Query 028821
Match_columns 203
No_of_seqs 122 out of 1250
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 04:19:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028821hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 99.9 1.8E-26 6.1E-31 193.3 14.2 162 2-175 157-323 (433)
2 3ct9_A Acetylornithine deacety 99.9 2.4E-26 8.3E-31 188.2 11.9 176 2-200 118-294 (356)
3 3io1_A Aminobenzoyl-glutamate 99.9 1.1E-26 3.8E-31 195.4 9.6 155 2-175 163-325 (445)
4 1vgy_A Succinyl-diaminopimelat 99.9 3.4E-26 1.2E-30 189.5 12.4 187 2-200 116-308 (393)
5 3tx8_A Succinyl-diaminopimelat 99.9 1.3E-26 4.5E-31 190.4 9.7 163 2-174 116-278 (369)
6 3ram_A HMRA protein; two-domai 99.9 2.5E-26 8.7E-31 190.4 9.2 181 2-199 107-293 (394)
7 3isz_A Succinyl-diaminopimelat 99.9 2.7E-25 9.2E-30 182.7 14.4 186 3-200 114-305 (377)
8 1xmb_A IAA-amino acid hydrolas 99.9 1.8E-25 6.1E-30 186.6 10.8 156 2-175 130-293 (418)
9 2f7v_A Aectylcitrulline deacet 99.9 2E-25 6.7E-30 183.5 10.2 155 11-178 121-277 (369)
10 1ysj_A Protein YXEP; M20 famil 99.9 5.7E-25 2E-29 182.8 10.0 158 2-175 136-301 (404)
11 2rb7_A Peptidase, M20/M25/M40 99.9 2.8E-25 9.5E-30 182.4 7.6 174 2-200 113-294 (364)
12 1cg2_A Carboxypeptidase G2; me 99.9 2.1E-24 7.1E-29 178.8 9.2 151 2-172 132-286 (393)
13 3rza_A Tripeptidase; phosphory 99.9 4.4E-24 1.5E-28 177.0 7.4 151 2-175 142-294 (396)
14 3gb0_A Peptidase T; NP_980509. 99.9 6E-24 2E-28 174.8 6.2 151 2-175 121-274 (373)
15 3n5f_A L-carbamoylase, N-carba 99.9 1.5E-22 5E-27 168.5 9.5 161 2-175 103-309 (408)
16 3dlj_A Beta-Ala-His dipeptidas 99.9 4.7E-22 1.6E-26 168.9 12.6 166 2-175 156-377 (485)
17 2pok_A Peptidase, M20/M25/M40 99.9 1.4E-22 4.8E-27 171.9 8.5 193 2-200 160-407 (481)
18 3pfe_A Succinyl-diaminopimelat 99.9 2.5E-22 8.4E-27 170.1 9.1 167 2-174 143-363 (472)
19 3khx_A Putative dipeptidase sa 99.9 3.7E-22 1.3E-26 169.8 8.2 189 2-201 151-420 (492)
20 1z2l_A Allantoate amidohydrola 99.9 3E-22 1E-26 167.2 6.7 162 2-175 107-313 (423)
21 2zog_A Cytosolic non-specific 99.9 1.2E-21 4.3E-26 165.9 10.4 167 2-174 149-369 (479)
22 2v8h_A Beta-alanine synthase; 99.9 8.7E-22 3E-26 166.8 8.7 156 2-175 137-344 (474)
23 3ife_A Peptidase T; metallopep 99.9 3E-22 1E-26 167.9 5.6 149 2-174 179-329 (434)
24 1fno_A Peptidase T; metallo pe 99.8 4.8E-20 1.6E-24 153.6 8.8 149 2-175 153-303 (417)
25 2qyv_A XAA-His dipeptidase; YP 99.8 1.7E-19 5.7E-24 153.2 10.2 118 10-151 133-271 (487)
26 1lfw_A PEPV; hydrolase, dipept 99.8 6.3E-19 2.2E-23 148.9 10.0 187 2-201 132-396 (470)
27 3mru_A Aminoacyl-histidine dip 99.8 1.3E-18 4.6E-23 147.8 9.6 137 9-172 135-293 (490)
28 1q7l_A Aminoacylase-1; catalys 98.4 8.2E-09 2.8E-13 77.3 -2.7 68 2-71 126-197 (198)
29 4h2k_A Succinyl-diaminopimelat 98.2 4.8E-07 1.6E-11 70.8 2.2 64 2-67 116-184 (269)
30 3t68_A Succinyl-diaminopimelat 98.1 1.8E-06 6.1E-11 67.4 3.1 64 2-67 116-184 (268)
31 2fvg_A Endoglucanase; TM1049, 97.8 3.3E-06 1.1E-10 68.2 0.2 62 10-92 184-245 (340)
32 2wyr_A Cobalt-activated peptid 96.3 0.0019 6.6E-08 51.6 3.0 47 2-58 186-232 (332)
33 1rtq_A Bacterial leucyl aminop 96.1 0.0015 5E-08 51.6 1.2 52 2-56 130-181 (299)
34 2gre_A Deblocking aminopeptida 96.0 0.0011 3.8E-08 53.5 -0.0 47 2-58 199-245 (349)
35 1tkj_A Aminopeptidase, SGAP; d 95.6 0.0042 1.4E-07 48.6 1.8 52 2-56 110-162 (284)
36 1vhe_A Aminopeptidase/glucanas 95.6 0.0046 1.6E-07 50.3 2.0 45 3-57 198-242 (373)
37 3mru_A Aminoacyl-histidine dip 95.4 0.0088 3E-07 50.5 3.3 70 123-201 347-416 (490)
38 1y0y_A FRV operon protein FRVX 95.4 0.0065 2.2E-07 49.0 2.2 39 11-57 200-238 (353)
39 3tc8_A Leucine aminopeptidase; 93.1 0.073 2.5E-06 42.1 3.7 52 2-55 140-201 (309)
40 3gux_A Putative Zn-dependent e 92.7 0.078 2.7E-06 42.1 3.4 52 2-55 142-204 (314)
41 3iib_A Peptidase M28; YP_92679 92.6 0.047 1.6E-06 45.5 2.0 36 2-40 282-317 (444)
42 1ylo_A Hypothetical protein SF 89.8 0.22 7.5E-06 39.7 3.3 39 11-57 189-227 (348)
43 1vho_A Endoglucanase; structur 87.7 0.18 6.1E-06 40.3 1.4 38 11-56 192-229 (346)
44 3kl9_A PEPA, glutamyl aminopep 87.1 0.28 9.7E-06 39.5 2.2 39 10-56 201-239 (355)
45 2afw_A Glutaminyl-peptide cycl 86.4 0.27 9.3E-06 39.1 1.8 28 9-39 155-190 (329)
46 2ek8_A Aminopeptidase; metallo 85.4 0.4 1.4E-05 39.4 2.3 50 2-56 253-303 (421)
47 4fuu_A Leucine aminopeptidase; 83.4 1.1 3.6E-05 35.3 3.9 52 2-55 140-202 (309)
48 2vpu_A TET3, 354AA long hypoth 80.7 0.6 2E-05 37.6 1.6 37 11-55 203-239 (354)
49 3cpx_A Aminopeptidase, M42 fam 79.6 1.3 4.4E-05 34.9 3.2 39 15-57 183-221 (321)
50 4f9u_A CG32412; alpha/beta hyd 79.1 1.6 5.5E-05 34.2 3.6 32 8-39 127-163 (312)
51 3kas_A Transferrin receptor pr 77.8 0.81 2.8E-05 39.9 1.6 31 7-40 320-350 (640)
52 2wzn_A TET3, 354AA long hypoth 76.9 0.019 6.6E-07 44.8 -8.3 84 10-99 114-198 (354)
53 3fed_A Glutamate carboxypeptid 75.9 1.1 3.6E-05 39.6 1.8 30 7-39 365-394 (707)
54 3isx_A Endoglucanase; TM1050, 74.9 0.92 3.1E-05 36.4 1.1 37 12-56 198-234 (343)
55 3pb6_X Glutaminyl-peptide cycl 73.9 1.5 5E-05 35.0 2.0 28 9-39 159-194 (330)
56 4fai_A CG5976, isoform B; alph 73.8 2.2 7.7E-05 33.8 3.1 32 8-39 151-187 (330)
57 3kz5_E Protein SOPB; partition 62.0 13 0.00045 20.6 3.7 30 142-175 20-49 (52)
58 2qyv_A XAA-His dipeptidase; YP 51.7 20 0.00067 29.7 4.9 69 123-200 345-413 (487)
59 1oey_A P67-PHOX, neutrophil cy 48.5 7.8 0.00027 24.1 1.5 34 145-178 12-45 (83)
60 2jvf_A De novo protein M7; tet 45.6 35 0.0012 20.3 4.0 34 143-176 15-48 (96)
61 2ijz_A Probable M18-family ami 29.5 45 0.0015 27.4 3.6 30 2-36 245-274 (428)
62 2glj_A Probable M18-family ami 24.1 26 0.0009 29.1 1.3 24 3-27 272-295 (461)
63 1ip9_A BEM1 protein; ubiquitin 22.5 90 0.0031 19.3 3.1 24 149-172 24-47 (85)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.94 E-value=1.8e-26 Score=193.35 Aligned_cols=162 Identities=12% Similarity=0.145 Sum_probs=137.7
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCCCceeeeeeeEEEEEEEeecCCCc
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Hs 81 (203)
++|++.+.+++++|.|+|++|||.|+ .|++.+++.+ +++|++|+.||+...+.++++|..+++|+++|+++|+
T Consensus 157 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 229 (433)
T 3pfo_A 157 DAIRTAGYAPDARVHVQTVTEEESTG---NGALSTLMRG----YRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHV 229 (433)
T ss_dssp HHHHHTTEEESSCEEEEEESCTTTTC---HHHHHHHHTT----CCCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBG
T ss_pred HHHHHcCCCCCccEEEEEEecCccCC---hhHHHHHhcC----CCCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCcc
Confidence 56777777789999999999999987 6999998765 4678999999988888899999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcC-----CCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCC
Q 028821 82 GLPHKAINPLELAMEALKVIQTRFYKD-----FPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPF 156 (203)
Q Consensus 82 s~p~~g~NAi~~~~~~l~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~ 156 (203)
|.|+.|.||+..+++++..|+.+..+. .++. ...+..+.+++++.|+ ||.+.|+||++|++.+++|++++
T Consensus 230 ~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~~~~ 304 (433)
T 3pfo_A 230 AYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPW----FGQVKNPIKFNVGIIK-GGDWASSTAAWCELDCRLGLLTG 304 (433)
T ss_dssp GGGGGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCTT----TTTSSSCSCEEEEEEE-ECSCTTBCCCEEEEEEEEEECTT
T ss_pred CCCCcCcCHHHHHHHHHHHHHHHHHHhhhccccCcc----ccccCCCceEEeeeEE-CCCCCcccCcEEEEEEEEecCCC
Confidence 999999999999999999988763211 0110 1112234688999999 88999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhh
Q 028821 157 YNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~~ 175 (203)
++.+++.++|++.+++.+.
T Consensus 305 ~~~~~~~~~i~~~~~~~~~ 323 (433)
T 3pfo_A 305 DTPQEAMRGIEKCLADAQA 323 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999998764
No 2
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94 E-value=2.4e-26 Score=188.16 Aligned_cols=176 Identities=16% Similarity=0.208 Sum_probs=140.4
Q ss_pred ccccccccCCceeEEEEEEecCCC-CCCCCccHHHHHhccccCCCCCCCEEEeeCCCCCceeeeeeeEEEEEEEeecCCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFH 80 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~-g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~H 80 (203)
++|++.+ ++++|+|+|++|||+ |+ .|++++++.+ .++|+++..||+.+.+.++++|..+++|+++|+++|
T Consensus 118 ~~l~~~~--~~~~v~~~~~~~EE~~g~---~G~~~~~~~~----~~~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~H 188 (356)
T 3ct9_A 118 LQLCRTS--QNYNLIYLASCEEEVSGK---EGIESVLPGL----PPVSFAIVGEPTEMQPAIAEKGLMVLDVTATGKAGH 188 (356)
T ss_dssp HHHTTSC--CSSEEEEEEECCGGGTCT---TTHHHHGGGS----CCCSEEEECCSBTTCCEEEECCCEEEEEEEECBCCB
T ss_pred HHHHhcC--CCCCEEEEEEeCcccCCc---cCHHHHHhhC----CCCCEEEEcCCCCceEEEeeeEEEEEEEEEECCCcc
Confidence 4667665 789999999999998 76 6999999865 257889999998888889999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHH
Q 028821 81 SGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (203)
Q Consensus 81 ss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~ 160 (203)
++.| .|.||+..+++++..++.+..+..++ +..+.+++++.|+ ||.+.|+||++|++.+++|+++.++.+
T Consensus 189 a~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~--------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~~~~~~~~ 258 (356)
T 3ct9_A 189 AARD-EGDNAIYKVLNDIAWFRDYRFEKESP--------LLGPVKMSVTVIN-AGTQHNVVPDKCTFVVDIRSNELYSNE 258 (356)
T ss_dssp TTSS-CCBCTTGGGHHHHHHHHHCCCSCCBT--------TTBSCEEEEEEEE-ECSSTTBCCSEEEEEEEEECCTTCCHH
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhhhcccccc--------cCCCCcEEeeEEe-cCCcCCcCCCceEEEEEEeeCCCCCHH
Confidence 9999 99999999999999997653211111 1124788999999 889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcchhccccCCCCCCCCCCCCccccc
Q 028821 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQ 200 (203)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (203)
++.++|++.++. +++... ....+..+.+++++.+.+
T Consensus 259 ~~~~~i~~~~~~---~~~~~~-~~~~~~~~~~~~~l~~~~ 294 (356)
T 3ct9_A 259 DLFAEIRKHIAC---DAKARS-FRLNSSRIDEKHPFVQKA 294 (356)
T ss_dssp HHHHHHHHHCCS---EEEESC-SCSCCEECCTTSHHHHHH
T ss_pred HHHHHHHHHhhC---eEEEee-ccCCCCCCCCCCHHHHHH
Confidence 999999988765 444211 122233445677666544
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=1.1e-26 Score=195.41 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=130.5
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC----CCceeeee---eeEEEEEEE
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD----KQPCIGTG---GMIPWKLHV 74 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~----~~i~~~~~---g~~~~~i~~ 74 (203)
++|++.+.+++|+|.|+|++|||.+ .|++.+++.|.+++ +|++|.+|++. +.+.++.+ ++.+++|++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~~----~Ga~~~i~~g~~~~--~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v 236 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEGT----RGARAMVAAGVVDD--VDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQF 236 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTTT----CHHHHHHHTTTTTT--CSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEE
T ss_pred HHHHhCcCcCCceEEEEEecccccc----chHHHHHHcCCccc--cceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEE
Confidence 4677777789999999999999954 59999999987764 57999998753 45555444 357999999
Q ss_pred eecCCCc-CCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeec
Q 028821 75 TGKLFHS-GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (203)
Q Consensus 75 ~G~~~Hs-s~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~ 153 (203)
+|+++|+ +.|+.|+||+..+++++..|+.+. +..+ +..+++++.|+ ||.+.|+||++|++.+++|+
T Consensus 237 ~Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~~~~iR~ 303 (445)
T 3io1_A 237 SGVAAHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA-----------GASRVNVGVMQ-AGTGRNVVPSSALLKVETRG 303 (445)
T ss_dssp ECCCSSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT-----------BCEEEEEEEEE-ECSCTTSCCCEEEEEEEEEE
T ss_pred EeecCCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC-----------CCeEEEEEEEe-cCCCCceeCCeEEEEEEEec
Confidence 9999998 799999999999999999987652 2222 24778999999 88999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhh
Q 028821 154 TPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
++.++.+++.++|+++++.++.
