sum_probs=5.5
Q ss_pred HHHHHHHhCCC
Q 028808 125 MNGWAEKLQAK 135 (203)
Q Consensus 125 ~~~~~~~~~l~ 135 (203)
.++|.++++++
T Consensus 186 a~~~L~~~~i~ 196 (241)
T 1nm3_A 186 AKQLLHDKGLS 196 (241)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHcCCc
Confidence 34455555554
No 288
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=74.14 E-value=1.7 Score=31.53 Aligned_cols=65 Identities=11% Similarity=0.036 Sum_probs=45.2
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec--C--CHHHHHHHHHHhCC-CCceEEEeeCCchHHHHcCCc
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV--N--DPYVMNGWAEKLQA-KDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~--d--~~~~~~~~~~~~~l-~~~fpllsD~~~~v~~~yGv~ 155 (203)
..|-..+||.|.+. . ..++++|+. +-.+.. + +...+++|.++.|+ + ..=+.+..+...+.+++.
T Consensus 8 ~iY~~p~C~~c~ka-~-------~~L~~~gi~-~~~~di~~~~~~~~eL~~~l~~~g~~~--~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 8 TIYHNPRCSKSRET-L-------ALVEQQGIT-PQVVLYLETPPSVDKLKELLQQLGFSD--ARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp EEECCTTCHHHHHH-H-------HHHHTTTCC-CEEECTTTSCCCHHHHHHHHHHTTCSS--GGGGBCTTSHHHHHTTTT
T ss_pred EEEECCCCHHHHHH-H-------HHHHHcCCC-cEEEeeccCCCcHHHHHHHHHhcCCcC--HHHHhcCCChhhhhcCcc
Confidence 45778899999765 2 334567877 555544 2 34678899999987 5 433557788888888875
Q ss_pred c
Q 028808 156 K 156 (203)
Q Consensus 156 ~ 156 (203)
.
T Consensus 77 ~ 77 (121)
T 3rdw_A 77 D 77 (121)
T ss_dssp C
T ss_pred c
Confidence 3
No 289
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=74.01 E-value=3.3 Score=30.26 Aligned_cols=64 Identities=5% Similarity=-0.038 Sum_probs=30.7
Q ss_pred cccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCc-EEEEEecC-CHHHHHHHHH-HhCCCCceEEEe
Q 028808 71 DIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGID-SVICVAVN-DPYVMNGWAE-KLQAKDVIEFYG 142 (203)
Q Consensus 71 dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~-~vi~IS~d-~~~~~~~~~~-~~~l~~~fplls 142 (203)
++.+-.+|+| |..+|||.|..- ..+ .++....|+. .++=|..+ +....++..+ ..|.. .+|.+.
T Consensus 9 ~ii~~~~Vvv--ysk~~Cp~C~~a--k~l---L~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~-tVP~If 75 (127)
T 3l4n_A 9 LILDLSPIII--FSKSTCSYSKGM--KEL---LENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRG-TVPNLL 75 (127)
T ss_dssp HHHTSCSEEE--EECTTCHHHHHH--HHH---HHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCC-SSCEEE
T ss_pred HHHccCCEEE--EEcCCCccHHHH--HHH---HHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCC-CcceEE
Confidence 3334344443 678999999753 222 2221112343 03344433 3344555444 34654 466665
No 290
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=73.50 E-value=21 Score=31.58 Aligned_cols=96 Identities=16% Similarity=0.147 Sum_probs=59.9
Q ss_pred cccCCCccccCCCceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHH-HHHHcCCc
Q 028808 34 SVAVGSDIVSAAQDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNID-KFKAKGID 112 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~-~f~~~gv~ 112 (203)
...+|.. ||+.-|.. +| +.+++-|++....++ +.+.. . ....+... -.++.|+.
T Consensus 419 ~~~pG~r----~p~~~l~~-~~---------~~~~~~dl~g~~f~l-l~~~~------~----~~~~~~~~~~~~~~~~~ 473 (535)
T 3ihg_A 419 SGRPGFR----GPHVLVSR-HG---------ERLSTVDLFGDGWTL-LAGEL------G----ADWVAAAEAVSAELGVP 473 (535)
T ss_dssp CCCTTSB----CCCCEEEE-TT---------EEEEGGGGCSSSEEE-EECTT------C----HHHHHHHHHHHHHHTCC
T ss_pred CCCCCCc----CCCceeec-CC---------ceeeHHHhcCCceEE-EecCC------c----cHHHHHHHHHHHhcCCc
Confidence 4678888 69998843 23 789999987444444 43321 1 11222222 22345665
Q ss_pred EEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEee
Q 028808 113 SVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVE 185 (203)
Q Consensus 113 ~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~ 185 (203)
+-.+..... +.|.++.+++.||+... ..+||. ||-|-++...
T Consensus 474 -~~~~~~~~~------------------~~d~~~~~~~~~~~~~~------------~~~lvRPD~~va~r~~~ 516 (535)
T 3ihg_A 474 -VRAYRVGAG------------------LTDPESAVSERYGIGKA------------GASLVRPDGIVAWRTDE 516 (535)
T ss_dssp -EEEEEBTTT------------------BBCSSCCHHHHHTCTTT------------CEEEECTTSBEEEEESS
T ss_pred -eEEEEeCCc------------------cccCcchHHHHhCCCCC------------ceEeeCCCceeEEecCC
Confidence 545544321 34888999999998642 278999 9999999754
No 291
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=71.74 E-value=1.9 Score=30.66 Aligned_cols=61 Identities=8% Similarity=-0.027 Sum_probs=39.6
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCC
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN----DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDL 154 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d----~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv 154 (203)
..|-..+||.|.+- ...++++|+. +-.+..+ +....++|.++.|+. -+.+..+...+.+|.
T Consensus 3 ~iY~~~~C~~C~ka--------k~~L~~~gi~-~~~~di~~~~~~~~~l~~~~~~~g~~----~l~n~~~~~~k~l~~ 67 (114)
T 1rw1_A 3 VLYGIKACDTMKKA--------RTWLDEHKVA-YDFHDYKAVGIDREHLRRWCAEHGWQ----TVLNRAGTTFRKLDE 67 (114)
T ss_dssp EEEECSSCHHHHHH--------HHHHHHTTCC-EEEEEHHHHCCCHHHHHHHHHHHCHH----HHBCTTSHHHHTSCH
T ss_pred EEEECCCChHHHHH--------HHHHHHCCCc-eEEEeecCCCCCHHHHHHHHHhCChH----HhccCCcHhHHhcCc
Confidence 35778899999754 2334567888 6666553 236778898888742 133556666666664
No 292
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=71.66 E-value=7 Score=35.87 Aligned_cols=123 Identities=9% Similarity=0.071 Sum_probs=67.1
Q ss_pred ccCCCccccCCCceEEecc-ccccCCCCCCceeeecccccC--CCeEEEEEeeCCCCCCCC-ccchhhHHHhH-------
Q 028808 35 VAVGSDIVSAAQDVSLQKA-RTWDEGVSSNFATTPIKDIFK--GKKVVIFGLPGAYTGVCS-NQHVPSYKNNI------- 103 (203)
Q Consensus 35 ~~~G~~~~~~APdf~l~~~-~g~~~G~~~~~~~vsL~dl~~--gk~vVL~~f~~~~cp~C~-~ehl~~l~~~~------- 103 (203)
+.+|.. +|++.+... +| +.++|.++++ |++++|+ |.+.-.+.+. .. +..+.+..
T Consensus 467 ~~~G~r----~p~~~~~~~~~g---------~~~~l~~~~~~~g~~~ll~-~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 531 (639)
T 2dkh_A 467 FTVGMR----FHSAPVVRVCDA---------KPVQLGHCGKADGRWRLYA-FAAQNDLAQPESG-LLALCRFLEGDAASP 531 (639)
T ss_dssp SCTTSB----CCCCEEEETTTC---------CEEEGGGGCCSSSCEEEEE-ECCTTTTTCTTSH-HHHHHHHHHHCTTCH
T ss_pred CCCcCC----CCCCeEEecCCC---------CEEEHHHhhccCCCEEEEE-ecCCCCchhhHHH-HHHHHHHHhhCCccH
Confidence 568999 599998754 43 7889999874 5766555 5554444443 22 33333322
Q ss_pred -HHHHHc-----C-CcEEEEEecCC---------HHHHHHHHHHhCC-CCceEEEeeC---C-chHHHHcCCcccccccc
Q 028808 104 -DKFKAK-----G-IDSVICVAVND---------PYVMNGWAEKLQA-KDVIEFYGDF---D-GSFHKSLDLGKDLSAAL 162 (203)
Q Consensus 104 -~~f~~~-----g-v~~vi~IS~d~---------~~~~~~~~~~~~l-~~~fpllsD~---~-~~v~~~yGv~~~~~~~g 162 (203)
..|... + ++ ++.|...+ |...+.+..++++ . .-.++.|. + +.+.+.||+...
