BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028817
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65355|GGH_ARATH Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2
Length = 347
Score = 170 bits (431), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/137 (64%), Positives = 106/137 (77%), Gaps = 5/137 (3%)
Query: 33 WNYIWISIF-LYLFKRLSKSNPQSTILLPSQQRNNDSVPRSPAAT--DRRLNNRPVIGIL 89
W+Y+W+ + L LFK +TILLPSQ + RSP + D LN RPVIGIL
Sbjct: 2 WSYVWLPLVALSLFKDSIIMAKAATILLPSQ--TGFDISRSPVCSAPDPNLNYRPVIGIL 59
Query: 90 SHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEPEEILFEKLKLVNGVLLT 149
SHPGDGASGRL+N+ +AS IAASYVK ES GARVIPLI+NEPEEILF+KL+LVNGV+LT
Sbjct: 60 SHPGDGASGRLSNATDASSIAASYVKLAESGGARVIPLIFNEPEEILFQKLELVNGVILT 119
Query: 150 GGWAKKGLYFQIVEKIF 166
GGWAK+GLYF+IV+KIF
Sbjct: 120 GGWAKEGLYFEIVKKIF 136
>sp|P93164|GGH_SOYBN Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1
Length = 342
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 94/133 (70%), Gaps = 5/133 (3%)
Query: 35 YIWISIFLYLFKRLSKSNPQSTILLPSQQRNNDSVPRSPAATDRRLNNRPVIGILSHPGD 94
+ ++++F L LS ++ I LPSQ ++DSV S ATD LN +PVIGIL+HPGD
Sbjct: 10 FFFVTLFTCL---LSATSHDDHIFLPSQLHDDDSV--SCTATDPSLNYKPVIGILTHPGD 64
Query: 95 GASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEPEEILFEKLKLVNGVLLTGGWAK 154
GASGRL+N+ SYIAASYVKFVES GARVIPLIYNE E L +KL LVNGVL TGGWA
Sbjct: 65 GASGRLSNATGVSYIAASYVKFVESGGARVIPLIYNESPENLNKKLDLVNGVLFTGGWAV 124
Query: 155 KGLYFQIVEKIFK 167
G Y + IFK
Sbjct: 125 SGPYLDTLGNIFK 137
>sp|Q54LN4|GGHA_DICDI Gamma-glutamyl hydrolase A OS=Dictyostelium discoideum GN=gghA PE=3
SV=1
Length = 317
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
Query: 79 RLNNRPVIGILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEPEEILFE 138
++NNRP+IGIL+ P DG + YIAASYVK++ESAGARV+P++Y+ + L E
Sbjct: 25 KINNRPIIGILTQPTDGDMTTFG----SQYIAASYVKYIESAGARVVPILYDIDIKSLTE 80
Query: 139 KLKLVNGVLLTGGWAKKGLYFQIVEKIFKHEAIYERKKQSL 179
+ +NGV GG F ++ +Y QS+
Sbjct: 81 LMGSINGVFFPGGGVD-----------FNNQTVYTDTIQSI 110
>sp|Q54HL4|GGHB_DICDI Gamma-glutamyl hydrolase B OS=Dictyostelium discoideum GN=gghB PE=3
SV=1
Length = 347
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 78 RRLNNRPVIGILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEPEEILF 137
+NN PVIGIL+ P + +N +Y+ ASYVK+VESAGARV+P+ YN+ +E L
Sbjct: 21 NTINNTPVIGILTQPFPSS---INIKYGDNYLMASYVKYVESAGARVVPIFYNQDDESLT 77
Query: 138 EKLKLVNGVLLTGG 151
K +NG+LL GG
Sbjct: 78 TIFKQINGILLPGG 91
>sp|Q9Z0L8|GGH_MOUSE Gamma-glutamyl hydrolase OS=Mus musculus GN=Ggh PE=1 SV=2
Length = 317
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 83 RPVIGILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEPEEILFEKLKL 142
RP+IG++ G +L N YIAASYVK++ESAGARV+P+ + + E +
Sbjct: 33 RPIIGVVMQECFGKMAKLGNY----YIAASYVKYIESAGARVVPIRPDLSDAEYEELFRS 88
Query: 143 VNGVLLTGGWA 153
+NGVLL GG A
Sbjct: 89 INGVLLPGGGA 99
>sp|Q62867|GGH_RAT Gamma-glutamyl hydrolase OS=Rattus norvegicus GN=Ggh PE=1 SV=1
Length = 317