T Consensus 304 ~~~~~~~~i~~~i~~~~~~~a~ 325 (445)
T 3io1_A 304 ESEAINQYVFERAQHVVAGAAA 325 (445)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988754
No 4
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.93 E-value=3.4e-26 Score=189.48 Aligned_cols=187 Identities=17% Similarity=0.181 Sum_probs=142.6
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCCC-----ceeeeeeeEEEEEEEee
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGMIPWKLHVTG 76 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~~~~~i~~~G 76 (203)
++|++.+.+++++|+|+|++|||+++. .|++.+++.+...+.++|++++.||+... +..+.+|..+++|+++|
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~~~~--~Ga~~~~~~~~~~~~~~d~~i~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G 193 (393)
T 1vgy_A 116 ERFVAKHPNHQGSIALLITSDEEGDAL--DGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKG 193 (393)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCEEEEEECCCCBSSSTTSEEECEECEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEEEEeccccCCc--CCHHHHHHHHHhcCcCCCEEEEeCCCCcccCCceeEEeeeeEEEEEEEEEc
Confidence 345666667899999999999998631 59999987654455567889988987432 56789999999999999
Q ss_pred cCCCcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCC-ccceeCCeEEEEEEeecCC
Q 028821 77 KLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTP 155 (203)
Q Consensus 77 ~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~-~~nvip~~~~~~~~iR~~~ 155 (203)
+++|++.|+.|.||+..+++++..++....+.. .....+.+++++.|+ +|. +.|+||++|++.+|+|+++
T Consensus 194 ~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~--------~~~~~~~~~~v~~i~-gG~~~~NviP~~a~~~~diR~~~ 264 (393)
T 1vgy_A 194 KQGHIAYPHLAINPVHTFAPALLELTQEVWDEG--------NEYFPPTSFQISNIN-GGTGATNVIPGELNVKFNFRFST 264 (393)
T ss_dssp BCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCC--------CSSCCCCEEEEEEEE-ECCSCTTEECSEEEEEEEEEECT
T ss_pred cCcccCCCccCCCHHHHHHHHHHHhhccccccc--------ccccCCCeEEEeeEc-CCCCCCcccCCeEEEEEEEecCC
Confidence 999999999999999999999999876421110 112234688999999 675 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhhcchhccccCCCCCCCCCCCCccccc
Q 028821 156 FYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQ 200 (203)
Q Consensus 156 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (203)
.++.+++.++|+++++....+++..... ..+++..++.++.+.+
T Consensus 265 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~-~~~p~~~~~~~l~~~~ 308 (393)
T 1vgy_A 265 ESTEAGLKQRVHAILDKHGVQYDLQWSC-SGQPFLTQAGKLTDVA 308 (393)
T ss_dssp TSCHHHHHHHHHHHHHHTTCCEEEEEEE-EECCEECCSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCeEEEEec-CCCcccCCCcHHHHHH
Confidence 9999999999999998765444311111 1233444566665543
No 5
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.93 E-value=1.3e-26 Score=190.43 Aligned_cols=163 Identities=13% Similarity=0.110 Sum_probs=134.9
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCCCceeeeeeeEEEEEEEeecCCCc
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHS 81 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Hs 81 (203)
++|++. ..++++|+|+|++|||+|+. ..|++.+++.+ ++.+++|+++..||+.+.+.++++|..+++|+++|+++|+
T Consensus 116 ~~l~~~-~~~~~~v~~~~~~~EE~g~~-~~G~~~~~~~~-~~~~~~~~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha 192 (369)
T 3tx8_A 116 ATLATS-TELKHDLTLIAYECEEVADH-LNGLGHIRDEH-PEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHS 192 (369)
T ss_dssp HHHTSC-TTCCSEEEEEEECCCSSCTT-SCHHHHHHHHC-GGGGCCSEEEECCCCTTCEEESBCEEEEEEEEEECBCCBT
T ss_pred HHHHhh-cCCCccEEEEEEeccccCcc-cccHHHHHHhc-ccccCCCEEEEeCCCCCceeeecceEEEEEEEEeeecccc
Confidence 456654 46789999999999999851 13999999876 3446789999999999889999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHHH
Q 028821 82 GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTD 161 (203)
Q Consensus 82 s~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~~ 161 (203)
|.|+.|.||+..+++++..++.+..+... ...+....+++++.|+ +|.+.|+||++|++.+|+|+++.++.++
T Consensus 193 ~~p~~g~nAi~~~a~~i~~l~~~~~~~~~------~~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~~~ 265 (369)
T 3tx8_A 193 ARSWLGDNAMHKLSPIISKVAAYKAAEVN------IDGLTYREGLNIVFCE-SGVANNVIPDLAWMNLNFRFAPNRDLNE 265 (369)
T ss_dssp TSGGGSBCTGGGGHHHHHHHHHCCCCEEE------ETTEEEECEEEEEEEE-ECSBTTBCCSEEEEEEEEEECTTSCHHH
T ss_pred CCCCcCcCHHHHHHHHHHHHHhhcccccc------cCCcccCceEEEEEEE-CCCCCccccCcEEEEEEEecCCCCCHHH
Confidence 99999999999999999999865321100 0011113678999999 8899999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 028821 162 VMKRLQEYVDDIN 174 (203)
Q Consensus 162 ~~~~i~~~~~~~~ 174 (203)
+.++|++.+++.+
T Consensus 266 v~~~i~~~~~~~~ 278 (369)
T 3tx8_A 266 AIEHVVETLELDG 278 (369)
T ss_dssp HHHHHHHHTTTTT
T ss_pred HHHHHHHHHHhcc
Confidence 9999999988754
No 6
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.93 E-value=2.5e-26 Score=190.44 Aligned_cols=181 Identities=12% Similarity=0.090 Sum_probs=142.1
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHH-HHHhccccCCCCCCCEEEeeCCCC-CceeeeeeeEEEEEEEeecCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVD-ALVKDGLLNKLKGGPLYWIDTADK-QPCIGTGGMIPWKLHVTGKLF 79 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~-~~~~~~~~~~~~~d~~i~~e~~~~-~i~~~~~g~~~~~i~~~G~~~ 79 (203)
++|++.+..++++|.|+|++|||+++. .|++ .+++.|.+++ +|++|.+||+.+ .+..+.+|..+++|+++|+++
T Consensus 107 ~~L~~~~~~~~g~v~~~f~~~EE~~~~--~Ga~~~~~~~g~~~~--~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~ 182 (394)
T 3ram_A 107 IGLKQVIDQIGGKVVVLGCPAEEGGEN--GSAKASYVKAGVIDQ--IDIALMIHPGNETYKTIDTLAVDVLDVKFYGKSA 182 (394)
T ss_dssp HHHHTTHHHHCSEEEEEECCCTTCCTT--CCHHHHHHHHTGGGG--CSEEECCEEESSBBCCCCBCEEEEEEEEEECBCC
T ss_pred HHHHHhHhhCCceEEEEEECCccCCCC--CchHHHHHHcCCccc--CCEEEEECCccccCCCccccceeEEEEEEEcccc
Confidence 456776667899999999999998721 5999 9999887664 579999998764 466788999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCC
Q 028821 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (203)
Q Consensus 80 Hss-~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~ 158 (203)
|++ .|+.|+||+..+++++..++.+.. ...+ ..+++.+.++ ||.+.|+||++|++.+++|+++.++
T Consensus 183 Ha~~~P~~g~nAi~~a~~~i~~l~~l~~-~~~~-----------~~~~~~~~i~-gG~~~NvIP~~a~~~~~iR~~~~~~ 249 (394)
T 3ram_A 183 HASENADEALNALDAMISYFNGVAQLRQ-HIKK-----------DQRVHGVILD-GGKAANIIPDYTHARFYTRAMTRKE 249 (394)
T ss_dssp BHHHHGGGCBCHHHHHHHHHHHHHHHGG-GSCT-----------TCEEEEEEEE-BCSCTTBCCSEEEEEEEEEESSHHH
T ss_pred ccCCCCcCCCCHHHHHHHHHHHHHHHHh-hCCC-----------CCeeEEEEEE-CCCCCceeCCeEEEEEEEeeCCHHH
Confidence 999 899999999999999999987642 2111 2456777777 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhc--ch-hccccCCCCCCCCCCCCcccc
Q 028821 159 VTDVMKRLQEYVDDINEN--IE-KLDTRGPVSKYVLPDENIRGR 199 (203)
Q Consensus 159 ~~~~~~~i~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~ 199 (203)
.+++.++|+++++.++.. ++ .+.......+.+.+|.++...
T Consensus 250 ~~~i~~~i~~~~~~~a~~~g~~~ei~~~~~~~~~~~~d~~l~~~ 293 (394)
T 3ram_A 250 LDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDL 293 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEEEESSCCBCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCCccCCHHHHHH
Confidence 999999999999887653 22 121102233445566665543
No 7
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.93 E-value=2.7e-25 Score=182.73 Aligned_cols=186 Identities=17% Similarity=0.131 Sum_probs=136.1
Q ss_pred cccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCCC-----ceeeeeeeEEEEEEEeec
Q 028821 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGMIPWKLHVTGK 77 (203)
Q Consensus 3 ~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~~~~~i~~~G~ 77 (203)
.|.+.+.+++++|+|+|++|||.++. .|++.+++....++.++|++++.||+... +.++.+|..+++|+++|+
T Consensus 114 ~l~~~~~~~~~~v~~~~~~~EE~~~~--~G~~~~~~~~~~~~~~~d~~~~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G~ 191 (377)
T 3isz_A 114 EYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQGI 191 (377)
T ss_dssp HHHHHCTTCSSEEEEEEESCSSSCCS--SSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEEEEECEEEEEEEEEECC
T ss_pred HHHHhCCCCCceEEEEEEcccccCcc--ccHHHHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEEcceEEEEEEEEEcc
Confidence 45555667899999999999998752 49999987644445568899998987532 567899999999999999
Q ss_pred CCCcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCC-ccceeCCeEEEEEEeecCCC
Q 028821 78 LFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECTVSGDVRLTPF 156 (203)
Q Consensus 78 ~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~-~~nvip~~~~~~~~iR~~~~ 156 (203)
++|++.|+.|.||+..+++++..|+....+.. ..+..+++++++.++ +|. +.|+||++|++.+|+|+++.
T Consensus 192 ~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~--------~~~~~~~~~~v~~i~-gg~~~~nvip~~~~~~~diR~~~~ 262 (377)
T 3isz_A 192 QGHVAYPHLAENPIHKAALFLQELTTYQWDKG--------NEFFPPTSLQIANIH-AGTGSNNVIPAELYIQFNLRYCTE 262 (377)
T ss_dssp -------CGGGCHHHHHHHHHHHHHHCCCCCC--------CSSSCCCEEEEEEEE-ECCSCSSCCCSEEEEEEEEEECTT
T ss_pred ccccCCCccCcCHHHHHHHHHHHHHhcccccc--------ccccCCceeEEEEEE-CCCCCCcccCCceEEEEEEecCCC
Confidence 99999999999999999999999876421110 112235788999999 666 89999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhcchhccccCCCCCCCCCCCCccccc
Q 028821 157 YNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQ 200 (203)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (203)
++.+++.+++++.+++...+++... ....+++..++.++.+.+
T Consensus 263 ~~~~~i~~~i~~~~~~~g~~~~i~~-~~~~~p~~~~~~~l~~~l 305 (377)
T 3isz_A 263 VTDEIIKQKVAEMLEKHNLKYRIEW-NLSGKPFLTKPGKLLDSI 305 (377)
T ss_dssp SCHHHHHHHHHHHHHHTTCCEEEEE-EECCCCEECCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEE-EecCCCCcCCCCHHHHHH
Confidence 9999999999999988655544111 112233445566666554
No 8
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.92 E-value=1.8e-25 Score=186.63 Aligned_cols=156 Identities=22% Similarity=0.343 Sum_probs=111.3
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEee-----CCCC---CceeeeeeeEEEEEE
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWID-----TADK---QPCIGTGGMIPWKLH 73 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e-----~~~~---~i~~~~~g~~~~~i~ 73 (203)
++|++.+.+++++|+|+|++||| |+ .|++++++.+.+++ +|+++..| +++. .+..+++|..+++|+
T Consensus 130 ~~l~~~~~~~~~~v~~~~~~~EE-g~---~G~~~~~~~g~~~~--~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~ 203 (418)
T 1xmb_A 130 KILHEHRHHLQGTVVLIFQPAEE-GL---SGAKKMREEGALKN--VEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAV 203 (418)
T ss_dssp HHHHHTGGGCSSEEEEEEECCTT-TT---CHHHHHHHTTTTTT--EEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEE
T ss_pred HHHHhccccCCceEEEEEecccc-cc---ccHHHHHHcCCcCC--CCEEEEEecCCCCCCceeEeeeccccccceeEEEE
Confidence 56777777789999999999999 76 69999999876442 57788744 3332 234578999999999
Q ss_pred EeecCCCcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeec
Q 028821 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (203)
Q Consensus 74 ~~G~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~ 153 (203)
++|+++|+|.|+.|.||+..+++++..++.+..+..++ ..+.+++++.|+ ||.+.|+||++|++.+|+|+
T Consensus 204 v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~---------~~~~t~~vg~i~-gG~~~NvIP~~a~~~~diR~ 273 (418)
T 1xmb_A 204 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP---------LDSKVVTVSKVN-GGNAFNVIPDSITIGGTLRA 273 (418)
T ss_dssp EEEC---------CCHHHHHHHHHHHHHHTTCBCCSSG---------GGCEEEEEEEEC---------CCEEEEEEEEEE
T ss_pred EEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCC---------CCCcEEEEEEEE-ecCcCCcCCCeEEEEEEEcc
Confidence 99999999999999999999999999987653221111 123688999998 88999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhh
Q 028821 154 TPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
++ +.+++.++|++.++..+.
