BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028815
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2Z4|MSBP2_ARATH Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2
PE=1 SV=1
Length = 233
Score = 213 bits (543), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 125/178 (70%), Gaps = 18/178 (10%)
Query: 4 LYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPE--PPEDLKNKLISSSAAA 61
++ + +TIT YTGLSPAAFFT+LAL VY+ V FV PE P L+ + S
Sbjct: 5 IWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP--- 61
Query: 62 SAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGP 121
+P VQLG++TE EL+ YDGSD KPLLMAIKGQIYDVS+SRMFYGP
Sbjct: 62 -------------LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGP 108
Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
GGPYA+FAG+DASRALA MSF+ QDLTG+I GL ELE LQDWEYKFM KYVKVG I
Sbjct: 109 GGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166
>sp|Q9XFM6|MSBP1_ARATH Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1
PE=1 SV=2
Length = 220
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 126/194 (64%), Gaps = 17/194 (8%)
Query: 4 LYAAVMDTITTYTGLSPAAFFTILALMCVVYKTVCSMFVDPEPPEDLKNKLISSSAAASA 63
L+ + + I YTGLSP FFT LAL +Y+ + F P +D+ + S A
Sbjct: 5 LWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPF--DDVNRHQRARSLAQE- 61
Query: 64 ATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGG 123
+ IP+ VQ+G++TE EL+ YDGSDP KPLLMAIK QIYDV++SRMFYGPGG
Sbjct: 62 -------EEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGG 114
Query: 124 PYAMFAGRDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIV--- 180
PYA+FAG+DASRALA MSF+ +DLT ++ GL EL+ LQDWEYKFM KY KVG +
Sbjct: 115 PYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAG 174
Query: 181 ----SEQTSKPTKN 190
+ S+PT+N
Sbjct: 175 SEPETASVSEPTEN 188
>sp|Q9SK39|SBP3_ARATH Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3
PE=1 SV=1
Length = 100
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 73/99 (73%)
Query: 83 DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
+ T +L Y+G+D +KP+ +AIKG+++DV+ + FYG GG Y+MFAG+DASRAL MS
Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61
Query: 143 DPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS 181
+ +D++ ++EGL++ E+ L DWE KF KY VG++VS
Sbjct: 62 NEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100
>sp|P70580|PGRC1_RAT Membrane-associated progesterone receptor component 1 OS=Rattus
norvegicus GN=Pgrmc1 PE=1 SV=3
Length = 195
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 63 AATAANFSNQTMIPETVQLGDVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGP 121
A+ N ++ ++ D T ELR YDG DP +LMAI G+++DV++ R FYGP
Sbjct: 52 GASGDNDDDEPPPLPRLKPRDFTPAELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGP 109
Query: 122 GGPYAMFAGRDASRALALMSFDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQ 178
GPY +FAGRDASR LA D + L + LSD ++ E L DW+ +F KY VG+
Sbjct: 110 EGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGK 169
Query: 179 IVSEQTSKPTKNGDKVPENQ 198
++ E + D+ P+++
Sbjct: 170 LLKEGEEPTVYSDDEEPKDE 189
>sp|Q5RED0|PGRC1_PONAB Membrane-associated progesterone receptor component 1 OS=Pongo
abelii GN=PGRMC1 PE=2 SV=3
Length = 195
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Query: 83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
D T ELR +DG DP +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA
Sbjct: 72 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129
Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
D + L + LSD ++ E L DWE +F KY VG+++ E + ++ P+++
Sbjct: 130 LDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 189
