Query 028809
Match_columns 203
No_of_seqs 269 out of 1770
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 03:58:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028809.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028809hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 99.9 9E-27 3.1E-31 185.4 10.7 100 102-203 42-150 (151)
2 4eld_A MJ16.5-P1, small heat s 99.9 2.8E-25 9.7E-30 178.1 13.2 97 102-201 56-161 (161)
3 3gla_A Low molecular weight he 99.9 7.4E-25 2.5E-29 162.2 13.5 89 102-191 3-99 (100)
4 4fei_A Heat shock protein-rela 99.9 1.5E-24 5.1E-29 161.7 14.0 91 101-192 4-97 (102)
5 3l1e_A Alpha-crystallin A chai 99.9 2.5E-23 8.5E-28 156.4 12.9 95 105-200 4-104 (106)
6 3aab_A Putative uncharacterize 99.9 4.9E-23 1.7E-27 158.1 11.6 88 102-191 23-117 (123)
7 2wj5_A Heat shock protein beta 99.9 5.2E-23 1.8E-27 153.3 10.9 96 105-202 3-100 (101)
8 3q9p_A Heat shock protein beta 99.9 2.1E-22 7.2E-27 145.6 11.3 82 108-190 2-85 (85)
9 2klr_A Alpha-crystallin B chai 99.9 5.9E-23 2E-27 167.3 9.2 96 106-202 66-163 (175)
10 2bol_A TSP36, small heat shock 99.9 5E-22 1.7E-26 175.0 12.6 122 76-200 68-197 (314)
11 2y1y_A Alpha-crystallin B chai 99.9 4E-21 1.4E-25 140.1 10.4 83 109-192 2-86 (90)
12 2bol_A TSP36, small heat shock 99.8 8.6E-19 2.9E-23 154.3 11.1 86 104-190 221-314 (314)
13 2xcm_C SGT1-like protein, cyto 99.1 5.8E-10 2E-14 80.1 9.2 81 103-191 2-82 (92)
14 1rl1_A Suppressor of G2 allele 99.1 8.1E-10 2.8E-14 82.8 9.9 82 102-191 8-89 (114)
15 3eud_A Protein SHQ1; CS domain 98.6 7E-07 2.4E-11 67.5 10.8 80 102-193 16-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.5 1.9E-07 6.5E-12 72.6 5.8 79 102-192 2-84 (134)
17 3igf_A ALL4481 protein; two-do 98.3 1.8E-06 6.1E-11 77.3 8.8 72 104-189 298-369 (374)
18 1x5m_A Calcyclin-binding prote 98.1 7.9E-05 2.7E-09 56.7 12.3 81 103-191 20-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.0 6.8E-05 2.3E-09 58.0 10.2 87 103-190 19-111 (134)
20 1wgv_A KIAA1068 protein; CS do 97.9 0.0002 6.8E-09 54.2 11.8 82 102-191 18-102 (124)
21 1wfi_A Nuclear distribution ge 97.9 0.00018 6.3E-09 54.8 11.2 79 102-191 6-88 (131)
22 3qor_A Nuclear migration prote 97.9 0.00015 5.2E-09 54.8 10.4 79 102-191 15-97 (121)
23 2o30_A Nuclear movement protei 97.8 0.0002 6.8E-09 54.8 10.2 75 103-189 4-79 (131)
24 1ejf_A Progesterone receptor P 97.8 0.00018 6E-09 54.6 9.6 78 105-191 5-82 (125)
25 2rh0_A NUDC domain-containing 97.7 0.00044 1.5E-08 54.6 10.9 78 102-191 12-91 (157)
26 2kmw_A Uncharacterized protein 97.4 0.00047 1.6E-08 54.2 7.6 78 103-191 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.3 0.00011 3.8E-09 56.6 3.1 84 103-190 6-97 (134)
28 4fei_A Heat shock protein-rela 82.8 5.6 0.00019 28.1 7.4 34 114-147 62-96 (102)
29 3q9p_A Heat shock protein beta 69.7 11 0.00039 25.6 5.7 34 155-190 7-40 (85)
30 3gla_A Low molecular weight he 69.6 8.8 0.0003 26.7 5.2 33 113-145 64-97 (100)
31 2wj5_A Heat shock protein beta 69.1 7.9 0.00027 27.4 4.9 33 115-147 56-90 (101)
32 4eld_A MJ16.5-P1, small heat s 67.5 38 0.0013 25.7 9.3 33 156-190 67-99 (161)
33 2cql_A OK/SW-CL.103, 60S ribos 67.4 15 0.00051 26.3 6.1 46 126-188 20-68 (100)
34 3l1e_A Alpha-crystallin A chai 66.7 9.4 0.00032 27.3 4.9 34 115-148 57-92 (106)
35 1gme_A Heat shock protein 16.9 61.0 16 0.00055 27.7 5.6 33 114-146 105-138 (151)
36 1vq8_E 50S ribosomal protein L 60.1 10 0.00034 30.2 4.3 46 126-188 9-54 (178)
37 2y1y_A Alpha-crystallin B chai 58.1 20 0.00067 24.6 5.2 32 156-189 7-38 (90)
38 2nwt_A UPF0165 protein AF_2212 57.7 12 0.00039 25.4 3.7 17 171-187 3-19 (69)
39 1rl6_A Protein (ribosomal prot 56.5 34 0.0012 27.0 6.9 45 126-188 11-55 (177)
40 1nkw_E 50S ribosomal protein L 51.9 19 0.00065 29.4 4.8 46 126-189 39-84 (212)
41 2klr_A Alpha-crystallin B chai 51.2 18 0.00061 28.4 4.4 32 115-146 118-151 (175)
42 3iz5_F 60S ribosomal protein L 49.1 19 0.00065 28.8 4.3 46 126-188 13-60 (190)
43 3j21_F 50S ribosomal protein L 49.1 17 0.00058 29.0 4.0 45 126-187 14-58 (184)
44 1rl1_A Suppressor of G2 allele 48.5 22 0.00075 25.2 4.3 35 112-146 53-88 (114)
45 3v2d_H 50S ribosomal protein L 47.0 21 0.00073 28.2 4.3 44 126-187 12-55 (180)
46 3aab_A Putative uncharacterize 46.4 47 0.0016 23.9 5.9 34 156-191 35-69 (123)
47 3pet_A Putative adhesin; right 44.5 48 0.0016 26.4 6.2 39 106-144 32-71 (221)
48 2xcm_C SGT1-like protein, cyto 42.9 18 0.00062 24.4 2.9 35 112-146 46-81 (92)
49 3u5e_H L8, RP24, YL11, 60S rib 40.9 38 0.0013 27.1 4.9 46 126-188 13-59 (191)
50 3bbo_I Ribosomal protein L6; l 35.9 27 0.00092 28.7 3.3 45 126-188 54-99 (223)
51 2ks0_A Uncharacterized protein 35.1 20 0.0007 24.2 2.1 22 124-145 18-39 (71)
52 4a17_E RPL9, 60S ribosomal pro 32.6 24 0.00083 28.2 2.5 44 126-187 13-58 (188)
53 2zkr_e 60S ribosomal protein L 31.6 95 0.0032 24.7 5.9 47 125-188 12-61 (192)
54 1n91_A ORF, hypothetical prote 30.2 76 0.0026 23.0 4.7 38 108-146 8-46 (108)
55 1ew4_A CYAY protein; friedreic 29.3 30 0.001 25.0 2.3 17 172-188 29-45 (106)
56 3r8s_G 50S ribosomal protein L 27.6 24 0.00081 27.9 1.6 43 126-186 11-53 (176)
57 3jx8_A Putative lipoprotein; s 24.9 72 0.0025 25.7 4.2 40 106-145 34-73 (250)
58 3jx8_A Putative lipoprotein; s 24.9 1.1E+02 0.0038 24.5 5.3 20 170-189 54-73 (250)
59 3lyc_A Putative pectinase; str 23.4 93 0.0032 24.8 4.5 20 170-189 48-67 (241)
60 3oeq_A Frataxin homolog, mitoc 23.0 48 0.0016 24.7 2.4 16 173-188 49-64 (123)
61 2kgs_A Uncharacterized protein 22.7 56 0.0019 24.1 2.8 66 121-186 2-92 (132)
62 2o30_A Nuclear movement protei 22.5 1.1E+02 0.0039 22.2 4.5 31 156-187 15-45 (131)
63 3t3l_A Frataxin, mitochondrial 20.8 69 0.0024 23.9 2.9 17 171-187 40-56 (129)
64 3rd4_A Uncharacterized protein 20.3 54 0.0018 23.6 2.1 34 110-143 33-77 (100)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.94 E-value=9e-27 Score=185.39 Aligned_cols=100 Identities=35% Similarity=0.560 Sum_probs=86.1
Q ss_pred CCCceeEEEcCCeEEEEEECCCCCCCceEEEEE-CCEEEEEEeecCcCCC--------CceeeEEEEEEECCCCCCCCcc
Q 028809 102 LRPRWAAKVTKDALNLSVDMPGLAKEDVRVSLE-QNTLVIKGKGGKEDGD--------EESVRRYTIRIELPEKIFKTDQ 172 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~-~~~L~I~g~~~~~~~~--------e~~~~~F~r~~~LP~~v~d~d~ 172 (203)
+.|++||+|++++|+|.++|||++++||+|+++ ++.|+|+|+++.+.++ |+.++.|.|+|.||.+| +.+.