T Consensus 532 ~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~g~~~~----- 604 (639)
T 2dkh_A 532 LRRFTPAGQDIDSIFD-LRAVFPQAYTEVALETLPALLLPPKGQLGMID-YEKVFSPDLKNAGQDIFELRGIDRQ----- 604 (639)
T ss_dssp HHHHSCTTSCTTSSEE-EEEECSSCGGGCCGGGSCGGGSCEETTTTEEC-CCSEEECCCSSTTCCHHHHTTBCTT-----
T ss_pred HHhcCCCCCCcCceEE-EEEEecCCCCccchhhCcHhhCCccccccccc-ceeEEeCCCcccccchHHHhCCCCC-----
Confidence 123211 1 34 66664332 1112222223332 1 12456673 2 668888997431
Q ss_pred CCCCcceEEEEEe-CCEEEEEEe
Q 028808 163 LGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 163 ~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
.-+.+||. ||-|-++.-
T Consensus 605 -----~g~~v~vRPD~yv~~~~~ 622 (639)
T 2dkh_A 605 -----QGALVVVRPDQYVAQVLP 622 (639)
T ss_dssp -----TCEEEEECTTSBEEEEEC
T ss_pred -----ceEEEEECCCCceEEeec
Confidence 12468889 999988753
No 293
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=70.32 E-value=6.9 Score=30.69 Aligned_cols=41 Identities=15% Similarity=0.209 Sum_probs=24.2
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN 120 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d 120 (203)
+.++++|-..||+.|..- ++.|++.+++|+.+ +. ++.+..+
T Consensus 132 ~~~~l~f~~~~~~~~~~~-~~~~~~vAk~~k~~-i~-F~~vd~~ 172 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEEN-MHRYQKAAKLFQGK-IL-FILVDSG 172 (227)
T ss_dssp CEEEEEEECTTSTTHHHH-HHHHHHHHHHTTTT-CE-EEEEETT
T ss_pred ceEEEEEEcCCcchHHHH-HHHHHHHHHHhhCC-EE-EEEeCCc
Confidence 444455555677777655 67777777777654 44 4444443
No 294
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=69.98 E-value=2.5 Score=23.01 Aligned_cols=21 Identities=14% Similarity=0.134 Sum_probs=16.8
Q ss_pred CCCCCCccchhhHHHhHHHHHH
Q 028808 87 YTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 87 ~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
-||.|..+ +|....+..=|++
T Consensus 5 ~CpvCk~q-~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQ-APDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCE-ESSHHHHHHHHHH
T ss_pred cCcccccc-CcChHHHHHHHHH
Confidence 49999999 9999887665554
No 295
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=69.35 E-value=12 Score=34.53 Aligned_cols=121 Identities=16% Similarity=0.146 Sum_probs=64.9
Q ss_pred cccCCCccccCCCceEEecc-ccccCCCCCCceeeecccccC--CCeEEEEEeeCCCC-CCCCccchhhHHHhHHHHH--
Q 028808 34 SVAVGSDIVSAAQDVSLQKA-RTWDEGVSSNFATTPIKDIFK--GKKVVIFGLPGAYT-GVCSNQHVPSYKNNIDKFK-- 107 (203)
Q Consensus 34 ~~~~G~~~~~~APdf~l~~~-~g~~~G~~~~~~~vsL~dl~~--gk~vVL~~f~~~~c-p~C~~ehl~~l~~~~~~f~-- 107 (203)
.+.+|.. +|++.+... +| ++++|.+++. |++++|+ |.+.-. +.+ ...+.++.+.+.
T Consensus 478 ~~~~G~r----~p~~~~~~~~~g---------~~~~l~~~l~~~g~~~ll~-~~~~~~~~~~----~~~~~~~~~~l~~~ 539 (665)
T 1pn0_A 478 NCVVGTR----FKSQPVVRHSEG---------LWMHFGDRLVTDGRFRIIV-FAGKATDATQ----MSRIKKFAAYLDSE 539 (665)
T ss_dssp TSCTTSB----CCCCEEEETTTT---------EEEEGGGGCCCSSCEEEEE-EEECTTSHHH----HHHHHHHHHHHHST
T ss_pred CCCCcCC----CCCCeEEecCCC---------cEEEHhHhhccCCCEEEEE-ecCCcccchh----HHHHHHHHHHhhcc
Confidence 3578999 599999754 43 7899999874 5766665 544321 112 233444444332
Q ss_pred --------Hc------CCcEEEEEecCCHHH--HHHHHH---HhCCCCceEEEee------CCchHHHHcCCcccccccc
Q 028808 108 --------AK------GIDSVICVAVNDPYV--MNGWAE---KLQAKDVIEFYGD------FDGSFHKSLDLGKDLSAAL 162 (203)
Q Consensus 108 --------~~------gv~~vi~IS~d~~~~--~~~~~~---~~~l~~~fpllsD------~~~~v~~~yGv~~~~~~~g 162 (203)
.. -++ ++.|....... ...+-+ .-+.. .-.++.| .++.+.+.||+...
T Consensus 540 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~g~~~~----- 612 (665)
T 1pn0_A 540 NSVISRYTPKGADRNSRID-VITIHSCHRDDIEMHDFPAPALHPKWQ-YDFIYADCDSWHHPHPKSYQAWGVDET----- 612 (665)
T ss_dssp TSHHHHHSBTTSCTTSSEE-EEEEESSCTTSCCGGGSCTTTTSCTTC-CSSEEECSCCSSSCCCCHHHHHTBCTT-----
T ss_pred ccHHhhcCCcccCccceeE-EEEEecCCCCccchhhCCHHHcCcccc-hheEeecCcccccccccHHHHcCCCCC-----
Confidence 11 145 66663322100 000000 00111 0235667 35678899998531
Q ss_pred CCCCcceEEEEEe-CCEEEEEEe
Q 028808 163 LGPRSERWSAYVE-DGRIKALNV 184 (203)
Q Consensus 163 ~~~~~~r~tfIId-dG~I~~~~~ 184 (203)
.-+.+||. ||-|-++.-
T Consensus 613 -----~g~~vlvRPD~yV~~~~~ 630 (665)
T 1pn0_A 613 -----KGAVVVVRPDGYTSLVTD 630 (665)
T ss_dssp -----TCEEEEECTTSBEEEEEC
T ss_pred -----CceEEEECCCCcEEEEec
Confidence 12368889 999988754
No 296
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=67.65 E-value=13 Score=26.92 Aligned_cols=56 Identities=13% Similarity=0.144 Sum_probs=39.2
Q ss_pred cccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 71 DIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 71 dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
++|+|.++| +.+-.-- + -.++.++.+.+++.|+. +|||....+..+++++.+.|++
T Consensus 43 ~FF~~aPVV-lDl~~l~------~-~~dl~~L~~~l~~~gl~-~vGV~g~~~~~~~~~a~~~GLp 98 (120)
T 3ghf_A 43 AFLKHAPVV-INVSGLE------S-PVNWPELHKIVTSTGLR-IIGVSGCKDASLKVEIDRMGLP 98 (120)
T ss_dssp HHHTTCEEE-EEEEECC------S-SCCHHHHHHHHHTTTCE-EEEEESCCCHHHHHHHHHHTCC
T ss_pred HhhCCCcEE-EEccccC------C-hHHHHHHHHHHHHcCCE-EEEEeCCCcHHHHHHHHHCCCC
Confidence 456888654 4443221 1 13467777888999998 9999986666678899999874
No 297
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=66.26 E-value=9.5 Score=27.25 Aligned_cols=60 Identities=22% Similarity=0.289 Sum_probs=28.2
Q ss_pred cCCCeEEEEEeeC----CCCCCCCccchhhHHHhHHHHHHcCCc--EEEEEecC-CHHHHHHHHHHhCCCCceEEEe
Q 028808 73 FKGKKVVIFGLPG----AYTGVCSNQHVPSYKNNIDKFKAKGID--SVICVAVN-DPYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 73 ~~gk~vVL~~f~~----~~cp~C~~ehl~~l~~~~~~f~~~gv~--~vi~IS~d-~~~~~~~~~~~~~l~~~fplls 142 (203)
.+..+|||+ --+ .|||+|..- ..+ |+++|+. .+.-+..+ ++.......+..|.. .+|.+.
T Consensus 13 i~~~~Vvvf-sk~t~~~p~Cp~C~~a--k~l------L~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~-tvP~vf 79 (121)
T 3gx8_A 13 IESAPVVLF-MKGTPEFPKCGFSRAT--IGL------LGNQGVDPAKFAAYNVLEDPELREGIKEFSEWP-TIPQLY 79 (121)
T ss_dssp HHSCSEEEE-ESBCSSSBCTTHHHHH--HHH------HHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCC-SSCEEE
T ss_pred hccCCEEEE-EeccCCCCCCccHHHH--HHH------HHHcCCCcceEEEEEecCCHHHHHHHHHHhCCC-CCCeEE
Confidence 344445543 333 399999753 222 2233443 02234443 444444455555654 466554
No 298
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=65.55 E-value=31 Score=25.07 Aligned_cols=39 Identities=10% Similarity=0.127 Sum_probs=32.4
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. ++.+|..+....+...+.+++.
T Consensus 91 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGLE-IGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCG
T ss_pred CchHHHHHHHHHHCCCC-EEEEeCCcHHHHHHHHHHcCcH
Confidence 46677788888999998 9999988888888889988874
No 299
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=65.41 E-value=15 Score=31.72 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=35.3
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...++.+.+++.|++ |+.||-...+.++.|+++.|+.
T Consensus 223 ~p~~~eLi~~L~~~G~~-v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGID-CYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHCTTSS
T ss_pred CHHHHHHHHHHHHCCCe-EEEEcCCcHHHHHHHHHHhCcc
Confidence 58899999999999999 9999999888999999998863
No 300
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=64.19 E-value=2.7 Score=30.11 Aligned_cols=63 Identities=10% Similarity=0.015 Sum_probs=40.7
Q ss_pred EEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 80 IFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVN----DPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 80 L~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d----~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+..|-..+||.|.+- . ..++++|+. .-.+..+ +....++|.++.|+. -+.+..+...+.+|..
T Consensus 7 i~iY~~~~C~~C~ka-~-------~~L~~~gi~-y~~~di~~~~~~~~~l~~~~~~~g~~----~l~n~~~~~~k~l~~~ 73 (120)
T 2kok_A 7 VTIYGIKNCDTMKKA-R-------IWLEDHGID-YTFHDYKKEGLDAETLDRFLKTVPWE----QLLNRAGTTFRKLPED 73 (120)
T ss_dssp EEEEECSSCHHHHHH-H-------HHHHHHTCC-EEEEEHHHHCCCHHHHHHHHHHSCGG----GTBCSSSHHHHHSCHH
T ss_pred EEEEECCCChHHHHH-H-------HHHHHcCCc-EEEEeeeCCCCCHHHHHHHHHHcChH----hhccCCchhhHhcCch
Confidence 345778899999764 2 234456787 6556543 236778888888752 2346677777777753
No 301
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=63.84 E-value=38 Score=25.17 Aligned_cols=45 Identities=16% Similarity=0.207 Sum_probs=34.3
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCH---HHHHHHHHHhCCCCceEEE
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDP---YVMNGWAEKLQAKDVIEFY 141 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~---~~~~~~~~~~~l~~~fpll 141 (203)
.|...++.++++++|+. +..+|-.+. .......+..++...|..+
T Consensus 36 ~~g~~~~L~~L~~~g~~-~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i 83 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFK-QAILSNTATSDTEVIKRVLTNFGIIDYFDFI 83 (189)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHHTTCGGGEEEE
T ss_pred CcCHHHHHHHHHHCCCE-EEEEECCCccchHHHHHHHHhcCchhheEEE
Confidence 57888889999999998 888886544 6778888999985335444
No 302
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=59.97 E-value=4.7 Score=28.98 Aligned_cols=66 Identities=11% Similarity=0.092 Sum_probs=44.4
Q ss_pred EEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec----CCHHHHHHHHHHhCCCCceEEEeeCCchHHHHcCCcc
Q 028808 81 FGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV----NDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGK 156 (203)
Q Consensus 81 ~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~----d~~~~~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~~ 156 (203)
.+|-..+|+.|.+. . ..++++|+. +-.+.. -+...+++|.++.|++ ...-+.+..+...+.+++..
