BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028812
(203 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 35 PALGPSLSSQSNT-NPTRSTMDQ---AELDRVFQMFDHNGDGRISKKELNDSLENLGIYI 90
P+ G + ++ PTR + + AE F +FD +GDG I+ KEL + +LG
Sbjct: 276 PSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP 335
Query: 91 PDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFD 150
+ EL MI +D +GDG +D EF + AF VFD++G+G+I+
Sbjct: 336 TEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 395
Query: 151 ELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 396 ELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 49 PTRSTMDQ-AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
P + T +Q AE F +FD +GDG I+ KEL + +LG + EL MI +D +GD
Sbjct: 301 PDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 360
Query: 108 GCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTV 167
G +D EF + AF VFD++G+G+I+ EL+ V+ +LG K T
Sbjct: 361 GTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTD 418
Query: 168 EDCKRMIMKXXXXXXXXXXYKEFKQMM 194
E+ MI + Y+EF QMM
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 49 PTRSTMDQ-AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
P + T +Q AE F +FD +GDG I+ KEL + +LG + EL MI +D +GD
Sbjct: 301 PDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 360
Query: 108 GCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTV 167
G +D EF + AF VFD++G+G+I+ EL+ V+ +LG K T
Sbjct: 361 GTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTD 418
Query: 168 EDCKRMIMKXXXXXXXXXXYKEFKQMM 194
E+ MI + Y+EF QMM
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +GDG +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 370
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +GDG +D EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 370 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 427
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 428 ADIDGDGQVNYEEFVQMM 445
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +GDG +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMM 145
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELT 96
LG L S T + AE F +FD +GDG I+ KEL + +LG + EL
Sbjct: 259 LGHKLEYNSRDQLTEEQI--AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ 316
Query: 97 QMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVL 156
MI +D +G+G +D EF + AF VFD++G+G+I+ EL+ V+
Sbjct: 317 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 376
Query: 157 GSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
+LG K T E+ MI + Y+EF QMM
Sbjct: 377 TNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 371 TMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 111 DIDEF 115
+ +EF
Sbjct: 438 NYEEF 442
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 111 DIDEF 115
+ +EF
Sbjct: 438 NYEEF 442
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 371
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 372 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 429
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 430 ADIDGDGQVNYEEFVQMM 447
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 379 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 438
Query: 111 DIDEF 115
+ +EF
Sbjct: 439 NYEEF 443
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 378 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 437
Query: 111 DIDEF 115
+ +EF
Sbjct: 438 NYEEF 442
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 394
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 395 ADIDGDGQVNYEEFVQMM 412
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 344 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 403
Query: 111 DIDEF 115
+ +EF
Sbjct: 404 NYEEF 408
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 429 ADIDGDGQVNYEEFVQMM 446
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 274 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 333
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 334 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 391
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 392 ADIDGDGQVNYEEFVQMM 409
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 341 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 400
Query: 111 DIDEF 115
+ +EF
Sbjct: 401 NYEEF 405
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ +MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDQMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMM 146
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ QMI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 45 SNTNPTRSTMDQ-AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERID 103
SN + T +Q AE F +FD +GDG I+ KEL + +LG + EL MI +D
Sbjct: 1 SNAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 60
Query: 104 VNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQ 163
+G+G +D EF + AF VFD++G+G+I+ EL+ V+ +LG K
Sbjct: 61 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 119
Query: 164 GRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
T E+ MI + Y+EF QMM
Sbjct: 120 -LTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 126 ADIDGDGQVNYEEFVQMM 143
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 75 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 134
Query: 111 DIDEF 115
+ +EF
Sbjct: 135 NYEEF 139
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMM 146
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMM 145
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 126 ADIDGDGQVNYEEFVQMM 143
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 75 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 134
Query: 111 DIDEF 115
+ +EF
Sbjct: 135 NYEEF 139
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 72 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 129
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 130 ADIDGDGQVNYEEFVQMM 147
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 79 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 138
Query: 111 DIDEF 115
+ +EF
Sbjct: 139 NYEEF 143
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 128 ANIDGDGQVNYEEFVQMM 145
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI +++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMM 146
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 126 ADIDGDGQVNYEEFVQMM 143
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 75 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 134
Query: 111 DIDEF 115
+ +EF
Sbjct: 135 NYEEF 139
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMM 146
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 67 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 124
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 125 ADIDGDGQVNYEEFVQMM 142
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 74 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 133
Query: 111 DIDEF 115
+ +EF
Sbjct: 134 NYEEF 138
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 76 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 133
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 134 ADIDGDGQVNYEEFVQMM 151
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 83 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 142
Query: 111 DIDEF 115
+ +EF
Sbjct: 143 NYEEF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMM 145
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 66 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 123
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 124 ADIDGDGQVNYEEFVQMM 141
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 73 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 132
Query: 111 DIDEF 115
+ +EF
Sbjct: 133 NYEEF 137
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMM 146
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 69 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 126
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 127 ADIDGDGQVNYEEFVQMM 144
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 76 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 135
Query: 111 DIDEF 115
+ +EF
Sbjct: 136 NYEEF 140
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
L AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF Q+M
Sbjct: 128 ADVDGDGQVNYEEFVQVM 145
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + +L F++FD +G+G IS EL + NLG + D E+ +MI DV+GDG V
Sbjct: 77 KDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
L AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF Q+M
Sbjct: 128 ADVDGDGQVNYEEFVQVM 145
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + EL F++FD +G+G IS EL + NLG + D E+ +MI DV+GDG V
Sbjct: 77 KDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
L AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 124
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF Q+M
Sbjct: 125 ADVDGDGQVNYEEFVQVM 142
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + EL F++FD +G+G IS EL + NLG + D E+ +MI DV+GDG V
Sbjct: 74 KDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQV 133
Query: 111 DIDEF 115
+ +EF
Sbjct: 134 NYEEF 138
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG + T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG--EXLTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 129 ADIDGDGQVNYEEFVQMM 146
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+G+I+ EL+ V+ +LG + T E+ MI +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG--EXLTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 128 ADIDGDGQVNYEEFVQMM 145
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF MM
Sbjct: 129 ADIDGDGQVNYEEFVTMM 146
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF MM
Sbjct: 129 ADIDGDGQVNYEEFVTMM 146
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 111 DIDEFGALYKS 121
+ +EF + S
Sbjct: 138 NYEEFVTMMTS 148
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF MM
Sbjct: 129 SDIDGDGQVNYEEFVTMM 146
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQV 137
Query: 111 DIDEFGALYKS 121
+ +EF + S
Sbjct: 138 NYEEFVTMMTS 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF MM
Sbjct: 128 ADIDGDGQVNYEEFVTMM 145
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF MM
Sbjct: 128 ADIDGDGQVNYEEFVTMM 145
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 136
Query: 111 DIDEFGALYKS 121
+ +EF + S
Sbjct: 137 NYEEFVTMMTS 147
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ + AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI +
Sbjct: 66 TMM-ARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIRE 122
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF QMM
Sbjct: 123 ANIDGDGQVNYEEFVQMM 140
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D E+ F++FD +G+G IS EL + NLG + D E+ +MI +++GDG V+ +E
Sbjct: 76 DSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEE 135
Query: 115 F 115
F
Sbjct: 136 F 136
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+L AF VFD++G+G I+ EL+ V+ +LG K T ++ MI +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK--LTDDEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF +MM
Sbjct: 128 ADIDGDGHINYEEFVRMM 145
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD +G+G IS EL + NLG + D E+ +MI D++GDG ++ +EF
Sbjct: 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+L AF VFD++G+G I+ EL+ V+ +LG K T ++ MI +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK--LTDDEVDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF +MM
Sbjct: 128 ADIDGDGHINYEEFVRMM 145
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD +G+G IS EL + NLG + D E+ +MI D++GDG ++ +EF
Sbjct: 82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF- 68
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
L AF VFD++G+GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 69 -LTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 125
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF MM
Sbjct: 126 ADIDGDGQVNYEEFVTMM 143
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V+ +EF
Sbjct: 80 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 116 GALYKS 121
+ S
Sbjct: 140 VTMMTS 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
+E F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
L AF VFD++ +GFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIRE 128
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF ++M
Sbjct: 129 ADVDGDGQINYEEFVKVM 146
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + EL F++FD + +G IS EL + NLG + D E+ +MI DV+GDG +
Sbjct: 78 KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQI 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Query: 53 TMDQ-AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVD 111
T DQ +E F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 112 IDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCK 171
EF L AF VFD++ +GFI+ EL+ V+ +LG K T E+
Sbjct: 66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVD 123
Query: 172 RMIMKXXXXXXXXXXYKEFKQMM 194
MI + Y EF ++M
Sbjct: 124 EMIREADVDGDGQINYDEFVKVM 146
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + EL F++FD + +G IS EL + NLG + D E+ +MI DV+GDG +
Sbjct: 78 KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQI 137
Query: 111 DIDEF 115
+ DEF
Sbjct: 138 NYDEF 142
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD + +G IS EL + +LG+ + E+ ++ IDV+G+ ++ EF
Sbjct: 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
AL AF VFD+NGDG I+ ELK VL S+G K
Sbjct: 71 ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 116
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+S + EL F++FD NGDG IS EL L ++G + D E+ M+ + +G G +
Sbjct: 78 KSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEI 136
Query: 111 DIDEFGAL 118
+I +F AL
Sbjct: 137 NIQQFAAL 144
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD + G IS EL + +LG+ + E+ ++ IDV+G+ ++ EF
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