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~ 120 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDA-KVEE 120 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCC-CGGG
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCc-cccc
Confidence 689999999999999999999999999999995 6899999998765432 34568999999999999 9999
Q ss_pred eEEEEECCEEEEEEeccCCCCCCCeEEeecC
Q 028809 173 IKAEMKNGVLKLTLPMMKEDERTDVLHIKVE 203 (203)
Q Consensus 173 i~A~~~nGvL~I~lPK~~~~~~~~~i~I~Ie 203 (203)
|+|+|+||||+|++||.++. +++.+.|+|+
T Consensus 121 i~A~~~nGvL~I~lPK~~~~-~~~~~~I~I~ 150 (151)
T 1gme_A 121 VKAGLENGVLTVTVPKAEVK-KPEVKAIQIS 150 (151)
T ss_dssp CEEEEETTEEEEEEECCCCC-TTCCCCCCCC
T ss_pred eEEEEECCEEEEEEEccCcC-CCCCeEeeeC
Confidence 99999999999999998654 3445555553
No 2
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.93 E-value=2.8e-25 Score=178.06 Aligned_cols=97 Identities=24% Similarity=0.335 Sum_probs=84.2
Q ss_pred CCCceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCC--------Cc-eeeEEEEEEECCCCCCCCcc
Q 028809 102 LRPRWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGD--------EE-SVRRYTIRIELPEKIFKTDQ 172 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~--------e~-~~~~F~r~~~LP~~v~d~d~ 172 (203)
+.| +||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+... |+ .++.|.|+|.||.+| |.++
T Consensus 56 ~~p-vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~v-d~~~ 133 (161)
T 4eld_A 56 FMP-ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATV-KEEN 133 (161)
T ss_dssp CCC-EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCB-CGGG
T ss_pred ccc-eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCc-cccc
Confidence 444 999999999999999999999999999999999999998764321 34 678999999999999 9999
Q ss_pred eEEEEECCEEEEEEeccCCCCCCCeEEee
Q 028809 173 IKAEMKNGVLKLTLPMMKEDERTDVLHIK 201 (203)
Q Consensus 173 i~A~~~nGvL~I~lPK~~~~~~~~~i~I~ 201 (203)
|+|+|+||||+|++||.++. ++++|+|+
T Consensus 134 i~A~~~nGvL~I~lpK~~~~-~~r~I~Ie 161 (161)
T 4eld_A 134 ASAKFENGVLSVILPKAESS-IKKGINIE 161 (161)
T ss_dssp CEEEEETTEEEEEEEBCGGG-SCCCCCCC
T ss_pred EEEEEECCEEEEEEEcCCCC-CCcEeecC
Confidence 99999999999999998554 45666553
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.92 E-value=7.4e-25 Score=162.17 Aligned_cols=89 Identities=27% Similarity=0.486 Sum_probs=80.8
Q ss_pred CCCceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCC--------CceeeEEEEEEECCCCCCCCcce
Q 028809 102 LRPRWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGD--------EESVRRYTIRIELPEKIFKTDQI 173 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~--------e~~~~~F~r~~~LP~~v~d~d~i 173 (203)
|.|++||+|++++|+|.++|||+++++|+|+++++.|+|+|+++.+.+. |+.++.|.|+|.||.++ |.+.|
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~v-d~~~i 81 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSA-DADGI 81 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTB-CTTSC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCc-ChHHe
Confidence 7899999999999999999999999999999999999999998765432 34578999999999999 99999
Q ss_pred EEEEECCEEEEEEeccCC
Q 028809 174 KAEMKNGVLKLTLPMMKE 191 (203)
Q Consensus 174 ~A~~~nGvL~I~lPK~~~ 191 (203)
+|+|+||+|+|++||.++
T Consensus 82 ~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEEETTEEEEEEEBC--
T ss_pred EEEEeCCEEEEEEecCCC
Confidence 999999999999999754
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.92 E-value=1.5e-24 Score=161.67 Aligned_cols=91 Identities=18% Similarity=0.346 Sum_probs=83.0
Q ss_pred CCCCceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCC---CCceeeEEEEEEECCCCCCCCcceEEEE
Q 028809 101 GLRPRWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDG---DEESVRRYTIRIELPEKIFKTDQIKAEM 177 (203)
Q Consensus 101 ~~~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~---~e~~~~~F~r~~~LP~~v~d~d~i~A~~ 177 (203)
.|.|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+.. .|+.++.|.|+|.||..+ +.+.|+|+|
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~v-d~~~i~A~~ 82 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPV-RPASGVASL 82 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCB-CTTCCEEEE
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCc-chhHcEEEE
Confidence 3789999999999999999999999999999999999999999865422 256788999999999999 999999999
Q ss_pred ECCEEEEEEeccCCC
Q 028809 178 KNGVLKLTLPMMKED 192 (203)
Q Consensus 178 ~nGvL~I~lPK~~~~ 192 (203)
+||+|+|++||.++.
T Consensus 83 ~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 83 AGGVLTVRFEKLRPT 97 (102)
T ss_dssp ETTEEEEEEEBSSCC
T ss_pred ECCEEEEEEEccCcc
Confidence 999999999998654
No 5
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.90 E-value=2.5e-23 Score=156.41 Aligned_cols=95 Identities=17% Similarity=0.363 Sum_probs=82.1
Q ss_pred ceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCC-CceeeEEEEEEECCCCCCCCcceEEEE-ECCEE
Q 028809 105 RWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGD-EESVRRYTIRIELPEKIFKTDQIKAEM-KNGVL 182 (203)
Q Consensus 105 ~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~F~r~~~LP~~v~d~d~i~A~~-~nGvL 182 (203)
..+|+|++++|+|.++|||++++||+|+++++.|+|+|+++....+ ....+.|.|+|.||.+| |.++|+|+| +||+|
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNV-DQSALSCSLSADGML 82 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTB-CTTSCEEEECTTSEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEE
Confidence 4799999999999999999999999999999999999998654332 23457899999999999 999999999 89999
Q ss_pred EEEEeccCCCC----CCCeEEe
Q 028809 183 KLTLPMMKEDE----RTDVLHI 200 (203)
Q Consensus 183 ~I~lPK~~~~~----~~~~i~I 200 (203)
+|++||.++.. +++.|.|
T Consensus 83 ~I~~PK~~~~~~~~~~~r~I~I 104 (106)
T 3l1e_A 83 TFSGPKIPSGVDAGHSERAIPV 104 (106)
T ss_dssp EEEEEBCCCCTTTTSSSCCCCC
T ss_pred EEEEEccCcccccCCCCeEeee
Confidence 99999987652 4555555
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.89 E-value=4.9e-23 Score=158.14 Aligned_cols=88 Identities=20% Similarity=0.343 Sum_probs=79.4
Q ss_pred CCCceeEEEcCCeEEEEEECCCCCCCceEEEEEC-CEEEEEEeecCcCCC-----CceeeEEEEEEECCCCCCCCcce-E
Q 028809 102 LRPRWAAKVTKDALNLSVDMPGLAKEDVRVSLEQ-NTLVIKGKGGKEDGD-----EESVRRYTIRIELPEKIFKTDQI-K 174 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~~-~~L~I~g~~~~~~~~-----e~~~~~F~r~~~LP~~v~d~d~i-~ 174 (203)
+.|++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++.+... |+.+ .|.|+|.||.++ +.++| +
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~v-d~~~i~~ 100 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNV-AKDAEIS 100 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEE-CTTCCCE
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCc-CcchhCe
Confidence 4689999999999999999999999999999999 999999998765421 3445 899999999999 99999 9
Q ss_pred EEEECCEEEEEEeccCC
Q 028809 175 AEMKNGVLKLTLPMMKE 191 (203)
Q Consensus 175 A~~~nGvL~I~lPK~~~ 191 (203)
|+|+||+|+|++||.++
T Consensus 101 A~~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 101 GKYENGVLTIRIPIAGT 117 (123)
T ss_dssp EEEETTEEEEEEEGGGE
T ss_pred eEEcCCEEEEEEEcCCC
Confidence 99999999999999854
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.89 E-value=5.2e-23 Score=153.32 Aligned_cols=96 Identities=10% Similarity=0.189 Sum_probs=80.9
Q ss_pred ceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCC-CceeeEEEEEEECCCCCCCCcceEEEE-ECCEE
Q 028809 105 RWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGD-EESVRRYTIRIELPEKIFKTDQIKAEM-KNGVL 182 (203)
Q Consensus 105 ~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~F~r~~~LP~~v~d~d~i~A~~-~nGvL 182 (203)
.+||+|++++|+|.++|||++++||+|+++++.|+|+|+++.+.++ ....+.|.|+|.||.+| |.+.|+|+| +||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~v-d~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGV-DPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTB-CTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHCEEEECCCCEE
Confidence 3799999999999999999999999999999999999998764432 23456799999999999 999999999 89999
Q ss_pred EEEEeccCCCCCCCeEEeec
Q 028809 183 KLTLPMMKEDERTDVLHIKV 202 (203)
Q Consensus 183 ~I~lPK~~~~~~~~~i~I~I 202 (203)
+|++||.++ .+++.++|..
