Your job contains 1 sequence.
>028818
MLAKEPGAGSTFDLPEEVLQVLPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLA
EKDSRIAELQSQIESIYSSLSDKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRK
TLVQSLKDDEDASTGATRIAKPTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEEREPECR
SKSSSFFLNSNIKLVLCLSTTFC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028818
(203 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006472 - symbol:AT4G15545 "AT4G15545" speci... 466 3.1e-44 1
TAIR|locus:2205230 - symbol:AT1G56080 "AT1G56080" species... 286 3.6e-25 1
TAIR|locus:2017933 - symbol:AT1G16520 "AT1G16520" species... 276 4.2e-24 1
MGI|MGI:96687 - symbol:Krt12 "keratin 12" species:10090 "... 124 1.7e-05 1
ZFIN|ZDB-GENE-081104-2 - symbol:tpra "translocated promot... 129 2.3e-05 1
DICTYBASE|DDB_G0292068 - symbol:frpA "fimbrin-related pro... 126 2.9e-05 1
RGD|1304805 - symbol:Krt12 "keratin 12" species:10116 "Ra... 121 3.7e-05 1
UNIPROTKB|Q6IFW5 - symbol:Krt12 "Keratin, type I cytoskel... 121 3.7e-05 1
DICTYBASE|DDB_G0286985 - symbol:zipA "zipper-like domain-... 122 8.3e-05 1
MGI|MGI:1914738 - symbol:Calcoco1 "calcium binding and co... 115 0.00036 1
UNIPROTKB|F1PYV0 - symbol:KRT12 "Uncharacterized protein"... 113 0.00041 1
MGI|MGI:1194490 - symbol:Diap1 "diaphanous homolog 1 (Dro... 116 0.00056 1
UNIPROTKB|E2R7W6 - symbol:KRT42 "Uncharacterized protein"... 111 0.00060 1
RGD|619812 - symbol:Calcoco1 "calcium binding and coiled ... 113 0.00062 1
>TAIR|locus:505006472 [details] [associations]
symbol:AT4G15545 "AT4G15545" species:3702 "Arabidopsis
thaliana" [GO:0006833 "water transport" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009750 "response to fructose
stimulus" evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161541
EMBL:Z97339 UniGene:At.23338 UniGene:At.63697 IPI:IPI00538972
PIR:B71420 EMBL:AY039512 EMBL:AY057513 EMBL:AY057742 EMBL:AY136431
EMBL:BT000212 EMBL:AY087027 IPI:IPI00542550 RefSeq:NP_567470.1
IntAct:Q93W28 STRING:Q93W28 PRIDE:Q93W28 EnsemblPlants:AT4G15545.1
GeneID:827228 KEGG:ath:AT4G15545 TAIR:At4g15545 eggNOG:NOG46317
HOGENOM:HOG000005702 InParanoid:Q93W28 OMA:DLYTIFE PhylomeDB:Q93W28
ProtClustDB:CLSN2705303 Genevestigator:Q93W28 Uniprot:Q93W28
Length = 337
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 106/182 (58%), Positives = 130/182 (71%)
Query: 9 GS-TFDLPEEVLQVLPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIA 67
GS +FDLP+E+LQVLPSDPFEQLDVARKITSIA+STRVS LESE S LR LAEK+
Sbjct: 18 GSRSFDLPDELLQVLPSDPFEQLDVARKITSIALSTRVSALESESSDLRELLAEKEKEFE 77
Query: 68 ELQSQIESIYSSLSD---KLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQ 124
ELQS +ES+ +SLSD KL A +KE L +EN +L+NTV++LQRDVSKLE FRKTL+
Sbjct: 78 ELQSHVESLEASLSDAFHKLSLADGEKENLIRENASLSNTVKRLQRDVSKLEGFRKTLMM 137
Query: 125 SLKDDEDASTGATRI-AKPTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEEREPECRSKS 183
SL+DD D + G T+I AKPTPN+DD P+ SS+ SQ + A + E + S
Sbjct: 138 SLQDD-DQNAGTTQIIAKPTPNDDDTPFQPSRHSSIQSQQASEAIEPAATDNENDAPKPS 196
Query: 184 SS 185
S
Sbjct: 197 LS 198