T Consensus 274 ~~--~~~~i~~~i~~~~~~~a~ 293 (418)
T 1xmb_A 274 FT--GFTQLQQRVKEVITKQAA 293 (418)
T ss_dssp SS--CHHHHHHHHHHHHHHHHH
T ss_pred Cc--HHHHHHHHHHHHHHHHHH
Confidence 99 899999999999988654
No 9
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.92 E-value=2e-25 Score=183.52 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=123.9
Q ss_pred CceeEEEEEEecCCC-CCCCCccHHHHHhccccCCCCCCCEEEeeCCCCCceeeeeeeEEEEEEEeecCCCcCCCC-CCC
Q 028821 11 LKSTVIAVFIASEEN-SAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPH-KAI 88 (203)
Q Consensus 11 ~~~~v~l~~~~dEE~-g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Hss~p~-~g~ 88 (203)
++++|+|+|++|||. |+ .|++++++.+. ++|++|+.||+.+.++++++|..+++|+++|+++|++.|+ .|.
T Consensus 121 ~~~~v~~~~~~~EE~~g~---~G~~~~~~~~~----~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~ 193 (369)
T 2f7v_A 121 GDGDAAFLFSSDEEANDP---RCIAAFLARGL----PYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPAA 193 (369)
T ss_dssp CCCCEEEEEESCTTSSSC---CHHHHHHTTCC----CCSEEEECCCSTTCBBCCBCCEEEEEEEEECCCC------CTTS
T ss_pred CCCCEEEEEEeCcccCCC---cCHHHHHhcCC----CCCEEEECCCCCCcceeecCceEEEEEEEeeeCcccCCCCcCCC
Confidence 789999999999999 66 69999998753 5789999999888888899999999999999999999999 999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHHHHHHHHHH
Q 028821 89 NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQE 168 (203)
Q Consensus 89 NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~ 168 (203)
||+..+++++..++.+..+ +... ......+ .+++++.|+ +|.+.|+||++|++.+|+|+++.++.+++.++|++
T Consensus 194 nAi~~~~~~i~~l~~~~~~-~~~~---~~~~~~~-~~~~vg~i~-gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~ 267 (369)
T 2f7v_A 194 SALHQAMRWGGKALDHVES-LAHA---RFGGLTG-LRFNIGRVD-GGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG 267 (369)
T ss_dssp CHHHHHHHHHHHHHHHHHH-TTTC---EETTEES-CEEEEEEEE-ECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhh-hccc---ccCcccC-CceEEEEee-cCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHH
Confidence 9999999999999876432 1110 0000111 588999999 88999999999999999999999999999999999
Q ss_pred HHHHhhhcch
Q 028821 169 YVDDINENIE 178 (203)
Q Consensus 169 ~~~~~~~~~~ 178 (203)
.++....+++
T Consensus 268 ~~~~~~~~~~ 277 (369)
T 2f7v_A 268 FADPAAAHFE 277 (369)
T ss_dssp TCSSCCSEEE
T ss_pred HHHHhcCceE
Confidence 8877643443
No 10
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.92 E-value=5.7e-25 Score=182.82 Aligned_cols=158 Identities=20% Similarity=0.302 Sum_probs=117.6
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEe--eCCC--CCce--ee--eeeeEEEEEE
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI--DTAD--KQPC--IG--TGGMIPWKLH 73 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~--e~~~--~~i~--~~--~~g~~~~~i~ 73 (203)
++|++.+..++++|+|+|++|||+ + .|++++++.+.+++ +|+++.. ||+. +.+. .+ .+|..+++|+
T Consensus 136 ~~l~~~~~~~~~~v~~~~~~~EE~-~---~G~~~~~~~g~~~~--~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~ 209 (404)
T 1ysj_A 136 MLLNQRRAELKGTVRFIFQPAEEI-A---AGARKVLEAGVLNG--VSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIV 209 (404)
T ss_dssp HHHHTCGGGCSSEEEEEEESCTTT-T---CHHHHHHHTTTTTT--EEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEE
T ss_pred HHHHhccccCCceEEEEEeccccc-c---hhHHHHHhcCCCcC--CCEEEEEecCCCCCCceEEeccChhhcccceEEEE
Confidence 467777778899999999999999 5 59999998876543 4677765 6653 2232 23 6789999999
Q ss_pred EeecCCCcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeec
Q 028821 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (203)
Q Consensus 74 ~~G~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~ 153 (203)
++|+++|++.|+.|.||+..+++++..++.+..+..++. .+.+++++.|+ ||.+.|+||++|++.+|+|+
T Consensus 210 v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~---------~~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~ 279 (404)
T 1ysj_A 210 IKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSL---------QNAVVSITRVQ-AGTSWNVIPDQAEMEGTVRT 279 (404)
T ss_dssp EECC--------CCCCHHHHHHHHHHHHC--------------------CCEEEEEEEE-ECSCSSSCCSEEEEEEEEEC
T ss_pred EEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCC---------CCcEEEEEEEE-cCCCCceecCceEEEEEEec
Confidence 999999999999999999999999999876532222211 24688999998 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhh
Q 028821 154 TPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
++.++.+++.++|++.+++.+.
T Consensus 280 ~~~~~~~~i~~~i~~~~~~~~~ 301 (404)
T 1ysj_A 280 FQKEARQAVPEHMRRVAEGIAA 301 (404)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987654
No 11
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.91 E-value=2.8e-25 Score=182.38 Aligned_cols=174 Identities=17% Similarity=0.187 Sum_probs=133.7
Q ss_pred ccccccccCC---cee--EEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEE---eeCCCCCceeeeeeeEEEEEE
Q 028821 2 RKLGETKLKL---KST--VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYW---IDTADKQPCIGTGGMIPWKLH 73 (203)
Q Consensus 2 k~L~~~~~~~---~~~--v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~---~e~~~~~i~~~~~g~~~~~i~ 73 (203)
++|++.+.++ +++ |+|+|++|||.++. .|++++++.+ ++|+++. .+|++ ++++++|..+++|+
T Consensus 113 ~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~--~G~~~~~~~~-----~~d~~i~~d~~~p~~--i~~~~~G~~~~~i~ 183 (364)
T 2rb7_A 113 RDRLNALKAAGRSQKDMALGLLITGDEEIGGM--NGAAKALPLI-----RADYVVALDGGNPQQ--VITKEKGIIDIKLT 183 (364)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEEESCGGGTST--TTHHHHGGGC-----EEEEEEECSSSBTTE--EEEEECEEEEEEEE
T ss_pred HHHHHhCCCCcccCCCccEEEEEEeccccCch--hhHHHHHhcC-----CCCEEEEccCCcccc--eEEEeeeEEEEEEE
Confidence 4566665556 678 99999999997431 5999998764 4577888 44444 88899999999999
Q ss_pred EeecCCCcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeec
Q 028821 74 VTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRL 153 (203)
Q Consensus 74 ~~G~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~ 153 (203)
++|+++|++.|+.|.||+..+++++..++.+.. ++.. ..+..+++++.|+ ||.+.|+||++|++.+|+|+
T Consensus 184 v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~------~~~~~~~~vg~i~-gG~~~NviP~~a~~~~~iR~ 253 (364)
T 2rb7_A 184 CTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENE------DHWHRTVNLGRIR-AGESTNKVPDVAEGWFNIRV 253 (364)
T ss_dssp EECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCT------TCCSCEEEEEEEE-ECSCTTEECSEEEEEEEEEE
T ss_pred EEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhh------cCCCceEEEEEEe-cCCcCcccCcceEEEEEEee
Confidence 999999999999999999999999999876421 1110 0024788999999 89999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhcchhccccCCCCCCCCCCCCccccc
Q 028821 154 TPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQ 200 (203)
Q Consensus 154 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (203)
++.++.+++.++|++.++. +++ .. ...+.+..+++++.+.+
T Consensus 254 ~~~~~~~~i~~~i~~~~~~---~v~-~~--~~~~~~~~~~~~l~~~~ 294 (364)
T 2rb7_A 254 TEHDDPGALIDKIRKTVSG---TVS-IV--RTVPVFLAADSPYTERL 294 (364)
T ss_dssp CTTSCHHHHHHHHHHHCSS---EEE-EE--EEECCEECCCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhhh---hEE-ec--cCCccccCCCCHHHHHH
Confidence 9999999999999988765 444 11 12233445566665543
No 12
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.91 E-value=2.1e-24 Score=178.76 Aligned_cols=151 Identities=22% Similarity=0.271 Sum_probs=129.2
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC---CCceeeeeeeEEEEEEEeecC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD---KQPCIGTGGMIPWKLHVTGKL 78 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~---~~i~~~~~g~~~~~i~~~G~~ 78 (203)
++|++.+.+++++|+|+|+++||.|+ .|++.+++.+. .++|++|+.||+. +.++++++|..+++|+++|++
T Consensus 132 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~G~~~~~~~~~---~~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~~ 205 (393)
T 1cg2_A 132 KLLKEYGVRDYGTITVLFNTDEEKGS---FGSRDLIQEEA---KLADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKA 205 (393)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTTHHHHHHHH---HHCSEEEECCCEETTSCEEESEECEEEEEEEEEECBC
T ss_pred HHHHhcCCCCCCCEEEEEEcccccCC---ccHHHHHHHHh---hcCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEeee
Confidence 56777777788899999999999987 69999997643 2468999999873 457789999999999999999
Q ss_pred CCcC-CCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCC
Q 028821 79 FHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFY 157 (203)
Q Consensus 79 ~Hss-~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~ 157 (203)
+|++ .|+.|.||+..+++++..++.+. ++. ...+++++.|+ ||.+.|+||++|++.+++|+++.+
T Consensus 206 ~Hag~~p~~g~nAi~~~~~~i~~l~~~~----~~~---------~~~~~~v~~i~-gG~~~NvIP~~a~~~~~iR~~~~~ 271 (393)
T 1cg2_A 206 SHAGAAPELGVNALVEASDLVLRTMNID----DKA---------KNLRFNWTIAK-AGNVSNIIPASATLNADVRYARNE 271 (393)
T ss_dssp EETTSCGGGSBCHHHHHHHHHHHHGGGC----BTT---------TTEEEEEEEEE-ECSSTTEECSEEEEEEEEEESSHH
T ss_pred cccCCCcccCcCHHHHHHHHHHHHHhhh----Ccc---------cCceEEEEEEe-CCCCCCEECcccEEEEEEeeCChh
Confidence 9996 79999999999999999887542 111 13788999999 889999999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 028821 158 NVTDVMKRLQEYVDD 172 (203)
Q Consensus 158 ~~~~~~~~i~~~~~~ 172 (203)
+.+++.++|++.++.
T Consensus 272 ~~~~i~~~i~~~~~~ 286 (393)
T 1cg2_A 272 DFDAAMKTLEERAQQ 286 (393)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHhc
Confidence 999999999988865
No 13
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.90 E-value=4.4e-24 Score=176.99 Aligned_cols=151 Identities=15% Similarity=0.256 Sum_probs=127.3
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC--CCceeeeeeeEEEEEEEeecCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~--~~i~~~~~g~~~~~i~~~G~~~ 79 (203)
++|++.+ .++++|.|+|+++||.|+ .|++.++.. ++++|+++..+++. +.+.++.+|..+++|+++|+++
T Consensus 142 ~~l~~~~-~~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~ 213 (396)
T 3rza_A 142 QVIKEQQ-IPHGQIQFVITVGEESGL---IGAKELNSE----LLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTA 213 (396)
T ss_dssp HHHHHHT-CCCCCEEEEEESCGGGTS---HHHHHCCGG----GCCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcC-CCCCCEEEEEEccccccc---HhHhhhchh----hcccceEEEEecCCCcceEEEcCCceEEEEEEEEeEec
Confidence 4566666 367999999999999987 699988654 34567888888753 5788899999999999999999
Q ss_pred CcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCH
Q 028821 80 HSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (203)
Q Consensus 80 Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~ 159 (203)
|+|.|+.|+||+..+++++..|+.. .+++ ..+++++.|+ +|.+.|+||++|++.+++|+++.++.