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 78 RRLNNRPVIGILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPL---IYNEPEE 134
R + RP+IGI+ G +L YIAASYVKF+ESAGARV+P+ + + E
Sbjct: 28 ERGSKRPIIGIIMQECYGNMTKLGRF----YIAASYVKFIESAGARVVPIRLDLNDAQYE 83
Query: 135 ILFEKLKLVNGVLLTGGWA 153
LF +NGVLL GG A
Sbjct: 84 TLFRS---INGVLLPGGGA 99
>sp|Q92820|GGH_HUMAN Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE=1 SV=2
Length = 318
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 83 RPVIGILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEPE---EILFEK 139
+P+IGIL ++ + YIAASYVK++ESAGARV+P+ + E EILF
Sbjct: 33 KPIIGILMQK---CRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILF-- 87
Query: 140 LKLVNGVLLTGG 151
K +NG+L GG
Sbjct: 88 -KSINGILFPGG 98
>sp|A7YWG4|GGH_BOVIN Gamma-glutamyl hydrolase OS=Bos taurus GN=GGH PE=2 SV=1
Length = 318
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Query: 85 VIGILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPL---IYNEPEEILFEKLK 141
+IGIL + R + YIAASYVKF+ESAGARV+P+ + NE E LF K
Sbjct: 35 IIGILMQKCHNKNMR---ALGKYYIAASYVKFLESAGARVVPVRLDLKNEEYEKLF---K 88
Query: 142 LVNGVLLTGG 151
+NGVL GG
Sbjct: 89 SINGVLFPGG 98
>sp|A5I7Y9|PURA_CLOBH Adenylosuccinate synthetase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=purA PE=3 SV=1
Length = 428
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 88 ILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEP-EEILFEKLKLVNGV 146
IL + A G + I SY +E +G RV LI+ E EE L E L++ N +
Sbjct: 113 ILDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKI 172
Query: 147 L--LTGGWAKK-----GLYFQIVEKI--FKHE--AIYERK----KQSLVHGITGDVVQKD 191
+ + GG A Y EK+ F + I +K K+ L G G ++ D
Sbjct: 173 ITEIFGGRALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDID 232
Query: 192 YYTWPYHFSGS 202
Y T+PY S S
Sbjct: 233 YGTYPYVTSSS 243
>sp|A7FZF9|PURA_CLOB1 Adenylosuccinate synthetase OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=purA PE=3 SV=1
Length = 428
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 88 ILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEP-EEILFEKLKLVNGV 146
IL + A G + I SY +E +G RV LI+ E EE L E L++ N +
Sbjct: 113 ILDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKI 172
Query: 147 L--LTGGWAKK-----GLYFQIVEKI--FKHE--AIYERK----KQSLVHGITGDVVQKD 191
+ + GG A Y EK+ F + I +K K+ L G G ++ D
Sbjct: 173 ITEIFGGRALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDID 232
Query: 192 YYTWPYHFSGS 202
Y T+PY S S
Sbjct: 233 YGTYPYVTSSS 243
>sp|C1FNL8|PURA_CLOBJ Adenylosuccinate synthetase OS=Clostridium botulinum (strain Kyoto
/ Type A2) GN=purA PE=3 SV=1
Length = 428
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 88 ILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEP-EEILFEKLKLVNGV 146
IL + A G + I SY +E +G RV LI+ E EE L E L++ N +
Sbjct: 113 ILDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKI 172
Query: 147 L--LTGGWAKK-----GLYFQIVEKI--FKHE--AIYERK----KQSLVHGITGDVVQKD 191
+ + GG A Y EK+ F + I +K K+ L G G ++ D
