BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028813
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/203 (91%), Positives = 198/203 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY+ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTD+ESFNNVKQWL+EIDRYASDNVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT N+ + YETAKAFADEIGIPFMETSAKD+TNVEQAFMAM+ASIK+RMASQP+ N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180
Query: 181 NARPPTVQIKGQPVAQKSGCCST 203
NARPPTVQI+GQPVAQK+GCCST
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/203 (91%), Positives = 196/203 (96%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLTANKVV+ ETAKAFADE+GIPFMETSAK++TNV+QAFMAMAASIKDRMASQP+
Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAA 180
Query: 181 NARPPTVQIKGQPVAQKSGCCST 203
NARP TVQI+GQPV QK+ CCS+
Sbjct: 181 NARPATVQIRGQPVNQKTSCCSS 203
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/202 (87%), Positives = 190/202 (94%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY+ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDL N+VVSYE KA ADEIGIPF+ETSAKD+TNVE+AFM MA IK+RMASQP+ N
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180
Query: 181 NARPPTVQIKGQPVAQKSGCCS 202
++P TVQ++GQPVAQ+S CCS
Sbjct: 181 ASKPATVQMRGQPVAQQSSCCS 202
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/203 (86%), Positives = 193/203 (95%), Gaps = 1/203 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+ YDVTD ESFNNVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAK++TNVE+AFMAM A+IK RMASQP+
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPA-G 179
Query: 181 NARPPTVQIKGQPVAQKSGCCST 203
++PPTVQI+GQPV Q+SGCCS+
Sbjct: 180 GSKPPTVQIRGQPVNQQSGCCSS 202
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/203 (86%), Positives = 192/203 (94%), Gaps = 1/203 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+ YDVTD ESFNNVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT+ KVVS ETAKAFADE+GIPF+ETSAK++TNVE+AFMAM A+IK RMASQP+
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPA-G 179
Query: 181 NARPPTVQIKGQPVAQKSGCCST 203
A+PPTVQI+GQPV Q+SGCCS+
Sbjct: 180 GAKPPTVQIRGQPVNQQSGCCSS 202
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 346 bits (888), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 167/202 (82%), Positives = 179/202 (88%), Gaps = 1/202 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVE DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT+ KVV Y AKAFADEIGIPF+ETSAK++TNVEQAFM MAA IK+RMASQP
Sbjct: 121 NKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPT 180
Query: 181 NARPPTVQIK-GQPVAQKSGCC 201
A P V+ + G+P+ KS C
Sbjct: 181 KAGGPVVRPQEGKPINSKSSSC 202
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 339 bits (870), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 172/201 (85%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK++TNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 339 bits (870), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 172/201 (85%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK++TNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 339 bits (870), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 172/201 (85%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK++TNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 339 bits (870), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/201 (79%), Positives = 172/201 (85%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK++TNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 337 bits (863), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 159/201 (79%), Positives = 171/201 (85%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQ SFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK++TNVEQ+FM MAA IK RM +
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
A V+I+ PV Q G C
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGC 204
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 336 bits (862), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 160/202 (79%), Positives = 172/202 (85%), Gaps = 1/202 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDLT KVV Y TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSG 180
Query: 181 NARPPTVQIKGQPV-AQKSGCC 201
+ V I+ PV + GCC
Sbjct: 181 GSEKSNVNIQSTPVKSSGGGCC 202
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 334 bits (857), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/202 (81%), Positives = 177/202 (87%), Gaps = 1/202 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVE DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV Y+ AKAFADEIGIPF+ETSAK++TNVEQAFM MAA IK+RMASQP