T Consensus 7 ~iY~~p~C~~c~ka-~-------~~L~~~gi~-~~~~di~~~~~t~~eL~~~l~~~g~~-~~~~l~n~~~~~~k~l~l~~ 76 (119)
T 3f0i_A 7 VIYHNPKCSKSRET-L-------ALLENQGIA-PQVIKYLETSPSVEELKRLYQQLGLN-EVRAMMRCKEELYKELNLGD 76 (119)
T ss_dssp EEECCTTCHHHHHH-H-------HHHHHTTCC-CEEECHHHHCCCHHHHHHHHHHHTCS-SGGGGBCTTSHHHHHTTTTC
T ss_pred EEEECCCChHHHHH-H-------HHHHHcCCc-eEEEEeccCcCcHHHHHHHHHHcCCc-cHHHHhcCCCchhhhcCccc
Confidence 45778899999765 2 334567776 555533 2456789999999863 13335577888888887754
No 303
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=59.96 E-value=42 Score=24.90 Aligned_cols=39 Identities=5% Similarity=0.024 Sum_probs=32.1
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.+...++.++++++|+. ++.+|..+....+...+..++.
T Consensus 93 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 93 LPGAVELLETLDKENLK-WCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp CTTHHHHHHHHHHTTCC-EEEECSSCHHHHHHHHHTTTCC
T ss_pred CCCHHHHHHHHHHCCCe-EEEEeCCchhhHHHHHHhcchh
Confidence 46677788888999998 9999888877788888888874
No 304
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=59.45 E-value=11 Score=26.96 Aligned_cols=66 Identities=21% Similarity=0.396 Sum_probs=43.5
Q ss_pred cCCCeEEEEEeeCCCCCCCCccchhh------HHHhHHHHHHc---CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEee
Q 028808 73 FKGKKVVIFGLPGAYTGVCSNQHVPS------YKNNIDKFKAK---GIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGD 143 (203)
Q Consensus 73 ~~gk~vVL~~f~~~~cp~C~~ehl~~------l~~~~~~f~~~---gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD 143 (203)
++|..+++-.+++.+|+-|-.+ +-. +.+...++..+ +.- ++..++++.++.|++
T Consensus 24 ~kg~~~~v~~v~~~~C~~CGE~-~~d~e~~~~~~~~~~e~~r~~~~~~~--------~~~~l~~~R~~~gls-------- 86 (133)
T 3o9x_A 24 FRGRKTVLKGIHGLYCVHCEES-IMNKEESDAFMAQVKAFRASVNAETV--------APEFIVKVRKKLSLT-------- 86 (133)
T ss_dssp ETTEEEEEEEEEEEEESSSSCE-ECCHHHHHHHHHHHHHHHHHHHTTTC--------CHHHHHHHHHHTTCC--------
T ss_pred ECCEEEEECCCceeECCCCCCE-eecHHHHHHHHHHHHHHHHHHhhcCC--------CHHHHHHHHHHcCCC--------
Confidence 4887656556799999999876 432 22222233211 221 466788899999986
Q ss_pred CCchHHHHcCCcc
Q 028808 144 FDGSFHKSLDLGK 156 (203)
Q Consensus 144 ~~~~v~~~yGv~~ 156 (203)
..++++.+|+..
T Consensus 87 -q~~la~~~g~s~ 98 (133)
T 3o9x_A 87 -QKEASEIFGGGV 98 (133)
T ss_dssp -HHHHHHHHCSCT
T ss_pred -HHHHHHHHCCCH
Confidence 678899988864
No 305
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=58.76 E-value=5.7 Score=26.33 Aligned_cols=36 Identities=28% Similarity=0.650 Sum_probs=24.7
Q ss_pred cCCCeEEEEEeeCCCCCCCCccc-----hhhHHHhHHHHHH
Q 028808 73 FKGKKVVIFGLPGAYTGVCSNQH-----VPSYKNNIDKFKA 108 (203)
Q Consensus 73 ~~gk~vVL~~f~~~~cp~C~~eh-----l~~l~~~~~~f~~ 108 (203)
++|+..+|=++|+.+|+.|-..- +..+.++..+|++
T Consensus 24 ~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 24 FRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp ETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 48887777789999999997651 3344455555543
No 306
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=57.29 E-value=35 Score=25.61 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=30.6
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...++.++++++|+. ++.+|..+....+...+..++.
T Consensus 106 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 144 (237)
T 4ex6_A 106 YPGVLEGLDRLSAAGFR-LAMATSKVEKAARAIAELTGLD 144 (237)
T ss_dssp CTTHHHHHHHHHHTTEE-EEEECSSCHHHHHHHHHHHTGG
T ss_pred CCCHHHHHHHHHhCCCc-EEEEcCCChHHHHHHHHHcCch
Confidence 46677778888888988 8888887777778888888763
No 307
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=56.88 E-value=48 Score=24.99 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. +..+|..+....+.+.+..++.
T Consensus 85 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 85 YPEIPYTLEALKSKGFK-LAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHcCCH
Confidence 47777888888899998 8888877777778888888874
No 308
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=56.79 E-value=26 Score=28.99 Aligned_cols=24 Identities=8% Similarity=0.030 Sum_probs=17.0
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHh
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNN 102 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~ 102 (203)
+.|..|...+||.|..- -.-|.++
T Consensus 44 ~~VelyTs~gCp~C~~A-k~lL~~~ 67 (270)
T 2axo_A 44 GVVELFTSQGCASCPPA-DEALRKM 67 (270)
T ss_dssp CEEEEEECTTCTTCHHH-HHHHHHH
T ss_pred cEEEEEeCCCCCChHHH-HHHHHHh
Confidence 66777999999999764 3333343
No 309
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=56.62 E-value=3.9 Score=31.56 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=29.4
Q ss_pred ecccccCCCeEEEEEeeCCCCCCCCccchhhH---HHhHHHHHHcCCcEEEEEec
Q 028808 68 PIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSY---KNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 68 sL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l---~~~~~~f~~~gv~~vi~IS~ 119 (203)
.|..-..++ +.|+-|..-+||+|..- -+.+ .++.+++.+ ++. ++-+..
T Consensus 14 ~l~~p~~~~-~~vvef~d~~Cp~C~~~-~~~l~~~~~l~~~~~~-~v~-~~~~~~ 64 (191)
T 3l9s_A 14 TLDKPVAGE-PQVLEFFSFYCPHCYQF-EEVLHVSDNVKKKLPE-GTK-MTKYHV 64 (191)
T ss_dssp ECSSCCCSS-SCEEEEECTTCHHHHHH-HHTSCHHHHHHHHSCT-TCC-EEEEEC
T ss_pred EcCCCCCCC-CeEEEEECCCChhHHHh-ChhccchHHHHHhCCC-CcE-EEEEec
Confidence 343323455 45667889999999876 3654 355555543 466 665543
No 310
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=56.44 E-value=29 Score=26.01 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=31.4
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...++.++++++|+. ++.+|..+......+.+..++.
T Consensus 105 ~~~~~~~l~~l~~~g~~-~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 105 NDGAIELLDTLKENNIT-MAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHTTCG
T ss_pred CcCHHHHHHHHHHCCCe-EEEEECCCHHHHHHHHHHCCch
Confidence 46677778888999998 8888877777788888888874
No 311
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=56.34 E-value=7.6 Score=28.01 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=24.1
Q ss_pred cccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHH
Q 028808 69 IKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKF 106 (203)
Q Consensus 69 L~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f 106 (203)
+.++.+...++++.|+.+||..|. +.|.+.++.+
T Consensus 32 ~e~fi~~~~v~VVGfF~~~~~~~~----~~F~~~A~~~ 65 (124)
T 2l4c_A 32 AMEFIAATEVAVIGFFQDLEIPAV----PILHSMVQKF 65 (124)
T ss_dssp HHHHHHTSSEEEEEECSCTTSTHH----HHHHHHHHHC
T ss_pred HHHHHhcCCCEEEEEECCCCChhH----HHHHHHHHhC
Confidence 344334455888899999998883 5577777776
No 312
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=54.99 E-value=55 Score=23.35 Aligned_cols=37 Identities=14% Similarity=0.114 Sum_probs=29.3
Q ss_pred hHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 98 SYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 98 ~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
...+..++++++|+. ++.+|..+....+.+.+++++.
T Consensus 40 ~~~~~l~~l~~~g~~-~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 40 LDGIGIKLLQKMGIT-LAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHHHHTTTCE-EEEEESCCCHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHCCCE-EEEEeCCCcHHHHHHHHHcCCH
Confidence 345667778888998 8888887777788888988875
No 313
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=54.42 E-value=60 Score=24.10 Aligned_cols=39 Identities=8% Similarity=0.163 Sum_probs=31.6
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..+.++++|+. ++.+|..+........+..++.
T Consensus 101 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 101 FPENVPVLRQLREMGLP-LGILSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp CTTHHHHHHHHHTTTCC-EEEEESSCHHHHHHHHHTTTCT
T ss_pred CCCHHHHHHHHHhCCCc-EEEEeCCCHHHHHHHHHHCCcH
Confidence 46777788888999998 9888888877777888888874
No 314
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=54.07 E-value=35 Score=25.80 Aligned_cols=59 Identities=7% Similarity=0.038 Sum_probs=41.5
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCC--ceEEEeeCCc----------hHHHHcCCc
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKD--VIEFYGDFDG----------SFHKSLDLG 155 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~--~fpllsD~~~----------~v~~~yGv~ 155 (203)
.|...+..++++++|+. ++.+|.......+.+.+..++.. ...+.+|..+ .+.+.+|+.