T Consensus 214 Ha~~p~~g~nai~~~~~~i~~l~~~---~~~~-----------~~~~~vg~i~-gG~~~NvIP~~a~~~~diR~~~~~~~ 278 (396)
T 3rza_A 214 HASTPKEGVSAINIAAKAISRMKLG---QVDE-----------ITTANIGKFH-GGSATNIVADEVILEAEARSHDPERI 278 (396)
T ss_dssp BTTSGGGSBCHHHHHHHHHHHSCCE---EEET-----------TEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHHH
T ss_pred CCCCccccccHHHHHHHHHHhcccC---CCCC-----------CceeeeeEEe-cCCCCcccCceEEEEEEEEeCCHHHH
Confidence 9999999999999999999877531 1122 3678999998 88999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 028821 160 TDVMKRLQEYVDDINE 175 (203)
Q Consensus 160 ~~~~~~i~~~~~~~~~ 175 (203)
+++.++|++.++..+.
T Consensus 279 ~~~~~~i~~~~~~~a~ 294 (396)
T 3rza_A 279 KTQVKHMTDVFETTAS 294 (396)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887654
No 14
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.89 E-value=6e-24 Score=174.80 Aligned_cols=151 Identities=17% Similarity=0.255 Sum_probs=126.8
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC--CCceeeeeeeEEEEEEEeecCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD--KQPCIGTGGMIPWKLHVTGKLF 79 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~--~~i~~~~~g~~~~~i~~~G~~~ 79 (203)
++|++.+. ++++|.|+|+++||.|+ .|++.+... ++++|+++..+++. +.+.++.+|..+++|+++|+++
T Consensus 121 ~~l~~~~~-~~~~v~~~~~~~EE~g~---~Ga~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~ 192 (373)
T 3gb0_A 121 RVLKEKNI-PHGTIEFIITVGEESGL---VGAKALDRE----RITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTA 192 (373)
T ss_dssp HHHHHTTC-CCCCEEEEEESCGGGTS---HHHHHSCGG----GCCCSEEEEEEECSCTTEEEEEECEEEEEEEEEECBCC
T ss_pred HHHHhcCC-CCCCEEEEEEeccccCc---hhhhhhCHH----hcCCCEEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEec
Confidence 45666664 78999999999999987 699988543 35678888888764 4677889999999999999999
Q ss_pred CcC-CCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCC
Q 028821 80 HSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYN 158 (203)
Q Consensus 80 Hss-~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~ 158 (203)
|++ .|+.|+||+..+++++..|+.. .+++ ..+++++.|+ +|.+.|+||++|++.+|+|+++.++
T Consensus 193 Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~~-----------~~~~~vg~i~-gG~~~Nvip~~~~~~~d~R~~~~~~ 257 (373)
T 3gb0_A 193 HAGVAPEKGVSAITIAAKAIAKMPLG---RIDS-----------ETTANIGRFE-GGTQTNIVCDHVQIFAEARSLINEK 257 (373)
T ss_dssp BTTTCGGGSBCHHHHHHHHHTTSCCE---EEET-----------TEEEEEEEEE-ECSCTTBCCCEEEEEEEEEESSHHH
T ss_pred CCCCChhhCcCHHHHHHHHHHhcccc---cCCC-----------ccccceeEEe-cCcccccccceEEEEEEEecCCHHH
Confidence 999 7999999999999999876431 1122 3678999998 8899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 028821 159 VTDVMKRLQEYVDDINE 175 (203)
Q Consensus 159 ~~~~~~~i~~~~~~~~~ 175 (203)
.+++.++|++.++..+.
T Consensus 258 ~~~~~~~i~~~~~~~~~ 274 (373)
T 3gb0_A 258 MEAQVAKMKEAFETTAK 274 (373)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887654
No 15
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.87 E-value=1.5e-22 Score=168.48 Aligned_cols=161 Identities=20% Similarity=0.223 Sum_probs=124.3
Q ss_pred ccccccccCCceeEEEEEEecCCCCCC--CCccHHHHHh------------ccc---------------c-----CCCCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVK------------DGL---------------L-----NKLKG 47 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~--~~~G~~~~~~------------~~~---------------~-----~~~~~ 47 (203)
+.|++.+.+++++|.|+|+++||.+.. ...|++.++. .|. + +..++
T Consensus 103 ~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~ 182 (408)
T 3n5f_A 103 QTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTV 182 (408)
T ss_dssp HHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGGSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTE
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHhhccCCCCCCHHHHHHHhCCChhhhhhcccCccCc
Confidence 567778878999999999999997310 0159999872 221 1 11134
Q ss_pred CCEEEeeCCCC----------CceeeeeeeEEEEEEEeecCCCc-CCC-CCCCCHHHHHHHHHHHHHHHHhcCCCCCCCc
Q 028821 48 GPLYWIDTADK----------QPCIGTGGMIPWKLHVTGKLFHS-GLP-HKAINPLELAMEALKVIQTRFYKDFPPHPKE 115 (203)
Q Consensus 48 d~~i~~e~~~~----------~i~~~~~g~~~~~i~~~G~~~Hs-s~p-~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~ 115 (203)
|+++..|...+ .+..+++|..+++|+++|+++|+ +.| +.|.||+..+++++..|+.+. +.++
T Consensus 183 ~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~~----- 256 (408)
T 3n5f_A 183 KAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRTG----- 256 (408)
T ss_dssp EEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS-----
T ss_pred cEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH-HhcC-----
Confidence 55666664322 23457999999999999999999 689 589999999999999998764 2222
Q ss_pred cccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhh
Q 028821 116 QVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 116 ~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
+.+++++.|+.|+.+.|+||++|++.+|+|+++.++.+++.++|++.++.++.
T Consensus 257 -------~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~ 309 (408)
T 3n5f_A 257 -------TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAK 309 (408)
T ss_dssp -------SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 37789999993348999999999999999999999999999999999887653
No 16
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.87 E-value=4.7e-22 Score=168.87 Aligned_cols=166 Identities=17% Similarity=0.179 Sum_probs=126.3
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccc---cCCCCCCCEEEeeCCC-----CCceeeeeeeEEEEEE
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGL---LNKLKGGPLYWIDTAD-----KQPCIGTGGMIPWKLH 73 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~---~~~~~~d~~i~~e~~~-----~~i~~~~~g~~~~~i~ 73 (203)
++|++.+.+++++|+|+|+++||+|+ .|++.+++.+. ++ ++|++|+.|++. ..+.++.+|..+++|+
T Consensus 156 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~ 230 (485)
T 3dlj_A 156 SAFRALEQDLPVNIKFIIEGMEEAGS---VALEELVEKEKDRFFS--GVDYIVISDNLWISQRKPAITYGTRGNSYFMVE 230 (485)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTT---TTHHHHHHHHTTTTST--TCCEEEECCCBCCC--CCEEEEEECEEEEEEEE
T ss_pred HHHHHhCCCCCccEEEEEEcccccCC---ccHHHHHHhhhhhccc--CCCEEEEcCCCccCCCCeeEEEeccceEEEEEE
Confidence 56778888899999999999999987 69999998753 22 468999999753 2456799999999999
Q ss_pred EeecCC--CcCCCCCCCCHHHHHHHHHHHHHHHHhcC-----------CCCCCCc-----cccCCC--------------
Q 028821 74 VTGKLF--HSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPKE-----QVYGFE-------------- 121 (203)
Q Consensus 74 ~~G~~~--Hss~p~~g~NAi~~~~~~l~~l~~~~~~~-----------~~~~~~~-----~~~~~~-------------- 121 (203)
++|+++ |++. .|.||+..++.++..|..+.... .+|.... ....+.
T Consensus 231 v~G~~~~~H~~~--~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 308 (485)
T 3dlj_A 231 VKCRDQDFHSGT--FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFL 308 (485)
T ss_dssp EESCSSCEETTT--STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCS
T ss_pred EEECCCCCcCCC--CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCccc
Confidence 999999 9997 36677777666666665432110 1110000 000000
Q ss_pred ------------CCceEeeEEEecCC----CccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhh
Q 028821 122 ------------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 122 ------------~~~~~~~~~i~~gg----~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
...+++++.|+ || ++.|+||++|++.+++|+.+.++.+.+.++|++.++..+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~v~~i~-gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~ 377 (485)
T 3dlj_A 309 FDTKEEILMHLWRYPSLSIHGIE-GAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFS 377 (485)
T ss_dssp CSSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHhcCCceEEEEEe-cCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhcc
Confidence 14678999998 77 8899999999999999999999999999999999998754
No 17
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.87 E-value=1.4e-22 Score=171.87 Aligned_cols=193 Identities=17% Similarity=0.193 Sum_probs=137.2
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCC-CCCEEEeeCCCC-----CceeeeeeeEEEEEEEe
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLK-GGPLYWIDTADK-----QPCIGTGGMIPWKLHVT 75 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~-~d~~i~~e~~~~-----~i~~~~~g~~~~~i~~~ 75 (203)
++|++.+..++++|+|+|++|||+|+ .|++.+++.+. +.++ +|++|+.+++.. .+.++++|..+++|+++
T Consensus 160 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~ 235 (481)
T 2pok_A 160 RKYMQHHDDLPVNISFIMEGAEESAS---TDLDKYLEKHA-DKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVK 235 (481)
T ss_dssp HHHHHTCSSCSSEEEEEEESCGGGTT---TTHHHHHHHHH-HHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEecccccCc---hhHHHHHHHhH-hhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEe
Confidence 45666645788999999999999987 69999887641 1134 688888887532 35668999999999999
Q ss_pred ecC--CCcCCCCCCCCHHHHHHHHHHHHHHHH-----------------------hcC-C-C------------CCCCcc
Q 028821 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRF-----------------------YKD-F-P------------PHPKEQ 116 (203)
Q Consensus 76 G~~--~Hss~p~~g~NAi~~~~~~l~~l~~~~-----------------------~~~-~-~------------~~~~~~ 116 (203)
|++ +||+.|+.|.||+..+++++..|+... .+. + + +.....
T Consensus 236 G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (481)
T 2pok_A 236 SADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEE 315 (481)
T ss_dssp CSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCS
T ss_pred cCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCccccccccc
Confidence 999 899999999999999999998875421 000 0 0 000000
Q ss_pred ccCC----CCCceEeeEEEecCCC----ccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhh-cch-hccccCCC
Q 028821 117 VYGF----ETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE-NIE-KLDTRGPV 186 (203)
Q Consensus 117 ~~~~----~~~~~~~~~~i~~gg~----~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~-~~~-~~~~~~~~ 186 (203)
+... ....+++++.|+ ||. +.|+||++|++.+++|++++++.+++.++|++.++..+. .++ .+. ...+
T Consensus 316 g~~~~~~~~~~~t~~vg~i~-gG~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~v~~~-~~~p 393 (481)
T 2pok_A 316 RMAFLKRFFFDPALNIEGIQ-SGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYT-LGEM 393 (481)
T ss_dssp HHHHHHHHHHSCEEEEEEEE-EECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTCTTEEEEEE-EEEC
T ss_pred chhHHHHHhhcCeEeEEeee-cCCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCCCceEEEEc-cCCC
Confidence 0000 023688999998 654 689999999999999999999999999999999988642 222 111 1222
Q ss_pred CCCCCCCCCccccc
Q 028821 187 SKYVLPDENIRGRQ 200 (203)
Q Consensus 187 ~~~~~~~~~~~~~~ 200 (203)
+..+.+++++.+.+
T Consensus 394 ~~~~~~d~~l~~~~ 407 (481)
T 2pok_A 394 SYRSDMSAPAILNV 407 (481)
T ss_dssp CBCCCSCSHHHHHH
T ss_pred cccCCCCCHHHHHH
Confidence 33445677666544
No 18
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.87 E-value=2.5e-22 Score=170.06 Aligned_cols=167 Identities=14% Similarity=0.136 Sum_probs=125.3
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCC-CCCCEEEeeCCC-----CCceeeeeeeEEEE--EE
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKL-KGGPLYWIDTAD-----KQPCIGTGGMIPWK--LH 73 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~-~~d~~i~~e~~~-----~~i~~~~~g~~~~~--i~ 73 (203)
++|++.+..+. +|+|+|++|||+|+ .|++.+++.+. +.+ ++|++|+.|++. ..+.++.+|..+++ |+
T Consensus 143 ~~l~~~~~~~~-~v~~~~~~~EE~g~---~g~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~ 217 (472)
T 3pfe_A 143 RALEQQGLPYP-RCILIIEACEESGS---YDLPFYIELLK-ERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVE 217 (472)
T ss_dssp HHHHHTTCCCE-EEEEEEESCGGGTS---TTHHHHHHHHH-HHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHcCCCCC-cEEEEEEeCCCCCC---hhHHHHHHHhH-hhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEE
Confidence 56777776666 99999999999987 69999998751 112 578999999753 23567899998877 45
Q ss_pred EeecCCCcCCCCCC-CCHHHHHHHHHHHHHHHHh---------cCCCC--------------------CC-CccccCCCC
Q 028821 74 VTGKLFHSGLPHKA-INPLELAMEALKVIQTRFY---------KDFPP--------------------HP-KEQVYGFET 122 (203)
Q Consensus 74 ~~G~~~Hss~p~~g-~NAi~~~~~~l~~l~~~~~---------~~~~~--------------------~~-~~~~~~~~~ 122 (203)
++|+++|+|.|+.+ .||+..+++++..|+.... +.+++ .. ......+..
T Consensus 218 ~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (472)
T 3pfe_A 218 LINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQ 297 (472)
T ss_dssp SCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCS
T ss_pred eCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCcccccc
Confidence 58999999998754 5999999999999875410 00000 00 000000100
Q ss_pred -----------CceEeeEEEecCC----CccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhh
Q 028821 123 -----------PSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (203)
Q Consensus 123 -----------~~~~~~~~i~~gg----~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~ 174 (203)
.++++++.|+ || ++.|+||++|++.+|+|+.+.++.+.+.++|++.++..+
T Consensus 298 ~~~~~~~~~~~~~tl~i~~i~-gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~ 363 (472)
T 3pfe_A 298 DKQQLILNRTWRPALTVTGAD-GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP 363 (472)
T ss_dssp CHHHHHHHHHTSCEEEEEEEE-SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC
T ss_pred chHHHHHHhhcCCcEEEeeee-cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC
Confidence 3688999999 54 789999999999999999999999999999999998754
No 19
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.86 E-value=3.7e-22 Score=169.79 Aligned_cols=189 Identities=11% Similarity=0.043 Sum_probs=125.3
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhcccc---------------------------------------
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLL--------------------------------------- 42 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~--------------------------------------- 42 (203)
++|++.+.+++++|+|+|++|||+|+ .|+++++++...