>TAIR|locus:2205230 [details] [associations]
symbol:AT1G56080 "AT1G56080" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
HOGENOM:HOG000005702 ProtClustDB:CLSN2705303 EMBL:BT028895
IPI:IPI00536199 RefSeq:NP_176004.2 UniGene:At.11793
ProteinModelPortal:Q0IGM5 IntAct:Q0IGM5 PaxDb:Q0IGM5 PRIDE:Q0IGM5
EnsemblPlants:AT1G56080.1 GeneID:842059 KEGG:ath:AT1G56080
TAIR:At1g56080 eggNOG:NOG307108 InParanoid:Q0IGM5 OMA:SHYDIRM
PhylomeDB:Q0IGM5 Genevestigator:Q0IGM5 Uniprot:Q0IGM5
Length = 310
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 62/161 (38%), Positives = 101/161 (62%)
Query: 8 AGSTFDLPEEVLQVLPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIA 67
+G F+L +E+L V+P+DP++QLD+ARKITS+AI++RVS+LES+ S LR +L EKD +
Sbjct: 4 SGGDFNLSDEILAVIPTDPYDQLDLARKITSMAIASRVSNLESQVSGLRQKLLEKDRLVH 63
Query: 68 ELQSQIES---IYSSLSDKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQ 124
EL+ ++ S +Y L + +L++E ++L T +KL RD +KLE F++ L+Q
Sbjct: 64 ELEDRVSSFERLYHEADSSLKNVVDENMKLTQERDSLAITAKKLGRDYAKLEAFKRQLMQ 123
Query: 125 SLKDDEDASTGATRIAKPTPNEDDAAVAPTGTSSVHSQISE 165
SL DD + T + +D+ + G+ S + +SE
Sbjct: 124 SLNDDNPSQTETADVRMVPRGKDENS---NGSYSNNEGLSE 161
>TAIR|locus:2017933 [details] [associations]
symbol:AT1G16520 "AT1G16520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC006341
HOGENOM:HOG000005702 ProtClustDB:CLSN2705303 EMBL:BT008348
EMBL:AK118669 IPI:IPI00535008 RefSeq:NP_564000.2 UniGene:At.28238
IntAct:Q9SA50 PaxDb:Q9SA50 PRIDE:Q9SA50 EnsemblPlants:AT1G16520.1
GeneID:838222 KEGG:ath:AT1G16520 TAIR:At1g16520 eggNOG:NOG270474
InParanoid:Q9SA50 OMA:RMDGKEF PhylomeDB:Q9SA50
Genevestigator:Q9SA50 Uniprot:Q9SA50
Length = 325
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 65/153 (42%), Positives = 94/153 (61%)
Query: 12 FDLPEEVLQVLPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIAELQ- 70
F+LPEEVL V+P DPFEQLD+ARKITS+AI++RVS+L+SE LR +L K+S + EL+
Sbjct: 8 FELPEEVLSVIPMDPFEQLDLARKITSMAIASRVSNLDSEVVELRQKLLGKESVVRELEE 67
Query: 71 --SQIESIYSSLSDKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKD 128
S++E +L D L+KE ++L TV KL RD++KLE F++ L++SL D
Sbjct: 68 KASRLERDCREADSRLKVVLEDNMNLTKEKDSLAMTVTKLTRDLAKLETFKRQLIKSLSD 127
Query: 129 DEDASTGATRIAKPTPNEDDAAVAPTGTSSVHS 161
+ T I T ++ + G + HS
Sbjct: 128 ESGPQTEPVDIR--TCDQPGSYPGKDGRINAHS 158
>MGI|MGI:96687 [details] [associations]
symbol:Krt12 "keratin 12" species:10090 "Mus musculus"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA] [GO:0060429
"epithelium development" evidence=IMP] [GO:0061303 "cornea
development in camera-type eye" evidence=IMP] InterPro:IPR001664
InterPro:IPR002957 PRINTS:PR01248 MGI:MGI:96687 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GO:GO:0061303 HOGENOM:HOG000230975 GO:GO:0060429 KO:K07604
OrthoDB:EOG4P8FJH CTD:3859 eggNOG:NOG148849 EMBL:U02880 EMBL:U08095
EMBL:AL591165 EMBL:BC131911 IPI:IPI00230576 IPI:IPI00828816
PIR:A55033 RefSeq:NP_034791.2 UniGene:Mm.436651
ProteinModelPortal:Q64291 SMR:Q64291 STRING:Q64291
PhosphoSite:Q64291 PRIDE:Q64291 Ensembl:ENSMUST00000017741