T Consensus 112 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~ 182 (240)
T 3sd7_A 112 YENMKEILEMLYKNGKI-LLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVK 182 (240)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHCCCe-EEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence 46677778888999998 88888877777888888888742 2344445322 356777775
No 315
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=52.55 E-value=34 Score=25.39 Aligned_cols=60 Identities=10% Similarity=0.074 Sum_probs=41.4
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCC--ceEEEeeCC----------chHHHHcCCcc
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKD--VIEFYGDFD----------GSFHKSLDLGK 156 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~--~fpllsD~~----------~~v~~~yGv~~ 156 (203)
.|...+..++++++|+. +..+|...........+..++.. ...+.+|.. ..+++.+|+..
T Consensus 88 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 159 (226)
T 3mc1_A 88 YDGIEALLSSLKDYGFH-LVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKS 159 (226)
T ss_dssp CTTHHHHHHHHHHHTCE-EEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCG
T ss_pred CcCHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCc
Confidence 46777888888999998 88888777777788888888742 234444432 23566777753
No 316
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=52.54 E-value=3.7 Score=30.96 Aligned_cols=39 Identities=8% Similarity=-0.024 Sum_probs=25.3
Q ss_pred EEEEEeeCCCCCCCCccchhhH-HHhHHHHHHcCCcEEEEEec
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSY-KNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l-~~~~~~f~~~gv~~vi~IS~ 119 (203)
++++.|+.-.||.|..- .+.+ .++.+++.. .++ +.-+..
T Consensus 19 ~~~ief~d~~CP~C~~~-~~~l~~~l~~~~~~-~v~-~~~~~l 58 (195)
T 3c7m_A 19 KTLIKVFSYACPFCYKY-DKAVTGPVSEKVKD-IVA-FTPFHL 58 (195)
T ss_dssp TEEEEEECTTCHHHHHH-HHHTHHHHHHHTTT-TCE-EEEEEC
T ss_pred cEEEEEEeCcCcchhhC-cHHHHHHHHHhCCC-ceE-EEEEec
Confidence 34445677999999876 5777 666665543 355 665553
No 317
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=51.13 E-value=5.8 Score=33.09 Aligned_cols=39 Identities=5% Similarity=0.314 Sum_probs=25.9
Q ss_pred CCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEec
Q 028808 75 GKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 75 gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~ 119 (203)
|+ .+|+.|.-..||+|.+. .+++.+..+ +-.+. ++.+-.
T Consensus 147 gk-~~I~vFtDp~CPYCkkl-~~~l~~~l~---~~~Vr-~i~~Pi 185 (273)
T 3tdg_A 147 KD-KILYIVSDPMCPHCQKE-LTKLRDHLK---ENTVR-MVVVGW 185 (273)
T ss_dssp TT-CEEEEEECTTCHHHHHH-HHTHHHHHH---HCEEE-EEECCC
T ss_pred CC-eEEEEEECcCChhHHHH-HHHHHHHhh---CCcEE-EEEeec
Confidence 44 45667889999999988 577776543 34454 555443
No 318
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=50.11 E-value=18 Score=29.82 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=38.0
Q ss_pred CCCeEEEEEeeCCCCCCCCccc-hhhHHHhHHHHHHc-CCcEEEEEecCCHHHHHHHHHHhCC
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQH-VPSYKNNIDKFKAK-GIDSVICVAVNDPYVMNGWAEKLQA 134 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~eh-l~~l~~~~~~f~~~-gv~~vi~IS~d~~~~~~~~~~~~~l 134 (203)
+|.++.+-..|++.|+...... ...-.+.+.++.+. |++ +|.+|.|....+|.++.++
T Consensus 217 ~g~~v~~nTlw~~~~~g~~d~~a~~d~~~~~~~l~~~~Gvd---~I~TD~P~~l~~yL~~~~~ 276 (278)
T 3i10_A 217 KKSLIWYNTLWGSLAGNHDDNLALTDPEKSYGYLIEQLGAR---ILQTDQPAYLLDYLRKKGW 276 (278)
T ss_dssp TTSEEEEECSSGGGBTTCCHHHHHHCHHHHHHHHHHTTCEE---EEEESCHHHHHHHHHHHTS
T ss_pred CCCEEEEEecccccccCccchhhccChHHHHHHHHhcCCCC---EEEeCCHHHHHHHHhhccc
Confidence 4554433333666665544330 11223457888888 988 8999999999999998876
No 319
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=49.85 E-value=74 Score=23.36 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=29.4
Q ss_pred HHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 99 YKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 99 l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
-.+..++++++|+. ++.+|-+.....+...++.++.
T Consensus 40 ~~~~l~~L~~~G~~-~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 40 DGLGIKMLMDADIQ-VAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHHHTTCE-EEEEESCCCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHCCCe-EEEEeCCCcHHHHHHHHHcCCc
Confidence 34567778889998 9888888877888899999985
No 320
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=47.09 E-value=44 Score=24.68 Aligned_cols=46 Identities=9% Similarity=0.054 Sum_probs=34.8
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCC---HHHHHHHHHHhCCCCceEEEeeC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVND---PYVMNGWAEKLQAKDVIEFYGDF 144 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~---~~~~~~~~~~~~l~~~fpllsD~ 144 (203)
.|...+...+++++|.. |+..|-.+ ......|.++++++ ++++...
T Consensus 26 ~~~~~~al~~l~~~G~~-iii~TgR~~~~~~~~~~~l~~~gi~--~~~I~~n 74 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHR-LILWSVREGELLDEAIEWCRARGLE--FYAANKD 74 (142)
T ss_dssp CTTHHHHHHHHHHTTCE-EEECCSCCHHHHHHHHHHHHTTTCC--CSEESSS
T ss_pred CHHHHHHHHHHHHCCCE-EEEEeCCCcccHHHHHHHHHHcCCC--eEEEEcC
Confidence 46667778888999987 77777655 45678899999997 7766653
No 321
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=46.98 E-value=71 Score=24.10 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=30.0
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..+.++++|+. +..+|..+........+..++.
T Consensus 96 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 96 VPGARKVLIRLKELGYE-LGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CTTHHHHHHHHHHHTCE-EEEEECSCHHHHHHHHHHTTCG
T ss_pred CccHHHHHHHHHHCCCE-EEEEECCCchhHHHHHHHcCcH
Confidence 46677777888888998 8888876666677788888874
No 322
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=46.32 E-value=4.7 Score=30.00 Aligned_cols=33 Identities=9% Similarity=0.106 Sum_probs=22.2
Q ss_pred eeecccccCCCeEEEEEeeCCCCCCCCccchhhHHH
Q 028808 66 TTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKN 101 (203)
Q Consensus 66 ~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~ 101 (203)
.+.+.. -.++ ++|+.|.-.+||+|.+- .+.+.+
T Consensus 6 ai~~~~-~~a~-~~vv~f~D~~Cp~C~~~-~~~l~~ 38 (147)
T 3gv1_A 6 AIKEVR-GNGK-LKVAVFSDPDCPFCKRL-EHEFEK 38 (147)
T ss_dssp SEEEEE-TTCC-EEEEEEECTTCHHHHHH-HHHHTT
T ss_pred Ceeeec-CCCC-EEEEEEECCCChhHHHH-HHHHhh
Confidence 344443 2455 67778899999999876 466554
No 323
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=43.42 E-value=8.9 Score=26.72 Aligned_cols=30 Identities=3% Similarity=-0.115 Sum_probs=20.7
Q ss_pred EEEEEeCCEEEEEEeecCCCCcccCCHHHH
Q 028808 170 WSAYVEDGRIKALNVEEAPSKMKVSGGDVI 199 (203)
Q Consensus 170 ~tfIIddG~I~~~~~~~~~~~~~~~~a~~v 199 (203)
..||+|.|..+|+|.+..-...++..|.++
T Consensus 30 d~FILd~g~~iyvW~G~~s~~~Ek~~A~~~ 59 (104)
T 1kcq_A 30 DCFILDLGNNIHQWCGSNSNRYERLKATQV 59 (104)
T ss_dssp SEEEEECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred CeEEEeCCCEEEEEeCCCCCHHHHHHHHHH
Confidence 489999777899999976443444444444
No 324
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=43.40 E-value=26 Score=31.49 Aligned_cols=39 Identities=5% Similarity=0.022 Sum_probs=30.9
Q ss_pred ceEEEeeCCchHHHHcCCccccccccCCCCcceEEEEEe-CCEEEEEEeec
Q 028808 137 VIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVE-DGRIKALNVEE 186 (203)
Q Consensus 137 ~fpllsD~~~~v~~~yGv~~~~~~~g~~~~~~r~tfIId-dG~I~~~~~~~ 186 (203)
.++...|.+..+++.||+.. .|+.++++ +|++....+..
T Consensus 186 ~v~~v~~~~~~l~~kfgV~~-----------~Pslvl~~~nGk~~~~~v~~ 225 (519)
T 3t58_A 186 AVRRVLNTESDLVNKFGVTD-----------FPSCYLLLRNGSVSRVPVLV 225 (519)
T ss_dssp EEEEEETTCHHHHHHHTCCC-----------SSEEEEEETTSCEEECCCSS
T ss_pred eEEEecCchHHHHHHcCCCC-----------CCeEEEEeCCCceeeccccc
Confidence 37888888899999999963 47788889 99988775543
No 325
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.62 E-value=32 Score=26.36 Aligned_cols=100 Identities=4% Similarity=-0.032 Sum_probs=54.0
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhH--HHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeCCchHH--
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSY--KNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFH-- 149 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l--~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~~~~v~-- 149 (203)
.+| .+++.+-.+||+.|..= .... .+...+|-+.++- +++.+.++.+....+....+-. + ...++
T Consensus 54 e~K-~LlVyLhs~~~~~~~~f-~~~~L~~~~V~~~l~~nfV-~w~~dv~~~e~~~~~~~~~~~~--~------g~~~a~~ 122 (178)
T 2ec4_A 54 DRK-LLAIYLHHDESVLTNVF-CSQMLCAESIVSYLSQNFI-TWAWDLTKDSNRARFLTMCNRH--F------GSVVAQT 122 (178)
T ss_dssp TCC-EEEEEEECSSCSHHHHH-HHHTTTCHHHHHHHHHTEE-EEEEECCSHHHHHHHHHHHHHH--T------CHHHHHH
T ss_pred hCc-EEEEEEeCCCCccHHHH-HHHhcCCHHHHHHHHcCEE-EEEEeCCCchhhhhhhhhhhhh--h------HHHHHHH
Confidence 455 67888999999988632 1111 1112222233565 7788888876544444333210 0 11233
Q ss_pred -HHcCCccccccccCCCCcceEEEEEe-C---CEEEEEEeecCCCCcccCCHHHHHhc
Q 028808 150 -KSLDLGKDLSAALLGPRSERWSAYVE-D---GRIKALNVEEAPSKMKVSGGDVILGQ 202 (203)
Q Consensus 150 -~~yGv~~~~~~~g~~~~~~r~tfIId-d---G~I~~~~~~~~~~~~~~~~a~~vL~~ 202 (203)
+.|++. ..|+..||+ + ++|+.+..|. .+++++++.