AL AF VFD+NGDG I+ ELK VL S+G K
Sbjct: 71 ALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 116
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD NGDG IS EL L ++G + D E+ +M+ + +G G ++I +F
Sbjct: 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQF 141
Query: 116 GAL 118
AL
Sbjct: 142 AAL 144
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD + +G IS EL + +LG+ + E+ ++ IDV+G+ ++ EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
AL AF VFD+NGDG I+ ELK VL S+G K
Sbjct: 70 ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVEL 95
+S + EL F++FD NGDG IS EL L ++G + D EL
Sbjct: 77 KSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD + +G IS EL + +LG+ + E+ ++ IDV+G+ ++ EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
AL AF VFD+NGDG I+ ELK VL S+G K
Sbjct: 70 ALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+S + EL F++FD NGDG IS EL L ++G + D E+ M+ + +G G +
Sbjct: 77 KSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEI 135
Query: 111 DIDEFGAL 118
+I +F AL
Sbjct: 136 NIQQFAAL 143
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ K+L + +LG + EL MI + +G+G +D +F
Sbjct: 311 AEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFL 370
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VF ++G+G+I+ +L+ V+ +LG K T E+ MI +
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEK--LTDEEVDEMIRE 428
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y++F QMM
Sbjct: 429 AGIDGDGQVNYEQFVQMM 446
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
E F +FD +GDG I+ +EL + +LG + EL M+ ID +G+G VD EF
Sbjct: 10 TEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF VFD++G+GF++ EL+ V+ LG K + E+ MI
Sbjct: 70 GMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKL--SDEEVDEMIRA 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF +++
Sbjct: 128 ADTDGDGQVNYEEFVRVL 145
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T ++ E+ F++FD +G+G +S EL + LG + D E+ +MI D +GDG V
Sbjct: 77 KDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL +LG + EL I +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL 70
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
AF VFD++G+G+I+ EL+ V +LG K T E+ + I +
Sbjct: 71 TXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK--LTDEEVDQXIRE 128
Query: 177 XXXXXXXXXXYKEFKQ 192
Y+EF Q
Sbjct: 129 ADIDGDGQVNYEEFVQ 144
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL NLG + D E+ Q I D++GDG V
Sbjct: 78 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQV 137
Query: 111 DIDEF 115
+ +EF
Sbjct: 138 NYEEF 142
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYK 120
F +FD +GDG I+ +EL + +L + EL MI +D +G+G ++ DEF +L
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 121 SIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXX 180
AF VFD++ +G+I+ EL+ V+ +LG K T E+ ++MI +
Sbjct: 74 KKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEK--LTDEEVEQMIKEADLD 131
Query: 181 XXXXXXYKEFKQMM 194
Y+EF +MM
Sbjct: 132 GDGQVNYEEFVKMM 145
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 47 TNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNG 106
+ T + EL F++FD + +G IS EL + NLG + D E+ QMI+ D++G
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDG 132
Query: 107 DGCVDIDEFGALYKSI 122
DG V+ +EF + ++
Sbjct: 133 DGQVNYEEFVKMMMTV 148
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL +LG + EL I +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
AF VFD++G+G+I+ EL+ V +LG K T E+ I +
Sbjct: 70 TXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK--LTDEEVDEXIRE 127
Query: 177 XXXXXXXXXXYKEFKQ 192
Y+EF Q
Sbjct: 128 ADIDGDGQVNYEEFVQ 143
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL NLG + D E+ + I D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD +GDG I+ KEL +LG + EL I +D +G+G ++ EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFL 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
AF VFD++G+G+I+ EL+ V +LG K T E+ I +
Sbjct: 70 TXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEK--LTDEEVDEXIRE 127
Query: 177 XXXXXXXXXXYKEFKQ 192
Y+EF Q
Sbjct: 128 ADIDGDGQVNYEEFVQ 143
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL NLG + D E+ + I D++GDG V
Sbjct: 77 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQV 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 117 A-LYKSIXXXXXXXXXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
+ + + A F +FD+N DGFI +EL +L + G + T ED + +
Sbjct: 80 VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIEDL 137
Query: 174 IMKXXXXXXXXXXYKEFKQMMKG 196
+ + EF +MM+G
Sbjct: 138 MKDSDKNNDGRIDFDEFLKMMEG 160
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD N DG I +EL + L G ++ + ++ +++ D N DG +D DEF
Sbjct: 95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 116 GALYKSI 122
+ + +
Sbjct: 155 LKMMEGV 161
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 117 A-LYKSIXXXXXXXXXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
+ + + A F +FD+N DGFI +EL +L + G + T ED + +
Sbjct: 80 VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIEDL 137
Query: 174 IMKXXXXXXXXXXYKEFKQMMKG 196
+ + EF +MM+G
Sbjct: 138 MKDSDKNNDGRIDFDEFLKMMEG 160
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD N DG I +EL + L G ++ + ++ +++ D N DG +D DEF
Sbjct: 95 EEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 116 GALYKSI 122
+ + +
Sbjct: 155 LKMMEGV 161
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 17 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 117 A-LYKSIXXXXXXXXXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
+ + + A F +FD+N DGFI +EL +L + G + T ED + +
Sbjct: 77 VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIEDL 134
Query: 174 IMKXXXXXXXXXXYKEFKQMMKG 196
+ + EF +MM+G
Sbjct: 135 MKDSDKNNDGRIDFDEFLKMMEG 157
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD N DG I +EL + L G ++ + ++ +++ D N DG +D DEF
Sbjct: 92 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 151
Query: 116 GALYKSI 122
+ + +
Sbjct: 152 LKMMEGV 158
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 117 AL---YKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
+ F +FD+N DGFI +EL +L + G + T ED + +
Sbjct: 80 VMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATG--EHVTEEDIEDL 137
Query: 174 IMKXXXXXXXXXXYKEFKQMMKG 196
+ + EF +MM+G
Sbjct: 138 MKDSDKNNDGRIDFDEFLKMMEG 160
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL+ F++FD N DG I +EL + L G ++ + ++ +++ D N DG +D DEF
Sbjct: 95 EEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 116 GALYKSI 122
+ + +
Sbjct: 155 LKMMEGV 161
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D A+ +R+F+ FD NGDG+IS EL D+L+ LG PD E+ +M+ ID +GDG + DE
Sbjct: 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFISFDE 67
Query: 115 F 115
F
Sbjct: 68 F 68
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 97 QMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
++ +R D NGDG + E G K++ A D +GDGFI+FDE
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMA--EIDTDGDGFISFDEF 68
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMK 195
F FD NGDG I+ EL L +LG T ++ +RM+ + + EF +
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG---SVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 73
Query: 196 G 196
Sbjct: 74 A 74
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F +FD +G G I KEL ++ LG E+ +MI ID +G G +D +EF
Sbjct: 27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 86
Query: 116 GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIM 175
+ + AF +FD + G IT +L+ V LG + T E+ + MI
Sbjct: 87 LTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG--ENLTEEELQEMIA 144
Query: 176 KXXXXXXXXXXYKEFKQMMK 195
+ EF ++MK
Sbjct: 145 EADRNDDNEIDEDEFIRIMK 164
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 117 A-LYKSIXXXXXXXXXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
+ + + A F +FD+N DGFI +EL +L + G + ED + +
Sbjct: 80 VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATG--EHVIEEDIEDL 137
Query: 174 IMKXXXXXXXXXXYKEFKQMMKG 196
+ + EF +MM+G
Sbjct: 138 MKDSDKNNDGRIDFDEFLKMMEG 160
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD N DG I +EL + L G ++ + ++ +++ D N DG +D DEF
Sbjct: 95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 116 GALYKSI 122
+ + +
Sbjct: 155 LKMMEGV 161
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D+AE +R+F+ FD NGDG+IS EL ++L+ LG PD E+ M+ ID +GDG + E
Sbjct: 7 DKAERERIFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQE 65
Query: 115 F 115
F
Sbjct: 66 F 66
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 93 VELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
E ++ +R D NGDG + E G K++ A D +GDGFI+F E
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMA--EIDTDGDGFISFQEF 66
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEF 190
F FD NGDG I+ EL L +LG T ++ K M+ + ++EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG---SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F FD G G+I+ +EL + LG + EL +I + N +G ++ EF
Sbjct: 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFC 69
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMK 176
+ AF +FD++GDGFI+ EL+ V+ +LG K T E+ MI +
Sbjct: 70 GIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEK--VTDEEIDEMIRE 127
Query: 177 XXXXXXXXXXYKEFKQMM 194
Y+EF M+
Sbjct: 128 ADFDGDGMINYEEFVWMI 145
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
R T + E+ F++FD +GDG IS EL + NLG + D E+ +MI D +GDG +
Sbjct: 77 RETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMI 136
Query: 111 DIDEF 115
+ +EF
Sbjct: 137 NYEEF 141
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F +FD +G G I KEL ++ LG E+ +MI ID +G G +D +EF
Sbjct: 7 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEF 66
Query: 116 GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIM 175
+ + AF +FD + G I+F LK V LG + T E+ + MI
Sbjct: 67 LQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG--ENMTDEELQEMID 124
Query: 176 KXXXXXXXXXXYKEFKQMMK 195
+ +EF ++MK
Sbjct: 125 EADRDGDGEVNEEEFFRIMK 144
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D +L F + D +G G I+K++L LE G+ +P ++++ID +G G +D E
Sbjct: 50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTE 108
Query: 115 FGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQG----RTVEDC 170
F A ++ AF VFD + DG IT EL +L + G K+G R V
Sbjct: 109 FIA--AALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYN-GNKKGNITQRDVNRV 165
Query: 171 KRMIMKXXXXXXXXXXYKEFKQMMK 195
KRMI + EF +MMK
Sbjct: 166 KRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 117 A-LYKSIXXXXXXXXXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
+ + + A F +FD+N DG+I +EL + + G + T E+ + +
Sbjct: 77 VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASG--EHVTDEEIESL 134
Query: 174 IMKXXXXXXXXXXYKEFKQMMKG 196
+ + EF +MM+G
Sbjct: 135 MKDGDKNNDGRIDFDEFLKMMEG 157
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F++FD N DG I +EL + G ++ D E+ +++ D N DG +D DEF
Sbjct: 92 EEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Query: 48 NPTRSTMDQAELDRVFQMFDHNGDGRISKKE----LNDSLENLGIYIPDVELTQMIERID 103
PT+ ELD + + D +G G I +E + ++ + EL ++ D
Sbjct: 49 TPTKE-----ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFD 103
Query: 104 VNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
N DG +D +E ++++ D+N DG I FDE
Sbjct: 104 RNADGYIDAEELAEIFRA-SGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 117 A-LYKSIXXXXXXXXXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
+ + + A F +FD+N DG+I +EL + + G + T E+ + +
Sbjct: 77 VMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASG--EHVTDEEIESL 134
Query: 174 IMKXXXXXXXXXXYKEFKQMMKG 196
+ + EF +MM+G
Sbjct: 135 MKDGDKNNDGRIDFDEFLKMMEG 157
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD N DG I +EL + G ++ D E+ +++ D N DG +D DEF
Sbjct: 92 EEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 10/109 (9%)
Query: 48 NPTRSTMDQAELDRVFQMFDHNGDGRISKKE----LNDSLENLGIYIPDVELTQMIERID 103
PT+ ELD + + D +G G I +E + ++ + EL + D
Sbjct: 49 TPTKE-----ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFD 103
Query: 104 VNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
N DG +D +E ++++ D+N DG I FDE
Sbjct: 104 RNADGYIDAEELAEIFRA-SGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D +L F D G G I+K +L LE G+ +P ++++ID +G G +D E
Sbjct: 53 DVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPP-NFDLLLDQIDSDGSGNIDYTE 111
Query: 115 FGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQG----RTVEDC 170
F L +I AF VFD + DG IT EL VL + G K+G R V
Sbjct: 112 F--LAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFN-GNKRGNITERDVNQV 168
Query: 171 KRMIMKXXXXXXXXXXYKEFKQMMK 195
K+MI + + EF +MMK
Sbjct: 169 KKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA-LYKSIXXXXXXX 129
DG IS KEL + LG EL +MI+ +D +G G VD DEF + +S+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 130 XXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXY 187
+ F +FD+N DG+I +ELK +L + G + T +D + ++ Y
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 188 KEFKQMMKG 196
EF + MKG
Sbjct: 151 DEFLEFMKG 159
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I +EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 116 GALYKSI 122
K +
Sbjct: 154 LEFMKGV 160
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA-LYKSIXXXXXXX 129
DG IS KEL + LG EL +MI+ +D +G G VD DEF + +S+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 130 XXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXY 187
+ F ++D+N DG+I DELK +L + G + T +D + ++ Y
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 188 KEFKQMMKG 196
EF + MKG
Sbjct: 151 DEFLEFMKG 159
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+M+D N DG I EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 94 EEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 116 GALYKSI 122
K +
Sbjct: 154 LEFMKGV 160
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA-LYKSIXXXXXXX 129