GeneID:268482 KEGG:mmu:268482 UCSC:uc007lis.1
GeneTree:ENSGT00560000077101 InParanoid:Q64291 NextBio:392327
Bgee:Q64291 CleanEx:MM_KRT12 Genevestigator:Q64291
GermOnline:ENSMUSG00000020912 Uniprot:Q64291
Length = 487
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 22 LPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIAELQSQIESIYSSLS 81
L S E D+ R + ++ I + S L + S+L LAE + SQ++ + SL
Sbjct: 331 LQSSKSEVTDLKRMVQNLEIELQ-SQLAMK-SSLEGSLAETEGGYCCQLSQVQQLIGSLE 388
Query: 82 DKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDEDASTGATRIAK 141
++L Q +AD ER + +++ L +L+ ++ E +R+ L + D + + ++K
Sbjct: 389 EQLQQVRADAERQNADHQRLLGVKARLEMEI---ETYRRLLEGDSQGDGFDESSSLSVSK 445
Query: 142 PTPNEDDAAVAPTGTSSVHSQISEGGN----SSFAEEREPE 178
P D++ P T + + + E N SS +E E E
Sbjct: 446 PQTPSVDSSKDPNKTRKIKTVVQEIVNGEVVSSQVQELEEE 486
>ZFIN|ZDB-GENE-081104-2 [details] [associations]
symbol:tpra "translocated promoter region a (to
activated MET oncogene)" species:7955 "Danio rerio" [GO:0005643
"nuclear pore" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] InterPro:IPR012929 Pfam:PF07926
ZFIN:ZDB-GENE-081104-2 GO:GO:0005643 GO:GO:0006606
GeneTree:ENSGT00700000104019 EMBL:CU570979 EMBL:CU638698
EMBL:CU638707 EMBL:FP016011 IPI:IPI00834509
Ensembl:ENSDART00000074850 Uniprot:F1Q9Z8
Length = 1926
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/143 (24%), Positives = 72/143 (50%)
Query: 44 RVSDLESEHSALRSQLAEKDSRIAELQSQIESIYSSLSDKLGQAQADKERLSKENEALTN 103
R+ L E L++++A + I QSQ+++ L D LG+ +++ L KE EA T
Sbjct: 925 RIQQLTEETGKLKNEVARSQASITTAQSQVQN----LQDSLGKVTTERDSLKKELEAKTL 980
Query: 104 TVRKLQRDVSKLE-VFR--KTLVQSLKDDEDASTGATRIAKPTPNEDDAAVAPTGTSSVH 160
+++ + +++++ + R KT + LK+ D A +KP ++D + ++
Sbjct: 981 DIQEKVKTITQVKKIGRRYKTQYEELKEQHDKMV-AEAASKPAQEQEDRQASVQEIQNLK 1039
Query: 161 SQISEGGNSSFAEEREPECRSKS 183
S +S+ N + E + +C K+
Sbjct: 1040 SSLSQTQNRTSELETQLDCIQKT 1062
>DICTYBASE|DDB_G0292068 [details] [associations]
symbol:frpA "fimbrin-related protein" species:44689
"Dictyostelium discoideum" [GO:0003779 "actin binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001589
InterPro:IPR001715 Pfam:PF00307 PROSITE:PS00020 PROSITE:PS50021
SMART:SM00033 dictyBase:DDB_G0292068 GenomeReviews:CM000155_GR
EMBL:AAFI02000187 eggNOG:COG5069 Gene3D:1.10.418.10 SUPFAM:SSF47576
RefSeq:XP_629809.1 ProteinModelPortal:Q54DR3
EnsemblProtists:DDB0232223 GeneID:8628490 KEGG:ddi:DDB_G0292068
InParanoid:Q54DR3 OMA:KENCLAR ProtClustDB:CLSZ2735176
Uniprot:Q54DR3
Length = 1096
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 28 EQLDVARKITSIAISTRVSDLESEHSALRSQLAEK----DSRIAELQSQIESIYSSLSDK 83
E LD+ K IS R++ E E ++ + QL EK + +I + + ++ESI S D
Sbjct: 839 EDLDIKEK----RISERLAKTEKETTS-KKQLVEKKEKENQKIQQEKQKLESILSQAKDM 893
Query: 84 LGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDED 131
+G + DK++ KE E + N + L V +K+L QS KD ED
Sbjct: 894 IGDIKKDKDQTIKEREIIQNKHKTLMETVGSTTKTKKSLEQSKKDLED 941
>RGD|1304805 [details] [associations]
symbol:Krt12 "keratin 12" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005882 "intermediate