T Consensus 82 ~I~lPK~~~-~~~~~~~i~~ 100 (101)
T 2wj5_A 82 SIQATPASA-QASLPSPPAA 100 (101)
T ss_dssp EEEECBCCC-CCSSCC----
T ss_pred EEEEECCCc-CCCCCCcccc
Confidence 999999854 4566777653
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.88 E-value=2.1e-22 Score=145.64 Aligned_cols=82 Identities=23% Similarity=0.400 Sum_probs=70.7
Q ss_pred EEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCC-CceeeEEEEEEECCCCCCCCcceEEEEE-CCEEEEE
Q 028809 108 AKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGD-EESVRRYTIRIELPEKIFKTDQIKAEMK-NGVLKLT 185 (203)
Q Consensus 108 i~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~F~r~~~LP~~v~d~d~i~A~~~-nGvL~I~ 185 (203)
+.|++++|.|.++|||++++||+|+++++.|+|+|+++...++ +..+++|.|+|.||.+| |.++|+|+|+ ||+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~v-d~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGV-DPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTC-CGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCc-ChHHcEEEECCCCEEEEE
Confidence 4688999999999999999999999999999999998765332 34468999999999999 9999999998 9999999
Q ss_pred EeccC
Q 028809 186 LPMMK 190 (203)
Q Consensus 186 lPK~~ 190 (203)
+||.+
T Consensus 81 lPK~k 85 (85)
T 3q9p_A 81 APMPK 85 (85)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99963
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.88 E-value=5.9e-23 Score=167.29 Aligned_cols=96 Identities=16% Similarity=0.334 Sum_probs=72.7
Q ss_pred eeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCC-CceeeEEEEEEECCCCCCCCcceEEEE-ECCEEE
Q 028809 106 WAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGD-EESVRRYTIRIELPEKIFKTDQIKAEM-KNGVLK 183 (203)
Q Consensus 106 ~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~F~r~~~LP~~v~d~d~i~A~~-~nGvL~ 183 (203)
+||+|++++|+|.++|||+++|||+|+++++.|+|+|+++.+.++ +...+.|.|+|.||.+| |.++|+|+| +||||+
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~V-d~~~i~A~~s~dGvL~ 144 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSLSSDGVLT 144 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTC-CTTTCEEEECTTSCEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCc-ChhHeEEEEcCCCEEE
Confidence 799999999999999999999999999999999999998754322 23356899999999999 999999999 799999
Q ss_pred EEEeccCCCCCCCeEEeec
Q 028809 184 LTLPMMKEDERTDVLHIKV 202 (203)
Q Consensus 184 I~lPK~~~~~~~~~i~I~I 202 (203)
|++||.++....+.|.|+.
T Consensus 145 I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 145 VNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp EEEECC-------------
T ss_pred EEEECCCCCCCCeEEEEec
Confidence 9999986554457777754
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.87 E-value=5e-22 Score=174.95 Aligned_cols=122 Identities=16% Similarity=0.241 Sum_probs=97.0
Q ss_pred CCC-ccchHHHh-hhcCCC-CccCCCCCCCCCceeEEEcCC----eEEEEEECCCCCCCceEEEEECCEEEEEEeecCcC
Q 028809 76 EPF-SRSRSLSM-NENGEG-LYSAGAGAGLRPRWAAKVTKD----ALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKED 148 (203)
Q Consensus 76 dPf-~~~~~l~~-~~~~~~-~~~~~~~~~~~p~~di~E~~~----~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~ 148 (203)
+|| ..++.|.+ .+++.. .++...++.+.|++||+|+++ +|+|.++|||++|+||+|++++|.|+|+|+++.+.
T Consensus 68 dpf~~~~r~~~~~~~~~~~~~~~~~~~~~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~ 147 (314)
T 2bol_A 68 NAFESVMKEMSAIQPREFHPELEYTQPGELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVAC 147 (314)
T ss_dssp HHHHHHHHHHHTCCCEECCTTTSSCSCCTTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSST
T ss_pred CchhhhhHhhhhhhHHHHhhhccCCccccCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccC
Confidence 466 34456666 444211 111111223789999999999 99999999999999999999999999999998766
Q ss_pred CCCceeeEEEEEEECCCCCCCCcceEEEEE-CCEEEEEEeccCCCCCCCeEEe
Q 028809 149 GDEESVRRYTIRIELPEKIFKTDQIKAEMK-NGVLKLTLPMMKEDERTDVLHI 200 (203)
Q Consensus 149 ~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~-nGvL~I~lPK~~~~~~~~~i~I 200 (203)
++++.++.|.|+|.||.+| +.++|+|+|+ ||||+|++||.+++. +.|.|
T Consensus 148 e~~r~~g~F~R~~~LP~~V-d~e~i~A~~~~nGVL~I~lPK~~~~~--~~I~i 197 (314)
T 2bol_A 148 GDAAMSESVGRSIPLPPSV-DRNHIQATITTDDVLVIEAPVNEPNY--KAIKL 197 (314)
T ss_dssp TCCCBCCCEEEEEECCTTB-CGGGCEEEECSSSEEEEEEEBSSCCT--TTEEE
T ss_pred CCCEEEEEEEEEEECCCCc-cccccEEEEeCCCEEEEEEeccCccc--ceeec
Confidence 6678889999999999999 9999999999 999999999986543 34544
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.85 E-value=4e-21 Score=140.10 Aligned_cols=83 Identities=18% Similarity=0.388 Sum_probs=68.8
Q ss_pred EEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCC-CceeeEEEEEEECCCCCCCCcceEEEE-ECCEEEEEE
Q 028809 109 KVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGD-EESVRRYTIRIELPEKIFKTDQIKAEM-KNGVLKLTL 186 (203)
Q Consensus 109 ~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~-e~~~~~F~r~~~LP~~v~d~d~i~A~~-~nGvL~I~l 186 (203)
.+++++|+|.++|||++++||+|+++++.|+|+|+++...++ ....+.|.|+|.||.+| +.+.|+|+| +||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~v-d~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADV-DPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTB-CGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCc-ChhHcEEEECCCCEEEEEE
Confidence 467899999999999999999999999999999998754332 23456899999999999 999999999 899999999
Q ss_pred eccCCC
Q 028809 187 PMMKED 192 (203)
Q Consensus 187 PK~~~~ 192 (203)
||.++.
T Consensus 81 pK~~~~ 86 (90)
T 2y1y_A 81 PRKQVS 86 (90)
T ss_dssp CBC---
T ss_pred EcCCCC
Confidence 998654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.77 E-value=8.6e-19 Score=154.33 Aligned_cols=86 Identities=22% Similarity=0.429 Sum_probs=72.5
Q ss_pred CceeEEEcC---CeEEEEEEC-CCCCCCceEEEEECCEEEEEEeecCcCCC----CceeeEEEEEEECCCCCCCCcceEE
Q 028809 104 PRWAAKVTK---DALNLSVDM-PGLAKEDVRVSLEQNTLVIKGKGGKEDGD----EESVRRYTIRIELPEKIFKTDQIKA 175 (203)
Q Consensus 104 p~~di~E~~---~~y~i~vdL-PGv~kedI~V~v~~~~L~I~g~~~~~~~~----e~~~~~F~r~~~LP~~v~d~d~i~A 175 (203)
..++|.+++ ++|+|.++| ||++|+||+|++++|.|+|+|+++.+.+. |+.+|.|.|+|.||++| |.++|+|
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~v-d~~~i~A 299 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVV-DASKTQA 299 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEE-CGGGCEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCc-ChHHeEE
Confidence 457887765 489999999 99999999999999999999999876543 77899999999999999 9999999
Q ss_pred EEECCEEEEEEeccC
Q 028809 176 EMKNGVLKLTLPMMK 190 (203)
Q Consensus 176 ~~~nGvL~I~lPK~~ 190 (203)
+|+||||+|++||.+
T Consensus 300 ~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 300 EIVDGLMVVEAPLFK 314 (314)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEeCCEEEEEEecCC
Confidence 999999999999963
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.08 E-value=5.8e-10 Score=80.14 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=73.0
Q ss_pred CCceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEE
Q 028809 103 RPRWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVL 182 (203)
Q Consensus 103 ~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL 182 (203)
.|.++|+++++.+.|.+.+||+.+++++|.+.++.|.|++... ....|...+.|+..| +++..++++.+|.|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~-------~~~~y~~~~~L~~~I-~~~~s~~~~~~~~l 73 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP-------GEDAYYLQPRLFGKI-IPDKCKYEVLSTKI 73 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT-------TSCCEEECCBBSSCB-CGGGCEEEECSSCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC-------CCcEEEEeeEcCCcc-CchhEEEEEECCEE
Confidence 4779999999999999999999999999999999999998742 123688999999999 99999999999999
Q ss_pred EEEEeccCC
Q 028809 183 KLTLPMMKE 191 (203)
Q Consensus 183 ~I~lPK~~~ 191 (203)
.|+|+|.++
T Consensus 74 ~i~L~K~~~ 82 (92)
T 2xcm_C 74 EICLAKADI 82 (92)
T ss_dssp EEEEEBSSS
T ss_pred EEEEEcCCC
Confidence 999999754
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.07 E-value=8.1e-10 Score=82.75 Aligned_cols=82 Identities=17% Similarity=0.218 Sum_probs=73.7
Q ss_pred CCCceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCE
Q 028809 102 LRPRWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGV 181 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGv 181 (203)
..|.++|+++++.+.|.+.+||+.+++++|.+.++.|.|++... ....|...+.|+..| +++..++++.+|.