DG IS KEL + LG EL +MI+ +D +G G VD DEF + +S+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 130 XXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXY 187
+ F +FD+N DG+I DELK +L + G + T +D + ++ Y
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 188 KEFKQMMKG 196
E+ + MKG
Sbjct: 151 DEWLEFMKG 159
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I EL L+ G I + ++ ++++ D N DG +D DE+
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEW 153
Query: 116 GALYKSI 122
K +
Sbjct: 154 LEFMKGV 160
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA-LYKSIXXXXXXX 129
DG IS KEL + LG EL +MI+ +D +G G VD DEF + +S+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 130 XXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXY 187
+ F +FD+N DG+I +ELK +L + G + T +D + ++ Y
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 188 KEFKQMMKG 196
EF + MKG
Sbjct: 151 DEFLEFMKG 159
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I +EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 116 GALYKSI 122
K +
Sbjct: 154 LEFMKGV 160
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+++R+F+ FD NGDG+IS EL D+L LG D E+ +M+ ID +GDG +D +EF
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 60
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEF 190
F FD NGDG I+ EL L +LG + ++ +RM+ + + EF
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+++R+F+ FD NGDG+IS EL D+L LG D E+ +M+ ID +GDG +D +EF
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 59
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEF 190
F FD NGDG I+ EL L +LG + ++ +RM+ + + EF
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLG---STSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F++FD +G+G ISK+EL ++ +LG +VEL +I+R+D++GDG VD +EF
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVT 96
Query: 118 L 118
L
Sbjct: 97 L 97
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLG 160
AF VFD++G+GFI+ EL + + SLG
Sbjct: 41 AFKVFDRDGNGFISKQELGTAMRSLG 66
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA-LYKSIXXXXXXX 129
DG IS KEL + LG EL +MI+ +D +G G VD DEF + +S+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 130 XXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXY 187
+ F + D+N DG+I DELK +L + G + T +D + ++ Y
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 188 KEFKQMMKG 196
EF + MKG
Sbjct: 151 DEFLEFMKG 159
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+M D N DG I EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 94 EEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 116 GALYKSI 122
K +
Sbjct: 154 LEFMKGV 160
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA-LYKSIXXXXXXX 129
DG IS KEL + LG EL +MI+ +D +G G VD DEF + +S+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 130 XXXXXA--FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXY 187
+ F +FD+N DG+I DELK +L + G + T +D + ++ Y
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 188 KEFKQMMKG 196
E + MKG
Sbjct: 151 DEXLEFMKG 159
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I EL L+ G I + ++ ++++ D N DG +D DE
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEX 153
Query: 116 GALYKSI 122
K +
Sbjct: 154 LEFMKGV 160
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXX--- 127
DG IS KEL + LG EL +MI+ +D +G G VD DEF +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 128 XXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXY 187
F +FD+N DG+I +ELK +L + G + T +D + ++ Y
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDY 150
Query: 188 KEFKQMMKG 196
EF + MKG
Sbjct: 151 DEFLEFMKG 159
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I +EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 116 GALYKSI 122
K +
Sbjct: 154 LEFMKGV 160
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +GDG +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F ++D +GDG I+ KEL + +LG+ + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 117 ALYKSI 122
+ I
Sbjct: 70 TMMARI 75
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF+++D++GDG IT EL +V+ SLGL T + + MI + + EF MM
Sbjct: 15 AFSLYDKDGDGTITTKELGTVMRSLGLNP--TEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 59 LDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
L +F+M D + G I+ EL D L+ +G + + E+ +++ D++ G +D EF A
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 119 YKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXX 178
+ AF+ FD++G G+IT DE++ GL ++D MI +
Sbjct: 72 TVHLNKLEREENLVS-AFSYFDKDGSGYITLDEIQQACKDFGLDDIH-IDD---MIKEID 126
Query: 179 XXXXXXXXYKEFKQMMK 195
Y EF MM+
Sbjct: 127 QDNDGQIDYGEFAAMMR 143
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F +FD +G G I KEL ++ LG E+ +MI ID G G ++ +F
Sbjct: 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDF 64
Query: 116 GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIM 175
+ AF +FD + G I+F LK V LG + T E+ + MI
Sbjct: 65 LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMID 122
Query: 176 KXXXXXXXXXXYKEFKQMMK 195
+ +EF ++MK
Sbjct: 123 EADRDGDGEVSEQEFLRIMK 142
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF MM
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 3 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 62
Query: 111 DIDEF 115
+ +EF
Sbjct: 63 NYEEF 67
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 14 AFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 71
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 61
Query: 111 DIDEF 115
+ +EF
Sbjct: 62 NYEEF 66
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 13 AFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 70
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V+ +EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Score = 40.4 bits (93), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 7 AFRVFDKDGNGYISAAELRHVMTNLGEKL--TDEEVDEMIREADIDGDGQVNYEEFVQMM 64
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V+ +EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 49 PTRSTMDQ---AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVN 105
P R + Q EL F M D + DG I ++L D +LG PD EL M++
Sbjct: 5 PRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC--- 61
Query: 106 GDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
G ++ F L+ AF++FD++G GFI D LK +L ++G
Sbjct: 62 -PGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMG 115
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF-- 115
EL F+ FD + DG I+ ++L + + +G ++EL ++ ++I++N G VD D+F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 116 --GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGS-LGLKQGRTVEDCKR 172
G + AF FD NGDG I+ EL+ + + LG + G D +
Sbjct: 72 LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHR--DIEE 129
Query: 173 MIMKXXXXXXXXXXYKEFKQMM 194
+I ++EF +MM
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMM 151
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENL-GIYIPDVEL 95
+GP L ++ T + EL F+ FD NGDG IS EL +++ L G + ++
Sbjct: 73 MGPKLLAE-----TADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDI 127
Query: 96 TQMIERIDVNGDGCVDIDEF 115
++I +D+NGDG VD +EF
Sbjct: 128 EEIIRDVDLNGDGRVDFEEF 147
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V+ +EF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 11 AFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 68
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD + +G IS EL + NLG + D E+ QMI+ D++GDG V+ +EF
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++ +G+I+ EL+ V+ +LG K T E+ ++MI + Y+EF +MM
Sbjct: 14 AFKVFDKDQNGYISASELRHVMINLGEK--LTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F++FD +G+G IS EL + NLG + D E+ +MI D++GDG V+ +EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G+I+ EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 10 AFRVFDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF-- 115
EL F+ FD + DG I+ ++L + + +G ++EL ++ ++I++N G VD D+F
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 85
Query: 116 --GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGS-LGLKQGRTVEDCKR 172
G + AF FD NGDG I+ EL+ + LG + G D +
Sbjct: 86 LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR--DIEE 143
Query: 173 MIMKXXXXXXXXXXYKEFKQMM 194
+I ++EF +MM
Sbjct: 144 IIRDVDLNGDGRVDFEEFVRMM 165
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENL-GIYIPDVEL 95
+GP L ++ T + EL F+ FD NGDG IS EL +++ L G + ++
Sbjct: 87 MGPKLLAE-----TADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDI 141
Query: 96 TQMIERIDVNGDGCVDIDEF 115
++I +D+NGDG VD +EF
Sbjct: 142 EEIIRDVDLNGDGRVDFEEF 161
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF-- 115
EL F+ FD + DG I+ ++L + + +G ++EL ++ ++I++N G VD D+F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 116 --GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGS-LGLKQGRTVEDCKR 172
G + AF FD NGDG I+ EL+ + LG + G D +
Sbjct: 72 LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR--DIEE 129
Query: 173 MIMKXXXXXXXXXXYKEFKQMM 194
+I ++EF +MM
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMM 151
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENL-GIYIPDVEL 95
+GP L ++ T + EL F+ FD NGDG IS EL +++ L G + ++
Sbjct: 73 MGPKLLAE-----TADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDI 127
Query: 96 TQMIERIDVNGDGCVDIDEF 115
++I +D+NGDG VD +EF
Sbjct: 128 EEIIRDVDLNGDGRVDFEEF 147
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD + +G IS EL + NLG + D E+ QMI+ D++GDG V+ +EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++ +G+I+ EL+ V+ +LG K T E+ ++MI + Y+EF +MM
Sbjct: 9 AFKVFDKDQNGYISASELRHVMINLGEK--LTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD +G+G IS EL + NLG + D E+ +MI D++GDG ++ +EF
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G I+ EL+ V+ +LG K T ++ MI + Y+EF +MM
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNLGEK--LTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ R FQ+FD + G+IS K L + LG + D EL MIE D++GDG ++ +EF A
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIA 156
Query: 118 L 118
+
Sbjct: 157 I 157
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F +FD N DG + EL +++ LG +P E+ +I+ D G + D+F
Sbjct: 22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDF 81
Query: 116 GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMI 174
+ AF +FD + G I+ L+ V LG + T E+ + MI
Sbjct: 82 YIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG--ETLTDEELRAMI 138
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+E F +FD +GDG I+ KEL + +LG + EL MI +D +G+G +D EF
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD++GDG IT EL +V+ SLG Q T + + MI + + EF +M
Sbjct: 15 AFSLFDKDGDGCITTKELGTVMRSLG--QNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 94 ELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELK 153
E + D +GDGC+ E G + +S+ N D +G+G I F E
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDM-INEVDADGNGTIDFPEFL 69
Query: 154 SVLG 157
+++
Sbjct: 70 NLMA 73
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 59 LDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF-GA 117
L R F+ D +G + E L LG+ + E + + D NG G +D++EF A
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSV 155
L + AF D++GDG +T D+L+ V
Sbjct: 99 LRPPM--SQAREAVIAAAFAKLDRSGDGVVTVDDLRGV 134
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 53 TMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDI 112
+DQAE + V + +D NG G + +E +L + + ++D +GDG V +
Sbjct: 69 VLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTV 128
Query: 113 DEFGALY 119
D+ +Y
Sbjct: 129 DDLRGVY 135
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELND-----SLENLGIY-I 90
+ L+SQ T EL +F+ D NGDG++ ++EL D S E + ++ +
Sbjct: 335 MASKLTSQEETK---------ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDL 385
Query: 91 PDVE--LTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFIT 148
P +E + ++ D + +G +D EF + AF FDQ+G+G I+
Sbjct: 386 PQIESEVDAILGAADFDRNGYIDYSEFVTVAMD-RKSLLSKDKLESAFQKFDQDGNGKIS 444
Query: 149 FDELKSVLG 157
DEL SV G
Sbjct: 445 VDELASVFG 453
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGI-YIPDVELTQMIERIDVNGDGC 109
+S + + +L+ FQ FD +G+G+IS EL G+ ++ +MI ID N DG
Sbjct: 420 KSLLSKDKLESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGD 476
Query: 110 VDIDEFGALYKSI 122
VD +EF + + +
Sbjct: 477 VDFEEFCKMIQKL 489
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 54 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDID 113
+ + ++R F+MFD +G G+IS KEL I EL +IE++D N DG VD +
Sbjct: 414 LSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFN 473
Query: 114 EF 115
EF
Sbjct: 474 EF 475
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD + +G IS EL + NLG + D E+ +MI DV+GDG ++ +EF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++ +GFI+ EL+ V+ +LG K T E+ MI + Y+EF ++M
Sbjct: 9 AFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 66
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 59 LDRVFQMFDH-NGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF-- 115
L+ F+ F+ G GR+S ++ LE LGI + Q+I+ D G+G +D D F
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKI 74
Query: 116 -GALY-KSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRM 173
GA + AF ++D+ G+G+I+ D ++ +L L + + ED M
Sbjct: 75 IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAE--LDETLSSEDLDAM 132
Query: 174 IMKXXXXXXXXXXYKEFKQMMKGG 197
I + ++EF +M GG
Sbjct: 133 IDEIDADGSGTVDFEEFMGVMTGG 156
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
Q EL F+++D G+G IS + + L L + +L MI+ ID +G G VD +EF
Sbjct: 90 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 149
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+ T + E+ F++ D +G+G IS EL + NLG + D E+ +MI D++GDG V
Sbjct: 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 111 DIDEF 115
+ +EF
Sbjct: 83 NYEEF 87
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF V D++G+G+I+ EL+ V+ +LG K T E+ MI + Y+EF QMM