Query: 199 N 199
+
Sbjct: 190 S 190
>sp|O00264|PGRC1_HUMAN Membrane-associated progesterone receptor component 1 OS=Homo
sapiens GN=PGRMC1 PE=1 SV=3
Length = 195
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Query: 83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
D T ELR +DG DP +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA
Sbjct: 72 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129
Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
D + L + LSD ++ E L DWE +F KY VG+++ E + ++ P+++
Sbjct: 130 LDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 189
Query: 199 N 199
+
Sbjct: 190 S 190
>sp|O55022|PGRC1_MOUSE Membrane-associated progesterone receptor component 1 OS=Mus
musculus GN=Pgrmc1 PE=1 SV=4
Length = 195
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
D T ELR +DG DP +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA
Sbjct: 72 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 129
Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
D + L + LSD ++ E L DW+ +F KY VG+++ E + D+ P+++
Sbjct: 130 LDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKEGEEPTVYSDDEEPKDE 189
>sp|Q95250|PGRC1_PIG Membrane-associated progesterone receptor component 1 OS=Sus scrofa
GN=PGRMC1 PE=1 SV=3
Length = 194
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 74/121 (61%), Gaps = 6/121 (4%)
Query: 83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
D T ELR +DG DP +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA
Sbjct: 71 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 128
Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDKVPENQ 198
D + L + LSD ++ E L DW+ +F KY VG+++ E + ++ P+++
Sbjct: 129 LDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGEEPTVYSDEEEPKDE 188
Query: 199 N 199
+
Sbjct: 189 S 189
>sp|Q5ZKN2|PGRC1_CHICK Membrane-associated progesterone receptor component 1 OS=Gallus
gallus GN=PGRMC1 PE=2 SV=3
Length = 192
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
D T +LR YDG DP +LMA+ G+++DV+R+ FYGP GPY +FAGRDASR LA
Sbjct: 70 DFTLEQLRPYDGVRDPR--ILMAVNGKVFDVTRASKFYGPDGPYGIFAGRDASRGLATFC 127
Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSE 182
D + L + + LSD ++ E L+DWE +F KY VG+++ +
Sbjct: 128 LDKEALRDDYDDLSDLNATQQETLRDWESQFTFKYHHVGKLLKD 171
>sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus
GN=PGRMC1 PE=2 SV=3
Length = 194
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 83 DVTEHELRAYDG-SDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMS 141
D T ELR +DG DP +LMAI G+++DV++ R FYGP GPY +FAGRDASR LA
Sbjct: 71 DFTPAELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFC 128
Query: 142 FDPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIVSEQTSKPTKNGDK 193
D + L + LSD ++ E L DW+ +F KY VG+++ + +PT DK
Sbjct: 129 LDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKD-GEEPTVYSDK 182
>sp|O15173|PGRC2_HUMAN Membrane-associated progesterone receptor component 2 OS=Homo
sapiens GN=PGRMC2 PE=1 SV=1
Length = 223
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 83 DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
D + +LR YDGS N +L+A+ G+++DV++ FYGP GPY +FAGRDASR LA
Sbjct: 102 DFSLEQLRQYDGS-RNPRILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCL 160
Query: 143 DPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIV--SEQTSKPTKNGDKVPEN 197
D L + LSD ++E +++WE +F EKY VG+++ E+ S+ T D N
Sbjct: 161 DKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPSEYTDEEDTKDHN 220
Query: 198 Q 198
+
Sbjct: 221 K 221
>sp|Q6IUR5|NENF_RAT Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1
Length = 171