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~-------~~~~y~~~~~L~~~I-~~e~s~~~~~~~~ 79 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP-------SGEDYNLKLELLHPI-IPEQSTFKVLSTK 79 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT-------TSSEEEEEECBSSCC-CGGGEEEEECSSS
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC-------CCcEEEEEeeCCCcC-CccccEEEEECCE
Confidence 35679999999999999999999999999999999999998742 123799999999999 9999999999999
Q ss_pred EEEEEeccCC
Q 028809 182 LKLTLPMMKE 191 (203)
Q Consensus 182 L~I~lPK~~~ 191 (203)
|.|+|+|.++
T Consensus 80 l~i~L~K~~~ 89 (114)
T 1rl1_A 80 IEIKLKKPEA 89 (114)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEEcCCC
Confidence 9999999754
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.56 E-value=7e-07 Score=67.47 Aligned_cols=80 Identities=13% Similarity=0.417 Sum_probs=72.7
Q ss_pred CCCceeEEEcCCeEEEEEECCCCC--CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEE--
Q 028809 102 LRPRWAAKVTKDALNLSVDMPGLA--KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEM-- 177 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLPGv~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~-- 177 (203)
..|.+.|.++++.++|.+.+|.+. ..++++.++++.+..... .|--++.||..+.+.+.-+|+|
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~------------PYyLRL~lP~~vved~~~~A~YD~ 83 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYDS 83 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET------------TEEEEEECSSCEECSTTCEEEEET
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC------------CeEEEEecCcceecCCCcceEEeC
Confidence 578899999999999999999977 889999999999999987 7889999999998888899999
Q ss_pred ECCEEEEEEeccCCCC
Q 028809 178 KNGVLKLTLPMMKEDE 193 (203)
Q Consensus 178 ~nGvL~I~lPK~~~~~ 193 (203)
++|.++|++||..+.+
T Consensus 84 d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 84 KDECINVKVAKLNKNE 99 (115)
T ss_dssp TTTEEEEEEEESSTTC
T ss_pred CCcEEEEEEcCCcCCC
Confidence 5999999999976543
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.47 E-value=1.9e-07 Score=72.57 Aligned_cols=79 Identities=11% Similarity=0.407 Sum_probs=71.9
Q ss_pred CCCceeEEEcCCeEEEEEECCCCC--CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEE--
Q 028809 102 LRPRWAAKVTKDALNLSVDMPGLA--KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEM-- 177 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLPGv~--kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~-- 177 (203)
..|.+.|.++++.++|.+.+|... ..++++.+++..+..... .|.-++.||..|.+.+..+|+|
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~------------PYyLRL~LP~~V~e~~~~kA~YD~ 69 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS------------PYYLRLRFPHELIDDERSTAQYDS 69 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS------------SSCEEECCSSCEECCSSCEEEEET
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC------------CeEEEecCCCeeecCCCcceeEec
Confidence 368899999999999999999999 899999999999998877 7888999999998888999999
Q ss_pred ECCEEEEEEeccCCC
Q 028809 178 KNGVLKLTLPMMKED 192 (203)
Q Consensus 178 ~nGvL~I~lPK~~~~ 192 (203)
+.|.|+|++||....
T Consensus 70 d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 70 KDECINVKVAKLNKN 84 (134)
T ss_dssp TTTEEEEEEEESSTT
T ss_pred cCCEEEEEEeCCCCC
Confidence 589999999997554
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.30 E-value=1.8e-06 Score=77.29 Aligned_cols=72 Identities=14% Similarity=0.186 Sum_probs=64.0
Q ss_pred CceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEE
Q 028809 104 PRWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLK 183 (203)
Q Consensus 104 p~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~ 183 (203)
+++.|.+. .|.+++.|||++|++|++...++.|+|+.. .|+|.|.||..+....-..|+|+||.|+
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~g------------~~rR~i~LP~~L~~~~v~~A~~~~~~L~ 363 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEAG------------DQRRNIFLPPALSGRPITGAKFQNNYLI 363 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEET------------TEEEEEECCTTTTTCCEEEEEEETTEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEEC------------CEeecccCCHHHcCCCccccEEECCEEE
Confidence 45666444 899999999999999999999999999987 8999999999997777899999999999
Q ss_pred EEEecc
Q 028809 184 LTLPMM 189 (203)
Q Consensus 184 I~lPK~ 189 (203)
|++-..
T Consensus 364 i~~~~~ 369 (374)
T 3igf_A 364 ISFLEH 369 (374)
T ss_dssp EEECCC
T ss_pred EEEehh
Confidence 998653
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=7.9e-05 Score=56.68 Aligned_cols=81 Identities=12% Similarity=0.231 Sum_probs=70.4
Q ss_pred CCceeEEEcCCeEEEEEECCCC---CCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEE-CCCCCCCCcceEEEEE
Q 028809 103 RPRWAAKVTKDALNLSVDMPGL---AKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIE-LPEKIFKTDQIKAEMK 178 (203)
Q Consensus 103 ~p~~di~E~~~~y~i~vdLPGv---~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~-LP~~v~d~d~i~A~~~ 178 (203)
.+.++|.++.+.+.|.+.+||+ .++++.|.+..+.|.|.+.... ...|.-.+. |-..| +++..+..+.
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~-------~~~y~~~~~~L~~~I-~~e~S~~~v~ 91 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN-------GKSYSMIVNNLLKPI-SVEGSSKKVK 91 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS-------SSCEEEEEECBSSCC-CTTTCEEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC-------CCcEEEEhHHhcCcc-CcccCEEEEe
Confidence 4578999999999999999999 8999999999999999885321 136888885 99999 9999999999
Q ss_pred CCEEEEEEeccCC
Q 028809 179 NGVLKLTLPMMKE 191 (203)
Q Consensus 179 nGvL~I~lPK~~~ 191 (203)
.+.+.|+|-|.++
T Consensus 92 ~~kVei~L~K~~~ 104 (127)
T 1x5m_A 92 TDTVLILCRKKVE 104 (127)
T ss_dssp TTEEEEEEECSSS
T ss_pred CCEEEEEEEECCC
Confidence 9999999999754
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.95 E-value=6.8e-05 Score=58.02 Aligned_cols=87 Identities=9% Similarity=0.118 Sum_probs=71.0
Q ss_pred CCceeEEEc-CCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcC-----CCCceeeEEEEEEECCCCCCCCcceEEE
Q 028809 103 RPRWAAKVT-KDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKED-----GDEESVRRYTIRIELPEKIFKTDQIKAE 176 (203)
Q Consensus 103 ~p~~di~E~-~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~-----~~e~~~~~F~r~~~LP~~v~d~d~i~A~ 176 (203)
.+.++|+++ .+.+.|.|.++++.+++++|.+..+.|.|........ ........|.-.+.|-..| +++..+.+
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I-~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLI-EPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCE-EEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccC-CchhCEEE
Confidence 567999999 9999999999999999999999999999997643110 0000012688888999999 99999999
Q ss_pred EECCEEEEEEeccC
Q 028809 177 MKNGVLKLTLPMMK 190 (203)
Q Consensus 177 ~~nGvL~I~lPK~~ 190 (203)
+..+.+.|+|.|.+
T Consensus 98 v~~~kIeI~L~K~e 111 (134)
T 1wh0_A 98 FTASRIDICLRKRQ 111 (134)
T ss_dssp ECSSEEEEEEEESS
T ss_pred EeCCEEEEEEEECC
Confidence 99999999999974
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.89 E-value=0.0002 Score=54.21 Aligned_cols=82 Identities=18% Similarity=0.251 Sum_probs=68.9
Q ss_pred CCCceeEEEcCCeEEEEEECC-CC-CCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEEC
Q 028809 102 LRPRWAAKVTKDALNLSVDMP-GL-AKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKN 179 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLP-Gv-~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~n 179 (203)
..|.+.|.++.+.+.|.+.|| |+ ++++|+|.+..+.|.|.+.... ...+.-...|...| +++..+..+++
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~-------~~~~~~~~~L~~~I-~~e~S~w~i~~ 89 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN-------GERVLMEGKLTHKI-NTESSLWSLEP 89 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS-------SEEEEEEEEBSSCB-CTTTCEEEECT
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC-------CCceEEcccccCcC-CCcCCEEEEeC
Confidence 478899999999999999998 88 9999999999999999875311 11344567899999 99999999988
Q ss_pred CE-EEEEEeccCC
Q 028809 180 GV-LKLTLPMMKE 191 (203)
Q Consensus 180 Gv-L~I~lPK~~~ 191 (203)
|- |.|+|-|.++
T Consensus 90 ~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 90 GKCVLVNLSKVGE 102 (124)
T ss_dssp TSEEEEEECBSSS
T ss_pred CCEEEEEEEECCC
Confidence 85 9999999753
No 21
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.87 E-value=0.00018 Score=54.85 Aligned_cols=79 Identities=23% Similarity=0.323 Sum_probs=66.8
Q ss_pred CCCceeEEEcCCeEEEEEECC-C--CCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEE
Q 028809 102 LRPRWAAKVTKDALNLSVDMP-G--LAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMK 178 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLP-G--v~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~ 178 (203)
..|.+.|.++.+.+.|.+.|| | +++++|+|.+..+.|.|...... +.-...|...| +++.....++
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~----------~~~~~~L~~~I-~~e~s~w~i~ 74 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQP----------PVVDGELYNEV-KVEESSWLIE 74 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSC----------CSBCSCBSSCB-CSTTCEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCce----------EEEeccccccc-ccccCEEEEc
Confidence 578899999999999999999 6 89999999999999999875221 11233688999 9999999999
Q ss_pred CC-EEEEEEeccCC
Q 028809 179 NG-VLKLTLPMMKE 191 (203)
Q Consensus 179 nG-vL~I~lPK~~~ 191 (203)
+| .|.|+|-|..+
T Consensus 75 ~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 75 DGKVVTVHLEKINK 88 (131)
T ss_dssp TTTEEEEEEEBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 98 89999999764
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.85 E-value=0.00015 Score=54.76 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=67.0
Q ss_pred CCCceeEEEcCCeEEEEEECC-C--CCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEE
Q 028809 102 LRPRWAAKVTKDALNLSVDMP-G--LAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMK 178 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLP-G--v~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~ 178 (203)
..|.+.|.++.+.+.|.+.|| | +++++|+|.+..+.|.|..... .+.-...|...| +++.....++
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~----------~~~~~g~L~~~I-~~deS~w~i~ 83 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ----------PAIIDGELYNEV-KVEESSWLIA 83 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS----------CCSEEEEBSSCB-CGGGCEEEEE
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc----------ceEEeccccccc-cccccEEEEc
Confidence 578899999999999999998 4 7999999999999999876521 122355799999 9999999999
Q ss_pred CC-EEEEEEeccCC
Q 028809 179 NG-VLKLTLPMMKE 191 (203)
Q Consensus 179 nG-vL~I~lPK~~~ 191 (203)
+| .|.|+|-|...