Sbjct: 121 NKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPP 180
Query: 181 NARPPTVQ-IKGQPVAQKSGCC 201
P V+ +G+P+ KS C
Sbjct: 181 KPGGPVVRPTEGKPINNKSSSC 202
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 331 bits (848), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 157/202 (77%), Positives = 175/202 (86%), Gaps = 1/202 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNP+YDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVG
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV + TAK +AD++GIPF+ETSAK++TNVEQAFM MAA IK+RM + +
Sbjct: 124 NKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAAS 183
Query: 181 NARPPTVQIKGQPV-AQKSGCC 201
+++P PV A K GCC
Sbjct: 184 DSKPSVKINSSTPVSANKGGCC 205
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 325 bits (833), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV Q G C
Sbjct: 181 GER-PNLKIDSTPVKQAGGGC 200
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 323 bits (829), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/201 (77%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRT+TSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +G+PF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV SG C
Sbjct: 181 GER-PNLKIDSTPVKSASGGC 200
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 323 bits (829), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 156/201 (77%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +G+PF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV SG C
Sbjct: 181 GER-PNLKIDSTPVKPASGGC 200
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 322 bits (825), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 156/201 (77%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 322 bits (825), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 156/201 (77%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 322 bits (824), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/201 (77%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQER RTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV Q G C
Sbjct: 181 GER-PNLKIDSTPVKQAGGGC 200
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 322 bits (824), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/202 (75%), Positives = 176/202 (87%), Gaps = 1/202 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+YI+SYISTIGVDFKIRT+EQDGKTIKLQ
Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIIVYD T+ ESFNNVKQWL+EIDRYA+++V KLL+G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK D+ +KVVS ET +A ADE+GIPF+ETSAKDS NVEQAF+ +A IK +M SQ + N
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180
Query: 181 -NARPPTVQIKGQPVAQKSGCC 201
+ P TVQ+KGQP+ Q +G C
Sbjct: 181 KTSGPGTVQMKGQPIQQNNGGC 202
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 320 bits (821), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/201 (77%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ES+ NVKQWL EIDRYAS+NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK RM +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 317 bits (811), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 150/203 (73%), Positives = 168/203 (82%), Gaps = 2/203 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGI +VYDVTD +SFNNVKQWL EIDRYA++ VNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK D+T KVV Y AK FAD +GIPF+ETSAK+++NVEQAF+ MA IK+RM S + N
Sbjct: 121 NKSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATN 180
Query: 181 NARPPTVQIKGQPVAQKS--GCC 201
N + G V+ S GCC
Sbjct: 181 NTKASVNVSPGHGVSNNSSGGCC 203
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 316 bits (810), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 153/201 (76%), Positives = 168/201 (83%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL+EIDRYA +NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLTA +VVS + AK FA+ +GI F+ETSAK++ NVE+AFM MAA IK RMA+ P
Sbjct: 121 NKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAP 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
A + P S CC
Sbjct: 181 KAGVKLTPGQQVPSNGGSKCC 201
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/202 (74%), Positives = 170/202 (84%), Gaps = 1/202 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNP+Y YLFKLLLIGDSGVGKSCLLLRFADD+Y ES+ISTIGVDFKIRT+E +GKTIKLQ
Sbjct: 1 MNPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ +F NV+QWL EIDR+A +NVNKLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRM-ASQPSM 179
NK DL A KVV + TAKAFAD + IPF+ETSAK STNVEQAFM MA IK+R+ ASQP+
Sbjct: 121 NKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQ 180
Query: 180 NNARPPTVQIKGQPVAQKSGCC 201
+ V P++ KSGCC
Sbjct: 181 TVDKNKVVPGSSAPISPKSGCC 202
>sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2