T Consensus 123 ~~~~~~~-----------~~P~l~ii~~~~~~~~vl~~~~G~-------~~~~~ll~~ 162 (178)
T 2ec4_A 123 IRTQKTD-----------QFPLFLIIMGKRSSNEVLNVIQGN-------TTVDELMMR 162 (178)
T ss_dssp HHHSCST-----------TCSEEEEECCCSSCCCEEEEECSC-------CCHHHHHHH
T ss_pred HhhcCCC-----------CCCeEEEEEcCCCceEEEEEEeCC-------CCHHHHHHH
Confidence 335553 347777886 4 3667776542 356666654
No 326
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=42.13 E-value=43 Score=25.16 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=33.4
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...++.++++++|+. ++.+|.......+.+.+.+++.
T Consensus 94 ~~g~~~~l~~l~~~g~~-~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDL-CALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHcCCC
Confidence 47788888899999998 8888888878888999999984
No 327
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=41.48 E-value=19 Score=30.42 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=32.3
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHh
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKL 132 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~ 132 (203)
.|...++.+.+++.|++ |+.||....+.++.|++..
T Consensus 145 ~~~~~~l~~~l~~~G~~-v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 145 FSGQRELYNKLMENGIE-VYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHTCG
T ss_pred CHHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhhc
Confidence 47788999999999999 9999998889999999874
No 328
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=39.38 E-value=6.5 Score=29.08 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=21.8
Q ss_pred CCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHH
Q 028808 74 KGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 74 ~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~ 108 (203)
.++++|+ -|..-.||.|..- -+.+.++.+++.+
T Consensus 20 ~~~~~vv-Ef~dy~Cp~C~~~-~~~~~~l~~~~~~ 52 (184)
T 4dvc_A 20 SSSPVVS-EFFSFYCPHCNTF-EPIIAQLKQQLPE 52 (184)
T ss_dssp CSSCEEE-EEECTTCHHHHHH-HHHHHHHHHTSCT
T ss_pred CCCCEEE-EEECCCCHhHHHH-hHHHHHHHhhcCC
Confidence 3565554 4556899999876 3667666666544
No 329
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=38.82 E-value=19 Score=32.47 Aligned_cols=50 Identities=6% Similarity=0.055 Sum_probs=27.5
Q ss_pred eeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCC----HHHHHHHHHHhCCCCceEEEe
Q 028808 83 LPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVND----PYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 83 f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~----~~~~~~~~~~~~l~~~fplls 142 (203)
|-.+|||.|..- ..+ ++++|+. .--+..+. ....+++.+..+.. .+|.+.
T Consensus 23 y~~~~Cp~C~~~--k~~------L~~~~i~-~~~~dv~~~~~~~~~~~~l~~~~g~~-tvP~v~ 76 (598)
T 2x8g_A 23 FSKTTCPYCKKV--KDV------LAEAKIK-HATIELDQLSNGSAIQKCLASFSKIE-TVPQMF 76 (598)
T ss_dssp EECTTCHHHHHH--HHH------HHHTTCC-CEEEEGGGSTTHHHHHHHTHHHHSCC-CSCEEE
T ss_pred EECCCChhHHHH--HHH------HHHCCCC-cEEEEcccCcchHHHHHHHHHHhCCc-eeCEEE
Confidence 678899999742 322 2345565 44455432 33344455455654 576664
No 330
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=38.80 E-value=14 Score=20.87 Aligned_cols=20 Identities=15% Similarity=0.283 Sum_probs=14.7
Q ss_pred CCCCCccchhhHHHhHHHHHH
Q 028808 88 TGVCSNQHVPSYKNNIDKFKA 108 (203)
Q Consensus 88 cp~C~~ehl~~l~~~~~~f~~ 108 (203)
||.|.++ +.....+..=|++
T Consensus 8 CP~C~~~-l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKS-LGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCE-ESSHHHHHHHHHH
T ss_pred CcHHHHH-cCCHHHHHHHHHh
Confidence 9999998 7777666555543
No 331
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=38.11 E-value=69 Score=22.68 Aligned_cols=39 Identities=18% Similarity=0.217 Sum_probs=28.5
Q ss_pred EEEEeeCCCCC--CCC----ccchhhHHHhHHHHHHcCCcEEEEEec
Q 028808 79 VIFGLPGAYTG--VCS----NQHVPSYKNNIDKFKAKGIDSVICVAV 119 (203)
Q Consensus 79 VL~~f~~~~cp--~C~----~ehl~~l~~~~~~f~~~gv~~vi~IS~ 119 (203)
+-+|=|+-.|+ +|- .| +-.|....+.++++|++ |-=.+.
T Consensus 7 i~ifepamCCstGvCG~~vd~e-L~~~~~~~~~lk~~Gi~-V~RyNL 51 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPE-LMRIAVVIESLKKQGII-VTRHNL 51 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHH-HHHHHHHHHHHHHTTCC-CEEEET
T ss_pred EEEechhhccCCCCcCCCCCHH-HHHHHHHHHHHHHCCCE-EEEEcc
Confidence 55677999887 453 34 67788888888999988 666654
No 332
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=37.11 E-value=25 Score=23.98 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=28.2
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQA 134 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l 134 (203)
.|...+..++++++|+. ++.+|..+....+...+..++
T Consensus 20 ~~~~~~~l~~L~~~G~~-~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVG-TVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHTTCE-EEEEECSCCGGGGHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHCCh
Confidence 46677888889999998 888887665555666666654
No 333
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=36.64 E-value=46 Score=23.81 Aligned_cols=63 Identities=24% Similarity=0.326 Sum_probs=29.8
Q ss_pred cccccCCCeEEEEEeeC----CCCCCCCccchhhHHHhHHHHHHcCC-cEEEEEecC-CHHHHHHHHHHhCCCCceEEEe
Q 028808 69 IKDIFKGKKVVIFGLPG----AYTGVCSNQHVPSYKNNIDKFKAKGI-DSVICVAVN-DPYVMNGWAEKLQAKDVIEFYG 142 (203)
Q Consensus 69 L~dl~~gk~vVL~~f~~----~~cp~C~~ehl~~l~~~~~~f~~~gv-~~vi~IS~d-~~~~~~~~~~~~~l~~~fplls 142 (203)
+.++.+..+|||| -=+ ..||+|.+- . +-|.++|+ . ...+..+ +++......+.-+.+ ++|-+.
T Consensus 13 i~~~i~~~~VvvF-~Kgt~~~P~C~fc~~a--k------~lL~~~gv~~-~~~~~v~~~~~~r~~l~~~sg~~-TvPqIF 81 (118)
T 2wul_A 13 LDALVKKDKVVVF-LKGTPEQPQCGFSNAV--V------QILRLHGVRD-YAAYNVLDDPELRQGIKDYSNWP-TIPQVY 81 (118)
T ss_dssp HHHHHHHSSEEEE-ESBCSSSBSSHHHHHH--H------HHHHHTTCCS-CEEEETTSCHHHHHHHHHHHTCC-SSCEEE
T ss_pred HHHHHhcCCEEEE-EcCCCCCCCCHHHHHH--H------HHHHHhCCcC-eEeecccCCHHHHHHHHHhccCC-CCCeEe
Confidence 4444444445553 333 257777542 2 22345666 3 4455544 444444444444554 465443
No 334
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=36.56 E-value=8.9 Score=20.32 Aligned_cols=11 Identities=27% Similarity=0.646 Sum_probs=8.7
Q ss_pred CCCCCCccchhh
Q 028808 87 YTGVCSNQHVPS 98 (203)
Q Consensus 87 ~cp~C~~ehl~~ 98 (203)
-||+|..- ||.
T Consensus 8 qcpvcqq~-mpa 18 (29)
T 3vhs_A 8 QCPVCQQM-MPA 18 (29)
T ss_dssp ECTTTCCE-EEG
T ss_pred eChHHHHh-CcH
Confidence 49999987 774
No 335
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=36.23 E-value=38 Score=25.44 Aligned_cols=39 Identities=13% Similarity=0.278 Sum_probs=32.9
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..+.++++|+. +..+|.......+.+.+++++.
T Consensus 88 ~~g~~~~l~~L~~~g~~-~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 88 TPGIRELVSRLQERNVQ-VFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHCCCc-EEEEeCChHHHHHHHHHHcCCC
Confidence 47778888889999998 9888887777788899999885
No 336
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=35.82 E-value=68 Score=24.78 Aligned_cols=38 Identities=18% Similarity=0.068 Sum_probs=31.2
Q ss_pred hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 97 PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 97 ~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
+...+...+++++|+. ++.+|-.+....+.+.++.++.
T Consensus 25 ~~~~~~l~~l~~~g~~-~~i~TGr~~~~~~~~~~~l~~~ 62 (227)
T 1l6r_A 25 TKAIESIRSAEKKGLT-VSLLSGNVIPVVYALKIFLGIN 62 (227)
T ss_dssp HHHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCE-EEEECCCCcHHHHHHHHHhCCC
Confidence 4566677888899998 8888888888888999998885
No 337
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=34.27 E-value=12 Score=28.56 Aligned_cols=38 Identities=3% Similarity=-0.097 Sum_probs=26.6
Q ss_pred eEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEE
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVIC 116 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~ 116 (203)
+++|+.|---.||.|.+- .+.+.+..+++..-.++ ++-
T Consensus 15 ~vtiv~f~D~~Cp~C~~~-~~~~~~~l~~~~~g~v~-~v~ 52 (182)
T 3gn3_A 15 PRLFEVFLEPTCPFSVKA-FFKLDDLLAQAGEDNVT-VRI 52 (182)
T ss_dssp SEEEEEEECTTCHHHHHH-HTTHHHHHHHHCTTTEE-EEE
T ss_pred CEEEEEEECCCCHhHHHH-HHHHHHHHHHhCCCCEE-EEE
Confidence 578888888999999986 57787776665111355 554
No 338
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=33.19 E-value=1.6e+02 Score=22.36 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=30.5
Q ss_pred hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 97 PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 97 ~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
+...+...+++++|+. ++.+|-.+......+.+..+++
T Consensus 23 ~~~~~al~~l~~~G~~-v~i~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 23 EKALEAIRRAESLGIP-IMLVTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp HHHHHHHHHHHHTTCC-EEEECSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCE-EEEEcCCChhHHHHHHHHcCCC
Confidence 5567777888899998 8888877777788888888875
No 339
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=33.17 E-value=1.2e+02 Score=22.83 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=31.0
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCC---------------HHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVND---------------PYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~---------------~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. ++.+|... ....+...+++++.