T Consensus 84 ~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 84 DGAVVTVHLEKINK 97 (121)
T ss_dssp TTTEEEEEEEBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 98 99999999754
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.79 E-value=0.0002 Score=54.78 Aligned_cols=75 Identities=9% Similarity=0.227 Sum_probs=63.2
Q ss_pred CCceeEEEcCCeEEEEEECC-CCCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCE
Q 028809 103 RPRWAAKVTKDALNLSVDMP-GLAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGV 181 (203)
Q Consensus 103 ~p~~di~E~~~~y~i~vdLP-Gv~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGv 181 (203)
.|.+.|.++.+.+.|.+.|| |+++++|+|.+..+.|.|.+.. . . .-...|...| +++.....+++|.
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g---------~-~-~~~~~L~~~I-~~e~S~w~i~~~k 71 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQG---------E-I-VIDGELLHEV-DVSSLWWVINGDV 71 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETT---------E-E-EEEEEBSSCE-EEEEEEEEEETTE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECC---------E-e-eEcccccccc-ccccCEEEEeCCE
Confidence 47799999999999999996 8999999999999999998741 1 2 3446799999 9999999999999
Q ss_pred EEEEEecc
Q 028809 182 LKLTLPMM 189 (203)
Q Consensus 182 L~I~lPK~ 189 (203)
|.|+|-|.
T Consensus 72 v~i~L~K~ 79 (131)
T 2o30_A 72 VDVNVTKK 79 (131)
T ss_dssp EEEEEEES
T ss_pred EEEEEEEC
Confidence 99999997
No 24
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.77 E-value=0.00018 Score=54.62 Aligned_cols=78 Identities=17% Similarity=0.126 Sum_probs=67.6
Q ss_pred ceeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEEE
Q 028809 105 RWAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLKL 184 (203)
Q Consensus 105 ~~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I 184 (203)
.++++++.+.+.|++.+|+. ++++|.+..+.|.+++.... ....|.-.+.|-..| +++..+.++.++.+.|
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~------~~~~y~~~l~L~~~I-~~e~S~~~v~~~kiei 75 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGS------DNFKHLNEIDLFHCI-DPNDSKHKRTDRSILC 75 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETT------TTEEEEEEEEBSSCE-EEEEEEEEECSSCEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCC------CCceEEEEEEcccee-ccccCEEEECCCEEEE
Confidence 79999999999999999995 79999999999999986421 123688889999999 9999999998899999
Q ss_pred EEeccCC
Q 028809 185 TLPMMKE 191 (203)
Q Consensus 185 ~lPK~~~ 191 (203)
+|.|.++
T Consensus 76 ~L~K~~~ 82 (125)
T 1ejf_A 76 CLRKGES 82 (125)
T ss_dssp EEEESST
T ss_pred EEEECCC
Confidence 9999753
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.67 E-value=0.00044 Score=54.62 Aligned_cols=78 Identities=15% Similarity=0.224 Sum_probs=66.8
Q ss_pred CCCceeEEEcCCeEEEEEECC-CCCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECC
Q 028809 102 LRPRWAAKVTKDALNLSVDMP-GLAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNG 180 (203)
Q Consensus 102 ~~p~~di~E~~~~y~i~vdLP-Gv~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nG 180 (203)
..|.+.|.++.+.+.|.|.|| |+++++|+|.+..+.|.|.... . .+ -...|...| +++.....+++|
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg---------~-~~-l~g~L~~~I-~~eeS~w~i~~~ 79 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG---------R-EI-LKGKLFDST-IADEGTWTLEDR 79 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT---------E-EE-EEEEBSSCB-CGGGCEEEEECC
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC---------E-EE-Eeecccccc-CccccEEEEcCC
Confidence 357899999999999999998 8999999999999999998741 1 22 456799999 999999999988
Q ss_pred E-EEEEEeccCC
Q 028809 181 V-LKLTLPMMKE 191 (203)
Q Consensus 181 v-L~I~lPK~~~ 191 (203)
. |.|+|-|..+
T Consensus 80 k~v~I~L~K~~~ 91 (157)
T 2rh0_A 80 KMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEEEEBSSC
T ss_pred cEEEEEEEEcCC
Confidence 5 9999999754
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.40 E-value=0.00047 Score=54.16 Aligned_cols=78 Identities=21% Similarity=0.311 Sum_probs=66.6
Q ss_pred CCceeEEEcCCeEEEEEECCCCCCCceEEEEE-CCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCE
Q 028809 103 RPRWAAKVTKDALNLSVDMPGLAKEDVRVSLE-QNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGV 181 (203)
Q Consensus 103 ~p~~di~E~~~~y~i~vdLPGv~kedI~V~v~-~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGv 181 (203)
.|.++|+++.+.++|+|.+|++ ++++|.+. .+.|.+++... ....|.-.+.|=..| +++ .+.+.....
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~-------~~~~y~~~l~L~~~I-dpe-S~~~v~~~k 72 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGA-------QGERFEFSLELYGKI-MTE-YRKNVGLRN 72 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETT-------TTEEEEEEEEBSSCE-EEE-EEEEEESSS
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcC-------CCceEEEEeEhhhcc-ccc-ceEEecCCE
Confidence 5789999999999999999997 58999999 78999998711 124788889999999 999 888888888
Q ss_pred EEEEEeccCC
Q 028809 182 LKLTLPMMKE 191 (203)
Q Consensus 182 L~I~lPK~~~ 191 (203)
+.|+|.|.++
T Consensus 73 Iei~L~K~e~ 82 (150)
T 2kmw_A 73 IIFSIQKEER 82 (150)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999999753
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.00011 Score=56.61 Aligned_cols=84 Identities=18% Similarity=0.303 Sum_probs=61.9
Q ss_pred CCceeEEEcCCe-------EEEEEECCCCCCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEE
Q 028809 103 RPRWAAKVTKDA-------LNLSVDMPGLAKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKA 175 (203)
Q Consensus 103 ~p~~di~E~~~~-------y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A 175 (203)
.|.+.+.++.+. +.|+|.+|++. +++|.+..+.|.+++....... ......|.-.+.|...| +++..+.
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g-~~~~~~y~~~l~L~~~I-dpe~S~~ 81 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHVG-DENVHHYQLHIDLYKEI-IPEKTMH 81 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC--------CEEBCEEEECSSCC-CSSSEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEecccccC-CccCceEEEEEEChhhc-cccccEE
Confidence 567888888776 99999999974 8889999999999976421000 00123688889999999 9999999
Q ss_pred EEECCE-EEEEEeccC
Q 028809 176 EMKNGV-LKLTLPMMK 190 (203)
Q Consensus 176 ~~~nGv-L~I~lPK~~ 190 (203)
.+.++. |.|+|.|.+
T Consensus 82 ~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKD 97 (134)
T ss_dssp EECCC--CEEEEEECS
T ss_pred EECCCEEEEEEEEECC
Confidence 999998 999999976
No 28
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=82.83 E-value=5.6 Score=28.13 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=29.0
Q ss_pred eEEEEEECC-CCCCCceEEEEECCEEEEEEeecCc
Q 028809 114 ALNLSVDMP-GLAKEDVRVSLEQNTLVIKGKGGKE 147 (203)
Q Consensus 114 ~y~i~vdLP-Gv~kedI~V~v~~~~L~I~g~~~~~ 147 (203)
.|.-.+.|| +++.+.|+-.+++|.|+|+..+...