T Consensus 151 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~g~~~~~~~~~~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~ 227 (492)
T 3khx_A 151 KILEDMNVDWKKRIHMIIGTDEESDW---KCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDY 227 (492)
T ss_dssp HHHHHTTCCCSSEEEEEEECCTTCCC---CTTSHHHHHSCCCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSE
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCC---cCHHHHHHhCcCCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccc
Confidence 56778888889999999999999998 699999975321
Q ss_pred ----------CCCCCCCE--EEeeCCCC-Cc---------eeeeeeeE-----EEEEEEeecCCCcCCCCCCCCHHHHHH
Q 028821 43 ----------NKLKGGPL--YWIDTADK-QP---------CIGTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAM 95 (203)
Q Consensus 43 ----------~~~~~d~~--i~~e~~~~-~i---------~~~~~g~~-----~~~i~~~G~~~Hss~p~~g~NAi~~~~ 95 (203)
.+..||.+ ++.+|+.. .+ ..+++|.. +++|+++|+++|+|.|+.|+|||..++
T Consensus 228 ~~~~~~~g~~~n~vpd~~~aiv~ept~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a 307 (492)
T 3khx_A 228 ELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLL 307 (492)
T ss_dssp EEEEEEECSCTTSCCCEEEEEEEECSCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHH
T ss_pred eeEEecccccCCcCCchHheEeecccchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHH
Confidence 01224444 55565542 11 23568888 999999999999999999999999999
Q ss_pred HHHHHHH------HHH---hcCCC--CCCC-c---cccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHH
Q 028821 96 EALKVIQ------TRF---YKDFP--PHPK-E---QVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVT 160 (203)
Q Consensus 96 ~~l~~l~------~~~---~~~~~--~~~~-~---~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~ 160 (203)
+++..+. .+. .+.+. .... . ......+..++|++.|+ ++. |++|++.+|+|+++..+.+
T Consensus 308 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~-~g~-----P~~a~~~idiR~~~~~~~~ 381 (492)
T 3khx_A 308 KFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVIT-YDN-----ENAGLFGINLRYPEGFEFE 381 (492)
T ss_dssp HHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEE-EET-----TTCCEEEEEEEECTTCCHH
T ss_pred HHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEE-Eec-----CCEEEEEEEeeCCCCCCHH
Confidence 9998765 111 01111 0000 0 00112345788999887 443 9999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcchhccccCCCCCCCCCCCCcccccc
Q 028821 161 DVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQL 201 (203)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (203)
++.++|+++++....+++.. ....+.++.++++|++++.
T Consensus 382 ~v~~~i~~~~~~~g~~~~i~--~~~~p~~~~~d~~lv~~l~ 420 (492)
T 3khx_A 382 KAMDRFANEIQQYGFEVKLG--KVQPPHYVDKNDPFVQKLV 420 (492)
T ss_dssp HHHHHHHHHHGGGTEEEEEE--EEECCBCCGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEe--ccCCceecCCCcHHHHHHH
Confidence 99999999987654444422 2233445667788876653
No 20
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.86 E-value=3e-22 Score=167.22 Aligned_cols=162 Identities=17% Similarity=0.121 Sum_probs=123.4
Q ss_pred ccccccccCCceeEEEEEEecCCCCCC--CCccHHHHHh----ccccC----------------CC-----------CCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAI--TGVGVDALVK----DGLLN----------------KL-----------KGG 48 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~--~~~G~~~~~~----~~~~~----------------~~-----------~~d 48 (203)
++|++.+.+++++|+|+|++|||++.. ...|++.+.. .+.++ ++ +.|
T Consensus 107 ~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~ 186 (423)
T 1z2l_A 107 DWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIK 186 (423)
T ss_dssp HHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEE
T ss_pred HHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCce
Confidence 567777878999999999999998420 0148888875 22111 11 123
Q ss_pred CEEEeeCCC----------CCceeeeeeeEEEEEEEeecCCCcC-CCC-CCCCHHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 028821 49 PLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQ 116 (203)
Q Consensus 49 ~~i~~e~~~----------~~i~~~~~g~~~~~i~~~G~~~Hss-~p~-~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~ 116 (203)
+++..|... ..++.+.+|..+++|+++|+++|++ .|+ .|.||+..+++++..++.+..+ .++
T Consensus 187 ~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~----- 260 (423)
T 1z2l_A 187 AFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD----- 260 (423)
T ss_dssp EEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT-----
T ss_pred EEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC-----
Confidence 455444322 1244678999999999999999999 795 8999999999999999876432 222
Q ss_pred ccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhh
Q 028821 117 VYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 117 ~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
..+++++.|+.|+.+.|+||++|++.+|+|+++.++.+++.++|++.++..+.
T Consensus 261 ------~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~ 313 (423)
T 1z2l_A 261 ------PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICD 313 (423)
T ss_dssp ------TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36789999983348999999999999999999999999999999999887643
No 21
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.86 E-value=1.2e-21 Score=165.90 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=127.5
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCC-CCCCCEEEeeCC-----CCCceeeeeeeEEEEEEEe
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNK-LKGGPLYWIDTA-----DKQPCIGTGGMIPWKLHVT 75 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~-~~~d~~i~~e~~-----~~~i~~~~~g~~~~~i~~~ 75 (203)
++|++.+.+++++|+|+|++|||.|+ .|++.+++.+...- .++|++++.|+. .+.++++++|..+++|+++
T Consensus 149 ~~l~~~~~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~ 225 (479)
T 2zog_A 149 EAYQKTGQEIPVNLRFCLEGMEESGS---EGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVE 225 (479)
T ss_dssp HHHHHTTCCCSSEEEEEEESCGGGTC---TTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEE
T ss_pred HHHHHhCCCCCCcEEEEEecccccCC---ccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEE
Confidence 56777777889999999999999987 69999998642100 146889998874 2346789999999999999
Q ss_pred ecC--CCcCCCCCCCCHHHHHHHHHHHHHHHHhcC-----------CCCCCC-----ccccCCC----------------
Q 028821 76 GKL--FHSGLPHKAINPLELAMEALKVIQTRFYKD-----------FPPHPK-----EQVYGFE---------------- 121 (203)
Q Consensus 76 G~~--~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~-----------~~~~~~-----~~~~~~~---------------- 121 (203)
|++ +|||.+ |.||+..+++++..++.+.... ..+... .....+.
T Consensus 226 G~~~~~Hs~~~--g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 303 (479)
T 2zog_A 226 CSDKDLHSGVY--GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHS 303 (479)
T ss_dssp CCSSCEEHHHH--TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCS
T ss_pred eCCCCCccCCC--CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCcccccc
Confidence 999 999985 8899999999998876542110 000000 0000000
Q ss_pred ----------CCceEeeEEEecCC----CccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhh
Q 028821 122 ----------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 174 (203)
Q Consensus 122 ----------~~~~~~~~~i~~gg----~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~ 174 (203)
...+++++.|+ || .+.|+||++|++.+++|++|+++.+++.++|++.++.++
T Consensus 304 ~~~~~~~~~~~~~~~~v~~i~-gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~ 369 (479)
T 2zog_A 304 CKKDILMHRWRYPSLSLHGIE-GAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKF 369 (479)
T ss_dssp SHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHhhcCCCeEEeeee-cCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 13678999998 66 789999999999999999999999999999999998875
No 22
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.85 E-value=8.7e-22 Score=166.77 Aligned_cols=156 Identities=15% Similarity=0.116 Sum_probs=122.8
Q ss_pred ccccccccCCceeEEEEEEecCCC-----CCCCCccHHHHHhccc-------c----------------CCC--------
Q 028821 2 RKLGETKLKLKSTVIAVFIASEEN-----SAITGVGVDALVKDGL-------L----------------NKL-------- 45 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~-----g~~~~~G~~~~~~~~~-------~----------------~~~-------- 45 (203)
++|++.+.+++++|+|+|++|||+ |+ .|++.+..... . .++
T Consensus 137 ~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~---~Gs~~l~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~ 213 (474)
T 2v8h_A 137 RTFKDNNYVPNYDVCVVVWFNAEGARFARSC---TGSSVWSHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASY 213 (474)
T ss_dssp HHHHHHTCCCSSCEEEEECTTCSCSSSSCTT---HHHHHHTTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCT
T ss_pred HHHHHcCCCCCCCEEEEEECCccCCCCCCCc---ccHHHHHhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccc
Confidence 567778888899999999999998 43 58998864100 0 011
Q ss_pred ---CCCCEEEeeCCC----------CCceeeeeeeEEEEEEEeecCCCcC-CCC-CCCCHHHHHHHHHHHHHHHHhcCCC
Q 028821 46 ---KGGPLYWIDTAD----------KQPCIGTGGMIPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFP 110 (203)
Q Consensus 46 ---~~d~~i~~e~~~----------~~i~~~~~g~~~~~i~~~G~~~Hss-~p~-~g~NAi~~~~~~l~~l~~~~~~~~~ 110 (203)
.+|+++..|... ..++.+.+|..+++|+++|+++|++ .|+ .|.||+..+++++..++.+..+.
T Consensus 214 ~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-- 291 (474)
T 2v8h_A 214 KENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-- 291 (474)
T ss_dssp TTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT--
T ss_pred cccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc--
Confidence 234555554321 1244578999999999999999999 597 89999999999999998764321
Q ss_pred CCCCccccCCCCCceEeeEEEecCC-CccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhh
Q 028821 111 PHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~i~~gg-~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
..+++++.|+ +| .+.|+||++|++.+++|+++.++.+++.++|++.++..+.
T Consensus 292 ------------~~t~~vg~i~-gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~ 344 (474)
T 2v8h_A 292 ------------NGLFTCGIID-AKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIK 344 (474)
T ss_dssp ------------TCEEECCCEE-EESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------CCEEEEEEEE-ecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHh
Confidence 2678999999 65 8999999999999999999999999999999999988643
No 23
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.85 E-value=3e-22 Score=167.91 Aligned_cols=149 Identities=15% Similarity=0.050 Sum_probs=120.0
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC-CCceeeeeeeEEEEEEEeecCCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGMIPWKLHVTGKLFH 80 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~-~~i~~~~~g~~~~~i~~~G~~~H 80 (203)
++|++++..++++|.|+|++|||+|. |++.+... .+++|++|+.|++. +.+.++.+|..+++|+++|+++|
T Consensus 179 ~~L~~~~~~~~~~i~~if~~~EE~g~----Ga~~~~~~----~~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~~H 250 (434)
T 3ife_A 179 NYLIHNPQIKHGKIRVAFTPDEEIGR----GPAHFDVE----AFGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTH 250 (434)
T ss_dssp HHHHTCTTSCBCCEEEEEESCGGGTC----TGGGCCHH----HHCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCCCCCCCCEEEEEECCcccCh----HHHHhhhh----hcCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEecC
Confidence 56778877899999999999999984 88876432 23578999999874 56888999999999999999999
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCH
Q 028821 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (203)
Q Consensus 81 ss-~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~ 159 (203)
|+ .|+.|+||+..+++++..|+... .+. ..+.+++.++ + +..|+||++|++.+++|+++.++.
T Consensus 251 ag~~P~~g~nAi~~aa~~i~~l~~~~---~~~-----------~~~~~~g~i~-~-g~~n~iP~~a~~~~diR~~~~~~~ 314 (434)
T 3ife_A 251 PGTAKNKMRNATKLAMEFNGHLPVEE---APE-----------YTEGYEGFYH-L-LSLNGDVEQSKAYYIIRDFDRKNF 314 (434)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTC---SGG-----------GCCTTCCEEE-E-EEEEECSSEEEEEEEEEESSHHHH
T ss_pred CCCCcccchhHHHHHHHHHHhccccc---CCC-----------cceeeeEEEE-e-eeEeEecCeEEEEEEEecCCHHHH
Confidence 87 79999999999999998876431 111 1222344454 2 347899999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 028821 160 TDVMKRLQEYVDDIN 174 (203)
Q Consensus 160 ~~~~~~i~~~~~~~~ 174 (203)
+++.++|++++++++
T Consensus 315 ~~i~~~i~~~~~~~~ 329 (434)
T 3ife_A 315 EARKNTIENIVKQMQ 329 (434)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 24
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.81 E-value=4.8e-20 Score=153.64 Aligned_cols=149 Identities=11% Similarity=0.055 Sum_probs=119.4
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCC-CCCceeeeeeeEEEEEEEeecCCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA-DKQPCIGTGGMIPWKLHVTGKLFH 80 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~-~~~i~~~~~g~~~~~i~~~G~~~H 80 (203)
++|++.+ .++++|+|+|++|||+|. |++.+++.+ +++|+++..++. .+.+.++.+|..+++|+++|+++|
T Consensus 153 ~~l~~~~-~~~~~v~~~~~~~EE~g~----Ga~~~~~~~----~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~H 223 (417)
T 1fno_A 153 AVLKGNP-IPHGDIKVAFTPDEEVGK----GAKHFDVEA----FGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVH 223 (417)
T ss_dssp HHHHSSS-CCCCCEEEEEESCGGGTC----TTTTCCHHH----HCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCC
T ss_pred HHHHhCC-CCCCcEEEEEEeccccCC----Chhhhchhh----cCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccC
Confidence 5677777 788999999999999873 887776433 357888887764 356778899999999999999999
Q ss_pred cC-CCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCH
Q 028821 81 SG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNV 159 (203)
Q Consensus 81 ss-~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~ 159 (203)
++ .|+.|.||+..+++++..|+........ .....+++++.++ +| |+.|++.+|+|+++.++.