Sbjct: 173 ITEIFGGEALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDID 232
Query: 192 YYTWPYHFSGS 202
Y T+PY S S
Sbjct: 233 YGTYPYVTSSS 243
>sp|B1KU85|PURA_CLOBM Adenylosuccinate synthetase OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=purA PE=3 SV=1
Length = 428
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 88 ILSHPGDGASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEP-EEILFEKLKLVNGV 146
IL + A G + I SY +E +G RV LI+ E EE L E L++ N +
Sbjct: 113 ILDGIKERARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKI 172
Query: 147 L--LTGGWAKK-----GLYFQIVEKI--FKHE--AIYERK----KQSLVHGITGDVVQKD 191
+ + GG A Y EK+ F + I +K K+ L G G ++ D
Sbjct: 173 ITEVFGGEALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDID 232
Query: 192 YYTWPYHFSGS 202
Y T+PY S S
Sbjct: 233 YGTYPYVTSSS 243
>sp|A7GJL2|PURA_CLOBL Adenylosuccinate synthetase OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=purA PE=3 SV=1
Length = 428
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 96 ASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEP-EEILFEKLKLVNGVL--LTGGW 152
A G + I SY +E +G RV LI+ E EE L E L++ N ++ + GG
Sbjct: 121 ARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKIITEVFGGE 180
Query: 153 AKK-----GLYFQIVEKI--FKHE--AIYERK----KQSLVHGITGDVVQKDYYTWPYHF 199
A Y EK+ F + I +K K+ L G G ++ DY T+PY
Sbjct: 181 ALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVT 240
Query: 200 SGS 202
S S
Sbjct: 241 SSS 243
>sp|B1IHP2|PURA_CLOBK Adenylosuccinate synthetase OS=Clostridium botulinum (strain Okra /
Type B1) GN=purA PE=3 SV=1
Length = 428
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 96 ASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEP-EEILFEKLKLVNGVL--LTGGW 152
A G + I SY +E +G RV LI+ E EE L E L++ N ++ + GG
Sbjct: 121 ARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKIITEVFGGE 180
Query: 153 AKK-----GLYFQIVEKI--FKHE--AIYERK----KQSLVHGITGDVVQKDYYTWPYHF 199
A Y EK+ F + I +K K+ L G G ++ DY T+PY
Sbjct: 181 ALDYNEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYVT 240
Query: 200 SGS 202
S S
Sbjct: 241 SSS 243
>sp|C3KWG8|PURA_CLOB6 Adenylosuccinate synthetase OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=purA PE=3 SV=1
Length = 428
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 18/124 (14%)
Query: 96 ASGRLNNSKNASYIAASYVKFVESAGARVIPLIYNEP-EEILFEKLKLVNGVLLTGGWAK 154
A G + I SY +E +G RV LI+ E EE L E L++ N + +T + +
Sbjct: 121 ARGNKDIGTTGKGIGPSYTDKMERSGIRVCDLIHKEVFEENLKETLEVKNKI-ITEVFGE 179
Query: 155 KGL--------YFQIVEKI--FKHE--AIYERK----KQSLVHGITGDVVQKDYYTWPYH 198
+ L Y EK+ F + I +K K+ L G G ++ DY T+PY
Sbjct: 180 EALDYDEIYNEYLGYAEKLRPFVKDISVIVNKKIKDGKEVLFEGAQGTLLDIDYGTYPYV 239
Query: 199 FSGS 202
S S
Sbjct: 240 TSSS 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,510,676
Number of Sequences: 539616
Number of extensions: 3574139
Number of successful extensions: 12339
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 12226
Number of HSP's gapped (non-prelim): 130
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)