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 455678899 5899999999999999999987654
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=69.65 E-value=11 Score=25.61 Aligned_cols=34 Identities=18% Similarity=0.442 Sum_probs=29.2
Q ss_pred eEEEEEEECCCCCCCCcceEEEEECCEEEEEEeccC
Q 028809 155 RRYTIRIELPEKIFKTDQIKAEMKNGVLKLTLPMMK 190 (203)
Q Consensus 155 ~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lPK~~ 190 (203)
..|.-.+.||. + +.+.|+-.+++|.|+|..-+..
T Consensus 7 ~~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVNH-F-APDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECTT-T-CCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECCC-C-ChHHEEEEEECCEEEEEEEEcc
Confidence 37888999997 4 8999999999999999987653
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=69.57 E-value=8.8 Score=26.70 Aligned_cols=33 Identities=9% Similarity=0.164 Sum_probs=28.9
Q ss_pred CeEEEEEECCC-CCCCceEEEEECCEEEEEEeec
Q 028809 113 DALNLSVDMPG-LAKEDVRVSLEQNTLVIKGKGG 145 (203)
Q Consensus 113 ~~y~i~vdLPG-v~kedI~V~v~~~~L~I~g~~~ 145 (203)
+.|.-++.||. ++.+.|+-.+++|.|+|+..+.
T Consensus 64 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 64 GSFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp EEEEEEEECCTTBCTTSCEEEEETTEEEEEEEBC
T ss_pred eEEEEEEECCCCcChHHeEEEEeCCEEEEEEecC
Confidence 46888899995 8999999999999999998754
No 31
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=69.08 E-value=7.9 Score=27.37 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=29.0
Q ss_pred EEEEEECC-CCCCCceEEEE-ECCEEEEEEeecCc
Q 028809 115 LNLSVDMP-GLAKEDVRVSL-EQNTLVIKGKGGKE 147 (203)
Q Consensus 115 y~i~vdLP-Gv~kedI~V~v-~~~~L~I~g~~~~~ 147 (203)
|.-++.|| +++.+.|+-.+ ++|.|+|+..+...
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~~~ 90 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEGVLSIQATPASA 90 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTSEEEEEECBCCC
T ss_pred EEEEEECCCCcChhHCEEEECCCCEEEEEEECCCc
Confidence 88899999 78999999999 79999999886543
No 32
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=67.50 E-value=38 Score=25.66 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=26.9
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEeccC
Q 028809 156 RYTIRIELPEKIFKTDQIKAEMKNGVLKLTLPMMK 190 (203)
Q Consensus 156 ~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lPK~~ 190 (203)
.|.-.+.||. + +.++|+-++++|.|+|+.-+..
T Consensus 67 ~~~v~~dlPG-~-~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 67 HIKVIAWLPG-V-NKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEEECTT-C-CGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEEECCC-C-ChHhEEEEEECCEEEEEEEEcc
Confidence 4455557886 5 8999999999999999987765
No 33
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=67.40 E-value=15 Score=26.35 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=30.9
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCE---EEEEEec
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGV---LKLTLPM 188 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGv---L~I~lPK 188 (203)
|+.|+|+++++.++|+|.+. .. +..|+. ..|+...+++. |.|..+.
T Consensus 20 P~gV~V~i~~~~VtVKGPkG----------~L--~~~~~h-----~~v~i~~e~~~~~~i~v~~~~ 68 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPRG----------TL--RRDFNH-----INVELSLLGKKKKRLRVDKWW 68 (100)
T ss_dssp CSSCEEEEETTEEEEEETTE----------EE--EEECCS-----SCCEEEEECSSSCEEEEECCS
T ss_pred CCCCEEEEeCCEEEEECCCc----------eE--EEEecc-----CcEEEEEcCCceeEEEEEccC
Confidence 47889999999999999753 22 234451 12556677776 7776554
No 34
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=66.71 E-value=9.4 Score=27.26 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=29.9
Q ss_pred EEEEEECC-CCCCCceEEEE-ECCEEEEEEeecCcC
Q 028809 115 LNLSVDMP-GLAKEDVRVSL-EQNTLVIKGKGGKED 148 (203)
Q Consensus 115 y~i~vdLP-Gv~kedI~V~v-~~~~L~I~g~~~~~~ 148 (203)
|.=++.|| +++.+.|+-.+ ++|.|+|+..+....
T Consensus 57 F~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~~ 92 (106)
T 3l1e_A 57 FHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPSG 92 (106)
T ss_dssp EEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCCC
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEEccCcc
Confidence 77789999 79999999999 899999999876543
No 35
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=61.04 E-value=16 Score=27.69 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=28.2
Q ss_pred eEEEEEECC-CCCCCceEEEEECCEEEEEEeecC
Q 028809 114 ALNLSVDMP-GLAKEDVRVSLEQNTLVIKGKGGK 146 (203)
Q Consensus 114 ~y~i~vdLP-Gv~kedI~V~v~~~~L~I~g~~~~ 146 (203)
.|.-.+.|| +++.+.|+-.+++|.|+|+..+..
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETTEEEEEEECCC
T ss_pred EEEEEEECCCCccccceEEEEECCEEEEEEEccC
Confidence 466678898 689999999999999999997654
No 36
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=60.08 E-value=10 Score=30.21 Aligned_cols=46 Identities=17% Similarity=0.262 Sum_probs=32.2
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEec
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLKLTLPM 188 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lPK 188 (203)
|+.|+|+++++.++++|.+. ...+.|. +.. ++...++|.|.|..+.
T Consensus 9 P~gV~v~i~~~~vtVkGpkG----------~L~~~~~-~~~------v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNG----------SVTRRLW-YPD------IDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEEEECC-CTT------CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCCe----------EEEEEEE-CCe------EEEEEECCEEEEEcCC
Confidence 47899999999999999753 3333331 333 4556789998887664
No 37
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=58.13 E-value=20 Score=24.59 Aligned_cols=32 Identities=9% Similarity=0.369 Sum_probs=28.2
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEecc
Q 028809 156 RYTIRIELPEKIFKTDQIKAEMKNGVLKLTLPMM 189 (203)
Q Consensus 156 ~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lPK~ 189 (203)
.|.-.+.||. + +.+.|+-.+++|.|+|..-+.
T Consensus 7 ~~~v~~dlPG-~-~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 7 RFSVNLDVKH-F-SPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CEEEEEECTT-S-CGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECCC-C-cHHHeEEEEECCEEEEEEEEe
Confidence 6888899995 5 899999999999999998764
No 38
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=57.67 E-value=12 Score=25.42 Aligned_cols=17 Identities=35% Similarity=0.364 Sum_probs=13.2
Q ss_pred cceEEEEECCEEEEEEe
Q 028809 171 DQIKAEMKNGVLKLTLP 187 (203)
Q Consensus 171 d~i~A~~~nGvL~I~lP 187 (203)
..|.|.|+||||+--=|
T Consensus 3 k~IeAiYEnGVfkPLe~ 19 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQK 19 (69)
T ss_dssp CCEEEEEETTEEEESSC
T ss_pred ceEEEEEECCEEeECCc
Confidence 45999999999975433
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=56.50 E-value=34 Score=27.00 Aligned_cols=45 Identities=24% Similarity=0.419 Sum_probs=32.6
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEec
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLKLTLPM 188 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lPK 188 (203)
|+.|+|+++++.++|+|.+. ...+ .|+.. ++...+||.|.|..+.
T Consensus 11 P~gV~V~i~~~~VtVkGpkG----------~L~~--~~~~~------v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPKG----------ELTR--TFHPD------MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEEE--ECCTT------CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCCe----------EEEE--EcCCC------EEEEEeCCEEEEEcCC
Confidence 47889999999999999743 3334 34544 4456789998888664
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=51.89 E-value=19 Score=29.45 Aligned_cols=46 Identities=17% Similarity=0.286 Sum_probs=32.6
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEecc
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLKLTLPMM 189 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lPK~ 189 (203)
|+.|+|+++++.++|+|.+. ...+ .|+.. |+...+||.|.|..+..
T Consensus 39 P~gV~V~i~~~~VtVKGPkG----------~L~~--~~~~~------v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPKG----------ELTV--PYNTE------LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCCE----------EEEE--ECCCC------eEEEEECCEEEEEcCCC
Confidence 46889999999999999753 3333 33443 45567899988886643
No 41
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=51.21 E-value=18 Score=28.38 Aligned_cols=32 Identities=16% Similarity=0.323 Sum_probs=27.0
Q ss_pred EEEEEECC-CCCCCceEEEE-ECCEEEEEEeecC
Q 028809 115 LNLSVDMP-GLAKEDVRVSL-EQNTLVIKGKGGK 146 (203)
Q Consensus 115 y~i~vdLP-Gv~kedI~V~v-~~~~L~I~g~~~~ 146 (203)
|.=++.|| +++.+.|+-.+ ++|.|+|+..+..