T Consensus 224 s~~~p~~g~nAi~~~a~~i~~l~~~~~~~~~---------~~~~~~~~v~~i~-gG------p~~a~~~~d~R~~~~~~~ 287 (417)
T 1fno_A 224 PGTAKGVMVNALSLAARIHAEVPADEAPETT---------EGYEGFYHLASMK-GT------VDRAEMHYIIRDFDRKQF 287 (417)
T ss_dssp GGGCTTTCBCHHHHHHHHHHTSCTTSSGGGC---------CTTCCEEEEEEEE-EC------SSEEEEEEEEEESSHHHH
T ss_pred CCCCccccCCHHHHHHHHHHhhhccCCcccc---------cccccEEEEEEEe-ec------cCeEEEEEEEeCCCHHHH
Confidence 99 6999999999999999887654211100 1123578889888 55 999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 028821 160 TDVMKRLQEYVDDINE 175 (203)
Q Consensus 160 ~~~~~~i~~~~~~~~~ 175 (203)
+++.++|+++++.++.
T Consensus 288 ~~~~~~i~~~~~~~~~ 303 (417)
T 1fno_A 288 EARKRKMMEIAKKVGK 303 (417)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988643
No 25
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.80 E-value=1.7e-19 Score=153.21 Aligned_cols=118 Identities=21% Similarity=0.239 Sum_probs=96.9
Q ss_pred CCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC-CCceeeeeee-----------------EEEE
Q 028821 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPCIGTGGM-----------------IPWK 71 (203)
Q Consensus 10 ~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~-~~i~~~~~g~-----------------~~~~ 71 (203)
.++++|+|+|+++||+|+ .|++.+++.+ +++|+++..|+.. +.+.++.+|. .+++
T Consensus 133 ~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~d~~~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~ 205 (487)
T 2qyv_A 133 IAHPELEVLLTMTEERGM---EGAIGLRPNW----LRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNNFEHCYQ 205 (487)
T ss_dssp SCCSSEEEEEESCTTTTC---HHHHTCCSSC----CCCSEEEECCCCCTTEEEEEECEEEEEEEEEECCEEECCCSEEEE
T ss_pred CCCCCEEEEEEeccccCC---HHHHHHHHhc----cCCCEEEEEccCCCCeEEEeccCCcceeeeccccccccCCCeEEE
Confidence 477999999999999987 6999888643 3578898888764 3455555444 7799
Q ss_pred EEEee-cCCCcCCC-CCC-CCHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEEEE
Q 028821 72 LHVTG-KLFHSGLP-HKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTVS 148 (203)
Q Consensus 72 i~~~G-~~~Hss~p-~~g-~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~~~ 148 (203)
|+++| +++||+.| +.| .||+..+++++..++... + ..+++++.|+ ||.+.|+||++|++.
T Consensus 206 i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~~-----~-----------~~~~~v~~i~-gG~~~NvIP~~a~~~ 268 (487)
T 2qyv_A 206 VVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQNQ-----P-----------HFDFTLANIR-GGSIRNAIPRESVAT 268 (487)
T ss_dssp EEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHHC-----T-----------TCCEEEEEEE-EESCTTBCCCCEEEE
T ss_pred EEEEccCCccCCcccccCCCCHHHHHHHHHHHHhhcc-----C-----------CCcEEEEEEe-CCCcCcccCCceEEE
Confidence 99999 89999987 776 799999999999987641 1 2567899998 889999999999999
Q ss_pred EEe
Q 028821 149 GDV 151 (203)
Q Consensus 149 ~~i 151 (203)
+++
T Consensus 269 ~~~ 271 (487)
T 2qyv_A 269 LVF 271 (487)
T ss_dssp EEE
T ss_pred EEe
Confidence 999
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.78 E-value=6.3e-19 Score=148.95 Aligned_cols=187 Identities=13% Similarity=0.059 Sum_probs=123.4
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccC--CCCCCC---EEEeeCCC-------------C-----
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN--KLKGGP---LYWIDTAD-------------K----- 58 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~--~~~~d~---~i~~e~~~-------------~----- 58 (203)
++|++.+.+++++|+|+|++|||+|+ .|++++++.+... .+.+|. ++..+++. +
T Consensus 132 ~~l~~~~~~~~~~i~~i~~~~EE~g~---~G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~~~~g~~~~~ 208 (470)
T 1lfw_A 132 LLLKEAGFKPKKKIDFVLGTNEETNW---VGIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKNDDTKGDYVLD 208 (470)
T ss_dssp HHHHHHTCCCSSEEEEEEESCTTTTC---HHHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCCCCCCSBEEE
T ss_pred HHHHHcCCCCCCCEEEEEecCcccCC---ccHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccCCcCCCccee
Confidence 56777787889999999999999987 6999999864321 122343 23322210 1
Q ss_pred --------Ccee--------------------------eeeeeE-----EEEEEEeecCCCcCCCCCCCCHHHHHHHHHH
Q 028821 59 --------QPCI--------------------------GTGGMI-----PWKLHVTGKLFHSGLPHKAINPLELAMEALK 99 (203)
Q Consensus 59 --------~i~~--------------------------~~~g~~-----~~~i~~~G~~~Hss~p~~g~NAi~~~~~~l~ 99 (203)
.+.. +.+|.. +++|+++|+++|++.|+.|.||+..+++++.
T Consensus 209 ~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~ 288 (470)
T 1lfw_A 209 KFKAGIATNVTPQVTRATISGPDLEAVKLAYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLD 288 (470)
T ss_dssp EEEECSBTTBCCSEEEEEEECSCHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHT
T ss_pred eeecCCcCCcccccceEEecccchHHHHHHHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHH
Confidence 1110 234554 8999999999999999999999999999998
Q ss_pred HHH------HHH---hcCCCCC-CCc-----cccCCCCCceEeeEEEecCCCccceeCCe-EEEEEEeecCCCCCHHHHH
Q 028821 100 VIQ------TRF---YKDFPPH-PKE-----QVYGFETPSTMKPTQWSYPGGGINQIPGE-CTVSGDVRLTPFYNVTDVM 163 (203)
Q Consensus 100 ~l~------~~~---~~~~~~~-~~~-----~~~~~~~~~~~~~~~i~~gg~~~nvip~~-~~~~~~iR~~~~~~~~~~~ 163 (203)
.++ .+. .+.+.+. ... ......+..+++++.++ .+|++ |++.+++|+++.++.+++.
T Consensus 289 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~~~g~i~-------~~p~~~a~~~~diR~~~~~~~~~i~ 361 (470)
T 1lfw_A 289 QYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLASSPSMFD-------YEHAGKASLLNNVRYPQGTDPDTMI 361 (470)
T ss_dssp TSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEECEEEEEEEE-------EETTSCEEEEEEEEECTTCCHHHHH
T ss_pred hCCCcchhHHHHHHHHHhcCCCCcccccCCcccccccccceEEEEEEE-------EcCCceEEEEEEEecCCCCCHHHHH
Confidence 764 221 1111100 000 00011123567777765 58999 9999999999999999999
Q ss_pred HHHHHHHHHhhhcchhccccCCCCCCCCCCCCcccccc
Q 028821 164 KRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQL 201 (203)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (203)
++|++.++. ..+++.. ...++.++.+++++.+.+.
T Consensus 362 ~~i~~~~~~-g~~v~~~--~~~~~~~~~~d~~l~~~~~ 396 (470)
T 1lfw_A 362 KQVLDKFSG-ILDVTYN--GFEEPHYVPGSDPMVQTLL 396 (470)
T ss_dssp HHHHHHHTT-TEEEECS--CCBCCEECCTTCHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEE--eCCCceeeCCCCHHHHHHH
Confidence 999999876 3333321 2222334456777776543
No 27
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.76 E-value=1.3e-18 Score=147.76 Aligned_cols=137 Identities=20% Similarity=0.196 Sum_probs=105.8
Q ss_pred cCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC-CCce------------------eeeeeeEE
Q 028821 9 LKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD-KQPC------------------IGTGGMIP 69 (203)
Q Consensus 9 ~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~-~~i~------------------~~~~g~~~ 69 (203)
..++++|.|+|++|||+|+ .|++.+++.. +++|+++..|+.. +.+. .+++|..+
T Consensus 135 ~~~~~~v~~~~~~~EE~g~---~Ga~~~~~~~----~~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~ 207 (490)
T 3mru_A 135 EIKHGPIEVLLTIDEEAGM---TGAFGLEAGW----LKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFIT 207 (490)
T ss_dssp SCCCCSEEEEEESCSSSTT---GGGGTCCSSS----CCSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEE
T ss_pred CCCCCCEEEEEEccccccc---HhHHHhhhcc----cCCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceE
Confidence 3568999999999999987 6999887542 3567788777542 2221 23578899
Q ss_pred EEEEEee-cCCCcCC-CCCCC-CHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCceEeeEEEecCCCccceeCCeEE
Q 028821 70 WKLHVTG-KLFHSGL-PHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 146 (203)
Q Consensus 70 ~~i~~~G-~~~Hss~-p~~g~-NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gg~~~nvip~~~~ 146 (203)
++|+++| +++|++. |+.|+ ||+..+++++..|+. . .+++++.|+ ||.+.|+||++|+
T Consensus 208 ~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~----~---------------~~~~v~~i~-gG~~~NvIP~~a~ 267 (490)
T 3mru_A 208 RQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQ----E---------------LDLRLVEFR-GGSLRNAIPREAF 267 (490)
T ss_dssp EEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTT----T---------------TTCEEEEEE-ECSCTTEECCCEE
T ss_pred EEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHh----c---------------CcEEEEEEE-CCCCCcccCCccE
Confidence 9999999 8999995 89999 999999999987753 1 235788998 9999999999999
Q ss_pred EEEEeecCCCCCHHHHHHHHHHHHHH
Q 028821 147 VSGDVRLTPFYNVTDVMKRLQEYVDD 172 (203)
Q Consensus 147 ~~~~iR~~~~~~~~~~~~~i~~~~~~ 172 (203)
+.+++|..+....+++.+++.+.++.
T Consensus 268 ~~~~iR~~~~~~~~~~~~~~~~~~~~ 293 (490)
T 3mru_A 268 VTVALPAENQDKLAELFNYYTELLKT 293 (490)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHH
T ss_pred EEEEECcccHHHHHHHHHHHHHHHHH
Confidence 99999987654455555555554443
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.43 E-value=8.2e-09 Score=77.30 Aligned_cols=68 Identities=16% Similarity=0.200 Sum_probs=52.2
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEE---EeeCCCC-CceeeeeeeEEEE
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLY---WIDTADK-QPCIGTGGMIPWK 71 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i---~~e~~~~-~i~~~~~g~~~~~ 71 (203)
++|++.+.+++++|+|+|++|||.|+. .|++++++.+.+...++|+++ +.||+.. .++++++|..+++
T Consensus 126 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~~~~id~g~~ept~~~~v~~~~kG~~~~~ 197 (198)
T 1q7l_A 126 RRLKVEGHRFPRTIHMTFVPDEEVGGH--QGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVR 197 (198)
T ss_dssp HHHHHTTCCCSSCEEEEEESCGGGTST--TTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEEEECCSSCGGGC
T ss_pred HHHHHcCCCCCCCEEEEEEcccccCcc--ccHHHHHHhHHhccCCcCEEEecCccCCCCCceEEEEccEEEEEE
Confidence 467777777899999999999999731 699999976543345667888 6788764 5778999987664
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=98.19 E-value=4.8e-07 Score=70.78 Aligned_cols=64 Identities=16% Similarity=0.056 Sum_probs=47.4
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCCC-----ceeeeeee
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGM 67 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~ 67 (203)
++|++.+.+++++|+|+|++|||.|+. .|++.+++.....+.++|++|+.||+... +.++++|.
T Consensus 116 ~~l~~~~~~~~~~i~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~ 184 (269)
T 4h2k_A 116 EEYVKANPNHKGTIALLITSDEEATAK--DGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGG 184 (269)
T ss_dssp HHHHHHCTTCSSEEEEEEESCSSSCCT--TSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTC
T ss_pred HHHHHhCCCCCccEEEEEEeccccCcc--cCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccc
Confidence 456666667889999999999999862 39999987643344678999999998543 44455554
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=98.06 E-value=1.8e-06 Score=67.44 Aligned_cols=64 Identities=11% Similarity=-0.002 Sum_probs=47.3
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCCC-----ceeeeeee
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQ-----PCIGTGGM 67 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~-----i~~~~~g~ 67 (203)
++|++.+.+++++|+|+|++|||.|+. .|++.+++.......++|++|+.||+... +.++.+|.
T Consensus 116 ~~l~~~~~~~~~~v~~~~~~~EE~g~~--~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~ 184 (268)
T 3t68_A 116 ERFIAEHPDHQGSIGFLITSDEEGPFI--NGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGG 184 (268)
T ss_dssp HHHHHHCTTCSSEEEEEEESCTTSSSC--CHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGG
T ss_pred HHHHHhCCCCCCcEEEEEEeCCccCcc--cCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCC
Confidence 456666667889999999999999862 39999987643334578999999998543 34455554
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=97.79 E-value=3.3e-06 Score=68.20 Aligned_cols=62 Identities=18% Similarity=0.075 Sum_probs=44.6
Q ss_pred CCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCCCceeeeeeeEEEEEEEeecCCCcCCCCCCCC
Q 028821 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAIN 89 (203)
Q Consensus 10 ~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~~~G~~~Hss~p~~g~N 89 (203)
.++++|+|+|+++||.|+ .|++++++. +.+|++|+.|++... ++.|+++|++.|+.|.|
T Consensus 184 ~~~~~i~~~~~~~EE~G~---~G~~~~~~~-----~~~~~~i~~d~~~~~-------------~~~G~~~h~~~~~~G~g 242 (340)
T 2fvg_A 184 SPAYDTYFVFTVQEETGL---RGSAVVVEQ-----LKPTCAIVVETTTAG-------------DNPELEERKWATHLGDG 242 (340)
T ss_dssp CCSEEEEEEEECCCC--------CHHHHHH-----HCCSEEEEEEEEEEC-------------SCSTTCCSSSSCCTTSC
T ss_pred ccCCcEEEEEEcccccch---hhhHHHhhc-----cCCCEEEEEecccCC-------------CCCCCccccCCcccCCC
Confidence 467999999999999998 699998863 357889998876432 45788889888888877
Q ss_pred HHH
Q 028821 90 PLE 92 (203)
Q Consensus 90 Ai~ 92 (203)
++.