T Consensus 52 ~pg~~e~L~~L~~~G~~-~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFA-LVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCe-EEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 57788888999999998 88888777 35567778888875
No 340
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=32.11 E-value=69 Score=23.10 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=31.9
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. ++.+|..+........+..++.
T Consensus 86 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 86 NPGVREALEFVKSKRIK-LALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCG
T ss_pred CcCHHHHHHHHHHCCCC-EEEEeCCcHHhHHHHHHhcChH
Confidence 46677788888999998 8888888877788888888874
No 341
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.85 E-value=1.2e+02 Score=20.51 Aligned_cols=54 Identities=19% Similarity=0.124 Sum_probs=35.7
Q ss_pred HHHhHHHHHHcCCcEEEEEecCCHHH----HHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 99 YKNNIDKFKAKGIDSVICVAVNDPYV----MNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 99 l~~~~~~f~~~gv~~vi~IS~d~~~~----~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+++..+.++...+. ++.++.|.+.. ...+++.+++| +-.+.....+++++.|..
T Consensus 20 ~~~v~kai~~gka~-lViiA~D~~~~~~~~i~~~c~~~~ip--~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 20 SNETIRLAKTGGAK-LIIVAKNAPKEIKDDIYYYAKLSDIP--VYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHHHTCCS-EEEEECCCCHHHHHHHHHHHHHTTCC--EEEECCCSCGGGGTTCST
T ss_pred HHHHHHHHHcCCcc-EEEEeCCCCHHHHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHCCC
Confidence 34444555555677 99999987643 34456777775 544546778888888874
No 342
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=30.94 E-value=73 Score=23.33 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.+...++.++++++|+. ++.+|.......+.+.+..++.
T Consensus 72 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 110 (205)
T 3m9l_A 72 APGAVELVRELAGRGYR-LGILTRNARELAHVTLEAIGLA 110 (205)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCG
T ss_pred CccHHHHHHHHHhcCCe-EEEEeCCchHHHHHHHHHcCch
Confidence 35667778888899998 8888888877788888888874
No 343
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=30.85 E-value=71 Score=23.49 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=32.6
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecC---------------CHHHHHHHHHHhCCCCceEEE
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVN---------------DPYVMNGWAEKLQAKDVIEFY 141 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d---------------~~~~~~~~~~~~~l~~~fpll 141 (203)
.|...++.++++++|+. ++.+|.. ....+....+..++. |..+
T Consensus 44 ~pg~~e~L~~L~~~G~~-l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v 101 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYK-LVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEV 101 (176)
T ss_dssp CTTHHHHHHHHHHTTEE-EEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEE
T ss_pred CccHHHHHHHHHHCCCE-EEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEE
Confidence 57788888899999998 8888776 235567788888886 6543
No 344
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=30.72 E-value=15 Score=27.41 Aligned_cols=39 Identities=8% Similarity=0.034 Sum_probs=25.0
Q ss_pred eEEEEEeeCCCCCCCCccchhhHH-HhHHHHHHc-CCcEEEEE
Q 028808 77 KVVIFGLPGAYTGVCSNQHVPSYK-NNIDKFKAK-GIDSVICV 117 (203)
Q Consensus 77 ~vVL~~f~~~~cp~C~~ehl~~l~-~~~~~f~~~-gv~~vi~I 117 (203)
++.|+.|.--.||.|..- .+.+. ++.++|.+. +++ ++-.
T Consensus 12 ~~~i~~f~D~~Cp~C~~~-~~~l~~~l~~~~~~~~~v~-~~~~ 52 (186)
T 3bci_A 12 KPLVVVYGDYKCPYCKEL-DEKVMPKLRKNYIDNHKVE-YQFV 52 (186)
T ss_dssp CCEEEEEECTTCHHHHHH-HHHHHHHHHHHTTTTTSSE-EEEE
T ss_pred CeEEEEEECCCChhHHHH-HHHHHHHHHHHhccCCeEE-EEEE
Confidence 356677888999999876 46663 444556433 365 5543
No 345
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=29.63 E-value=1.4e+02 Score=25.85 Aligned_cols=51 Identities=20% Similarity=0.292 Sum_probs=36.8
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhC-CCCceEEEeeC--CchHH
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQ-AKDVIEFYGDF--DGSFH 149 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~-l~~~fpllsD~--~~~v~ 149 (203)
.....+...++.+.|++ +|=+++.+.+..+++.+=.. . +.|++.|. +..++
T Consensus 45 ~~atv~Qi~~l~~aG~d-iVRvavp~~~~a~al~~I~~~~--~vPlvaDiHf~~~la 98 (366)
T 3noy_A 45 VEATLNQIKRLYEAGCE-IVRVAVPHKEDVEALEEIVKKS--PMPVIADIHFAPSYA 98 (366)
T ss_dssp HHHHHHHHHHHHHTTCC-EEEEECCSHHHHHHHHHHHHHC--SSCEEEECCSCHHHH
T ss_pred HHHHHHHHHHHHHcCCC-EEEeCCCChHHHHHHHHHHhcC--CCCEEEeCCCCHHHH
Confidence 55667777888999999 99999988766555433222 4 48999994 66554
No 346
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=29.30 E-value=90 Score=22.94 Aligned_cols=39 Identities=5% Similarity=0.106 Sum_probs=31.7
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...++.++++++|+. ++.+|..+........+..++.
T Consensus 98 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 98 FADVPQALQQLRAAGLK-TAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHTCG
T ss_pred CCCHHHHHHHHHhCCCe-EEEEeCCCHHHHHHHHHHCCCh
Confidence 46777888888999998 8888888877778888888874
No 347
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=29.03 E-value=11 Score=26.76 Aligned_cols=30 Identities=7% Similarity=-0.107 Sum_probs=20.0
Q ss_pred EEEEEeCCEEEEEEeecCCCCcccCCHHHH
Q 028808 170 WSAYVEDGRIKALNVEEAPSKMKVSGGDVI 199 (203)
Q Consensus 170 ~tfIIddG~I~~~~~~~~~~~~~~~~a~~v 199 (203)
..||+|.|..+|+|.+..-...++..|.++
T Consensus 40 D~FILd~g~~iyvW~G~~ss~~Ek~~A~~~ 69 (114)
T 1svq_A 40 DCFLLDAGLTIYQFNGSKSSPQEKNKAAEV 69 (114)
T ss_dssp SEEEEEETTEEEECCCTTCCHHHHHHHHHH
T ss_pred CeEEEecCCEEEEEeCCCCCHHHHHHHHHH
Confidence 489999666789999876443344444443
No 348
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=28.77 E-value=1.6e+02 Score=25.74 Aligned_cols=38 Identities=8% Similarity=0.029 Sum_probs=31.7
Q ss_pred hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 97 PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 97 ~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
..|.++.++++++|.. ++.+.-+......++++++++.
T Consensus 92 ~sL~~L~~~L~~~G~~-L~v~~g~~~~~l~~l~~~~~~~ 129 (482)
T 2xry_A 92 KGLQELEVSLSRKKIP-SFFLRGDPGEKISRFVKDYNAG 129 (482)
T ss_dssp HHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCc-EEEEeCCHHHHHHHHHHHcCCC
Confidence 4677788889999999 8888777678899999999985
No 349
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=28.39 E-value=92 Score=23.36 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=30.8
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. +..+|.........+.+.+++.
T Consensus 107 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 107 YPDAAETLEKLKSAGYI-VAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHhcCcH
Confidence 36677778888889998 8888877777778888888874
No 350
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=28.26 E-value=99 Score=25.20 Aligned_cols=62 Identities=8% Similarity=0.090 Sum_probs=36.8
Q ss_pred CceEEeccccccCCCCCCceeeecccccCCCeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEe
Q 028808 46 QDVSLQKARTWDEGVSSNFATTPIKDIFKGKKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVA 118 (203)
Q Consensus 46 Pdf~l~~~~g~~~G~~~~~~~vsL~dl~~gk~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS 118 (203)
|.|..++..| +. .++-... ++|++|+++ .|-...+.-.. +..+.....-++..|++.||.++
T Consensus 58 p~fp~~tv~g----h~---~~~~~G~-l~G~~V~~~--~G~gh~~~~~~-v~~~~a~i~~l~~lGv~~iI~tg 119 (268)
T 1g2o_A 58 PGFVPPTAAG----HA---GELLSVP-IGAHRVLVL--AGRIHAYEGHD-LRYVVHPVRAARAAGAQIMVLTN 119 (268)
T ss_dssp TTCCCCCSTT----CC---CEEEEEE-ETTEEEEEE--ECCCCGGGTCC-HHHHSHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCCcccC----CC---CeEEEEE-ECCEEEEEE--ECCCcCCCCCC-HHHHHHHHHHHHHcCCCEEEEec
Confidence 6776655542 22 2566666 488876655 36654333223 45555556778889999666543
No 351
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=28.05 E-value=31 Score=26.09 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=27.1
Q ss_pred HHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 103 IDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 103 ~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.++++++|+. +..+|-++....+...++.++.