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~ 151 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQ 151 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTTSCEEEEEECC-
T ss_pred EEEEEECCCCcChhHeEEEEcCCCEEEEEEECCC
Confidence 55678898 79999999999 7999999998643
No 42
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=49.14 E-value=19 Score=28.83 Aligned_cols=46 Identities=15% Similarity=0.270 Sum_probs=32.0
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEE--ECCEEEEEEec
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEM--KNGVLKLTLPM 188 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~--~nGvL~I~lPK 188 (203)
|+.|+|+++++.++|+|.+. .-.+ .++. ..++-.+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG----------~L~~--~~~~-----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPRG----------KLTR--NFKH-----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEEE--ECCC-----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCCEEEEECCCc----------eEEE--EccC-----CcEEEEEEcCCCEEEEEECC
Confidence 57899999999999999753 3333 3432 1255556 78988888653
No 43
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=49.08 E-value=17 Score=28.97 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=31.2
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEe
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLKLTLP 187 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lP 187 (203)
|+.|+|+++++.++|+|.+. .-.+. ++. ..++-..+++.|.|..+
T Consensus 14 P~gV~v~i~~~~V~VkGpkG----------~L~~~--~~~-----~~v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPKG----------ELERE--FFW-----PGIQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSEEEEECSSC----------EEEEE--CCC-----TTCEEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcCCe----------EEEEE--ecC-----CcEEEEEeCCEEEEEEC
Confidence 47899999999999999753 33333 331 11455678998888753
No 44
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=48.51 E-value=22 Score=25.18 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=30.5
Q ss_pred CCeEEEEEECCC-CCCCceEEEEECCEEEEEEeecC
Q 028809 112 KDALNLSVDMPG-LAKEDVRVSLEQNTLVIKGKGGK 146 (203)
Q Consensus 112 ~~~y~i~vdLPG-v~kedI~V~v~~~~L~I~g~~~~ 146 (203)
+..|.+.++|++ +++++....+.++.|.|.-.+.+
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcCC
Confidence 568999999998 79999999999999999987653
No 45
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=47.01 E-value=21 Score=28.24 Aligned_cols=44 Identities=18% Similarity=0.468 Sum_probs=31.5
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEEEEEe
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLKLTLP 187 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lP 187 (203)
|+.|+|+++++.++|+|.+. .-.+ .|+..+ +-..+++.|.|..+
T Consensus 12 P~gV~v~i~~~~v~VkGpkG----------~L~~--~~~~~v------~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKG----------ELEV--PVSPEM------RVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSSC----------EEEE--ECCTTS------EEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCCc----------EEEE--EeCCCE------EEEEECCEEEEEEC
Confidence 57899999999999999753 3333 345443 44568998888753
No 46
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=46.39 E-value=47 Score=23.86 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=27.2
Q ss_pred EEEEEEECCCCCCCCcceEEEEEC-CEEEEEEeccCC
Q 028809 156 RYTIRIELPEKIFKTDQIKAEMKN-GVLKLTLPMMKE 191 (203)
Q Consensus 156 ~F~r~~~LP~~v~d~d~i~A~~~n-GvL~I~lPK~~~ 191 (203)
.|.-.+.||. + +.++|+-.+.+ |.|+|..-+..+
T Consensus 35 ~~~v~~~lPG-~-~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLAG-F-NKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECCS-C-CGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECCC-C-CHHHEEEEEeCCCEEEEEEEEecc
Confidence 4455557996 5 89999999999 999999987643
No 47
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=44.52 E-value=48 Score=26.36 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=24.6
Q ss_pred eeEEEcCC-eEEEEEECCCCCCCceEEEEECCEEEEEEee
Q 028809 106 WAAKVTKD-ALNLSVDMPGLAKEDVRVSLEQNTLVIKGKG 144 (203)
Q Consensus 106 ~di~E~~~-~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~ 144 (203)
+.+.+.++ .+.|+++-+.---+.|++.+++++|.|.-+.
T Consensus 32 V~l~qg~~~~~~V~i~g~~nl~~~i~~~v~~g~L~I~~~~ 71 (221)
T 3pet_A 32 IYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSIDK 71 (221)
T ss_dssp EEEEECSSSCCEEEEEEEHHHHTTEEEEEETTEEEEEECT
T ss_pred EEEEECCCCcEEEEEEEChhhcceEEEEEECCEEEEEEcC
Confidence 44554442 5666666543334678888888888887663
No 48
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=42.89 E-value=18 Score=24.39 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=29.6
Q ss_pred CCeEEEEEECCC-CCCCceEEEEECCEEEEEEeecC
Q 028809 112 KDALNLSVDMPG-LAKEDVRVSLEQNTLVIKGKGGK 146 (203)
Q Consensus 112 ~~~y~i~vdLPG-v~kedI~V~v~~~~L~I~g~~~~ 146 (203)
+..|.+.++|++ +++++....+.++.|.|.-.+.+
T Consensus 46 ~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 46 EDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp SCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred CcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 357999999988 69999999999999999887653
No 49
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=40.95 E-value=38 Score=27.08 Aligned_cols=46 Identities=24% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEE-EECCEEEEEEec
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAE-MKNGVLKLTLPM 188 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~-~~nGvL~I~lPK 188 (203)
|+.|+|+++++.++|+|.+. .-.+ .++. . .+.-. .++|.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPkG----------~L~~--~~~~-~----~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPRG----------TLTK--NLKH-I----DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEEE--ECTT-T----CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCCe----------EEEE--EccC-C----cEEEEEecCCeEEEEECC
Confidence 57899999999999999753 3333 3443 1 23334 469999888653
No 50
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=35.87 E-value=27 Score=28.73 Aligned_cols=45 Identities=22% Similarity=0.486 Sum_probs=31.1
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEE-EEECCEEEEEEec
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKA-EMKNGVLKLTLPM 188 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A-~~~nGvL~I~lPK 188 (203)
|+.|+|+++++.++|+|.+. ...+ .|+..+ +. ..+||.|.|..+.
T Consensus 54 P~gV~V~i~~~~VtVKGPkG----------~L~~--~~~~~v------~i~~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPLG----------ELAL--TYPREV------ELTKEESGFLRVKKTV 99 (223)
T ss_dssp STTSCEEESSSEEEECCSSC----------CEEE--ECCSSC------EEEECSSSCEEEECSS
T ss_pred CCCCEEEEeCCEEEEECCCe----------EEEE--EcCCCE------EEEEecCCEEEEEcCC
Confidence 46788889999999999753 2223 445544 33 4688988887664
No 51
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=35.11 E-value=20 Score=24.21 Aligned_cols=22 Identities=23% Similarity=0.297 Sum_probs=19.2
Q ss_pred CCCCceEEEEECCEEEEEEeec
Q 028809 124 LAKEDVRVSLEQNTLVIKGKGG 145 (203)
Q Consensus 124 v~kedI~V~v~~~~L~I~g~~~ 145 (203)
|+.+.|.+....|.|+|+|+.-
T Consensus 18 Fd~e~i~L~T~~G~L~IkG~~L 39 (71)
T 2ks0_A 18 FDPKEILLETIQGVLSIKGEKL 39 (71)
T ss_dssp ECSSEEEEEETTEEEEEEEECC
T ss_pred ECCCEEEEEeCceEEEEEcCCc
Confidence 5788999999999999999853
No 52
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=32.57 E-value=24 Score=28.16 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=30.1
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCC-CCCCCcceEEEE-ECCEEEEEEe
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPE-KIFKTDQIKAEM-KNGVLKLTLP 187 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~-~v~d~d~i~A~~-~nGvL~I~lP 187 (203)
|+.|+|+++++.++|+|.+. .-.+ .|+. .+ +-.+ ++|.|.|..+
T Consensus 13 P~gV~v~i~~~~V~VkGPkG----------~L~~--~~~~~~v------~i~~~~~~~l~v~~~ 58 (188)
T 4a17_E 13 PDKVTITAKQRVVEVKGPLG----------TIKR--AFRYASV------DIQKPTADNVKLQIW 58 (188)
T ss_dssp CTTCEEEEETTEEEEEETTE----------EEEE--ECTTSCC------EECCCBTTBCEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCCe----------EEEE--EccCCeE------EEEEccCCeEEEEEC
Confidence 68999999999999999753 3333 3443 23 3334 6788888765
No 53
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=31.60 E-value=95 Score=24.68 Aligned_cols=47 Identities=17% Similarity=0.313 Sum_probs=32.8
Q ss_pred CCCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCE---EEEEEec
Q 028809 125 AKEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGV---LKLTLPM 188 (203)
Q Consensus 125 ~kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGv---L~I~lPK 188 (203)
=|+.|+|+++++.++|+|.+. ...+ .||.. .++...++|. |.|..+.
T Consensus 12 IP~gV~V~i~~~~VtVkGpkG----------~L~~--~~~~~-----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 12 IPENVDITLKGRTVIVKGPRG----------TLRR--DFNHI-----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp CCTTCEEEEETTEEEEEETTE----------EEEE--ECCSS-----SCEEEEETTTTCEEEEECSC
T ss_pred cCCCCEEEEeCCEEEEECCCe----------EEEE--EeCCC-----CEEEEEecCceeEEEEEcCC
Confidence 368899999999999999753 3333 44441 2455678888 8877654
No 54
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=30.20 E-value=76 Score=23.00 Aligned_cols=38 Identities=18% Similarity=0.337 Sum_probs=30.1
Q ss_pred EEEcCCeEEEEEEC-CCCCCCceEEEEECCEEEEEEeecC
Q 028809 108 AKVTKDALNLSVDM-PGLAKEDVRVSLEQNTLVIKGKGGK 146 (203)
Q Consensus 108 i~E~~~~y~i~vdL-PGv~kedI~V~v~~~~L~I~g~~~~ 146 (203)
+.+.++.+.|.+.+ ||-+++.| +.++++.|.|+-....