Sbjct: 34 AFRVEDKDGNGYISAAELRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEEFVQMM 91
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 93 VELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
EL MI +D +G+G +D EF + AF VFD++G+G+I+ EL
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 153 KSVLGSLG 160
+ V+ +LG
Sbjct: 61 RHVMTNLG 68
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLG 87
+ T + E+ F++FD +G+G IS EL + NLG
Sbjct: 32 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
F+ FD +GDG I+ EL ++ LG +P EL MI DV+ DG V+ +EF +
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF FDQ+GDG IT DEL+ + LG Q E+ MI + Y+EF +M+
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLG--QPLPQEELDAMIREADVDQDGRVNYEEFARML 68
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
+E F++FD G I+K+ L L+ G+ + +M D G+G + EF
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFL 65
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
++ AF FD G G+I L+ L +LG
Sbjct: 66 SMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLG 109
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI 99
+ T + L + F+ FD G G I K L D+L NLG + E + +
Sbjct: 73 KQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLK 162
AF +FD GFIT + L++VL G++
Sbjct: 11 AFELFDSERTGFITKEGLQTVLKQFGVR 38
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENL-GIYIPDVELTQMIERIDVNGDGCVDIDEF 115
EL F+ FD NGDG IS EL +++ L G + ++ ++I +D+NGDG VD +EF
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGS-LGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQM 193
AF FD NGDG I+ EL+ + LG + G D + +I ++EF +M
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLLGHQVGHR--DIEEIIRDVDLNGDGRVDFEEFVRM 69
Query: 194 M 194
M
Sbjct: 70 M 70
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 15/117 (12%)
Query: 52 STMDQAELDRVFQMFDHNGDGRISKKELND-----SLENLGIY-IPDVE--LTQMIERID 103
S + EL +F+ D NGDG++ ++EL D S E + ++ +P +E + ++ D
Sbjct: 58 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 117
Query: 104 VNGDGCVDIDEFGALY---KSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
+ +G +D EF + KS+ AF FDQ+G+G I+ DEL SV G
Sbjct: 118 FDRNGYIDYSEFVTVAMDRKSLLSKDKLES----AFQKFDQDGNGKISVDELASVFG 170
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGI-YIPDVELTQMIERIDVNGDGC 109
+S + + +L+ FQ FD +G+G+IS EL G+ ++ +MI ID N DG
Sbjct: 137 KSLLSKDKLESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGD 193
Query: 110 VDIDEFGALYKSI 122
VD +EF + + +
Sbjct: 194 VDFEEFCKMIQKL 206
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F++FD +G+G IS +L + NLG + D E+ +MI D++GDG V+ ++F
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF VFD++G+G+I+ +L+ V+ +LG K T E+ MI + Y++F QMM
Sbjct: 12 AFRVFDKDGNGYISAADLRHVMTNLGEK--LTDEEVDEMIREADIDGDGQVNYEDFVQMM 69
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
A L F D + G+I+ +EL L+ +G + + E+ + + DV+ G +D EF
Sbjct: 27 AGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFI 86
Query: 117 ALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVE 168
A + AF FD++G G+IT DEL+ G++ R E
Sbjct: 87 AATLHL-NKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEE 137
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
F FD +G G I+ EL + E G+ DV + ++ +D + DG +D +EF A
Sbjct: 104 AFTYFDKDGSGYITPDELQQACEEFGV--EDVRIEELXRDVDQDNDGRIDYNEFVA 157
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F +FD +G G I KEL ++ LG E+ +MI ID +G G +D +EF
Sbjct: 29 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 88
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD +G G I ELK + +LG + + E+ K+MI + ++EF MM
Sbjct: 35 AFDLFDTDGSGTIDAKELKVAMRALGFEPKK--EEIKKMISEIDKDGSGTIDFEEFLTMM 92
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ R FQ+FD + G+IS K L + LG + D EL IE D++GDG ++ +EF A
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIA 156
Query: 118 L 118
+
Sbjct: 157 I 157
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ F +FD N DG + EL + + LG +P E+ +I+ D G D+F
Sbjct: 22 KQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDF 81
Query: 116 GALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ AF +FD + G I+ L+ V LG
Sbjct: 82 YIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG 126
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLK 162
AF++FD N DGF+ + ELK +LG +
Sbjct: 28 AFSLFDXNNDGFLDYHELKVAXKALGFE 55
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD +G G I+ EL +V+ LG Q T E+ +I + ++EF MM
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLG--QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F MFD +G G IS KEL + LG EL +IE +D +G G +D +EF
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF++FD +G G I+ EL +V+ LG Q T E+ +I + ++EF MM
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLG--QNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 71
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 53 TMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDI 112
T ++ FQ+FD + DG++S +EL +L +LG + EL + +++ D+
Sbjct: 1 TASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKE---FDL 57
Query: 113 DEFGALY-KSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCK 171
F +Y K I AF D+ G+G I EL+ +L +LG T + +
Sbjct: 58 ATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG--DALTSSEVE 115
Query: 172 RMIMKXXXXXXXXXXYKEFKQMMKGG 197
++ + Y+ F M+ G
Sbjct: 116 ELMKEVSVSGDGAINYESFVDMLVTG 141
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 49 PTRSTMDQA-ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
P ++ +Q+ E+ F+ D G+G I + EL L NLG + E+ ++++ + V+GD
Sbjct: 67 PIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGD 126
Query: 108 GCVDIDEF 115
G ++ + F
Sbjct: 127 GAINYESF 134
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E F M D N DG I K++L+D L ++G D L M+ G ++ F
Sbjct: 8 EFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLT 63
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF FD+ GFI D L+ +L ++G + T E+ M +
Sbjct: 64 MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDR--FTDEEVDEMYREA 121
Query: 178 XXXXXXXXXYKEFKQMMKGGG 198
Y EF +++K G
Sbjct: 122 PIDKKGNFNYVEFTRILKHGA 142
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
AE F +FD + +G IS EL + +LG+ + E+ ++ IDV+G+ ++ EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 117 AL 118
AL
Sbjct: 70 AL 71
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGL 161
AF +FD++ +G I+ EL +V+ SLGL
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGL 41
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Query: 50 TRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGC 109
R D EL F+ D +G G IS ELN +L + G+ +++ D N G
Sbjct: 20 ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79
Query: 110 VDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
+ DEF L+ I F D +GDG + +E+++ L S G +
Sbjct: 80 ITFDEFKDLHHFI-------LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQ 125
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 63 FQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
F+ D +GDGR+ E+ +L + G + + ++ + D G + D++
Sbjct: 99 FRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F MFD +G G IS K L + LG EL +IE +D +G G +D +EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
AE F MFD +G G IS KEL + LG EL +I +D +G G +D +EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEF 78
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIP--DVELTQMIERIDVNGDGCVDI 112
DQ+ L VFQ D + G IS EL +L N G + P V + +I D V+
Sbjct: 24 DQSFLWNVFQRVDKDRSGVISDNELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNF 82
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
EF ++K I F +D++ G I +ELK L G +
Sbjct: 83 SEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR 125
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 58 ELDRVFQMFDHNGDGRISKKEL-----------NDSLENLGIYIPDVELTQMIERIDVNG 106
EL ++F+ D+NGDG++ +KEL D++ +L + E+ +++ +D +
Sbjct: 315 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 374
Query: 107 DGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
+G ++ EF + AF FD +G G IT +EL + G
Sbjct: 375 NGYIEYSEFVTVCMD-KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 424
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIY-IPDVELTQMIERIDVNGDGCVDIDEFGALYK 120
FQ FD +G G+I+ +EL G+ + D Q+++ D N DG VD +EF + +
Sbjct: 402 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
Query: 121 SI 122
I
Sbjct: 459 KI 460
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 52 STMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVD 111
S+ +AE+D + Q D + +G I E + + + L ++ D +G G +
Sbjct: 356 SSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKIT 415
Query: 112 IDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDE 151
+E G L+ D+N DG + F+E
Sbjct: 416 NEELGRLF---GVTEVDDETWHQVLQECDKNNDGEVDFEE 452
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I +EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 116 GALYKSI 122
K +
Sbjct: 66 LEFMKGV 72
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMK 195
F +FD+N DG+I +ELK +L + G + T +D + ++ Y EF + MK
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 70
Query: 196 G 196
G
Sbjct: 71 G 71
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIP--DVELTQMIERIDVNGDGCVDI 112
DQ+ L VFQ D + G IS EL +L N G + P V + +I D V+
Sbjct: 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
EF ++K I F +D++ G I +ELK L G +
Sbjct: 64 SEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR 106
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIP--DVELTQMIERIDVNGDGCVDI 112
DQ+ L VFQ D + G IS EL +L N G + P V + +I D V+
Sbjct: 23 DQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNF 81
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
EF ++K I F +D++ G I +ELK L G +
Sbjct: 82 SEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR 124
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I +EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 116 GALYKSI 122
K +
Sbjct: 64 LEFMKGV 70
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMK 195
F +FD+N DG+I +ELK +L + G + T +D + ++ Y EF + MK
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 68
Query: 196 G 196
G
Sbjct: 69 G 69
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIP--DVELTQMIERIDVNGDGCVDI 112
DQ+ L VFQ D + G IS EL +L N G + P V + +I D V+
Sbjct: 2 DQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNF 60
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
EF ++K I F +D++ G I +ELK L G +
Sbjct: 61 SEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR 103
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I +EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 116 GALYKSI 122
K +
Sbjct: 74 LEFMKGV 80
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMK 195
F +FD+N DG+I +ELK +L + G + T +D + ++ Y EF + MK
Sbjct: 21 FRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78
Query: 196 G 196
G
Sbjct: 79 G 79
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I +EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 116 GALYKSI 122
K +
Sbjct: 69 LEFMKGV 75
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMK 195
F +FD+N DG+I +ELK +L + G + T +D + ++ Y EF + MK
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 73
Query: 196 G 196
G
Sbjct: 74 G 74
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIP--DVELTQMIERIDVNGDGCVDI 112
DQ+ L VFQ D + G IS EL +L N G + P V + +I D V+
Sbjct: 1 DQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNF 59
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
EF ++K I F +D++ G I +ELK L G +
Sbjct: 60 SEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR 102
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIP--DVELTQMIERIDVNGDGCVDI 112
DQ+ L VFQ D + G IS EL +L N G + P V + +I D V+
Sbjct: 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNF 63
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
EF ++K I F +D++ G I +ELK L G +
Sbjct: 64 SEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGAGYR 106
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
RVF+ FD N DG++S E + Y ++ + E IDV+G+G ++ DEF +
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 58 ELDRVFQMFDHNGDGRISKKEL-----------NDSLENLGIYIPDVELTQMIERIDVNG 106
EL ++F+ D+NGDG++ +KEL D++ +L + E+ +++ +D +
Sbjct: 41 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 100
Query: 107 DGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
+G ++ EF + AF FD +G G IT +EL + G
Sbjct: 101 NGYIEYSEFVTVCMD-KQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIY-IPDVELTQMIERIDVNGDGCVDIDEFGALYK 120
FQ FD +G G+I+ +EL G+ + D Q+++ D N DG VD +EF + +
Sbjct: 128 AFQQFDSDGSGKITNEELG---RLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Query: 121 SI 122
I
Sbjct: 185 KI 186
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 52 STMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVD 111
S+ +AE+D + Q D + +G I E + + + L ++ D +G G +
Sbjct: 82 SSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKIT 141
Query: 112 IDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDE 151
+E G L+ D+N DG + F+E
Sbjct: 142 NEELGRLF---GVTEVDDETWHQVLQECDKNNDGEVDFEE 178
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL +F+MFD N DG I EL L+ G I + ++ ++++ D N DG +D DEF
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 116 GALYKSI 122
K +
Sbjct: 65 LEFMKGV 71
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMK 195
F +FD+N DG+I DELK +L + G + T +D + ++ Y EF + MK
Sbjct: 12 FRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 69
Query: 196 G 196
G
Sbjct: 70 G 70
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ + F++FD + G+IS K L + LG + D EL +MI+ D +GDG V EF
Sbjct: 20 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
Query: 116 GALYKS 121
+ K
Sbjct: 80 LRIMKK 85
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF +FD + G I+F LK V LG + T E+ + MI + +EF ++M
Sbjct: 26 AFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 83
Query: 195 K 195
K
Sbjct: 84 K 84
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