T Consensus 55 l~~L~~~g~~-~~ivTn~~~~~~~~~l~~lgl~ 86 (191)
T 3n1u_A 55 LKLLMAAGIQ-VAIITTAQNAVVDHRMEQLGIT 86 (191)
T ss_dssp HHHHHHTTCE-EEEECSCCSHHHHHHHHHHTCC
T ss_pred HHHHHHCCCe-EEEEeCcChHHHHHHHHHcCCc
Confidence 6778889998 9889888878888899999885
No 352
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=27.85 E-value=1.4e+02 Score=20.14 Aligned_cols=54 Identities=17% Similarity=0.065 Sum_probs=36.0
Q ss_pred HHHhHHHHHHcCCcEEEEEecCCHHH----HHHHHHHhCCCCceEEEeeCCchHHHHcCCc
Q 028808 99 YKNNIDKFKAKGIDSVICVAVNDPYV----MNGWAEKLQAKDVIEFYGDFDGSFHKSLDLG 155 (203)
Q Consensus 99 l~~~~~~f~~~gv~~vi~IS~d~~~~----~~~~~~~~~l~~~fpllsD~~~~v~~~yGv~ 155 (203)
+++....++...+. ++.++.|.+.. ...+++++++| +-.+.+...+++++.|..
T Consensus 21 ~~~v~kai~~gka~-lViiA~D~~~~~~~~l~~~c~~~~vp--~~~~~~s~~eLG~a~G~~ 78 (101)
T 1w41_A 21 ARKSIQYAKMGGAK-LIIVARNARPDIKEDIEYYARLSGIP--VYEFEGTSVELGTLLGRP 78 (101)
T ss_dssp HHHHHHHHHHTCCS-EEEEETTSCHHHHHHHHHHHHHHTCC--EEEESSCHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCc-EEEEeCCCCHHHHHHHHHHHHhcCCC--EEEecCCHHHHHHHhCCC
Confidence 33444555555577 99999987643 34557777775 544446778899998874
No 353
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=27.17 E-value=1.1e+02 Score=27.18 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=33.5
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEec------CCHHHHHHH------HHHhCCCCceEEEeeC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAV------NDPYVMNGW------AEKLQAKDVIEFYGDF 144 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~------d~~~~~~~~------~~~~~l~~~fpllsD~ 144 (203)
+.+|.++.+.-++.||+.+++||+ ++.+...+. ..+.|+. .|-++.|-
T Consensus 57 l~~l~eLv~~a~~~~V~Fv~aisPG~di~~s~~~d~~~L~~K~~ql~~lGVr-~FaIlfDD 116 (447)
T 2xsa_A 57 LARLTELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAGLR-NLVLLFDD 116 (447)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCCSSCCTTCHHHHHHHHHHHHHHHHTTCC-EEEEECSS
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHHHhCCC-EEEEeccC
Confidence 778888888888999998999998 233322222 3345665 68888875
No 354
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=27.10 E-value=1e+02 Score=22.85 Aligned_cols=39 Identities=8% Similarity=0.277 Sum_probs=29.9
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..+.++++|+. +..+|..+....+.+.+..++.
T Consensus 97 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 97 FSEVPDSLRELKRRGLK-LAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTTCG
T ss_pred CccHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHhcChH
Confidence 36667777888888988 8888777777777888888864
No 355
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=26.59 E-value=87 Score=23.89 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=31.0
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. +..+|..+....+.+.+++++.
T Consensus 116 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 116 YPNVKETLEALKAQGYI-LAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHCCCE-EEEEECCcHHHHHHHHHHcCch
Confidence 46677777888899998 8888877777778888888874
No 356
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=25.99 E-value=53 Score=24.19 Aligned_cols=39 Identities=15% Similarity=0.232 Sum_probs=32.5
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..+.++++|+. ++.+|.......+.+.+..++.
T Consensus 77 ~~~~~~~l~~l~~~g~~-~~i~S~~~~~~~~~~l~~~gl~ 115 (217)
T 3m1y_A 77 FEGALELVSALKEKNYK-VVCFSGGFDLATNHYRDLLHLD 115 (217)
T ss_dssp CBTHHHHHHHHHTTTEE-EEEEEEEEHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHCCCE-EEEEcCCchhHHHHHHHHcCcc
Confidence 46677888889999998 8888887777788899999885
No 357
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=25.90 E-value=92 Score=24.79 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=41.3
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceE-EEeeCCchHHHHcCCc
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIE-FYGDFDGSFHKSLDLG 155 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fp-llsD~~~~v~~~yGv~ 155 (203)
.|...+..++++++|+. +..+|.++........+..++...|. ++.+......+.+++.
T Consensus 165 ~~g~~~~l~~L~~~g~~-~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 165 KESAKPAVQELKRMGIK-VGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred chhHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 46777888889999998 88888888888888999999851121 1112334556667665
No 358
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=25.50 E-value=56 Score=27.01 Aligned_cols=24 Identities=4% Similarity=-0.184 Sum_probs=14.2
Q ss_pred eeCCCCCCCCccchhhHHHhHHHHH
Q 028808 83 LPGAYTGVCSNQHVPSYKNNIDKFK 107 (203)
Q Consensus 83 f~~~~cp~C~~ehl~~l~~~~~~f~ 107 (203)
|-..+|+.|..- ++.|++.+.+|+
T Consensus 252 f~~~~~~~~~~~-~~~~~~vA~~~~ 275 (350)
T 1sji_A 252 FAERSDPDGYEF-LEILKQVARDNT 275 (350)
T ss_dssp ECCTTSHHHHHH-HHHHHHHHHHGG
T ss_pred EEcCCCccHHHH-HHHHHHHHHHhC
Confidence 445566656544 566666666665
No 359
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=25.04 E-value=79 Score=22.88 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=31.6
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..+.++++|+. ++.+|.......+...+..++.
T Consensus 84 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 84 TDGIKELVQDLKNKGFE-IWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHHTCC
T ss_pred ChhHHHHHHHHHHCCCe-EEEEcCCcHHHHHHHHHHcCCC
Confidence 35667778888999998 8888887777788889999884
No 360
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=24.20 E-value=94 Score=22.81 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=27.4
Q ss_pred hHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 102 NIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 102 ~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
..++++++|+. +..+|.+.....+.+++++++.
T Consensus 47 ~l~~L~~~g~~-~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 47 GIAALRKSGLT-MLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp HHHHHHHTTCE-EEEEESSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCe-EEEEECcChHHHHHHHHHcCCe
Confidence 46778889998 8888888877888899999884
No 361
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=24.18 E-value=2e+02 Score=25.65 Aligned_cols=37 Identities=8% Similarity=0.077 Sum_probs=31.3
Q ss_pred hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 97 PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 97 ~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
..|.++.++++++|.. ++.+.-+.... .++++++++.
T Consensus 95 ~sL~dL~~~L~~lG~~-L~v~~G~p~~v-~~L~~~~~a~ 131 (506)
T 3umv_A 95 RGLRRLAADAAARHLP-FFLFTGGPAEI-PALVQRLGAS 131 (506)
T ss_dssp HHHHHHHHHHHHTTCC-EEEESSCTTHH-HHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCc-eEEEecChHHH-HHHHHhcCCC
Confidence 4577788899999999 99888777778 9999999985
No 362
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=24.09 E-value=2.2e+02 Score=22.22 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=38.1
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|++.+=|+-...-..- .+...+...+++++|+. ++..|--+......+.+..+++
T Consensus 23 li~~DlDGTLl~~~~~i-~~~~~~al~~l~~~G~~-v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 23 VVASDLDGTLLSPDHFL-TPYAKETLKLLTARGIN-FVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp EEEEECCCCCSCTTSCC-CHHHHHHHHHHHTTTCE-EEEECSSCGGGGHHHHHHHCSC
T ss_pred EEEEeCcCCCCCCCCcC-CHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHhcCCC
Confidence 55555555544322222 35677788889999997 7777766766778888888885
No 363
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=23.97 E-value=1.3e+02 Score=21.80 Aligned_cols=37 Identities=5% Similarity=0.075 Sum_probs=25.5
Q ss_pred hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 97 PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 97 ~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
|...+..++++++ +. +..+|..+....+.+.+..++.
T Consensus 86 ~~~~~~l~~l~~~-~~-~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 86 PGITSLFEQLPSE-LR-LGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp TTHHHHHHHSCTT-SE-EEEECSSCHHHHHHHHTTSGGG
T ss_pred CCHHHHHHHHHhc-Cc-EEEEeCCCHHHHHHHHHHcChH
Confidence 5566666667776 76 7777776666677777777763
No 364
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=23.62 E-value=77 Score=23.98 Aligned_cols=44 Identities=7% Similarity=0.018 Sum_probs=30.4
Q ss_pred CCCCCCccch------hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhC
Q 028808 87 YTGVCSNQHV------PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQ 133 (203)
Q Consensus 87 ~cp~C~~ehl------~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~ 133 (203)
.||.|-.+ + +-+..+.+..++.|.+ |..||.+..+ =.++.+.+|
T Consensus 105 ~c~~~g~~-~~~~e~~~~ve~L~e~~~~~G~~-v~ivs~~~ee-G~ql~~~fG 154 (166)
T 3ir9_A 105 NCPKCGSS-LEVTDVTDIVDEFSELADKSNAK-VVFVSTDFDE-GSQLMNAFG 154 (166)
T ss_dssp BCTTTCCB-EEEEEEEEHHHHHHHHHHHTTCE-EEEECSCSHH-HHHHHHTST
T ss_pred cccccCcc-chhhhHHHHHHHHHHHHHhcCCE-EEEECCCChh-HHHHHHcCC
Confidence 48998764 3 3355788888889998 9999887753 234545543
No 365
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=23.54 E-value=76 Score=24.11 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=47.0
Q ss_pred CeEEEEEeeCCCCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEeeC
Q 028808 76 KKVVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAKDVIEFYGDF 144 (203)
Q Consensus 76 k~vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~~~fpllsD~ 144 (203)
++=+|+-+-|-=.|-+... ....+++.+++-+.+-. ||||+..+.+....|.++.+ |.++.|.