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEecCC
Confidence 46677889999988 99999887 4577889998876544
No 55
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=29.27 E-value=30 Score=24.96 Aligned_cols=17 Identities=35% Similarity=0.626 Sum_probs=15.0
Q ss_pred ceEEEEECCEEEEEEec
Q 028809 172 QIKAEMKNGVLKLTLPM 188 (203)
Q Consensus 172 ~i~A~~~nGvL~I~lPK 188 (203)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 48899999999999974
No 56
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=27.64 E-value=24 Score=27.86 Aligned_cols=43 Identities=23% Similarity=0.405 Sum_probs=30.7
Q ss_pred CCceEEEEECCEEEEEEeecCcCCCCceeeEEEEEEECCCCCCCCcceEEEEECCEEEEEE
Q 028809 126 KEDVRVSLEQNTLVIKGKGGKEDGDEESVRRYTIRIELPEKIFKTDQIKAEMKNGVLKLTL 186 (203)
Q Consensus 126 kedI~V~v~~~~L~I~g~~~~~~~~e~~~~~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~l 186 (203)
|+.|+|+++++.++|+|.+.. ..+ .|+.. ++-..+++.|.|..
T Consensus 11 P~gV~v~i~~~~V~VkGpkG~----------L~~--~~~~~------v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKINGQVITIKGKNGE----------LTR--TLNDA------VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESSSEEECCBTTBC----------CEE--ECCSS------CEEEEETTEEEEEC
T ss_pred CCCcEEEEeCCEEEEEcCCEE----------EEE--ECCCC------EEEEEeCCEEEEEE
Confidence 578899999999999997542 222 34443 45567899988873
No 57
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=24.89 E-value=72 Score=25.71 Aligned_cols=40 Identities=23% Similarity=0.121 Sum_probs=29.2
Q ss_pred eeEEEcCCeEEEEEECCCCCCCceEEEEECCEEEEEEeec
Q 028809 106 WAAKVTKDALNLSVDMPGLAKEDVRVSLEQNTLVIKGKGG 145 (203)
Q Consensus 106 ~di~E~~~~y~i~vdLPGv~kedI~V~v~~~~L~I~g~~~ 145 (203)
+.+...++.+.|+++.+.--.+.|++.+++++|.|+-+..
T Consensus 34 V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~~ 73 (250)
T 3jx8_A 34 FEYEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKSI 73 (250)
T ss_dssp EEEEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECBC
T ss_pred EEEEECCCCceEEEEECccccceEEEEEECCEEEEEEcCC
Confidence 5555654566666666554468899999999999998754
No 58
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=24.86 E-value=1.1e+02 Score=24.52 Aligned_cols=20 Identities=25% Similarity=0.371 Sum_probs=17.2
Q ss_pred CcceEEEEECCEEEEEEecc
Q 028809 170 TDQIKAEMKNGVLKLTLPMM 189 (203)
Q Consensus 170 ~d~i~A~~~nGvL~I~lPK~ 189 (203)
.+.++.+.++|.|+|.+++.
T Consensus 54 ~~~i~~~v~~g~L~I~~~~~ 73 (250)
T 3jx8_A 54 FDYLVTEVEGGTLKIYPKSI 73 (250)
T ss_dssp GGGEEEEEETTEEEEEECBC
T ss_pred cceEEEEEECCEEEEEEcCC
Confidence 57889999999999999865
No 59
>3lyc_A Putative pectinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: MSE; 2.30A {Parabacteroides distasonis}
Probab=23.37 E-value=93 Score=24.83 Aligned_cols=20 Identities=15% Similarity=0.137 Sum_probs=16.1
Q ss_pred CcceEEEEECCEEEEEEecc
Q 028809 170 TDQIKAEMKNGVLKLTLPMM 189 (203)
Q Consensus 170 ~d~i~A~~~nGvL~I~lPK~ 189 (203)
.+.++.+.++|.|+|..++.
T Consensus 48 ~~~v~~~v~~g~L~I~~~~~ 67 (241)
T 3lyc_A 48 FEKYEFNVENHKLKIRPKKE 67 (241)
T ss_dssp HTTEEEEEETTEEEEEECGG
T ss_pred cceEEEEEECCEEEEEEcCC
Confidence 46788888899999988775
No 60
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=23.02 E-value=48 Score=24.71 Aligned_cols=16 Identities=31% Similarity=0.671 Sum_probs=14.5
Q ss_pred eEEEEECCEEEEEEec
Q 028809 173 IKAEMKNGVLKLTLPM 188 (203)
Q Consensus 173 i~A~~~nGvL~I~lPK 188 (203)
+.+.+.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7899999999999974
No 61
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=22.66 E-value=56 Score=24.13 Aligned_cols=66 Identities=15% Similarity=0.121 Sum_probs=41.7
Q ss_pred CCCCCCCceEEEEECCEEEEEEeecCcCCCC---------ceee-EEEEEEEC-CCC----CC----------CCcceEE
Q 028809 121 MPGLAKEDVRVSLEQNTLVIKGKGGKEDGDE---------ESVR-RYTIRIEL-PEK----IF----------KTDQIKA 175 (203)
Q Consensus 121 LPGv~kedI~V~v~~~~L~I~g~~~~~~~~e---------~~~~-~F~r~~~L-P~~----v~----------d~d~i~A 175 (203)
-|.+.+-.|.|.++++.++++|.-....+.. .... ...-.+.+ |.. .. ....++.
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp~~~~k~aa~~a~~~v~Gv~~~V~d~i~V~~~~~p~~~~a~~~aL~~~~~l~~i~V 81 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFPDEAAKAALMTALNGLLAPGVNVIDQIHVDPVVRSLDFSSAEPVFTASVPIPDFGL 81 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEESCHHHHHHHHHHHHTTCCTTCEEEECCEECTTCCCCCGGGCHHHHHHHTTCTTCEE
T ss_pred CCcccceeEEEEEECCEEEEEEECCCHHHHHHHHHHHHHhcCCCcceEEeEEEcCCCCCccHHHHHHHHHhcCcCCceEE
Confidence 4777888899999999999999976442210 1123 44444443 221 10 0236788
Q ss_pred EEECCEEEEEE
Q 028809 176 EMKNGVLKLTL 186 (203)
Q Consensus 176 ~~~nGvL~I~l 186 (203)
+.++|.++|+-
T Consensus 82 ~V~~g~VtLsG 92 (132)
T 2kgs_A 82 KVERDTVTLTG 92 (132)
T ss_dssp EEEETEEEEEC
T ss_pred EEECCEEEEEE
Confidence 88999887764
No 62
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=22.45 E-value=1.1e+02 Score=22.18 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=23.3
Q ss_pred EEEEEEECCCCCCCCcceEEEEECCEEEEEEe
Q 028809 156 RYTIRIELPEKIFKTDQIKAEMKNGVLKLTLP 187 (203)
Q Consensus 156 ~F~r~~~LP~~v~d~d~i~A~~~nGvL~I~lP 187 (203)
...-.|.||.++ +.+.++..++..-|.|.+.
T Consensus 15 ~V~i~I~lp~~~-~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 15 EINIQFPVTGDA-DSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp EEEEEEECC----CCSCEEEEEETTEEEEEET
T ss_pred EEEEEEECCCCC-CccceEEEEECCEEEEEEC
Confidence 345578899888 8999999999999999873
No 63
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=20.79 E-value=69 Score=23.92 Aligned_cols=17 Identities=24% Similarity=0.462 Sum_probs=15.2
Q ss_pred cceEEEEECCEEEEEEe
Q 028809 171 DQIKAEMKNGVLKLTLP 187 (203)
Q Consensus 171 d~i~A~~~nGvL~I~lP 187 (203)
..+.+.+.+|||+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 56889999999999996
No 64
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=20.30 E-value=54 Score=23.63 Aligned_cols=34 Identities=9% Similarity=0.298 Sum_probs=27.6
Q ss_pred EcCCeEEEEEECCCCCCCceEEEEE-----------CCEEEEEEe
Q 028809 110 VTKDALNLSVDMPGLAKEDVRVSLE-----------QNTLVIKGK 143 (203)
Q Consensus 110 E~~~~y~i~vdLPGv~kedI~V~v~-----------~~~L~I~g~ 143 (203)
+++..|.|.+.||+-.-+.+++.|. .|.|+.+|.
T Consensus 33 ~~~~~Y~itF~~p~~~G~~~ef~v~~~~Y~~L~~Gd~G~Lt~QGT 77 (100)
T 3rd4_A 33 EITHYYQVTFRLTTDDRKDLVLNIDKSSYQNIEPEMKGRLFMQGS 77 (100)
T ss_dssp -CCCEEEEEEEESSSSCEEEEEECCHHHHHTCCTTCEEEEEEETT
T ss_pred CCceEEEEEEEecCCCCCeEEEEECHHHcCCCCCCCEEEEEEeee
Confidence 5678999999999988888888874 268888887
Done!