Q EL F+++D G+G IS + + L L + +L MI+ ID +G G VD +EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ + F++FD + G+IS K L + LG + D EL +MI+ D +GDG V EF
Sbjct: 10 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
Query: 116 GALYK 120
+ K
Sbjct: 70 LRIMK 74
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF +FD + G I+F LK V LG + T E+ + MI + +EF ++M
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELG--ENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
Query: 195 K 195
K
Sbjct: 74 K 74
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIY-IPDVELTQMIERIDVNGDGCVDID 113
D+ E+ R F++FD NGDG I E ++ +G + D E+ + ++ D +G+G +DI
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIP 65
Query: 114 EFGALYKS 121
EF L K
Sbjct: 66 EFMDLIKK 73
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLG 160
AF VFD NGDG I FDE K ++ +G
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVG 38
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 94 ELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELK 153
E+ + + D NGDG +D DEF + + + A D++G+G I E
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 154 SVL 156
++
Sbjct: 69 DLI 71
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
F +FD +GDG I+ +EL + +L + EL MI +D +G+G ++ DEF +L
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF +FD++GDG IT +EL +V+ S L Q T E+ + MI + + EF +M
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRS--LDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 103 DVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
D +GDGC+ ++E + +S+ V D +G+G I FDE S++
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEV-DADGNGTIEFDEFLSLMA 73
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
F +FD +GDG I+ +EL + +L + EL MI +D +G+G ++ DEF +L
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
AF +FD++GDG IT +EL +V+ S L Q T E+ + MI + + EF +M
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRS--LDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 103 DVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
D +GDGC+ ++E + +S+ V D +G+G I FDE S++
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNPTEEELQDMISEV-DADGNGTIEFDEFLSLMA 73
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDV--------ELTQMIERIDVNG 106
++ EL +F+ D NGDG++ KKEL + L + ++ E+ +++ +D +
Sbjct: 353 ERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDK 412
Query: 107 DGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
+G ++ EF ++ AFN+FD + G IT +EL ++ G
Sbjct: 413 NGYIEYSEFISVCMD-KQILFSEERLRRAFNLFDTDKSGKITKEELANLFG 462
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIP--DVELTQMIERIDVNGDGCVDI 112
DQ+ L VFQ D + G IS EL +L N G + P V + +I D V+
Sbjct: 2 DQSFLWNVFQRVDKDRSGVISDTELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNF 60
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGL 161
EF ++K I F +D++ G I +ELK L L
Sbjct: 61 SEFTGVWKYI-------TDWQNVFRTYDRDNSGMIDKNELKQALSGYRL 102
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ + F++FD + G+IS K L + LG + D EL + I+ D +GDG V EF
Sbjct: 103 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEF 162
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%)
Query: 49 PTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDG 108
P + + E+ F +FD +G G I KEL + LG E+ + I ID G G
Sbjct: 23 PELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTG 82
Query: 109 CVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ +F + AF +FD + G I+F LK V LG
Sbjct: 83 KXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG 134
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ EL F++FD N DG I +EL + L G ++ + ++ +++ D N DG +D DEF
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Query: 116 GALYKSI 122
+ + +
Sbjct: 69 LKMMEGV 75
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMM 194
F +FD+N DGFI +EL +L + G + ED + ++ + EF +MM
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRATG--EHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
Query: 195 KG 196
+G
Sbjct: 73 EG 74
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 53 TMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDI 112
+ D + + F +FD +G GRI K + D L G E+T++ + VD+
Sbjct: 1 STDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDM 56
Query: 113 DEFGALYKSIX--XXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDC 170
++F + F VFD++ G I EL+ VL SLG K D
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMD- 115
Query: 171 KRMIMKXXXXXXXXXXYKEFKQMM 194
++K Y +F QM+
Sbjct: 116 --ELLKGVPVKDGMVNYHDFVQMI 137
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 48 NPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
P + + E+ F +FD +G G I KEL ++ LG E+ +MI ID G
Sbjct: 22 KPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGT 81
Query: 108 GCVDIDEF 115
G ++ +F
Sbjct: 82 GKMNFGDF 89
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMI 174
AF++FD +G G I ELK + +LG + + E+ K+MI
Sbjct: 36 AFDLFDADGTGTIDVKELKVAMRALGFEPKK--EEIKKMI 73
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D + DG +SK+++ E LG D ELT M++ G ++ F +
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 63
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 64 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 120
Query: 178 XXXXXXXXXYKEFKQMMKGGG 198
Y +F M+KG G
Sbjct: 121 APVEGGKFDYVKFTAMIKGSG 141
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ E+ + F++FD + G I+ K+L + LG + + EL +MI D N D +D DEF
Sbjct: 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 67
Query: 116 GALYK 120
+ K
Sbjct: 68 IRIMK 72
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D + DG +SK+++ E LG D ELT M++ G ++ F +
Sbjct: 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 74
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 75 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 131
Query: 178 XXXXXXXXXYKEFKQMMKGGG 198
Y +F M+KG G
Sbjct: 132 APVEGGKFDYVKFTAMIKGSG 152
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL + LG EL +MI+ +D +G G VD DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQ-MIERIDVNGDGC 109
++ + + L+R F+MFD + G+IS EL G+ D E + ++ +D N DG
Sbjct: 435 KTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGE 491
Query: 110 VDIDEF 115
VD DEF
Sbjct: 492 VDFDEF 497
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLEN----------- 85
+G L+SQ T EL +F D NGDG++ + EL + +
Sbjct: 347 MGSKLTSQDETK---------ELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASM 397
Query: 86 LGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDG 145
L + E+ Q+++ +D + +G ++ EF + AF +FD + G
Sbjct: 398 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMD-RKTLLSRERLERAFRMFDSDNSG 456
Query: 146 FITFDELKSVLG 157
I+ EL ++ G
Sbjct: 457 KISSTELATIFG 468
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQ-MIERIDVNGDGC 109
++ + + L+R F+MFD + G+IS EL G+ D E + ++ +D N DG
Sbjct: 436 KTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGE 492
Query: 110 VDIDEF 115
VD DEF
Sbjct: 493 VDFDEF 498
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLEN----------- 85
+G L+SQ T EL +F D NGDG++ + EL + +
Sbjct: 348 MGSKLTSQDETK---------ELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASM 398
Query: 86 LGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDG 145
L + E+ Q+++ +D + +G ++ EF + AF +FD + G
Sbjct: 399 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMD-RKTLLSRERLERAFRMFDSDNSG 457
Query: 146 FITFDELKSVLG 157
I+ EL ++ G
Sbjct: 458 KISSTELATIFG 469
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI-ERIDVNGDGCVDIDEFGAL 118
+ +F+ D NGDG +S +E+ + + I + +L Q+I + ID +G+G +D +EF
Sbjct: 3 EALFKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 119 YKSIXXXXXXXXXX--XXAFNVFDQNGDGFITFDELKSVLGSLGLKQ 163
Y SI + + D +GDG +T +E+ S G+++
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK 108
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D+ L ++++ D +GDG+++K+E+ + GI ++ + + + D NGDG + ++E
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEE 128
Query: 115 F 115
F
Sbjct: 129 F 129
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 47 TNPTRSTMDQAELDRVFQMFDHNGDGRISKKELND---SLENLGIYIPDVELTQMIERID 103
+ R+ ++ L +F+ D +G+G I + E S++ + + L + + +D
Sbjct: 26 VSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMD 85
Query: 104 VNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
V+GDG + +E + +K D NGDG+IT +E
Sbjct: 86 VDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEF 129
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 98 MIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
+ + IDVNGDG V +E A + S F D +G+G I +E G
Sbjct: 5 LFKEIDVNGDGAVSYEEVKA-FVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 158 SLGLKQGRTVEDCK 171
S+ QG+ + D K
Sbjct: 64 SI---QGQDLSDDK 74
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQ-MIERIDVNGDGC 109
++ + + L+R F+MFD + G+IS EL G+ D E + ++ +D N DG
Sbjct: 412 KTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVSDVDSETWKSVLSEVDKNNDGE 468
Query: 110 VDIDEF 115
VD DEF
Sbjct: 469 VDFDEF 474
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 37 LGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLEN----------- 85
+G L+SQ T EL +F D NGDG++ + EL + +
Sbjct: 324 MGSKLTSQDETK---------ELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASM 374
Query: 86 LGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDG 145
L + E+ Q+++ +D + +G ++ EF + AF +FD + G
Sbjct: 375 LDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMD-RKTLLSRERLERAFRMFDSDNSG 433
Query: 146 FITFDELKSVLG 157
I+ EL ++ G
Sbjct: 434 KISSTELATIFG 445
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI-ERIDVNGDGCVDIDEFGAL 118
+ +F+ D NGDG +S +E+ + + I + +L Q+I + ID +G+G +D +EF
Sbjct: 3 EALFKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 119 YKSIXXXXXXXXXX--XXAFNVFDQNGDGFITFDELKSVLGSLGLKQ 163
Y SI + + D +GDG +T +E+ S G+++
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK 108
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D+ L ++++ D +GDG+++K+E+ + GI ++ + + + D NGDG + ++E
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEE 128
Query: 115 F 115
F
Sbjct: 129 F 129
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 47 TNPTRSTMDQAELDRVFQMFDHNGDGRISKKELND---SLENLGIYIPDVELTQMIERID 103
+ R+ ++ L +F+ D +G+G I + E S++ + + L + + +D
Sbjct: 26 VSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMD 85
Query: 104 VNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
V+GDG + +E + +K D NGDG+IT +E
Sbjct: 86 VDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA-----DANGDGYITLEEF 129
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 98 MIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
+ + IDVNGDG V +E A + S F D +G+G I +E G
Sbjct: 5 LFKEIDVNGDGAVSYEEVKA-FVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 158 SLGLKQGRTVEDCK 171
S+ QG+ + D K
Sbjct: 64 SI---QGQDLSDDK 74
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL + LG EL +MI+ +D +G G VD DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 88 IYIPDV-ELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGF 146
YI D ELT M + ID +G+ VD +EF + F D+NG G
Sbjct: 124 CYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGS 183
Query: 147 ITFDELKSVLGSLGL 161
+TFDE + ++ L
Sbjct: 184 VTFDEFAAWASAVKL 198
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVE-LTQMIERIDVNGDGCVDIDEFG 116
EL +F D +G+ + ++E ++ L + VE + + +D NG G V DEF
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFA 190
Query: 117 ALYKSI 122
A ++
Sbjct: 191 AWASAV 196
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL + LG EL +MI+ +D +G G VD DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 18/123 (14%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALY 119
+ +F +FD + +G I +E L + +L+ E D+N DG + DE +
Sbjct: 66 NHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIV 125
Query: 120 KSIXX-----------XXXXXXXXXXAFNVFDQNGDGFITFDELK-------SVLGSLGL 161
S+ F + D+N DG+IT DE + S++G+L L
Sbjct: 126 ASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNL 185
Query: 162 KQG 164
G
Sbjct: 186 YDG 188
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 91 PDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFD 150
P+ + D + +G + +EF + S AF ++D N DG+ITFD
Sbjct: 61 PEDFANHLFTVFDKDNNGFIHFEEFITVL-STTSRGTLEEKLSWAFELYDLNHDGYITFD 119
Query: 151 ELKSVLGSLGLKQGRTV 167
E+ +++ S+ G V
Sbjct: 120 EMLTIVASVYKMMGSMV 136
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 113 DEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGS 158
++F +YK F VFD++ +GFI F+E +VL +
Sbjct: 46 EDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLST 91
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E FQ+ D + DG ISK ++ + ++LG + EL M+ G ++ F
Sbjct: 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPGPINFTMFLT 113
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
++ AFN+FD+ GDG + LK L + G K
Sbjct: 114 IFGDRIAGTDEEDVIVNAFNLFDE-GDGKCKEETLKRSLTTWGEK 157
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
F +FD GDG+ ++ L SL G E+ Q + ++G+G +DI +F +
Sbjct: 131 AFNLFDE-GDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQI 186
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI--ERIDVNGDGCVDIDE 114
AE FQ+FD GDG+I + D + LG + E+ +++ + D + ++
Sbjct: 7 AEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQ 66
Query: 115 FGALYKSIXXXXXXX--XXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKR 172
F + ++I VFD+ G+G + E++ VL +LG K T E+ ++
Sbjct: 67 FLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM--TEEEVEQ 124
Query: 173 MI 174
++
Sbjct: 125 LV 126
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI--ERIDVNGDGCVDIDEF 115
E F++FD GDG+I + D + LG + E+ +++ + D VD + F
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETF 70
Query: 116 GALYKSIXXXXXXXXXX--XXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
+ +++ F VFD+ G+G + EL+ VL +LG K
Sbjct: 71 LPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEK 119