filament" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
RGD:1304805 GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 HSSP:P08670 KO:K07604 CTD:3859
eggNOG:NOG148849 EMBL:AABR03075828 EMBL:BK004033 IPI:IPI00421805
RefSeq:NP_001008761.1 UniGene:Rn.94852 ProteinModelPortal:Q6IFW5
STRING:Q6IFW5 PRIDE:Q6IFW5 GeneID:360625 KEGG:rno:360625
NextBio:673505 Genevestigator:Q6IFW5 Uniprot:Q6IFW5
Length = 456
Score = 121 (47.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 40/158 (25%), Positives = 74/158 (46%)
Query: 22 LPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIAELQSQIESIYSSLS 81
L S E D+ R + ++ I + S L + S+L LAE + SQ++ + SL
Sbjct: 300 LQSSKSEVTDLKRMVQNLEIELQ-SQLAMK-SSLEGSLAETEGGYCCQLSQMQQLIGSLE 357
Query: 82 DKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDE-DASTGATRIA 140
++L Q +AD ER +++++ L +L+ ++ E +R+ L + D D S T ++
Sbjct: 358 EQLQQLRADAERQNEDHQRLLGVKARLEMEI---ETYRRLLEGDTQGDGFDESLSLT-VS 413
Query: 141 KPTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEEREPE 178
KP D++ P T + + + E N + E
Sbjct: 414 KPQAPSVDSSKDPNKTRKIKTVVQEIVNGEVVSSQVQE 451
>UNIPROTKB|Q6IFW5 [details] [associations]
symbol:Krt12 "Keratin, type I cytoskeletal 12"
species:10116 "Rattus norvegicus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005882 "intermediate filament"
evidence=IEA] InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248
RGD:1304805 GO:GO:0005198 GO:GO:0005882 HOVERGEN:HBG013015
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 HSSP:P08670 KO:K07604 CTD:3859
eggNOG:NOG148849 EMBL:AABR03075828 EMBL:BK004033 IPI:IPI00421805
RefSeq:NP_001008761.1 UniGene:Rn.94852 ProteinModelPortal:Q6IFW5
STRING:Q6IFW5 PRIDE:Q6IFW5 GeneID:360625 KEGG:rno:360625
NextBio:673505 Genevestigator:Q6IFW5 Uniprot:Q6IFW5
Length = 456
Score = 121 (47.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 40/158 (25%), Positives = 74/158 (46%)
Query: 22 LPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIAELQSQIESIYSSLS 81
L S E D+ R + ++ I + S L + S+L LAE + SQ++ + SL
Sbjct: 300 LQSSKSEVTDLKRMVQNLEIELQ-SQLAMK-SSLEGSLAETEGGYCCQLSQMQQLIGSLE 357
Query: 82 DKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDE-DASTGATRIA 140
++L Q +AD ER +++++ L +L+ ++ E +R+ L + D D S T ++
Sbjct: 358 EQLQQLRADAERQNEDHQRLLGVKARLEMEI---ETYRRLLEGDTQGDGFDESLSLT-VS 413
Query: 141 KPTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEEREPE 178
KP D++ P T + + + E N + E
Sbjct: 414 KPQAPSVDSSKDPNKTRKIKTVVQEIVNGEVVSSQVQE 451
>DICTYBASE|DDB_G0286985 [details] [associations]
symbol:zipA "zipper-like domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0286985 GO:GO:0005615
GenomeReviews:CM000153_GR EMBL:AAFI02000093 RefSeq:XP_637450.1
EnsemblProtists:DDB0191488 GeneID:8625896 KEGG:ddi:DDB_G0286985
InParanoid:Q54L07 OMA:LQSTKDQ Uniprot:Q54L07
Length = 1024
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 37/110 (33%), Positives = 60/110 (54%)
Query: 28 EQLDVARKITSIAISTRVSDLESEHSALRS---QLAEKDSRIAELQSQIESIYSSLSDKL 84
