Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>028822
MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLA
ALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSV
GYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKV
TGHLGLFFLEFPLEVKQEYHVRF

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028822
        (203 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018154 - symbol:AT1G52330 "AT1G52330" species...   406  7.0e-38   1
TAIR|locus:2142040 - symbol:AT4G13270 "AT4G13270" species...   348  9.8e-32   1
TAIR|locus:2080320 - symbol:AT3G54200 "AT3G54200" species...   129  4.5e-07   1


>TAIR|locus:2018154 [details] [associations]
            symbol:AT1G52330 "AT1G52330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002684 UniGene:At.37618
            UniGene:At.66802 Pfam:PF03168 HOGENOM:HOG000005936 EMBL:AY924709
            EMBL:DQ132677 IPI:IPI00555530 RefSeq:NP_001077704.1
            ProteinModelPortal:Q5BPW9 PRIDE:Q5BPW9 EnsemblPlants:AT1G52330.2
            GeneID:841664 KEGG:ath:AT1G52330 TAIR:At1g52330 eggNOG:NOG284882
            PhylomeDB:Q5BPW9 ProtClustDB:CLSN2679483 Genevestigator:Q5BPW9
            Uniprot:Q5BPW9
        Length = 227

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 82/187 (43%), Positives = 113/187 (60%)

Query:    11 PPATPSQPHYYTVLPPQPQDE-NYTILPYYYLENPRRNWYATXXXXXXXXXXXXYVFWPS 69
             P ATPS P Y   LP     E N  +L   +   P R  +              Y+FWPS
Sbjct:     7 PKATPSLPDYKP-LPSSSSHELNDAVLISSHPSPPSRRRFIISIFLISFASILIYIFWPS 65

Query:    70 EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
             +P +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGH
Sbjct:    66 DPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGH 125

Query:   130 VKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFL 189
             V S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G LG+ F 
Sbjct:   126 VSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVLFF 185

Query:   190 EFPLEVK 196
              FPL+V+
Sbjct:   186 RFPLKVR 192


>TAIR|locus:2142040 [details] [associations]
            symbol:AT4G13270 "AT4G13270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0000902 "cell morphogenesis" evidence=RCA]
            [GO:0016049 "cell growth" evidence=RCA] [GO:0048193 "Golgi vesicle
            transport" evidence=RCA] InterPro:IPR004864 EMBL:CP002687
            UniGene:At.33396 UniGene:At.70329 Pfam:PF03168 EMBL:BT021984
            EMBL:BT023476 IPI:IPI00523539 RefSeq:NP_193063.2
            ProteinModelPortal:Q52K84 SMR:Q52K84 PRIDE:Q52K84
            EnsemblPlants:AT4G13270.1 GeneID:826957 KEGG:ath:AT4G13270
            TAIR:At4g13270 HOGENOM:HOG000005936 InParanoid:Q52K84 OMA:SCEVYVN
            PhylomeDB:Q52K84 ProtClustDB:CLSN2690897 Genevestigator:Q52K84
            Uniprot:Q52K84
        Length = 215

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 74/181 (40%), Positives = 108/181 (59%)

Query:    21 YTVLPP-QPQDENYTILPYYYLENPR--RNWYATXXXXXXXX--XXXXYVFWPSEPELKI 75
             YT LP  QP      + PY     P   RN   +              Y+ +PS+P++ +
Sbjct:    13 YTPLPSSQPSQSVILLTPYRRHRRPSLLRNLRCSLLFTAVILLLSAAVYLLYPSDPDITV 72

Query:    76 ERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHG 135
              R++L H  V     I +D+S ++T+KV NRD +S++Y SL VS+GYRGR+LG VKS  G
Sbjct:    73 SRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRELGLVKSKGG 132

Query:   136 RVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEV 195
              +KA  SS+IDA L+L  ++V+ DV+YL+ DLA+G +PFDTI +V G LG+     P++ 
Sbjct:   133 HLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVLLFNIPIQG 192

Query:   196 K 196
             K
Sbjct:   193 K 193


>TAIR|locus:2080320 [details] [associations]
            symbol:AT3G54200 "AT3G54200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0046658 "anchored to plasma membrane"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR004864
            GO:GO:0009506 EMBL:CP002686 GO:GO:0046658 EMBL:AL132957
            Pfam:PF03168 EMBL:AK229134 IPI:IPI00521889 PIR:T47579
            RefSeq:NP_190988.1 UniGene:At.27525 ProteinModelPortal:Q9M386
            STRING:Q9M386 PRIDE:Q9M386 EnsemblPlants:AT3G54200.1 GeneID:824587
            KEGG:ath:AT3G54200 TAIR:At3g54200 InParanoid:Q9M386 OMA:NASSMET
            PhylomeDB:Q9M386 ProtClustDB:CLSN2685083 Genevestigator:Q9M386
            Uniprot:Q9M386
        Length = 235

 Score = 129 (50.5 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 34/135 (25%), Positives = 66/135 (48%)

Query:    65 VFWPSEPELKIERLHLAHFHVRMKPA---ICIDISLNVTLKVHNRDVYSVNYKSLDVSVG 121
             +F P  P   I+ + +      + P    + ++++LNV L + N +    +Y S    + 
Sbjct:    76 LFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLN 135

Query:   122 YRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVT 181
             YRG+ +G       R+ A  +  ++  L L   ++LS+   LL D+  G +P +T  KVT
Sbjct:   136 YRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSET-QLLSDVMAGVIPLNTFVKVT 194

Query:   182 GHLGLFFLEFPLEVK 196
             G + +  + F ++V+
Sbjct:   195 GKVTVLKI-FKIKVQ 208


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      203       191   0.00094  110 3  11 22  0.43    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  171 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.36u 0.11s 18.47t   Elapsed:  00:00:01
  Total cpu time:  18.36u 0.11s 18.47t   Elapsed:  00:00:01
  Start:  Thu May  9 16:09:58 2013   End:  Thu May  9 16:09:59 2013

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