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 8/121 (6%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDP 144
TE EL Y G + ++P+ +A+KG ++DV+ + FYG G PY AG+D+SR +A MS DP
Sbjct: 47 TEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDP 106
Query: 145 QDLTGNIEGLSDSELEVLQDWEYK-FMEKYVKVG----QIVSEQTSKPTKNGDKVPENQN 199
DLT +I GL+ ELE L D K + KY VG +I++E S N D PE+Q
Sbjct: 107 ADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNEDGS---PNLDFKPEDQP 163
Query: 200 H 200
H
Sbjct: 164 H 164
>sp|Q9CQ45|NENF_MOUSE Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1
Length = 171
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 8/121 (6%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDP 144
TE EL Y G + ++P+ +A+KG ++DV+ + FYG G PY AG+D+SR +A MS DP
Sbjct: 47 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDP 106
Query: 145 QDLTGNIEGLSDSELEVLQDWEYK-FMEKYVKVG----QIVSEQTSKPTKNGDKVPENQN 199
DLT + GL+ ELE L D K + KY VG +I++E S N D PE+Q
Sbjct: 107 ADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVGYTARRILNEDGS---PNLDFKPEDQP 163
Query: 200 H 200
H
Sbjct: 164 H 164
>sp|Q1JQA5|NENF_BOVIN Neudesin OS=Bos taurus GN=NENF PE=2 SV=1
Length = 169
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 8/121 (6%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDP 144
TE EL Y G + ++P+ MA+KG ++DV+ + FYG G PY G+D++R +A MS DP
Sbjct: 45 TEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 104
Query: 145 QDLTGNIEGLSDSELEVLQD-WEYKFMEKYVKVG----QIVSEQTSKPTKNGDKVPENQN 199
DLT + GL+ ELE L D + + KY VG +I++E S N D PE+Q
Sbjct: 105 ADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVGYTARRILNEDGS---PNLDFKPEDQP 161
Query: 200 H 200
H
Sbjct: 162 H 162
>sp|Q5XIU9|PGRC2_RAT Membrane-associated progesterone receptor component 2 OS=Rattus
norvegicus GN=Pgrmc2 PE=1 SV=1
Length = 217
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 83 DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
D + +LR YDG+ + +L+A+ G+++DV++ FYGP GPY +FAGRDASR LA
Sbjct: 96 DFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCL 154
Query: 143 DPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIV 180
D L + LSD ++E +++WE +F EKY VG+++
Sbjct: 155 DKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLL 195
>sp|Q80UU9|PGRC2_MOUSE Membrane-associated progesterone receptor component 2 OS=Mus
musculus GN=Pgrmc2 PE=1 SV=2
Length = 217
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 83 DVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSF 142
D + +LR YDG+ + +L+A+ G+++DV++ FYGP GPY +FAGRDASR LA
Sbjct: 96 DFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCL 154
Query: 143 DPQDLTGNIEGLSD---SELEVLQDWEYKFMEKYVKVGQIV 180
D L + LSD ++E +++WE +F EKY VG+++
Sbjct: 155 DKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLL 195
>sp|O13995|DAP1_SCHPO Cytochrome P450 regulator dap1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=dap1 PE=1 SV=1
Length = 166
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 76 PETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASR 135
P+ + D T EL+ Y+GS N + +AIKG +Y+V+ FYGP GPY+ FAG DASR
Sbjct: 35 PKQPEWRDYTPAELKEYNGS-KNSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASR 93
Query: 136 ALALMSFDPQ-------DLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSKPT 188
LA SFD + + + L+D E + L DW+ F +KY VG+++S + ++
Sbjct: 94 GLAKNSFDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLISPREARAA 153
Query: 189 KNGDKVPENQNHD 201
+ E H+
Sbjct: 154 ATISETEEKVAHN 166
>sp|Q12091|DAP1_YEAST Damage response protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DAP1 PE=1 SV=1
Length = 152