EQL T +S+ L S+ S L+S QL+ KDS+I ++S ++S+ LS K
Sbjct: 630 EQLSSQSSNTDSELSSVKDQLLSKDSELKSKDEQLSNKDSQIKSIESDLQSVKDQLSSKD 689
Query: 85 GQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDEDAST 134
+ Q+ K++LS ++E L+N +++ S L+ + L S KD E ST
Sbjct: 690 QELQSTKDQLSSKDEQLSNKDTQIKSIESDLQSVKDQL--SSKDQELQST 737
>MGI|MGI:1914738 [details] [associations]
symbol:Calcoco1 "calcium binding and coiled coil domain 1"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=ISO]
[GO:0003713 "transcription coactivator activity" evidence=ISO;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007165 "signal
transduction" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] MGI:MGI:1914738 GO:GO:0005737 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0003682
GO:GO:0044212 GO:GO:0000790 GO:GO:0003713 GO:GO:0030374 CTD:57658
eggNOG:NOG114876 HOGENOM:HOG000111283 HOVERGEN:HBG107573
OrthoDB:EOG4NZTTD InterPro:IPR012852 Pfam:PF07888
GeneTree:ENSGT00530000063216 OMA:YDMASGF GO:GO:0030518
EMBL:AY131329 EMBL:AK007393 EMBL:AK035598 EMBL:AK220400
EMBL:BC054783 IPI:IPI00461826 RefSeq:NP_080468.1 UniGene:Mm.71682
ProteinModelPortal:Q8CGU1 IntAct:Q8CGU1 STRING:Q8CGU1
PhosphoSite:Q8CGU1 PaxDb:Q8CGU1 PRIDE:Q8CGU1
Ensembl:ENSMUST00000023818 GeneID:67488 KEGG:mmu:67488
UCSC:uc007xws.2 InParanoid:Q8CGU1 NextBio:324722 Bgee:Q8CGU1
CleanEx:MM_CALCOCO1 Genevestigator:Q8CGU1 Uniprot:Q8CGU1
Length = 691
Score = 115 (45.5 bits), Expect = 0.00036, P = 0.00036
Identities = 42/163 (25%), Positives = 81/163 (49%)
Query: 18 VLQVLPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLA-EKDSRIAELQSQIESI 76
+LQ + ++ + L ++ +I + + V + ++ +++LA EKDS + +L S+ +
Sbjct: 415 LLQSMEAEKDKILKLSAEI--LRLEKTVQEERTQSHVFKTELAREKDSSLVQL-SESKRE 471
Query: 77 YSSLSDKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDEDASTGA 136
+ L L Q +KE+L E + L +RKL+ + K+ K + +DE+A+ G
Sbjct: 472 LTELRSALRVLQKEKEQLQTEKQELLEYMRKLEARLEKV-ADEKWTEDAATEDEEATAGL 530
Query: 137 TRIAKPTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEE--REP 177
+ A T +ED++ P + E GN+S + REP
Sbjct: 531 SCPASLTDSEDES---PEDMRLPSYGLCESGNTSSSPPGPREP 570
>UNIPROTKB|F1PYV0 [details] [associations]
symbol:KRT12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
GeneTree:ENSGT00560000077101 EMBL:AAEX03006460
Ensembl:ENSCAFT00000025387 OMA:REISTHT Uniprot:F1PYV0
Length = 509
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 38/157 (24%), Positives = 72/157 (45%)
Query: 22 LPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIAELQSQIESIYSSLS 81
L S E D+ R + ++ I + S L ++ S L + LAE + SQ++ + SL
Sbjct: 355 LQSSKSEVTDLRRALQNLEIELQ-SQLATKKS-LEASLAEVEGDYCGQLSQVQQLIGSLE 412
Query: 82 DKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDEDASTGATRIAK 141
++L Q +AD ER + +++ L N +L+ ++ E +R+ L + D T +K
Sbjct: 413 EQLLQVRADTERQNADHQRLLNAKARLEMEI---ETYRRLLDGEAQGDGFDETLYVTESK 469
Query: 142 PTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEEREPE 178
D++ PT + + + + E N + E
Sbjct: 470 SQTQSIDSSKDPTKSRRIKTIVQEVVNGEVVSSQVQE 506
>MGI|MGI:1194490 [details] [associations]