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 63 FQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
F++FD G+G++ EL L LG + + E+ ++ + + +GC++ + F
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAF 144
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 54 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDID 113
+D+ EL F++ D G I L L++LG + + E+ MI D +G G VD +
Sbjct: 4 LDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYE 63
Query: 114 EFGALYKS 121
EF L S
Sbjct: 64 EFKCLMMS 71
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 58 ELDRVFQMFDHNG-DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
E F +F + DG IS KEL + LG EL +MI+ +D +G G VD DEF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI--ERIDVNGDGCVDIDE 114
AE FQ+FD GDG+I + D + LG + E+ +++ + D + ++
Sbjct: 9 AEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQ 68
Query: 115 FGALYKSIXXXXXXX--XXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKR 172
F + ++I VFD+ G+G + E++ VL +LG K T E+ ++
Sbjct: 69 FLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM--TEEEVEQ 126
Query: 173 MI 174
++
Sbjct: 127 LV 128
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 63 FQMFDHNGDGRISKKELN-----DSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
F+ FD +G+G+IS +EL D +EN I D + +++ +D+NGDG +D EF
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLI---DKAIDSLLQEVDLNGDGEIDFHEF 189
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 59 LDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
L +F D + G +S +E+ D L+ +G ++ Q++ ID N G + +F A
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAA 118
Query: 119 YKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
F FD +G+G I+ +ELK + G
Sbjct: 119 TID-KQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFG 156
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 58 ELDRVFQMFDHNG-DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
E F +F + DG IS KEL + LG EL +MI+ +D +G G VD DEF
Sbjct: 19 EFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL + LG EL +MI+ +D +G G VD DEF
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL + LG EL +MI+ +D +G G VD DEF
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 7/141 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D N DG I +L + +LG D ELT M++ G ++ F +
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 79
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 80 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 136
Query: 178 XXXXXXXXXYKEFKQMMKGGG 198
Y F M+KG G
Sbjct: 137 APVEGGKFDYVRFVAMIKGSG 157
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 7/141 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D N DG I +L + +LG D ELT M++ G ++ F +
Sbjct: 24 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 79
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 80 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 136
Query: 178 XXXXXXXXXYKEFKQMMKGGG 198
Y F M+KG G
Sbjct: 137 APVEGGKFDYVRFVAMIKGSG 157
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 7/141 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D N DG I +L + +LG D ELT M++ G ++ F +
Sbjct: 20 EMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 75
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 76 IFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 132
Query: 178 XXXXXXXXXYKEFKQMMKGGG 198
Y F M+KG G
Sbjct: 133 APVEGGKFDYVRFVAMIKGSG 153
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D + DG +SK+++ E LG D ELT M++ G ++ F +
Sbjct: 7 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 62
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 63 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 119
Query: 178 XXXXXXXXXYKEFKQMMKGG 197
Y +F M+KG
Sbjct: 120 APVEGGKFDYVKFTAMIKGS 139
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D + DG +SK+++ E LG D ELT M++ G ++ F +
Sbjct: 8 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 63
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 64 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 120
Query: 178 XXXXXXXXXYKEFKQMMKG 196
Y +F M+KG
Sbjct: 121 APVEGGKFDYVKFTAMIKG 139
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 21/131 (16%)
Query: 38 GPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLEN-----------L 86
G L+SQ T EL +F D NGDG++ + EL + + L
Sbjct: 325 GSKLTSQDETK---------ELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXL 375
Query: 87 GIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGF 146
+ E+ Q+++ +D + +G ++ EF + AF FD + G
Sbjct: 376 DASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXD-RKTLLSRERLERAFRXFDSDNSGK 434
Query: 147 ITFDELKSVLG 157
I+ EL ++ G
Sbjct: 435 ISSTELATIFG 445
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQ-MIERIDVNGDGC 109
++ + + L+R F+ FD + G+IS EL G+ D E + ++ +D N DG
Sbjct: 412 KTLLSRERLERAFRXFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGE 468
Query: 110 VDIDEF 115
VD DEF
Sbjct: 469 VDFDEF 474
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D + DG +SK+++ E LG D ELT M++ G ++ F +
Sbjct: 5 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLS 60
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD+ + + +K +L ++G + D RM K
Sbjct: 61 IFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 117
Query: 178 XXXXXXXXXYKEFKQMMKG 196
Y +F M+KG
Sbjct: 118 APVEGGKFDYVKFTAMIKG 136
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D+ L ++++ D +GDG+++K+E+ + GI ++ + + + D NGDG + ++E
Sbjct: 3 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEE 58
Query: 115 F 115
F
Sbjct: 59 F 59
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 59 LDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA- 117
++ +F D N +G +S +E+ L ++GI D+ ++++ +D+N G + EF A
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIKKWDI--NRILQALDINDRGNITYTEFMAG 98
Query: 118 --LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVL 156
+K+I AFN D++ DG+I+ ++ S++
Sbjct: 99 CYRWKNIESTFLKA-----AFNKIDKDEDGYISKSDIVSLV 134
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 7/138 (5%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGA 117
E+ F M D N DG I +L + +LG D ELT M++ G ++ F +
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE----APGPLNFTMFLS 58
Query: 118 LYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKX 177
++ AF +FD++ + + +K +L ++G + D RM K
Sbjct: 59 IFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNK---DEMRMTFKE 115
Query: 178 XXXXXXXXXYKEFKQMMK 195
Y F M+K
Sbjct: 116 APVEGGKFDYVRFVAMIK 133
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ FQ+FD G++S +L L LG + D E+ ++++ ++V+ +G +D +F
Sbjct: 87 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 141
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 34/132 (25%)
Query: 48 NPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
+ TR+ D +F +FD G G I+K L D L +G Y P +L Q I +N D
Sbjct: 1 SATRANKD------IFTLFDKKGQGAIAKDSLGDYLRAIG-YNPTNQLVQDI----INAD 49
Query: 108 ---------------GCVDID--EFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFD 150
G ++++ E A K+ AF VFD+ G ++
Sbjct: 50 SSLRDASSLTLDQITGLIEVNEKELDATTKA------KTEDFVKAFQVFDKESTGKVSVG 103
Query: 151 ELKSVLGSLGLK 162
+L+ +L LG K
Sbjct: 104 DLRYMLTGLGEK 115
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 58 ELDRVFQMFD-HNGD-GRISKKELNDSLENLGIYIPD--VELTQMIERIDVNGDGCVDID 113
E+ F++F GD +ISK+EL ++ LG + L +MIE +D NGDG V +
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 114 EFGALYKSI 122
EF + K I
Sbjct: 66 EFLVMMKKI 74
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ FQ+FD G++S +L L LG + D E+ ++++ ++V+ +G +D +F
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL + LG EL +MI+ +D +G G VD DE+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 16/74 (21%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIY--------------IPDVELTQMIER 101
Q +L+ F ++D N DG I+K+E+ D ++ IY P + ++
Sbjct: 137 QEKLNWAFNLYDINKDGYITKEEMLDIMK--AIYDMMGKCTYPVLKEDAPRQHVETFFQK 194
Query: 102 IDVNGDGCVDIDEF 115
+D N DG V IDEF
Sbjct: 195 MDKNKDGVVTIDEF 208
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSL 159
AFN++D N DG+IT +E+ ++ ++
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAI 167
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL + LG EL +MI+ +D +G G VD DE+
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI-ERIDVNGDGCVDIDEFGAL 118
+ +F+ D NGDG +S +E+ + + I + +L Q+I + ID +G+G +D +EF
Sbjct: 3 EALFKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 119 YKSI 122
Y SI
Sbjct: 62 YGSI 65
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 98 MIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
+ + IDVNGDG V +E A + S F D +G+G I +E G
Sbjct: 5 LFKEIDVNGDGAVSYEEVKA-FVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 158 SL 159
S+
Sbjct: 64 SI 65
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 49 PTRSTMDQAELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNG 106
P S + +L VF++FD DG + +L D LGI P E + G
Sbjct: 1 PKLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMG 59
Query: 107 DGCVDIDEFGALYKSIXXXXXXX-XXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ + +EF Y+ + AF FD+ G GFI+ EL+ VL +LG
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 114
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
F+ FD G G IS EL L LG + D ++ ++I+ D+ D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 134
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 49 PTRSTMDQAELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNG 106
P S + +L VF++FD DG + +L D LGI P E + G
Sbjct: 1 PKLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMG 59
Query: 107 DGCVDIDEFGALYKSIXXXXXXX-XXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ + +EF Y+ + AF FD+ G GFI+ EL+ VL +LG
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 114
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
F+ FD G G IS EL L LG + D ++ ++I+ D+ D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 134
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 49 PTRSTMDQAELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNG 106
P S + +L VF++FD DG + ++ D LGI P E + G
Sbjct: 2 PKLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGIN-PRNEDVFAVGGTHKMG 60
Query: 107 DGCVDIDEFGALYKSIXXXXX-XXXXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ + +EF Y+ + AF FD+ G GFI+ EL+ VL LG
Sbjct: 61 EKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLG 115
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD--GCVDIDE 114
A+ F+ FD G G IS EL L LG + D E+ ++I D+ D G V +E
Sbjct: 85 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 144
Query: 115 F 115
F
Sbjct: 145 F 145
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 49 PTRSTMDQAELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNG 106
P S + +L VF++FD DG + ++ D LGI P E + G
Sbjct: 1 PKLSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGIN-PRNEDVFAVGGTHKMG 59
Query: 107 DGCVDIDEFGALYKSIXXXXX-XXXXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ + +EF Y+ + AF FD+ G GFI+ EL+ VL LG
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLG 114
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD--GCVDIDE 114
A+ F+ FD G G IS EL L LG + D E+ ++I D+ D G V +E
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 143
Query: 115 F 115
F
Sbjct: 144 F 144
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 59 LDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
++++F+ FD N DG I E +L + D +L + DV+G+GC+D E +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 119 YKSIXX------XXXXXXXXXXAFNVFDQNGDGFITFDEL 152
K+I F+ D NGDG ++ +E
Sbjct: 114 IKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 49 PTRSTMDQAELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNG 106
P S + +L VF++FD DG + +L D LGI P E + G
Sbjct: 1 PKLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMG 59
Query: 107 DGCVDIDEFGALYKSIXXXXXXX-XXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ + +EF Y+ + AF FD+ G GFI+ EL+ VL LG
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLG 114
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD--GCVDIDEF 115
F+ FD G G IS EL L LG + D E+ ++I D+ D G V +EF
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI---ERIDVNGDGCVDIDEFGA 117
F +FD GD +I+ ++ D LG + E+ +++ + ++N + +EF
Sbjct: 10 EAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLP 68
Query: 118 LYKSIXXXXXXXXXX--XXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
+ ++ VFD+ G+G + EL+ VL +LG K
Sbjct: 69 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 115
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 88 IYIPDV-ELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGF 146
YI D+ ELT M + +D +G +++ EF + FN D NG G
Sbjct: 127 CYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGV 186
Query: 147 ITFDEL 152
+TFDE
Sbjct: 187 VTFDEF 192
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDV-ELTQMIERIDVNGDGCVDIDEF 115
EL +F D +G + +E ++L L + D+ + T + ID NG G V DEF
Sbjct: 134 ELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEF 192
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI---ERIDVNGDGCVDIDEFGA 117
F +FD GD +I+ ++ D LG + E+ +++ + ++N + +EF
Sbjct: 12 EAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLP 70
Query: 118 LYKSIXXXXXXXXXX--XXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
+ ++ VFD+ G+G + EL+ VL +LG K
Sbjct: 71 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 117
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGAL 118
++++ D +GDG+++K+E+ + G ++ I + D NGDG + ++EF A
Sbjct: 80 LYKLMDADGDGKLTKEEVTTFFKKFGYE----KVVDQIMKADANGDGYITLEEFLAF 132
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 36/128 (28%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI-ERIDVNGDGCVDIDEFGA- 117
+ +F+ D NGDG +S +E+ + + I + +L Q+I + ID++G+G +D+ EF
Sbjct: 3 EALFKQLDANGDGSVSYEEVK-AFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