Length = 208
Score = 312 bits (800), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 175/208 (84%), Gaps = 5/208 (2%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M+ E+DYLFKLLLIGDS VGKSC LLRFADDSY++SYISTIGVDFKIRTVE +GKT+KLQ
Sbjct: 1 MSNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIIVYD+TD ESFNNVKQWL+EIDRYA+D+V KLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASI-KDRMASQPSM 179
NKCDL N+ V A+A+A E+GIPF+ETSAK+S NVE+AF+AM+A+I K + SQ ++
Sbjct: 121 NKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAAL 180
Query: 180 NNARPPTVQIKGQPVAQK----SGCCST 203
VQ+KG+P+ Q+ S CCST
Sbjct: 181 ERKPSNVVQMKGRPIQQEQQKSSRCCST 208
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 310 bits (795), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 169/203 (83%), Gaps = 2/203 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT E +GKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQ+SFNNVKQWL EIDRYA + VN+LLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK D+ KVV Y AK FAD + IPF+ETSAKDSTNVEQAF+ M+ IK+RM + +
Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180
Query: 181 NARPPTVQI-KGQPVAQKSG-CC 201
+ +V++ +G V+Q S CC
Sbjct: 181 SNAKSSVKVGQGTNVSQSSSNCC 203
>sp|Q92928|RAB1C_HUMAN Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5
SV=2
Length = 201
Score = 303 bits (775), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/201 (73%), Positives = 163/201 (81%), Gaps = 1/201 (0%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNP YD LFKLLLIGDSGVGKSCLLLRFADD Y ESYISTIGVDFKI+T+E DGKTIKLQ
Sbjct: 1 MNPGYDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERF TITSSYYRGAHG ++VYDVTDQES+ NVKQWL EIDR+AS+NVNKLLVG
Sbjct: 61 IWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DLT KVV TAK FAD +GIPF+ETSAK++TNVEQAFM MAA IK +M +
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASG 180
Query: 181 NARPPTVQIKGQPVAQKSGCC 201
R P ++I PV G C
Sbjct: 181 GER-PNLKIDSTPVKPAGGGC 200
>sp|P34140|RAB1B_DICDI Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B
PE=2 SV=2
Length = 206
Score = 294 bits (753), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/203 (70%), Positives = 161/203 (79%), Gaps = 3/203 (1%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+ DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGAHGII+VYDVTD SFNNVKQW+ EI RYA D+V +LLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMAS-QPSM 179
NKCDL K+V TA+ +AD +GIPF+ETSAK S NVEQAFM MA+ IK QP+
Sbjct: 121 NKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNN 180
Query: 180 NNA-RPPTVQIKG-QPVAQKSGC 200
N+ V+ G P+ +K C
Sbjct: 181 NSTYNAHVVKPTGFTPIGKKKKC 203
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 291 bits (744), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 161/207 (77%), Gaps = 7/207 (3%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIG+SGVGKSCLLLRF+DD+Y YISTIGVDFKI+TVE DGKT+KLQ
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRG+HGIIIVYDVTDQESFN VK WL EIDRYA+ V KLLVG
Sbjct: 61 IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCDL +VV Y+ AK FAD +PF+ETSA DSTNVE AF+ MA IK+ M SQ ++N
Sbjct: 121 NKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESM-SQQNLN 179
Query: 181 NARPP-----TVQIKGQPVAQK-SGCC 201
V +KGQ + GCC
Sbjct: 180 ETTQKKEDKGNVNLKGQSLTNTGGGCC 206
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 276 bits (706), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/199 (66%), Positives = 159/199 (79%), Gaps = 2/199 (1%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M PE+D+ FK+LLIGDSGVGKSCLLLRFADDS+ +++ISTIGVDFKI+T+ DGKTIKLQ
Sbjct: 3 MAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQ 62
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTITSSYYRGA GII+VYD TDQ+SF NVKQW+ EIDRYA +NVNKLLVG
Sbjct: 63 IWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVG 122
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NK DL KVV AK+FA+ GIPF+ETSAK++TNVE+ F++MA IK+R+A
Sbjct: 123 NKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD--IQE 180
Query: 181 NARPPTVQIKGQPVAQKSG 199
+P V IK + + G
Sbjct: 181 TPKPDEVDIKSKNKTKSGG 199
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 155/200 (77%), Gaps = 6/200 (3%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E +GK IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCD 124
AGQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+ I+++A+D+VNK+L+GNKCD
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCD 131
Query: 125 LTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARP 184
+ KVV K+ ADE GI F+ETSAK+S NVE+AF+++A IK RM P N +P
Sbjct: 132 MAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP---NEQP 188
Query: 185 PTVQIK---GQPVAQKSGCC 201