T Consensus 243 ~~i 245 (340)
T 2fvg_A 243 PAI 245 (340)
T ss_dssp CEE
T ss_pred cEE
Confidence 643
No 32
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=96.33 E-value=0.0019 Score=51.62 Aligned_cols=47 Identities=23% Similarity=0.252 Sum_probs=36.4
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~ 58 (203)
+.|++.+ ++++|+|+|+++||.|+ .|++++.+ .+.+|++|+.|++..
T Consensus 186 ~~l~~~~--~~~~i~~~~~~~EE~G~---~G~~~~~~-----~~~~~~~i~~d~~~~ 232 (332)
T 2wyr_A 186 KDLVDHE--LEGKVIFAFTVQEEVGL---KGAKFLAN-----HYYPQYAFAIDSFAC 232 (332)
T ss_dssp HTTTTSC--CSSEEEEEEESCGGGTS---HHHHHHTT-----TCCCSEEEEECCEEC
T ss_pred HHHhhcC--CCceEEEEEECccccCc---chHHHHhc-----ccCCCEEEEEecccc
Confidence 3455543 56899999999999998 79998864 246789999988643
No 33
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=96.11 E-value=0.0015 Score=51.62 Aligned_cols=52 Identities=19% Similarity=0.143 Sum_probs=37.6
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~ 56 (203)
++|++.+.+++++|+|+|+.+||.|. .|++++++.......+.+++|..|..
T Consensus 130 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~i~~D~~ 181 (299)
T 1rtq_A 130 RVLSENNFQPKRSIAFMAYAAEEVGL---RGSQDLANQYKSEGKNVVSALQLDMT 181 (299)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHHHHTTCEEEEEEECSCC
T ss_pred HHHHHcCCCCCceEEEEEECCccCCc---hhHHHHHHhhhhccccEEEEEEecCC
Confidence 46677777889999999999999997 79999987532221123456666654
No 34
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=95.99 E-value=0.0011 Score=53.46 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=32.5
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTADK 58 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~~ 58 (203)
+.|++.+.+++++|+|+|+++||+|+ .|++.+ .+++|++|..|++..
T Consensus 199 ~~l~~~~~~~~~~i~~~~~~~EE~G~---~g~~~~-------~~~~~~~i~~D~~~~ 245 (349)
T 2gre_A 199 KRLQDENVTLPYTTHFLISNNEEIGY---GGNSNI-------PEETVEYLAVDMGAL 245 (349)
T ss_dssp HHHHHHTCCCSEEEEEEEESCC-------CCCCCC-------CTTEEEEEEECCCCC
T ss_pred HHHHhccCCCCceEEEEEECcccCCc---hhhccc-------ccCCCEEEEEecccc
Confidence 45566666788999999999999998 587754 245678999888643
No 35
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=95.60 E-value=0.0042 Score=48.63 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=38.0
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccC-CCCCCCEEEeeCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~-~~~~d~~i~~e~~ 56 (203)
+.|++.+.+++++|+|+|+++||.|. .|++++++..... .-+.+++|..|..
T Consensus 110 ~~l~~~~~~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~i~~D~~ 162 (284)
T 1tkj_A 110 LAVSRAGYQPDKHLRFAWWGAEELGL---IGSKFYVNNLPSADRSKLAGYLNFDMI 162 (284)
T ss_dssp HHHHHTTCCCSEEEEEEEESCGGGTS---HHHHHHHHHSCHHHHTTEEEEEEECCC
T ss_pred HHHHhcCCCCCceEEEEEECCcccCC---cCHHHHHhhCccchhhcEEEEEEecCC
Confidence 56777777889999999999999987 7999998763211 0123467777754
No 36
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=95.56 E-value=0.0046 Score=50.28 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=34.3
Q ss_pred cccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC
Q 028821 3 KLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (203)
Q Consensus 3 ~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (203)
.|++.+ ++++|.|+|+++||.|+ .|++.+... +.+|++|+.|++.
T Consensus 198 ~l~~~~--~~~~v~~~~~~~EE~G~---~G~~~~~~~-----~~~d~~i~~d~~~ 242 (373)
T 1vhe_A 198 NLQNTD--HPNIVYGVGTVQEEVGL---RGAKTAAHT-----IQPDIAFGVDVGI 242 (373)
T ss_dssp HHHTSC--CSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred HHhhcC--CCceEEEEEECCcccCh---hhHHHHhcc-----cCCCEEEEEeccc
Confidence 444443 56899999999999998 799988542 3568899888754
No 37
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=95.43 E-value=0.0088 Score=50.47 Aligned_cols=70 Identities=14% Similarity=-0.069 Sum_probs=53.3
Q ss_pred CceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhhcchhccccCCCCCCCCCCCCcccccc
Q 028821 123 PSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQL 201 (203)
Q Consensus 123 ~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (203)
.+++|++.++ ..++++++.+++|+++..+.+++.+++++.++....+++.. ...++-++.++++|++.+.
T Consensus 347 ~~S~n~gv~~-------~~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~~g~~~~~~--~~~p~~~~~~d~~lv~~l~ 416 (490)
T 3mru_A 347 ETSLNVGVIT-------TEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEFS--GAYPGWKPDADSEIMAIFR 416 (490)
T ss_dssp EEEEEEEEEE-------EETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHTTCEEEEE--EEECCBCCCTTCHHHHHHH
T ss_pred eEEEEEEEEE-------EeCCEEEEEEEcCCCCchHHHHHHHHHHHHHHHcCCeEEec--CCCCCCCCCCCCHHHHHHH
Confidence 3667777776 56889999999999999999999999999998876666532 2233445578888887664
No 38
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=95.36 E-value=0.0065 Score=48.98 Aligned_cols=39 Identities=21% Similarity=0.090 Sum_probs=32.1
Q ss_pred CceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC
Q 028821 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (203)
Q Consensus 11 ~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (203)
++++|+|+|+++||.|+ .|++.+... +.+|++|+.|++.
T Consensus 200 ~~~~i~~~~~~~EE~g~---~G~~~~~~~-----~~~~~~i~~d~~~ 238 (353)
T 1y0y_A 200 AKADVYFVATVQEEVGL---RGARTSAFG-----IEPDYGFAIDVTI 238 (353)
T ss_dssp CSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEEE
T ss_pred CCCeEEEEEECCcccch---hHHHHHhhc-----cCCCEEEEEeccc
Confidence 67899999999999998 799988642 3578899888764
No 39
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=93.06 E-value=0.073 Score=42.12 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=34.6
Q ss_pred ccccccccCCceeEEEEEEecCCCCCC---C-------CccHHHHHhccccCCCCCCCEEEeeC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAI---T-------GVGVDALVKDGLLNKLKGGPLYWIDT 55 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~---~-------~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (203)
+.|++. .++++|.|+|..+||.|.. . ..|++++.+.......+..++|..|-
T Consensus 140 r~l~~~--~~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~ 201 (309)
T 3tc8_A 140 RQIGQK--APGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDM 201 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhC--CCCCcEEEEEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecc
Confidence 345555 3789999999999999850 0 15999999864322223445666664
No 40
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=92.71 E-value=0.078 Score=42.06 Aligned_cols=52 Identities=13% Similarity=0.148 Sum_probs=33.0
Q ss_pred ccccccccCCceeEEEEEEecCCCCCC---------C--CccHHHHHhccccCCCCCCCEEEeeC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAI---------T--GVGVDALVKDGLLNKLKGGPLYWIDT 55 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~---------~--~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (203)
++|++. .++++|.|+|..+||.|.. . ..|++++.+.......+..++|..|-
T Consensus 142 r~l~~~--~~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm 204 (314)
T 3gux_A 142 RQIQKE--QPALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDM 204 (314)
T ss_dssp HHHHHS--CCSSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEES
T ss_pred HHHHhC--CCCCcEEEEEECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEec
Confidence 345555 3789999999999999850 0 15999999764322233445666664
No 41
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=92.57 E-value=0.047 Score=45.46 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=31.5
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhcc
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~ 40 (203)
++|++.+.+++++|+|+|..+||.|. .|++++++..
T Consensus 282 ~~l~~~~~~~~~~i~f~~~~~EE~gl---~Gs~~~~~~~ 317 (444)
T 3iib_A 282 KHILDLPQKPERTIRVVLYAAEELGL---LGGKTYAKEH 317 (444)
T ss_dssp HHHHTSSSCCSEEEEEEEESCGGGTS---HHHHHHHHHT
T ss_pred HHHHhcCCCCCCeEEEEEECCcccCC---cCHHHHHHhh
Confidence 56777777899999999999999997 7999999864
No 42
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=89.81 E-value=0.22 Score=39.69 Aligned_cols=39 Identities=26% Similarity=0.164 Sum_probs=30.3
Q ss_pred CceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC
Q 028821 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (203)
Q Consensus 11 ~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (203)
+++++.++|+++||.|+ .|++..... +.+|++|..|++.
T Consensus 189 ~~~~~~~~~t~~EEvG~---~Ga~~~~~~-----i~~~~~i~~D~~~ 227 (348)
T 1ylo_A 189 LPAEVWLVASSSEEVGL---RGGQTATRA-----VSPDVAIVLDTAC 227 (348)
T ss_dssp CSSEEEEEEESCCTTSS---HHHHHHHHH-----HCCSEEEEECCCC
T ss_pred CCceEEEEEEcccccch---hHHHHhhcc-----cCCCEEEEEeccc
Confidence 56899999999999998 688776532 3567888888764
No 43
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=87.70 E-value=0.18 Score=40.26 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=29.2
Q ss_pred CceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCC
Q 028821 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (203)
Q Consensus 11 ~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~ 56 (203)
+++++.++|+.+||+|. .|++... ..+.+|.+|..|++
T Consensus 192 ~~~~~~~~~t~~EEvG~---~Ga~~~~-----~~i~~~~~i~~D~~ 229 (346)
T 1vho_A 192 HPWDVYVVFSVQEETGC---LGALTGA-----YEINPDAAIVMDVT 229 (346)
T ss_dssp CSSEEEEEEECTTSSSH---HHHHHTT-----CCCCCSEEEEEEEE
T ss_pred CCceEEEEEECCcccch---hhHHHHh-----cccCCCEEEEeecc
Confidence 56899999999999997 6877643 23567888887764
No 44
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=87.06 E-value=0.28 Score=39.52 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=29.6
Q ss_pred CCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCC
Q 028821 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (203)
Q Consensus 10 ~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~ 56 (203)
.+..+++++|+..||+|. .|++..... +.||.+|..|.+
T Consensus 201 ~~~~~v~~~ft~qEEvG~---~Ga~~a~~~-----~~pd~~i~~D~~ 239 (355)
T 3kl9_A 201 KLGNELYLGSNVQEEVGL---RGAHTSTTK-----FDPEVFLAVDCS 239 (355)
T ss_dssp CCSSEEEEEEESCCTTTS---HHHHHHHHH-----HCCSEEEEEEEE
T ss_pred CCCceEEEEEECccccCc---chhHHHHhc-----cCCCEEEEecCc
Confidence 467899999999999998 687665432 457788877654
No 45
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=86.44 E-value=0.27 Score=39.09 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=22.9
Q ss_pred cCCceeEEEEEEecCCC--------CCCCCccHHHHHhc
Q 028821 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (203)
Q Consensus 9 ~~~~~~v~l~~~~dEE~--------g~~~~~G~~~~~~~ 39 (203)
.+++++|.|+|..+||. |. .|++++++.
T Consensus 155 ~~~~~~i~~~~~~~EE~~~~~~~~~gl---~Gs~~~~~~ 190 (329)
T 2afw_A 155 SKPDLSLQLIFFDGEEAFLHWSPQDSL---YGSRHLAAK 190 (329)
T ss_dssp --CCEEEEEEEESCCSCSSSCCSSSSC---HHHHHHHHH
T ss_pred CCCCccEEEEEecCcccccccCCCccc---hhHHHHHHH
Confidence 47889999999999998 55 699999875
No 46
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=85.37 E-value=0.4 Score=39.45 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=33.2
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHHHhccccC-CCCCCCEEEeeCC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDALVKDGLLN-KLKGGPLYWIDTA 56 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~-~~~~d~~i~~e~~ 56 (203)
+.|++. .++++|+|+|..+||.|. .|++++++..... .-+..++|..|..
T Consensus 253 ~~l~~~--~~~~~i~~~~~~~EE~g~---~Gs~~~~~~~~~~~~~~~~~~in~D~~ 303 (421)
T 2ek8_A 253 RVMSKL--KTDTELRFITFGAEENGL---IGSKKYAASLSEDEIKRTIGMFQLDMV 303 (421)
T ss_dssp HHHTTS--CCSSEEEEEEESSSTTTS---HHHHHHHTTCCHHHHHHEEEEEEECSC
T ss_pred HHHhcc--CCCceEEEEEECCccccc---hhHHHHHHhCccchhhcEEEEEEeccc
Confidence 345543 567899999999999987 7999999753211 0012355666653
No 47
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=83.35 E-value=1.1 Score=35.26 Aligned_cols=52 Identities=10% Similarity=0.143 Sum_probs=33.9
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCC-----------CccHHHHHhccccCCCCCCCEEEeeC
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAIT-----------GVGVDALVKDGLLNKLKGGPLYWIDT 55 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~-----------~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (203)
+.|++. +++.+|+|+|..+||.|... ..|++++++.......+..++|..|-
T Consensus 140 r~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDm 202 (309)
T 4fuu_A 140 RLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDM 202 (309)
T ss_dssp HHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECS
T ss_pred HHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeec
Confidence 345543 67899999999999987310 15899998764333333445666663
No 48
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=80.67 E-value=0.6 Score=37.61 Aligned_cols=37 Identities=14% Similarity=0.008 Sum_probs=27.8
Q ss_pred CceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeC
Q 028821 11 LKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDT 55 (203)
Q Consensus 11 ~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~ 55 (203)
+..+++++|+.-||+|+ .|+..... .+.||.+|..|.