Query: 118 ------------------LYKSIXXXXXXXXXXXXAFNVF---------------DQNGD 144
LYK + F D NGD
Sbjct: 62 AAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKADANGD 121
Query: 145 GFITFDEL 152
G+IT +E
Sbjct: 122 GYITLEEF 129
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 52 STMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVD 111
S + E+ F +FD N G I EL ++ LG + E+ +++ D G+G +
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 112 IDEF 115
D+F
Sbjct: 62 FDDF 65
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGL 161
AF++FD N G I + ELK + +LG
Sbjct: 12 AFDLFDTNKTGSIDYHELKVAMRALGF 38
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 58 ELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+L VF++FD DG + +L D LGI P E + G+ + +EF
Sbjct: 8 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 66
Query: 116 GALYKSIXXXXXXX-XXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
Y+ + AF FD+ G GFI+ EL+ VL +LG
Sbjct: 67 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 112
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
F+ FD G G IS EL L LG + D ++ ++I+ D+ D
Sbjct: 86 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 132
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 58 ELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+L VF++FD DG + +L D LGI P E + G+ + +EF
Sbjct: 7 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 65
Query: 116 GALYKSIXXXXXXX-XXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
Y+ + AF FD+ G GFI+ EL+ VL +LG
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 111
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
F+ FD G G IS EL L LG + D ++ ++I+ D+ D
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 131
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 58 ELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+L VF++FD DG + +L D LGI P E + G+ + +EF
Sbjct: 7 DLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMGEKSLPFEEF 65
Query: 116 GALYKSIXXXXXXX-XXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
Y+ + AF FD+ G GFI+ EL+ VL +LG
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 111
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
F+ FD G G IS EL L LG + D ++ ++I+ D+ D
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 131
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 58 ELDRVFQMFDHNGDGRISKKELN----DSLENLGIYIPDVELTQ----MIERIDVNGDGC 109
E + ++ +D + G I +EL D LE + D +L + M++ D N DG
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 110 VDIDEFGALYK-------SIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
+++ E L AF ++DQ+G+G+I +EL ++L L K
Sbjct: 164 LELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK 223
Query: 163 QGRTVE 168
+ ++
Sbjct: 224 NKQELD 229
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 43 SQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENL-------GIYIPDVEL 95
S + ++ S + ++ ++ FD +G G + KEL + ++ L G+ + E+
Sbjct: 2 SMAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELS-PEM 60
Query: 96 TQMIERIDVNGDGCVDIDEFGALYKSIX--------XXXXXXXXXXXAFNVFDQNGDGFI 147
+++ DG + I E + + + +D + GFI
Sbjct: 61 KTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFI 120
Query: 148 TFDELKSVLGSLGLKQGRTVEDCK 171
+ELK+ L L K +TV+D K
Sbjct: 121 ETEELKNFLKDLLEKANKTVDDTK 144
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 33.5 bits (75), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 53 TMDQAELDRVFQMFDHNGDGRISKKELNDSLENL---GIYIPDVELTQMIERIDVNGDGC 109
M ++ +VF+ D + G I ++EL L++ G + D E ++ D +GDG
Sbjct: 38 AMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGK 97
Query: 110 VDIDEFGAL 118
+ IDEF L
Sbjct: 98 IGIDEFETL 106
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 71 DGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
DG IS KEL LG EL + I+ +D +G G VD DEF
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELND------SLENLGIYIPDVELTQMIERIDVNGDGC 109
+ +L F+++D +G+G I K EL D +L P+ + + +ID+N DG
Sbjct: 92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGE 151
Query: 110 VDIDEF 115
+ ++EF
Sbjct: 152 LTLEEF 157
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 33.1 bits (74), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 35 PALGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLE-NLGIYIPDV 93
P +Q P + +L FQ++D + DG+IS+ E+ L +G+ + +
Sbjct: 92 PVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEE 151
Query: 94 ELTQMIERI----DVNGDGCVDIDEF 115
+L + +R D +GDG V EF
Sbjct: 152 QLENIADRTVQEADEDGDGAVSFVEF 177
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 72 GRISKKELNDSLENLGIYIPDVELTQMIER-IDVNGDGCVDIDEFGALYKSIXXXXXXXX 130
G +S +E N Y + + + R D NGDG +D EF + S+
Sbjct: 41 GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREF-IIALSVTSRGKLEQ 99
Query: 131 XXXXAFNVFDQNGDGFITFDELKSVLGSL 159
AF+++D +G+G+I+ E+ ++ ++
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAI 128
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 50 TRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYI------------PDVELTQ 97
+R ++Q +L F M+D +G+G ISK E+ + ++ + + P+ +
Sbjct: 93 SRGKLEQ-KLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEK 151
Query: 98 MIERIDVNGDGCVDIDEF 115
+ ++D N DG + ++EF
Sbjct: 152 IFRQMDTNRDGKLSLEEF 169
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF---- 115
+ VF+ FD NGDG I +E +L + +L D++G+G + E
Sbjct: 66 EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
Query: 116 GALYKSIXX-------XXXXXXXXXXAFNVFDQNGDGFITFDEL 152
A+YK + F D N DG ++ +E
Sbjct: 126 QAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIY-------IPDVELTQMIERIDVNGDG 108
+AEL+ F+ D NGDG ++ EL + L Y + + ++I+ D N DG
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEAS-AKLIKMADKNSDG 64
Query: 109 CVDIDEF 115
+ +EF
Sbjct: 65 KISKEEF 71
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENL---GIYIPDVELTQMIERIDVNGDGCVDIDE 114
++ + F + D + G I + EL L+N + D E + D +GDG + +DE
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDE 101
Query: 115 FGALYKS 121
F A+ K+
Sbjct: 102 FAAMIKA 108
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 37/107 (34%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKS 121
VF +FD N DGRI E ++ I+ + V G +D
Sbjct: 68 VFNVFDENKDGRI-------------------EFSEFIQALSVTSRGTLD---------- 98
Query: 122 IXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVE 168
AF ++D + DG+IT +E+ ++ ++ G TVE
Sbjct: 99 --------EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVE 137
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 49 PTRSTMDQAELDRVFQMFDHNGDGRISKKELND 81
P + +DR+F M D N DG+++ +E +
Sbjct: 139 PEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 171
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 20/49 (40%)
Query: 108 GCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVL 156
G +D F +YK FNVFD+N DG I F E L
Sbjct: 41 GQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQAL 89
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI---ERIDVNGDGCVDIDEFGA 117
F +FD GD +I+ ++ D + LG + E+ +++ + ++N + +EF
Sbjct: 8 EAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKK-ITFEEFLP 66
Query: 118 LYKSIXXXXXXXXXX--XXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
+ ++ VFD+ G+G + EL+ VL +LG K
Sbjct: 67 MLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEK 113
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 103 DVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVL 156
D N DG ++ DEF A ++ AFN D NG+G ++ DEL + +
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAAE---AFNQVDTNGNGELSLDELLTAV 162
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ M D N DG+I+ E L LG+ E + ++D NG+G + +DE
Sbjct: 107 IVGMCDKNADGQINADEFAAWLTALGM--SKAEAAEAFNQVDTNGNGELSLDEL 158
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 54 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVEL 95
M +AE F D NG+G +S EL ++ + DVEL
Sbjct: 133 MSKAEAAEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVEL 174
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 57 AELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFG 116
A L VF D N GR+ ++E L + D E + +R+D + DG + EF
Sbjct: 27 ARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAE--AVFQRLDADRDGAITFQEFA 84
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLEN----LGIY--------IPDVELTQMIERID 103
+L F ++D N DG I+K+E+ D ++ +G Y P + +++D
Sbjct: 88 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMD 147
Query: 104 VNGDGCVDIDEF 115
N DG V +DEF
Sbjct: 148 KNKDGIVTLDEF 159
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 49 PTRSTMDQAELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNG 106
P S + +L VF++F DG + +L D LGI P E + G
Sbjct: 1 PKLSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGIN-PRNEDVFAVGGTHKMG 59
Query: 107 DGCVDIDEFGALYKSIXXXXXXX-XXXXXAFNVFDQNGDGFITFDELKSVLGSLG 160
+ + +EF Y+ + AF FD+ G GFI+ EL+ VL +LG
Sbjct: 60 EKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALG 114
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 61 RVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
F+ FD G G IS EL L LG + D ++ ++I+ D+ D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQED 134
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKS 121
+F FD +G+G I ++ L L +L D+N DGC+ +E A+ KS
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKS 193
Query: 122 IX-----------XXXXXXXXXXXAFNVFDQNGDGFITFDEL 152
I F D+N DG +T DE
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 103 DVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
D +G+G + ++F + SI AFN++D N DG IT +E+ +++ S+
Sbjct: 139 DADGNGAIHFEDF-VVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDM 197
Query: 163 QGR 165
GR
Sbjct: 198 MGR 200
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLEN----LGIYI--------PDVELTQMIERID 103
+L F ++D N DG I+K+E+ +++ +G + P + + +++D
Sbjct: 164 HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMD 223
Query: 104 VNGDGCVDIDEF 115
N DG V IDEF
Sbjct: 224 RNQDGVVTIDEF 235
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 108 GCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTV 167
G VD D F +Y FN FD +G+G I F++ V+G L +G
Sbjct: 107 GLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDF--VVGLSILLRGTVH 164
Query: 168 EDCK 171
E K
Sbjct: 165 EKLK 168
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ + F + D + G I + EL L+N + D E ++ D +GDG + +DE
Sbjct: 43 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 102
Query: 115 FGALYKS 121
F AL K+
Sbjct: 103 FTALVKA 109
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 12/127 (9%)
Query: 52 STMDQAELD---RVFQMFDHNGDGRISKKELNDSLENLG-IYIPDVELTQMIERIDVNGD 107
S D+ E++ F + D N DG I K +L ++ +G + + + EL MI+
Sbjct: 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----AS 72
Query: 108 GCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGR-T 166
G ++ F ++ AF V D +G G I L+ +L + G GR T
Sbjct: 73 GPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG---GRFT 129
Query: 167 VEDCKRM 173
E+ K M
Sbjct: 130 PEEIKNM 136
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
Query: 58 ELDRVFQMFDHNGDGRIS--------KKELNDSLENLGIYIPDVELTQMIERIDVNGDGC 109
EL +F+ +D GDG++S + E L+ + L ++ E +D NGDG
Sbjct: 6 ELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMST------LDELFEELDKNGDGE 59
Query: 110 VDIDEFGALYKSI 122
V +EF L K I
Sbjct: 60 VSFEEFQVLVKKI 72
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLEN----LGIY--------IPDVELTQMIERID 103
+L F ++D N DG I+K+E+ D ++ +G Y P + +++D
Sbjct: 91 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 150
Query: 104 VNGDGCVDIDEF 115
N DG V +DEF
Sbjct: 151 KNKDGIVTLDEF 162
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLEN----LGIY--------IPDVELTQMIERID 103
+L F ++D N DG I+K+E+ D ++ +G Y P + +++D
Sbjct: 88 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 147
Query: 104 VNGDGCVDIDEF 115
N DG V +DEF
Sbjct: 148 KNKDGIVTLDEF 159
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLEN----LGIY--------IPDVELTQMIERID 103
+L F ++D N DG I+K+E+ D ++ +G Y P + +++D
Sbjct: 124 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 183
Query: 104 VNGDGCVDIDEF 115
N DG V +DEF
Sbjct: 184 KNKDGIVTLDEF 195
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 55 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
+Q E FQ+FD + D +++ +EL + LG +++++++ D + G D +
Sbjct: 12 EQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQET 71
Query: 115 F 115
F
Sbjct: 72 F 72
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLG 160
AF +FD++ D +T +EL +V+ +LG
Sbjct: 19 AFQLFDKDNDNKLTAEELGTVMRALG 44
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ +VF + D + G I ++EL L+N + E + D +GDG + ++E
Sbjct: 42 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
Query: 115 FGALYKS 121
F +L K+
Sbjct: 102 FQSLVKA 108
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ +VF + D + G I ++EL L+N + E + D +GDG + ++E
Sbjct: 43 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Query: 115 FGALYKS 121
F +L K+
Sbjct: 103 FQSLVKA 109
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLGLKQGR 165
AFN++D N DG+IT +E+ +++ S+ GR
Sbjct: 14 AFNLYDINKDGYITKEEMLAIMKSIYDMMGR 44
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLEN----LGIYI--------PDVELTQMIERID 103
+L F ++D N DG I+K+E+ +++ +G + P + + E++D
Sbjct: 8 HEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMD 67
Query: 104 VNGDGCVDIDEF 115
N DG V I+EF
Sbjct: 68 RNQDGVVTIEEF 79
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ + F + D + G I + EL L+ + D E ++ D +GDG + +DE
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDE 102
Query: 115 FGALYKS 121
+ AL K+
Sbjct: 103 WAALVKA 109
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 55 DQAELD---RVFQMFDHNGDGRISKKELNDSLENLG-IYIPDVELTQMIERIDVNGDGCV 110
D+ E++ F + D N DG I K +L ++ +G + + + EL MI+ G +
Sbjct: 2 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPI 57
Query: 111 DIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGR-TVED 169