T Consensus 84 ~~D~vVllGGLAMPk~~v~-~e~v~~li~ki~~~~~k-iiGvCFms~F~kagW~~~Id----FD~iID~ 146 (157)
T 2r47_A 84 NVDVLVLLGGLSMPGIGSD-IEDVKKLVEDALEEGGE-LMGLCYMDMFARAGWYELLD----FDCVINA 146 (157)
T ss_dssp CEEEEEEEGGGGSTTTSCC-HHHHHHHHHHHEEEEEE-EEEEEETTHHHHTTHHHHSC----CSEEEEE
T ss_pred CCCEEEEeccccCCCCCCC-HHHHHHHHHHhhcCCCC-EEEEEhHHHHHHcCCCccCC----ccEEEEc
Confidence 3445666777778877777 77888888888333345 99999999999999999986 5555554
No 366
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=23.13 E-value=2.3e+02 Score=24.74 Aligned_cols=54 Identities=15% Similarity=0.201 Sum_probs=36.5
Q ss_pred CCCCCCccchhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHH---H---HhCCCCceEEEeeCCc
Q 028808 87 YTGVCSNQHVPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWA---E---KLQAKDVIEFYGDFDG 146 (203)
Q Consensus 87 ~cp~C~~ehl~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~---~---~~~l~~~fpllsD~~~ 146 (203)
.++.+.. ..-.+...++.+.|++ +|=|++++.+..+++. + +.+.+ .|++.|..-
T Consensus 31 nT~T~Dv---~aTv~QI~~L~~aG~e-iVRvaVp~~~~A~al~~I~~~l~~~~~~--vPLVADiHF 90 (406)
T 4g9p_A 31 NTPTRDV---EATTAQVLELHRAGSE-IVRLTVNDEEAAKAVPEIKRRLLAEGVE--VPLVGDFHF 90 (406)
T ss_dssp CSCTTCH---HHHHHHHHHHHHHTCS-EEEEECCSHHHHHHHHHHHHHHHHTTCC--CCEEEECCS
T ss_pred CCCcccH---HHHHHHHHHHHHcCCC-EEEEecCCHHHHHhHHHHHHHHHhcCCC--CceEeeecc
Confidence 4455443 3333344677789999 9999999987666552 2 24565 999999844
No 367
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=22.72 E-value=1.2e+02 Score=22.18 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=31.0
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...++.+.++++|+. +..+|..+........+..++.
T Consensus 86 ~pg~~~~l~~L~~~g~~-~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 86 NPGVREALEFVKSKRIK-LALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHTTCG
T ss_pred CccHHHHHHHHHHcCCC-cccccCCcHHHHHHHHHhcCCC
Confidence 57778888889999987 7777777777777788888874
No 368
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=22.71 E-value=33 Score=26.95 Aligned_cols=36 Identities=14% Similarity=0.208 Sum_probs=26.7
Q ss_pred ceEEEEEe-CCEEEEEEeecCCC--CcccCCHHHHHhcC
Q 028808 168 ERWSAYVE-DGRIKALNVEEAPS--KMKVSGGDVILGQI 203 (203)
Q Consensus 168 ~r~tfIId-dG~I~~~~~~~~~~--~~~~~~a~~vL~~l 203 (203)
.+.|+|+| |+++++.......+ -..++.++++|+++
T Consensus 33 ~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l 71 (204)
T 3qle_A 33 RPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYL 71 (204)
T ss_dssp CSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHH
T ss_pred CCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHH
Confidence 35699999 99999987665433 24678888888763
No 369
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=22.31 E-value=1.7e+02 Score=22.63 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=27.6
Q ss_pred hhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 97 PSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 97 ~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
+...+...+++++|+. ++.+|-.+......+.+..+++
T Consensus 20 ~~~~~~l~~l~~~g~~-~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFE-IIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEE-EEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHcCCC
Confidence 3355566777888987 7766666777788888888874
No 370
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=22.22 E-value=1.3e+02 Score=22.48 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=26.8
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...++.++++++|+. +..+|..+........+. ++.
T Consensus 111 ~~~~~~~l~~l~~~g~~-~~i~t~~~~~~~~~~l~~-~l~ 148 (243)
T 3qxg_A 111 MPGAWELLQKVKSEGLT-PMVVTGSGQLSLLERLEH-NFP 148 (243)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECCCCCHHHHTTHHH-HST
T ss_pred CCCHHHHHHHHHHcCCc-EEEEeCCcHHHHHHHHHH-hHH
Confidence 46677778888899998 888876665555555555 654
No 371
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=22.14 E-value=2.8e+02 Score=21.62 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=28.3
Q ss_pred HHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 99 YKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 99 l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
..+...+++++|+. ++.+|-.+......+.++.++.
T Consensus 31 ~~~~l~~l~~~G~~-~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 31 AAPWLTRLREANVP-VILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp THHHHHHHHHTTCC-EEEECSSCHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHcCCC
Confidence 45566777889998 8888877878888888888874
No 372
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=22.05 E-value=23 Score=30.66 Aligned_cols=8 Identities=38% Similarity=0.368 Sum_probs=4.1
Q ss_pred HHHHhCCC
Q 028808 128 WAEKLQAK 135 (203)
Q Consensus 128 ~~~~~~l~ 135 (203)
+.++++++
T Consensus 281 LL~~~gV~ 288 (362)
T 2jad_A 281 LFEKLKVP 288 (362)
T ss_dssp HHTTTCCC
T ss_pred HHHHcCCC
Confidence 44555553
No 373
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=21.79 E-value=1.2e+02 Score=22.97 Aligned_cols=39 Identities=5% Similarity=0.006 Sum_probs=31.3
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.+...++.++++++|+. +..+|..+....+...+..++.
T Consensus 112 ~~~~~~~l~~l~~~g~~-~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 112 IEGAAETLRALRAAGVP-FAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp CTTHHHHHHHHHHHTCC-EEEECSSCHHHHHHHHHHTTCH
T ss_pred CccHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHhcChH
Confidence 46677778888888998 9888888877788888888873
No 374
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=21.22 E-value=1.3e+02 Score=22.93 Aligned_cols=39 Identities=28% Similarity=0.405 Sum_probs=32.3
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. +..+|.+.....+...++.++.
T Consensus 146 ~~~~~~~l~~l~~~g~~-~~i~T~~~~~~~~~~~~~~gl~ 184 (280)
T 3skx_A 146 RPESREAISKLKAIGIK-CMMLTGDNRFVAKWVAEELGLD 184 (280)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEECSSCHHHHHHHHHHHTCS
T ss_pred CHhHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHcCCh
Confidence 46677778888999998 8888888888888889999885
No 375
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=21.18 E-value=95 Score=23.40 Aligned_cols=39 Identities=15% Similarity=0.053 Sum_probs=30.9
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCH---------------HHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDP---------------YVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~---------------~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. ++.+|-+.. ...+...+++++.
T Consensus 58 ~~g~~e~L~~L~~~G~~-~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 111 (218)
T 2o2x_A 58 RPQMLPAIATANRAGIP-VVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF 111 (218)
T ss_dssp CGGGHHHHHHHHHHTCC-EEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCE-EEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc
Confidence 57778888889999998 888887765 5667788888864
No 376
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=21.14 E-value=92 Score=25.62 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=33.1
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCCHHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVNDPYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~~~~~~~~~~~~~l~ 135 (203)
.|...+..++++++|+. +..+|.......+.+.++.++.
T Consensus 181 ~pg~~e~L~~Lk~~G~~-v~IvSn~~~~~~~~~l~~lgl~ 219 (317)
T 4eze_A 181 SPGLLTILPVIKAKGFK-TAIISGGLDIFTQRLKARYQLD 219 (317)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEEHHHHHHHHHHHTCS
T ss_pred CcCHHHHHHHHHhCCCE-EEEEeCccHHHHHHHHHHcCCC
Confidence 36677778889999998 9999988888889999999985
No 377
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=20.96 E-value=77 Score=25.84 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=32.4
Q ss_pred hhhHHHhHHHHHHcCCcEEEEEecCC----HHHHHHHHHHhCCC
Q 028808 96 VPSYKNNIDKFKAKGIDSVICVAVND----PYVMNGWAEKLQAK 135 (203)
Q Consensus 96 l~~l~~~~~~f~~~gv~~vi~IS~d~----~~~~~~~~~~~~l~ 135 (203)
+|...++++.++++|+. |+.||..+ ......+.+++|++
T Consensus 103 ~pg~~ell~~L~~~G~~-i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 103 IPGAVEFSNYVNANGGT-MFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CTTHHHHHHHHHHTTCE-EEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHCCCe-EEEEeCCCccccHHHHHHHHHHcCcC
Confidence 67888889999999998 98887543 35788999999997
No 378
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=20.88 E-value=49 Score=27.76 Aligned_cols=39 Identities=5% Similarity=-0.077 Sum_probs=19.6
Q ss_pred EEEEEeeCCCCCCCCccchhhHHHhHHHHHHcC-CcEEEEEec
Q 028808 78 VVIFGLPGAYTGVCSNQHVPSYKNNIDKFKAKG-IDSVICVAV 119 (203)
Q Consensus 78 vVL~~f~~~~cp~C~~ehl~~l~~~~~~f~~~g-v~~vi~IS~ 119 (203)
.+++|+ ..+|+.|..- +..|++++++|+.+| +. ++-|..
T Consensus 250 ~~~~f~-~~~~~~~~~~-~~~l~~vA~~~~~~~ki~-F~~id~ 289 (367)
T 3us3_A 250 HIVAFA-EEADPDGYEF-LEILKSVAQDNTDNPDLS-IIWIDP 289 (367)
T ss_dssp EEEEEC-CTTSHHHHHH-HHHHHHHHHHTTTCTTCC-EEEECG
T ss_pred EEEEEE-cCCChhHHHH-HHHHHHHHHHcCCCCceE-EEEECC
Confidence 444433 3445444444 566666666666542 44 444433
No 379
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=20.22 E-value=1.5e+02 Score=18.77 Aligned_cols=27 Identities=7% Similarity=-0.033 Sum_probs=21.8
Q ss_pred EEEecCCHHHHHHHHHHhCCCCceEEEee
Q 028808 115 ICVAVNDPYVMNGWAEKLQAKDVIEFYGD 143 (203)
Q Consensus 115 i~IS~d~~~~~~~~~~~~~l~~~fpllsD 143 (203)
|.|+++.....+++.++++++ |.++.+
T Consensus 51 I~V~p~~~~~f~~~L~~~~I~--y~Vlie 77 (78)
T 2gjf_A 51 ILIPSDMVEWFLEMLKAKGIP--FTVYVE 77 (78)
T ss_dssp EEECTTSHHHHHHHHHHHTCC--EEEEEE
T ss_pred EEECHHHHHHHHHHHHHCCCc--EEEEeC
Confidence 567788888889999999997 887754
Done!