T Consensus 203 ~~~~v~~~ft~qEEVG~---~ga~~aa~-----~i~pd~~i~~Dv 239 (354)
T 2vpu_A 203 HEADIYIVGSVQEEVGL---RGARVASY-----AINPEVGIAMDV 239 (354)
T ss_dssp CSSEEEEEECSCCTTTS---HHHHHHHH-----HHCCSEEEEEEE
T ss_pred CCCeEEEEEECCcccCc---cchhhhhc-----ccCCCEEEEecc
Confidence 67899999999999998 68765432 245777776664
No 49
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=79.61 E-value=1.3 Score=34.94 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=27.3
Q ss_pred EEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCCC
Q 028821 15 VIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTAD 57 (203)
Q Consensus 15 v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~~ 57 (203)
++++|+++||+|+ .|++..... ....+.+|++|..|++.
T Consensus 183 i~~~~t~~EEvG~---~Ga~~a~~~-~~~~~~~~~~i~~D~~~ 221 (321)
T 3cpx_A 183 GIIAFTCWEEHGG---GSVAYLARW-IYETFHVKQSLICDITW 221 (321)
T ss_dssp EEEEEESSTTTTC---CSHHHHHHH-HHHHHCCCEEEECCCEE
T ss_pred cEEEEECCccCch---hcchhhhhc-cccccCCCEEEEEeCcc
Confidence 8999999999998 588754310 00124578899888864
No 50
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=79.14 E-value=1.6 Score=34.18 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=25.2
Q ss_pred ccCCceeEEEEEEecCCCCCC-----CCccHHHHHhc
Q 028821 8 KLKLKSTVIAVFIASEENSAI-----TGVGVDALVKD 39 (203)
Q Consensus 8 ~~~~~~~v~l~~~~dEE~g~~-----~~~G~~~~~~~ 39 (203)
+.+++++|+|+|..+||.|.. ...|+++++++
T Consensus 127 ~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~ 163 (312)
T 4f9u_A 127 RNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAK 163 (312)
T ss_dssp GSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHH
T ss_pred cCCCCceEEEEEecCccccccCCccccccChHHHHHH
Confidence 447889999999999998721 02699999976
No 51
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=77.76 E-value=0.81 Score=39.86 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=27.4
Q ss_pred cccCCceeEEEEEEecCCCCCCCCccHHHHHhcc
Q 028821 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKDG 40 (203)
Q Consensus 7 ~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~ 40 (203)
.+.+|+++|+|++..+||.|. .|+.++++..
T Consensus 320 ~g~~p~r~I~f~~~~~EE~gl---~GS~~~~~~~ 350 (640)
T 3kas_A 320 DGFQPSRSIIFASWSAGDFGS---VGATEWLEGY 350 (640)
T ss_dssp SCCCCSEEEEEEEESSGGGTS---HHHHHHHHHT
T ss_pred cCCCCCCcEEEEEECCcccCc---hhHHHHHHhh
Confidence 467899999999999999997 7999999763
No 52
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=76.94 E-value=0.019 Score=44.80 Aligned_cols=84 Identities=10% Similarity=-0.118 Sum_probs=39.3
Q ss_pred CCceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEe-eCCCCCceeeeeeeEEEEEEEeecCCCcCCCCCCC
Q 028821 10 KLKSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWI-DTADKQPCIGTGGMIPWKLHVTGKLFHSGLPHKAI 88 (203)
Q Consensus 10 ~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~-e~~~~~i~~~~~g~~~~~i~~~G~~~Hss~p~~g~ 88 (203)
.+.+.+.++++.+||.+. .|.+.+........ .++... ++....+..+..+.....+...+..+|++.+..+.
T Consensus 114 ~~~~~~~~~~~~~ee~~~---~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (354)
T 2wzn_A 114 ERYGVVGVLPPHLRRGQE---DKGSKIDWDQIVVD---VGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDR 187 (354)
T ss_dssp EEEEEECCCCGGGC------------CCGGGCCEE---CSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHH
T ss_pred CccceEEEeeeeeEeccc---ccccchhhhhhhhh---hcccchhhhhccccccceeeeeeeeeEeeccccccccccccc
Confidence 345677888999999876 46655543322111 111111 11122334455666667777788888887655444
Q ss_pred CHHHHHHHHHH
Q 028821 89 NPLELAMEALK 99 (203)
Q Consensus 89 NAi~~~~~~l~ 99 (203)
+++..+...+.
T Consensus 188 ~~~~~~~~~~~ 198 (354)
T 2wzn_A 188 ICLYAMIEAAR 198 (354)
T ss_dssp HHHHHHHHHHH
T ss_pred chhhhHHHHHH
Confidence 44444444443
No 53
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=75.90 E-value=1.1 Score=39.63 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=26.9
Q ss_pred cccCCceeEEEEEEecCCCCCCCCccHHHHHhc
Q 028821 7 TKLKLKSTVIAVFIASEENSAITGVGVDALVKD 39 (203)
Q Consensus 7 ~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~~~~ 39 (203)
.+++++++|+|++..+||.|. .|++++++.
T Consensus 365 ~g~~p~r~I~f~~~~~EE~Gl---~GS~~~~~~ 394 (707)
T 3fed_A 365 KGWRPRRTIIFASWDAEEFGL---LGSTEWAEE 394 (707)
T ss_dssp TTCCCSEEEEEEEESCGGGTS---HHHHHHHHH
T ss_pred ccCCCCCCEEEEEeCCccccc---hhHHHHHHh
Confidence 467899999999999999997 799999875
No 54
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=74.89 E-value=0.92 Score=36.35 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=27.7
Q ss_pred ceeEEEEEEecCCCCCCCCccHHHHHhccccCCCCCCCEEEeeCC
Q 028821 12 KSTVIAVFIASEENSAITGVGVDALVKDGLLNKLKGGPLYWIDTA 56 (203)
Q Consensus 12 ~~~v~l~~~~dEE~g~~~~~G~~~~~~~~~~~~~~~d~~i~~e~~ 56 (203)
..+++++|+.-||+|. .|++... ..+.||.+|..|.+
T Consensus 198 ~~~~~~~ft~qEEVG~---~Ga~~aa-----~~i~pd~~i~vDv~ 234 (343)
T 3isx_A 198 AVTLYGVFSVQEEVGL---VGASVAG-----YGVPADEAIAIDVT 234 (343)
T ss_dssp SSEEEEEEECCCCTTS---CCSTTTG-----GGCCCSEEEEEEEE
T ss_pred CCeEEEEEECCcccCc---hhHHHHh-----hcCCCCEEEEEeCc
Confidence 5799999999999998 5764332 34668888877754
No 55
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=73.94 E-value=1.5 Score=34.98 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=24.6
Q ss_pred cCCceeEEEEEEecCCC--------CCCCCccHHHHHhc
Q 028821 9 LKLKSTVIAVFIASEEN--------SAITGVGVDALVKD 39 (203)
Q Consensus 9 ~~~~~~v~l~~~~dEE~--------g~~~~~G~~~~~~~ 39 (203)
..++.+|.|+|..+||. |. .|++++++.
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl---~GS~~~a~~ 194 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSL---YGSRHLAQL 194 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSC---HHHHHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCC---ccHHHHHHH
Confidence 57899999999999998 66 799999864
No 56
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=73.81 E-value=2.2 Score=33.77 Aligned_cols=32 Identities=25% Similarity=0.243 Sum_probs=25.0
Q ss_pred ccCCceeEEEEEEecCCCCCC-----CCccHHHHHhc
Q 028821 8 KLKLKSTVIAVFIASEENSAI-----TGVGVDALVKD 39 (203)
Q Consensus 8 ~~~~~~~v~l~~~~dEE~g~~-----~~~G~~~~~~~ 39 (203)
+.+++.+|+|+|..+||.|.. ...|++++++.
T Consensus 151 ~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~ 187 (330)
T 4fai_A 151 LKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKK 187 (330)
T ss_dssp GGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHH
T ss_pred cCCCCccEEEEEeccccccccccccchhhhhHHHHhc
Confidence 457889999999999998731 01499999875
No 57
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=62.01 E-value=13 Score=20.64 Aligned_cols=30 Identities=10% Similarity=0.338 Sum_probs=23.0
Q ss_pred CCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhh
Q 028821 142 PGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 175 (203)
Q Consensus 142 p~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~ 175 (203)
-|..++.+|-+-.| .+++++|+.++++...
T Consensus 20 Gd~Vsf~Ld~~~iP----~~~IeKIE~lL~e~~k 49 (52)
T 3kz5_E 20 GDKMVLNLDRSRVP----TECIEKIEAILKELEK 49 (52)
T ss_dssp TTEEEEEEETTTSC----HHHHHHHHHHHHHHC-
T ss_pred CCeEEEEeccccCC----HHHHHHHHHHHHHHhh
Confidence 46778888866555 8899999999988653
No 58
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=51.67 E-value=20 Score=29.71 Aligned_cols=69 Identities=10% Similarity=-0.124 Sum_probs=46.7
Q ss_pred CceEeeEEEecCCCccceeCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhhcchhccccCCCCCCCCCCCCccccc
Q 028821 123 PSTMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRQ 200 (203)
Q Consensus 123 ~~~~~~~~i~~gg~~~nvip~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (203)
.+++|++.++ ...+++.+.+++|++.....+.+.+.++..++....+++.. ...++-+..+++++.+.+
T Consensus 345 ~~s~nl~~~~-------~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~p~~~~~~d~~l~~~~ 413 (487)
T 2qyv_A 345 ETSLSIGVLK-------TEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNINLS--GDYPGWEPQSHSDILDLT 413 (487)
T ss_dssp EEEEEEEEEE-------ECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEEEEE--EEECCBCCCSCCHHHHHH
T ss_pred EeccceEEEE-------EcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceEEEC--CCCCCCCCCCCCHHHHHH
Confidence 3677888887 34567899999999987777778888877777665555422 112233444677776654
No 59
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=48.54 E-value=7.8 Score=24.11 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=27.4
Q ss_pred EEEEEEeecCCCCCHHHHHHHHHHHHHHhhhcch
Q 028821 145 CTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIE 178 (203)
Q Consensus 145 ~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~ 178 (203)
+.+++.||.+++.+..++.+.|.+.++-.++.+.
T Consensus 12 ~~~tvairvp~~~~y~~L~~~l~~kL~l~~~~~~ 45 (83)
T 1oey_A 12 YKYTVVMKTQPGLPYSQVRDMVSKKLELRLEHTK 45 (83)
T ss_dssp SSSEEEEEECTTCCHHHHHHHHHHHTTCCGGGCC
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHhCCCcceeE
Confidence 3467889999999999999999998876554443
No 60
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=45.62 E-value=35 Score=20.34 Aligned_cols=34 Identities=9% Similarity=0.170 Sum_probs=27.5
Q ss_pred CeEEEEEEeecCCCCCHHHHHHHHHHHHHHhhhc
Q 028821 143 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN 176 (203)
Q Consensus 143 ~~~~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~ 176 (203)
+--++.+|+|...+...+..+.++++++...+..
T Consensus 15 dgqeieidirvstgkeleralqelekalaragar 48 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGAR 48 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTCS
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhcccc
Confidence 4457889999999888888888888888877654
No 61
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=29.53 E-value=45 Score=27.36 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=20.4
Q ss_pred ccccccccCCceeEEEEEEecCCCCCCCCccHHHH
Q 028821 2 RKLGETKLKLKSTVIAVFIASEENSAITGVGVDAL 36 (203)
Q Consensus 2 k~L~~~~~~~~~~v~l~~~~dEE~g~~~~~G~~~~ 36 (203)
++|.+.. ...-+|+++| ..||+|+ .|+.-.
T Consensus 245 ~al~~~~-~~~~~v~~~f-d~EEVGs---~ga~gA 274 (428)
T 2ijz_A 245 EALLNAE-GDENCILVCT-DHEEVGS---CSHCGA 274 (428)
T ss_dssp THHHHTT-SCSSSCEEEE-CBSCTTT---TCHHHH
T ss_pred HHHHhcc-cCCceEEEEE-eccccCc---cchhhh
Confidence 3444433 4557888888 8999998 576544
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=24.07 E-value=26 Score=29.09 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=18.4
Q ss_pred cccccccCCceeEEEEEEecCCCCC
Q 028821 3 KLGETKLKLKSTVIAVFIASEENSA 27 (203)
Q Consensus 3 ~L~~~~~~~~~~v~l~~~~dEE~g~ 27 (203)
+|.+.. .+..+++++|+..||+|+
T Consensus 272 al~~~~-~~~~~~~~~~~d~EEVGs 295 (461)
T 2glj_A 272 AMLEMK-NAKKTCITILVDKEEVGS 295 (461)
T ss_dssp HHHTCC-SCSSCEEEEEECCGGGTC
T ss_pred HHHhhc-cCCCeEEEEEEccCCCCC
Confidence 344433 467899999999999998
No 63
>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A
Probab=22.46 E-value=90 Score=19.35 Aligned_cols=24 Identities=8% Similarity=0.056 Sum_probs=21.2
Q ss_pred EEeecCCCCCHHHHHHHHHHHHHH
Q 028821 149 GDVRLTPFYNVTDVMKRLQEYVDD 172 (203)
Q Consensus 149 ~~iR~~~~~~~~~~~~~i~~~~~~ 172 (203)
+-+|.|++.++.++.++|.+.++-
T Consensus 24 iAIrvP~di~~~~L~dKi~~RLk~ 47 (85)
T 1ip9_A 24 FALMLKGDTTYKELRSKIAPRIDT 47 (85)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHHHHhcc
Confidence 467999999999999999998875
Done!