symbol:Diap1 "diaphanous homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005522 "profilin binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008360 "regulation of cell
shape" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016043 "cellular component organization" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=IDA] [GO:0030036 "actin
cytoskeleton organization" evidence=IDA] [GO:0030041 "actin
filament polymerization" evidence=IDA] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=IDA] [GO:0032587 "ruffle membrane"
evidence=IDA] [GO:0032886 "regulation of microtubule-based process"
evidence=ISO] [GO:0035372 "protein localization to microtubule"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042995 "cell projection" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0044325 "ion channel binding"
evidence=ISO;IPI] [GO:0051279 "regulation of release of sequestered
calcium ion into cytosol" evidence=ISO] [GO:0071420 "cellular
response to histamine" evidence=ISO] [GO:0072686 "mitotic spindle"
evidence=ISO] InterPro:IPR003104 InterPro:IPR010472
InterPro:IPR010473 InterPro:IPR016024 Pfam:PF06367 Pfam:PF06371
SMART:SM00498 MGI:MGI:1194490 Pfam:PF02181 GO:GO:0005737
GO:GO:0003779 SUPFAM:SSF48371 GO:GO:0008360 GO:GO:0005856
GO:GO:0043005 GO:GO:0030041 GO:GO:0007605 GO:GO:0032587
GO:GO:0031175 GO:GO:0005522 InterPro:IPR014767 InterPro:IPR015425
InterPro:IPR014768 SUPFAM:SSF101447 PROSITE:PS51231 PROSITE:PS51444
PROSITE:PS51232 eggNOG:NOG149898 PDB:3EG5 PDBsum:3EG5 GO:GO:0032886
HOGENOM:HOG000293231 HOVERGEN:HBG051357 KO:K05740
InterPro:IPR010465 InterPro:IPR009408 Pfam:PF06345 Pfam:PF06346
EMBL:U96963 IPI:IPI00808370 PIR:T31065 RefSeq:NP_031884.1
UniGene:Mm.195916 PDB:1V9D PDB:1Z2C PDB:2BAP PDB:2BNX PDB:2F31
PDB:2V8F PDB:3O4X PDB:3OBV PDBsum:1V9D PDBsum:1Z2C PDBsum:2BAP
PDBsum:2BNX PDBsum:2F31 PDBsum:2V8F PDBsum:3O4X PDBsum:3OBV
ProteinModelPortal:O08808 SMR:O08808 DIP:DIP-29028N IntAct:O08808
STRING:O08808 PhosphoSite:O08808 PaxDb:O08808 PRIDE:O08808
Ensembl:ENSMUST00000115634 GeneID:13367 KEGG:mmu:13367
UCSC:uc008erj.1 CTD:13367 GeneTree:ENSGT00700000104080
OrthoDB:EOG4VQ9NP EvolutionaryTrace:O08808 NextBio:283706
Bgee:O08808 CleanEx:MM_DIAP1 Genevestigator:O08808
GermOnline:ENSMUSG00000024456 GO:GO:0017048 Uniprot:O08808
Length = 1255
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 29 QLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIAELQSQIESIYSSLSDKLGQAQ 88
Q+D+ R + + T+V E++ + L +L + + ELQ +++ + + KL Q
Sbjct: 449 QIDIERLVDQMIDKTKVEKSEAKATELEKKLDSELTARHELQVEMKKMENDFEQKLQDLQ 508
Query: 89 ADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKD--DEDASTGATRIAKPTPNE 146
+K+ L E + +T + L+ +VSKL L + L+D +E AS A +A P+ +
Sbjct: 509 GEKDALDSEKQQITAQKQDLEAEVSKLTGEVAKLSKELEDAKNEMASLSAVVVA-PSVSS 567
Query: 147 DDAAVAP 153
AAV P
Sbjct: 568 S-AAVPP 573
>UNIPROTKB|E2R7W6 [details] [associations]
symbol:KRT42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005882 "intermediate filament" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR001664 InterPro:IPR002957 PRINTS:PR01248 GO:GO:0005198