+ F ++ AF V D +G G I L+ +L + G GR T E+
Sbjct: 58 NFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG---GRFTPEE 114
Query: 170 CKRM 173
K M
Sbjct: 115 IKNM 118
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 58 ELDRVFQMFD--HNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
E+ VF +FD DG + ++ D L LG+ + ++ Q + G+ ++E
Sbjct: 10 EVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKM-GEKAYKLEEI 68
Query: 116 GALYKSIXXXXXXXXXXX--XAFNVFDQNGDGFITFDELKSVLGSLG 160
+Y+ + AF FD+ G G I+ E+++VL LG
Sbjct: 69 LPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG 115
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 30.8 bits (68), Expect = 0.60, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLG 160
AF +FD+N DG+I +EL +L + G
Sbjct: 10 AFRIFDKNADGYIDIEELGEILRATG 35
Score = 27.3 bits (59), Expect = 5.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENLG 87
+ EL F++FD N DG I +EL + L G
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ + F + D + G I + EL L+N + D E ++ D +GDG + +DE
Sbjct: 42 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 115 FGALYKS 121
+ AL K+
Sbjct: 102 WTALVKA 108
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 73 RISKKELNDSLENLGIYIPDVE-----LTQMIERIDVNGDGCVDIDEFGALYKSI 122
++SKKEL D L+ DV+ + ++++ +D NGDG VD EF L ++
Sbjct: 27 KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCV 110
+F +FD G G I+K L D L +G Y P +L Q I +N D +
Sbjct: 9 IFTLFDKKGQGAIAKDSLGDYLRAIG-YNPTNQLVQDI----INADSSL 52
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 71 DGRISKKELNDSLENLGI---YIP-DVELTQ-MIERIDVNGDGCVDIDEFGALYKSIXXX 125
DG + +EL L GI Y P +E + MI +D + G + + F L+ ++
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAW 72
Query: 126 XXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
F DQ+G G + EL+ +G +G +
Sbjct: 73 KEN-------FMTVDQDGSGTVEHHELRQAIGLMGYR 102
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 71 DGRISKKELNDSLENLGI---YIP-DVELTQ-MIERIDVNGDGCVDIDEFGALYKSIXXX 125
DG + +EL L GI Y P +E + MI +D + G + + F L+ ++
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAW 72
Query: 126 XXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLK 162
F DQ+G G + EL+ +G +G +
Sbjct: 73 KEN-------FMTVDQDGSGTVEHHELRQAIGLMGYR 102
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 34/114 (29%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENL-GIYIPDVELTQMIERIDVNGDGCVDIDE 114
+ +L F+++D + DG IS EL L+ + G + D +L Q++++ +N D
Sbjct: 89 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD------- 141
Query: 115 FGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVE 168
++GDG I+F+E +V+G L + + V+
Sbjct: 142 --------------------------KDGDGRISFEEFCAVVGGLDIHKKMVVD 169
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLVKKI 77
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 34/114 (29%)
Query: 56 QAELDRVFQMFDHNGDGRISKKELNDSLENL-GIYIPDVELTQMIERIDVNGDGCVDIDE 114
+ +L F+++D + DG IS EL L+ + G + D +L Q++++ +N D
Sbjct: 88 EQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD------- 140
Query: 115 FGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVE 168
++GDG I+F+E +V+G L + + V+
Sbjct: 141 --------------------------KDGDGRISFEEFCAVVGGLDIHKKMVVD 168
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
VF +FD +G G IS E GI D + + + D++ G +D+DE
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGL 161
F++FD++G G I+ DE K+ G G+
Sbjct: 122 FDIFDKDGSGSISLDEWKTYGGISGI 147
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKI 73
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 34/107 (31%)
Query: 63 FQMFDHNGDGRISKKELNDSLENL-GIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKS 121
F+++D + DG IS EL L+ + G + D +L Q++++ +N D
Sbjct: 82 FRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD-------------- 127
Query: 122 IXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVE 168
++GDG I+F+E +V+G L + + V+
Sbjct: 128 -------------------KDGDGRISFEEFCAVVGGLDIHKKMVVD 155
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D NGDG V +EF L K I
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKI 74
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 34/107 (31%)
Query: 63 FQMFDHNGDGRISKKELNDSLENL-GIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKS 121
F+++D + DG IS EL L+ + G + D +L Q++++ +N D
Sbjct: 81 FRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD-------------- 126
Query: 122 IXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVE 168
++GDG I+F+E +V+G L + + V+
Sbjct: 127 -------------------KDGDGRISFEEFCAVVGGLDIHKKMVVD 154
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D VF +FD +G G I+ E GI + + + + D++ G +D+DE
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKR 172
F++FD++G G IT DE K+ G+ + EDC++
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISP--SEEDCEK 153
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 57 AELDRVFQMFD-HNGD-GRISKKELND--SLENLGIYIPDVELTQMIERIDVNGDGCVDI 112
AEL +F+ + GD ++SK+EL E + L + + +D NGDG V
Sbjct: 7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSF 66
Query: 113 DEFGALYKSI 122
+EF L K I
Sbjct: 67 EEFQVLVKKI 76
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDV---ELTQMIERIDVNGDGCVDIDE 114
++ +VF + D + DG I + EL L+ D+ E ++ D +GDG + ++E
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 115 FGAL 118
F L
Sbjct: 102 FSTL 105
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 136 FNVFDQNGDGFITFDELKSVL 156
F++ D++ DGFI DEL S+L
Sbjct: 47 FHILDKDKDGFIDEDELGSIL 67
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 135 AFNV----FDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEF 190
AF V FD NG+G I LK +L LG+ +T + KR+I + Y +F
Sbjct: 49 AFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVP--KTHLELKRLIREVSSGSEETFSYSDF 106
Query: 191 KQMMKG 196
+MM G
Sbjct: 107 LRMMLG 112
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 63 FQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
+ FD NG+G I L LE LG+ +EL ++I + + +F
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDF 106
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 135 AFNVFDQNGDGFITFDELKSVLGSLG 160
AF V DQN DG I D+L+ ++G
Sbjct: 17 AFTVIDQNRDGIIDKDDLRETFAAMG 42
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDV------ELTQMIERIDVNGDGCVD 111
++ +VF M D + G I + EL L+ + PD E ++ D +GDG +
Sbjct: 43 DVKKVFHMLDKDKSGFIEEDELGFILKG---FSPDARDLSAKETKMLMAAGDKDGDGKIG 99
Query: 112 IDEFGAL 118
+DEF L
Sbjct: 100 VDEFSTL 106
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 90 IPD-VELTQMIERI----DVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGD 144
+PD E TQ +E + D NGD +D E+ A ++ F ++D++ +
Sbjct: 51 VPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAAL-NLVLRGTLEHKLKWTFKIYDKDRN 109
Query: 145 GFITFDELKSVLGSL-GLKQGRTVE 168
G I EL ++ S+ LK+ +VE
Sbjct: 110 GCIDRQELLDIVESIYKLKKACSVE 134
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 18/82 (21%)
Query: 51 RSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENL-----------------GIYIPDV 93
R T++ +L F+++D + +G I ++EL D +E++ + P+
Sbjct: 90 RGTLEH-KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEE 148
Query: 94 ELTQMIERIDVNGDGCVDIDEF 115
+ ++ +D NGDG + ++EF
Sbjct: 149 VVDRIFLLVDENGDGQLSLNEF 170
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 56 QAELDRVFQMF-DHNGDGRISKKELNDSLENLGIYIPDVELTQMIERI----DVNGDGCV 110
+ EL +Q F GRI+++E + P+ + + + D N DG +
Sbjct: 25 EEELSSWYQSFLKECPSGRITRQEFQTIYSK---FFPEADPKAYAQHVFRSFDANSDGTL 81
Query: 111 DIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSL 159
D E+ + + AF+++D +G+G I+ +E+ ++ ++
Sbjct: 82 DFKEY-VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCK 171
F++FD++G G IT DE K+ G+ + EDC+
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCE 152
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D VF +FD +G G I+ E + GI + D++ G +D+DE
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCK 171
F++FD++G G IT DE K+ G+ + EDC+
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCE 152
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D VF +FD +G G I+ E + GI + D++ G +D+DE
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCK 171
F++FD++G G IT DE K+ G+ + EDC+
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCE 152
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D VF +FD +G G I+ E + GI + D++ G +D+DE
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCK 171
F++FD++G G IT DE K+ G+ + EDC+
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCE 152
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D VF +FD +G G I+ E + GI + D++ G +D+DE
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 56 QAELDRVFQMF-DHNGDGRISKKELNDSLENLGIYIPDVELTQMIERI----DVNGDGCV 110
+ EL +Q F GRI+++E + P+ + + + D N DG +
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSK---FFPEADPKAYAQHVFRSFDANSDGTL 80
Query: 111 DIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSL 159
D E+ + + AF+++D +G+G I+ +E+ ++ ++
Sbjct: 81 DFKEY-VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 56 QAELDRVFQMF-DHNGDGRISKKELNDSLENLGIYIPDVELTQMIERI----DVNGDGCV 110
+ EL +Q F GRI+++E + P+ + + + D N DG +
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSK---FFPEADPKAYAQHVFRSFDANSDGTL 80
Query: 111 DIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSL 159
D E+ + + AF+++D +G+G I+ +E+ ++ ++
Sbjct: 81 DFKEY-VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 136 FNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCK 171
F++FD++G G IT DE K+ G+ + EDC+
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQ--EDCE 152
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 60 DRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDE 114
D VF +FD +G G I+ E + GI + D++ G +D+DE
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 56 QAELDRVFQMF-DHNGDGRISKKELNDSLENLGIYIPDVELTQMIERI----DVNGDGCV 110
+ EL +Q F GRI+++E + P+ + + + D N DG +
Sbjct: 24 EEELSSWYQSFLKECPSGRITRQEFQTIYSK---FFPEADPKAYAQHVFRSFDANSDGTL 80
Query: 111 DIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSL 159
D E+ + + AF+++D +G+G I+ +E+ ++ ++
Sbjct: 81 DFKEY-VIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 108 GCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLG 157
G ++ EF +YK FNVFD + +G+I F E L
Sbjct: 41 GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALS 90
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ + F + + G I + EL L+N + D E ++ D +GDG + +DE
Sbjct: 42 DVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 115 FGALYKS 121
+ AL K+
Sbjct: 102 WTALVKA 108
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 150 DELKSVLGSLGLKQGRTVEDCK--RMIMK 176
DE+ SVLG+ LK+G T E+ K +M+MK
Sbjct: 447 DEIFSVLGAPFLKEGATEEEIKLSKMVMK 475
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDV---ELTQMIERIDVNGDGCVDIDE 114
++ +VF + D + G I + EL L+ D+ E ++ D +GDG + ++E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 115 FGAL 118
F L
Sbjct: 102 FSTL 105
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 68 HNGDGR------ISKKELNDSLEN---LGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
H GR +SKKEL + ++ +G + D E+ +++E +D N D V+ E+
Sbjct: 17 HKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEY 73
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ + F D + G I + EL L+ + D E ++ D +GDG + ++E
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 102
Query: 115 FGALYKS 121
+ AL K+
Sbjct: 103 WVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGI---YIPDVELTQMIERIDVNGDGCVDIDE 114
++ + F D + G I + EL L+ + D E ++ D +GDG + ++E
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 101
Query: 115 FGALYKS 121
+ AL K+
Sbjct: 102 WVALVKA 108
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query: 48 NPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMI-----ERI 102
NP ++ + L F+ D N D IS+ E GI+ + L + + + I
Sbjct: 85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDE-------YGIFFGMLGLDKTMAPASFDAI 137
Query: 103 DVNGDGCVDIDEF 115
D N DG + ++EF
Sbjct: 138 DTNNDGLLSLEEF 150
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 58 ELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDV---ELTQMIERIDVNGDGCVDIDE 114
++ +VF + D + G I + EL L+ D+ E ++ D +GDG + ++E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 115 FGAL 118
F L
Sbjct: 102 FSTL 105
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 95 LTQMIERIDVNGDGCVDIDEFGALYKSI 122
L ++ E +D GDG V +EF L K I
Sbjct: 46 LDELFEELDKAGDGEVSFEEFQVLVKKI 73
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Length = 624
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 53 TMDQAE-----LDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGD 107
+MDQ + + + D N D +++ KEL D L+ L I + D ++ D +
Sbjct: 2 SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQT 61
Query: 108 GCVDIDEFGALYK 120
++ +E YK
Sbjct: 62 DSLEDEEIETFYK 74
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 62 VFQMFDHNGDGRISKKELNDSLENL-----GIYIPDVELTQMIERI----DVNGDGCVDI 112
F++FD + DG +++++L+ + L + E+ Q+I+ I D++ DG +++
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 113 DEF 115
EF
Sbjct: 163 SEF 165
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 68 HNGDGR------ISKKELNDSLEN---LGIYIPDVELTQMIERIDVNGDGCVDIDEF 115
H GR +SKKEL + ++ +G + D E+ ++ E +D N D V+ E+
Sbjct: 17 HKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEY 73
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,810,766
Number of Sequences: 62578
Number of extensions: 168115
Number of successful extensions: 1554
Number of sequences better than 100.0: 315
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 484
Number of HSP's gapped (non-prelim): 710
length of query: 203
length of database: 14,973,337
effective HSP length: 94
effective length of query: 109
effective length of database: 9,091,005
effective search space: 990919545
effective search space used: 990919545
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)