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 61 ASAATAANFSNQTMIPETVQLGDVTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYG 120
+ A+ N SN+ P V G+ L ++G D K + +AI+G++YD +R R FYG
Sbjct: 23 GNGASNTNDSNKGSEP--VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYG 79
Query: 121 PGGPYAMFAGRDASRALALMSFD---PQDLTGNIEGLSD---SELEVLQDWEYKFMEKYV 174
P GPY FAG DASR LAL SFD +D I+ L D +++ L +W+ F KY
Sbjct: 80 PSGPYTNFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYP 139
Query: 175 KVGQIVSE 182
+G ++ E
Sbjct: 140 CIGTLIPE 147
>sp|Q9UMX5|NENF_HUMAN Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1
Length = 172
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 8/121 (6%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDP 144
TE EL Y G + ++P+ +A+KG ++DV+ + FYG G PY G+D++R +A MS DP
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 145 QDLTGNIEGLSDSELEVLQDWEYK-FMEKYVKVG----QIVSEQTSKPTKNGDKVPENQN 199
DLT + GL+ ELE L + K + KY VG +I++E S N D PE+Q
Sbjct: 108 ADLTHDTTGLTAKELEALDEVFTKVYKAKYPIVGYTARRILNEDGS---PNLDFKPEDQP 164
Query: 200 H 200
H
Sbjct: 165 H 165
>sp|A2CES0|NEUFC_DANRE Neuferricin OS=Danio rerio GN=cyb5d2 PE=3 SV=1
Length = 267
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 84 VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFD 143
+T+ +L Y+G +K L +AI GQ++DV + R YGPGG Y F G+DASRA F
Sbjct: 54 LTKEQLSLYNGGKNSKGLYLAILGQVFDVEKGRKHYGPGGGYHFFTGKDASRAFITGDFT 113
Query: 144 PQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSE---QTSKPT 188
L+ ++ S+S++ L DW + Y VG+++ +T +PT
Sbjct: 114 EAGLSNDVSDFSESQIVALYDWLSFYQRDYTPVGKLIGRFYTETGQPT 161
>sp|Q60YT6|NEUFC_CAEBR Neuferricin homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1
Length = 326
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDP 144
T +L +DGS +KP +AI G++YDV + +YGPG Y FAGRDA+RA F
Sbjct: 102 TPEQLHFFDGSRDSKPCYLAILGRVYDVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFTE 161
Query: 145 QDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
L + GLS EL ++DW + ++Y VG +
Sbjct: 162 NGLVASTHGLSHDELLSIRDWVSFYDKEYPLVGVV 196
>sp|Q28FI8|NEUFC_XENTR Neuferricin OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1
Length = 273
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 74 MIPETVQLGD---VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAG 130
+ P+ +L + +++ EL YDG + + +AI GQ++DV + YGPGG Y+ FAG
Sbjct: 34 IFPQQCELSEGRLMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKHYGPGGSYSFFAG 93
Query: 131 RDASRALALMSFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS---EQTSKP 187
+DASRA F + L ++ LS ++ L +W + + Y+ +G++ +++ P
Sbjct: 94 KDASRAYMTGDFTEKGLVDDVTELSPLQMLHLHNWLSFYQQNYITIGKLTGRFYDESGNP 153
Query: 188 TK 189
TK
Sbjct: 154 TK 155
>sp|Q9XXA7|NEUFC_CAEEL Neuferricin homolog OS=Caenorhabditis elegans GN=tag-131 PE=3 SV=1
Length = 326
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%)
Query: 85 TEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDP 144
T +L +DG+ +KP+ +AI G++Y+V + +YGPG Y FAGRDA+RA F
Sbjct: 102 TPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQE 161
Query: 145 QDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQI 179
L GLS EL ++DW + ++Y VG +
Sbjct: 162 SGLIATTHGLSHDELLSIRDWVSFYDKEYPLVGVV 196
>sp|Q5SSH8|NEUFC_MOUSE Neuferricin OS=Mus musculus GN=Cyb5d2 PE=1 SV=1
Length = 263
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 88 ELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDL 147
EL Y G + L +A+ G++YDVS R Y PG Y+ FAGRDASRA + L
Sbjct: 42 ELARYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGAHYSGFAGRDASRAFVTGDYSEAGL 101
Query: 148 TGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSE 182