VQ G +K CC
Sbjct: 189 QVVQPGTNLGANNNKKKACC 208
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 119/197 (60%), Positives = 153/197 (77%), Gaps = 5/197 (2%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YD+L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E +GK IKLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCD 124
AGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+ I+++ASD+VNK+L+GNKCD
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCD 131
Query: 125 LTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARP 184
+T KVV K+ ADE GI F+ETSAK+S NVE+AF+ +A IK RM P+
Sbjct: 132 MTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTPN-----D 186
Query: 185 PTVQIKGQPVAQKSGCC 201
P I P +K+ CC
Sbjct: 187 PDHTICITPNNKKNTCC 203
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 253 bits (646), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 155/206 (75%), Gaps = 7/206 (3%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 182
D+ +K V +A ADE GI F ETSAK + NVE+ F ++A IK R+A + A
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEA 190
Query: 183 RPPTVQIK-----GQPVAQKSGCCST 203
+ P++ IK G A KS CC +
Sbjct: 191 Q-PSITIKPADQSGNQAAAKSACCGS 215
>sp|O76173|RAB1C_DICDI Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C
PE=2 SV=1
Length = 201
Score = 252 bits (644), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 146/169 (86%)
Query: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
+PEYD L K+L+IGDSGVGKSC+LLRFAD+ + +SYISTIGVDF IRT+E DGK IKLQI
Sbjct: 27 HPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQI 86
Query: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGN 121
WDTAGQERF+TIT+SYYRGAHG+IIVYD+T +SFN++K+WL ++DR+AS +V KL+VGN
Sbjct: 87 WDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGN 146
Query: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIK 170
KCDL + + V ++ AK FADE+ IP METSAK+ST +++AF+ +A+ IK
Sbjct: 147 KCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 251 bits (640), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 154/209 (73%), Gaps = 12/209 (5%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 182
D+ +K V +A ADE GI F ETSAK + NVE+ F ++ IK R++ S A
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDS--RA 188
Query: 183 RPPTVQIK--------GQPVAQKSGCCST 203
P T++I GQ QKS CC T
Sbjct: 189 EPATIKISQTDQAAGAGQAT-QKSACCGT 216
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 153/208 (73%), Gaps = 10/208 (4%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASD+VNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 182
D+ +K V +A ADE G+ F ETSAK + NVE+ F ++A IK R+A + A
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDA--RA 188
Query: 183 RPPTVQIK-------GQPVAQKSGCCST 203
P T++I QKS CC T
Sbjct: 189 EPQTIKINQSDQGAGTSQATQKSACCGT 216
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 246 bits (627), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 151/209 (72%), Gaps = 10/209 (4%)
Query: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIW 62
P+YD L KLLL+GDSGVGKSCLLLRF DD + S+I+TIG+DFKI+ V+ DGK +KLQIW
Sbjct: 8 PDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIW 67
Query: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNK 122
DTAGQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+ I+++ASDNVNK+LVGNK
Sbjct: 68 DTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNK 127
Query: 123 CDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPS--- 178
DL +K VVS +A ADE G F ETSAKD+ +VE+AF+A+A + RM + +
Sbjct: 128 LDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQ 187
Query: 179 -----MNNARPPTVQIKGQPV-AQKSGCC 201
+A P G P AQ CC
Sbjct: 188 LLQQQQLSAAQPVRLTSGSPSPAQGKSCC 216
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+DD++ S+I+TIG+DFKIRTVE DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 182
D+ +K V +A ADE GI F ETSAK + NVE FM++A IK R+ + A
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDT--KA 188
Query: 183 RPPTVQIKGQ------PVAQKSGCCS 202
P ++I Q A+KS CCS
Sbjct: 189 EPQGIKITKQDTAASSSTAEKSACCS 214
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 150/197 (76%), Gaps = 2/197 (1%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E DGK IKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCD 124
AGQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++AS+NV K+L+GNKCD
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 125 LTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNARP 184
+ VS+E +A ADE+G+ F+E SAK + NV++AF +A IK + + + +
Sbjct: 126 CEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQA 185
Query: 185 PTVQIKGQPVAQKSGCC 201
V + ++ CC
Sbjct: 186 NNVDLGNDRTVKR--CC 200