GO:GO:0005882 InterPro:IPR016044 InterPro:IPR018039
PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226 InterPro:IPR009053
SUPFAM:SSF46579 GeneTree:ENSGT00610000085921 OMA:DWYKKQG
EMBL:AAEX03006458 Ensembl:ENSCAFT00000025265 Uniprot:E2R7W6
Length = 453
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00060
Identities = 40/169 (23%), Positives = 87/169 (51%)
Query: 11 TFDLPEEVL---QVLPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLAEKDSRIA 67
T +L EV + L S E ++ R + ++ I + S L S ++L LAE ++R
Sbjct: 290 TEELNREVATNTEALQSSRTEITELRRSVQNLEIELQ-SQL-SMKASLEGSLAETEARYG 347
Query: 68 ELQSQIESIYSSLSDKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLK 127
+Q++ + SS+ +LG+ + D ER ++E + L + +L+++++ +R+ L++
Sbjct: 348 AQLAQLQGLISSIEQQLGELRCDMERQNQEYQVLLDVKTRLEQEIA---TYRR-LLEG-- 401
Query: 128 DDEDAST--GATRIAKPTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEE 174
+D +T ++ I++PT +A V ++ ++ +G S E+
Sbjct: 402 EDAHLATQYSSSLISQPTR---EATVTTRQVRTIMEEVQDGKVVSSREQ 447
>RGD|619812 [details] [associations]
symbol:Calcoco1 "calcium binding and coiled coil domain 1"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003712
"transcription cofactor activity" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] RGD:619812 GO:GO:0005737 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0044212
GO:GO:0000790 GO:GO:0030374 CTD:57658 eggNOG:NOG114876
HOGENOM:HOG000111283 HOVERGEN:HBG107573 OrthoDB:EOG4NZTTD
InterPro:IPR012852 Pfam:PF07888 GeneTree:ENSGT00530000063216
OMA:YDMASGF GO:GO:0030518 EMBL:AY078385 EMBL:BC081722
IPI:IPI00200139 RefSeq:NP_631929.1 RefSeq:XP_003750466.1
UniGene:Rn.162973 ProteinModelPortal:Q66HR5 PRIDE:Q66HR5
Ensembl:ENSRNOT00000021523 GeneID:100912282 GeneID:246047
KEGG:rno:100912282 KEGG:rno:246047 InParanoid:Q66HR5 NextBio:623311
Genevestigator:Q66HR5 Uniprot:Q66HR5
Length = 691
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 45/173 (26%), Positives = 84/173 (48%)
Query: 18 VLQVLPSDPFEQLDVARKITSIAISTRVSDLESEHSALRSQLA-EKDSRIAELQSQIESI 76
+LQ + ++ + L ++ +I + + V + S+ +++LA EKDS + +L S+ +
Sbjct: 415 LLQSMEAEKDKILKLSAEI--LRLEKTVQEERSQSHMFKTELAREKDSSLVQL-SESKRE 471
Query: 77 YSSLSDKLGQAQADKERLSKENEALTNTVRKLQRDVSKLEVFRKTLVQSLKDDEDASTGA 136
+ L L Q +KE+L E + L +RKL+ + K+ K + +DE+A+ G
Sbjct: 472 LTELRSALRVLQKEKEQLQTEKQELLEYMRKLEARLEKV-ADEKWNEDAATEDEEATAGL 530
Query: 137 TRIAKPTPNEDDAAVAPTGTSSVHSQISEGGNSSFAEEREPECRSKSSSFFLN 189
+ A T +ED++ P + E GN+S + P R SS +N
Sbjct: 531 SCPAALTDSEDES---PEDMRLPSYGLCERGNTSSSP---PGPRESSSLVVIN 577
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.123 0.322 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 203 203 0.00092 111 3 10 23 0.44 33
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 578 (61 KB)
Total size of DFA: 186 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.05u 0.16s 42.21t Elapsed: 00:00:01
Total cpu time: 42.05u 0.16s 42.21t Elapsed: 00:00:01
Start: Mon May 20 19:23:56 2013 End: Mon May 20 19:23:57 2013