+I GLS SE+ L +W + + YV VG++V
Sbjct: 102 VDDINGLSSSEILTLHNWLSFYEKNYVFVGRLVGR 136
>sp|Q6AY62|NEUFC_RAT Neuferricin OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1
Length = 263
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%)
Query: 88 ELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDL 147
EL Y G + L +A+ G++YDVS R Y PG Y+ FAGRDASRA + L
Sbjct: 42 ELARYRGGPGDPGLYLALLGRVYDVSSGRKHYEPGAHYSGFAGRDASRAFVTGDYSEAGL 101
Query: 148 TGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSEQTSK 186
++ GLS SE+ L +W + + YV VG+++ K
Sbjct: 102 VDDVNGLSSSEILTLHNWLSFYEKNYVFVGRLIGRFYGK 140
>sp|Q8WUJ1|NEUFC_HUMAN Neuferricin OS=Homo sapiens GN=CYB5D2 PE=2 SV=1
Length = 264
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%)
Query: 88 ELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDL 147
EL Y G + L +A+ G++YDVS R Y PG Y+ FAGRDASRA L
Sbjct: 42 ELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGL 101
Query: 148 TGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSE 182
++ LS +E+ L +W + + YV VG++
Sbjct: 102 VDDVSDLSAAEMLTLHNWLSFYEKNYVCVGRVTGR 136
>sp|Q9W376|NEUFC_DROME Neuferricin homolog OS=Drosophila melanogaster GN=CG12056 PE=2 SV=1
Length = 287
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 75 IPETVQLGD-----VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFA 129
IP Q GD T EL ++G + +PL +A+ G ++DVSR YG G Y F
Sbjct: 50 IPLAFQAGDDIGTLFTPAELAKFNGEEEGRPLYLALLGSVFDVSRGIKHYGSGCSYNFFV 109
Query: 130 GRDASRALALMSFDPQD--LTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVSE 182
GRDAS + F+ D ++ L +L L W + + YV G+++
Sbjct: 110 GRDASVSFISGDFETYDPETADDVLTLKPDDLIGLAGWRDFYQKDYVYKGRVIGR 164
>sp|Q29HF1|NEUFC_DROPS Neuferricin homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA11364 PE=3 SV=1
Length = 286
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 84 VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRAL---ALM 140
+T EL Y+G D +P+ +A+ G ++DV+R YG G Y F GRDAS A
Sbjct: 64 LTSAELSKYNGED-GQPIYLALLGSVFDVTRGIKHYGTGCSYNFFVGRDASVAFISGEFE 122
Query: 141 SFDPQDLTGNIEGLSDSELEVLQDWEYKFMEKYVKVGQIVS---EQTSKPT 188
+DPQ ++ L ++L L +W + ++Y+ G+++ ++ +PT
Sbjct: 123 EYDPQ-TADDVLTLKPNDLLGLANWRDFYEKEYIYKGKLIGRFYDEQGEPT 172
>sp|Q8PWV5|SYW_METMA Tryptophan--tRNA ligase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=trpS PE=3 SV=2
Length = 491
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 24/145 (16%)
Query: 48 EDLKNKLISSSAAASAATAANFSNQT----MIPETVQLGDVTEHELRAYDGS-------- 95
+DL +L + + + FS +T M+ Q D+ + +L + GS
Sbjct: 152 KDLAFELGAKVNFSELSAIYGFSGETSLSHMLSVATQAADILQPQLEEFGGSKPVVVPVG 211
Query: 96 ---DPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMFAGRDASRALALMSFDPQDLTGNIE 152
DP+ L + G++ GG Y G+ A R AL Q+L I
Sbjct: 212 PDQDPHLRLTRGLAGKMNMFRVEERETAEGGKYLSVRGKGAPRE-AL-----QELKKRIP 265
Query: 153 G---LSDSELEVLQDWEYKFMEKYV 174
G L + ++VLQ +Y F+E++V
Sbjct: 266 GKVKLYEEHIDVLQTPDYAFLERFV 290
>sp|O34784|YOBI_BACSU Uncharacterized membrane protein YobI OS=Bacillus subtilis (strain
168) GN=yobI PE=4 SV=1
Length = 1201
Score = 30.4 bits (67), Expect = 7.3, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 84 VTEHELRAYDGSDPNKPLLMAIKGQIYDVSRSRMFYGPGGPYAMF 128
+ + +L A D DPNK L M I IY V S++ Y G Y +F
Sbjct: 376 IYQQKLSAID-LDPNKMLAMIIYKNIYPVDFSKLQYNKGLVYEIF 419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,340,037
Number of Sequences: 539616
Number of extensions: 2986948
Number of successful extensions: 8686
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8642
Number of HSP's gapped (non-prelim): 41
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)