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 154/208 (74%), Gaps = 11/208 (5%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+DD++ S+I+TIG+DFKIRTVE DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKC 123
TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASD+VNK+LVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKA 130
Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 182
D+ +K V +A ADE GI F ETSAK + NVEQ F+++A IK R+ S A
Sbjct: 131 DMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLT--ESDTKA 188
Query: 183 RPPTVQIKGQ--------PVAQKSGCCS 202
P ++I Q +KS CCS
Sbjct: 189 EPQGIKITKQDANKASSSSTNEKSACCS 216
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 149/187 (79%), Gaps = 3/187 (1%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D TIKLQIWD
Sbjct: 3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWD 62
Query: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNK 122
TAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK
Sbjct: 63 TAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNK 122
Query: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMNNA 182
DL ++VVS + AK A++ + ++E SAK +NVE+AF +A ++KD++ PS NA
Sbjct: 123 IDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS--NA 180
Query: 183 RPPTVQI 189
TV +
Sbjct: 181 PASTVSL 187
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 143/190 (75%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTV+ +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+G
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ A + V E A A E GI F ETSAK S NV++AF ++A I + + S N
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
Query: 181 NARPPTVQIK 190
+PP+ +K
Sbjct: 181 GNKPPSTDLK 190
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 143/190 (75%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DF+IRTV+ +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+G
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ A + V E A A E GI F ETSAK S NV++AF ++A I + + N
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKN 180
Query: 181 NARPPTVQIK 190
N +PP+ +K
Sbjct: 181 NNKPPSTDLK 190
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 233 bits (594), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/200 (54%), Positives = 146/200 (73%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTVE +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+G
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ A + V E A A E GI F ETSAK S NV++AF ++A I + + S N
Sbjct: 121 NKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGN 180
Query: 181 NARPPTVQIKGQPVAQKSGC 200
+++P + +K + C
Sbjct: 181 HSKPSSTDLKPSDKKNTNKC 200
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 233 bits (593), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 144/190 (75%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTVE +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+G
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ A + V E A+ A E I F ETSAK S NV++AF ++A I + + S N
Sbjct: 121 NKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGN 180
Query: 181 NARPPTVQIK 190
+++P + +K
Sbjct: 181 SSKPSSTDLK 190
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 147/197 (74%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ + VS E + A + GI FMETSAK + NVE AF +A IK +M + N
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 181 NARPPTVQIKGQPVAQK 197
+ + +K P QK
Sbjct: 181 SPQGSNQGVKITPDQQK 197
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 147/197 (74%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ + VS E + A + GI FMETSAK + NVE AF +A IK +M + N
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 181 NARPPTVQIKGQPVAQK 197
+ + +K P QK
Sbjct: 181 SPQGSNQGVKITPDQQK 197
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 147/197 (74%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ + VS E + A + GI FMETSAK + NVE AF +A IK +M + N
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 181 NARPPTVQIKGQPVAQK 197
+ + +K P QK
Sbjct: 181 SPQGSNQGVKITPDQQK 197
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 147/194 (75%), Gaps = 5/194 (2%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAASIKDRMASQPSMN 180
NKCD+ + VS E + A + GI F+ETSAK STNVE+AF +A I ++ + + +
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDS 180
Query: 181 NARPPTVQIKGQPV 194
N+ G PV
Sbjct: 181 NSSGA-----GGPV 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,221,944
Number of Sequences: 539616
Number of extensions: 2580306
Number of successful extensions: 13789
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 11726
Number of HSP's gapped (non-prelim): 1302
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)