Query 028824
Match_columns 203
No_of_seqs 264 out of 2060
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 04:24:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028824.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028824hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4esy_A CBS domain containing m 99.7 1E-16 3.4E-21 125.8 6.9 103 80-184 15-156 (170)
2 3k6e_A CBS domain protein; str 99.6 1.6E-15 5.4E-20 118.3 10.8 111 82-192 14-144 (156)
3 3lv9_A Putative transporter; C 99.6 8.1E-15 2.8E-19 111.9 11.1 110 78-188 18-143 (148)
4 3jtf_A Magnesium and cobalt ef 99.6 9.2E-15 3.1E-19 109.4 10.3 107 81-188 3-124 (129)
5 3lhh_A CBS domain protein; str 99.5 2.3E-14 7.8E-19 112.7 10.4 110 78-188 37-162 (172)
6 3ctu_A CBS domain protein; str 99.5 2.5E-14 8.5E-19 109.9 10.2 121 79-199 11-151 (156)
7 3lfr_A Putative metal ION tran 99.5 9E-15 3.1E-19 110.5 7.4 107 82-188 2-125 (136)
8 3fv6_A YQZB protein; CBS domai 99.5 2.5E-14 8.6E-19 110.6 10.0 117 77-196 11-150 (159)
9 3gby_A Uncharacterized protein 99.5 6.2E-14 2.1E-18 104.4 11.7 106 81-189 3-125 (128)
10 3i8n_A Uncharacterized protein 99.5 7.3E-15 2.5E-19 109.9 6.6 109 80-188 3-127 (130)
11 3ocm_A Putative membrane prote 99.5 3.3E-14 1.1E-18 112.5 10.7 109 79-188 32-155 (173)
12 3fhm_A Uncharacterized protein 99.5 4.6E-14 1.6E-18 109.8 10.6 111 77-187 18-147 (165)
13 1yav_A Hypothetical protein BS 99.5 2.7E-14 9.3E-19 110.2 8.9 117 78-194 9-146 (159)
14 2o16_A Acetoin utilization pro 99.5 2.9E-14 9.9E-19 110.6 9.0 110 81-192 3-137 (160)
15 3nqr_A Magnesium and cobalt ef 99.5 2.2E-14 7.5E-19 106.9 7.8 106 82-187 2-123 (127)
16 3kpb_A Uncharacterized protein 99.5 4.6E-14 1.6E-18 103.6 9.3 103 83-188 1-118 (122)
17 3hf7_A Uncharacterized CBS-dom 99.5 1.6E-14 5.3E-19 108.5 6.8 106 83-188 2-125 (130)
18 2yzi_A Hypothetical protein PH 99.5 1.6E-13 5.5E-18 102.9 12.4 109 79-189 3-128 (138)
19 3lqn_A CBS domain protein; csg 99.5 3.1E-14 1.1E-18 108.5 8.3 113 78-190 10-143 (150)
20 2ef7_A Hypothetical protein ST 99.5 1.5E-13 5.1E-18 102.5 11.2 108 81-191 2-126 (133)
21 3oco_A Hemolysin-like protein 99.5 2.7E-14 9.2E-19 109.8 6.9 110 79-189 16-142 (153)
22 2emq_A Hypothetical conserved 99.5 1.4E-13 4.9E-18 105.4 11.0 115 78-192 6-141 (157)
23 4gqw_A CBS domain-containing p 99.5 9.4E-14 3.2E-18 105.2 9.5 109 81-189 3-142 (152)
24 1pbj_A Hypothetical protein; s 99.5 1.4E-13 4.7E-18 101.3 9.2 103 83-188 1-120 (125)
25 3sl7_A CBS domain-containing p 99.5 1E-13 3.6E-18 108.1 8.4 111 82-192 3-158 (180)
26 3oi8_A Uncharacterized protein 99.5 7.2E-14 2.5E-18 108.0 7.4 106 79-184 34-154 (156)
27 2rih_A Conserved protein with 99.5 3.4E-13 1.2E-17 101.8 10.2 109 82-192 4-130 (141)
28 2j9l_A Chloride channel protei 99.5 2.3E-13 7.8E-18 106.8 9.4 113 80-192 8-167 (185)
29 3kxr_A Magnesium transporter, 99.5 7E-13 2.4E-17 107.9 12.6 107 79-190 50-174 (205)
30 2pfi_A Chloride channel protei 99.5 2.5E-13 8.7E-18 104.4 9.3 111 80-192 10-149 (164)
31 1y5h_A Hypothetical protein RV 99.4 1.1E-13 3.7E-18 103.2 6.8 104 81-186 6-127 (133)
32 2rc3_A CBS domain; in SITU pro 99.4 4.9E-13 1.7E-17 100.1 10.4 103 83-188 6-129 (135)
33 2p9m_A Hypothetical protein MJ 99.4 2.5E-13 8.5E-18 101.7 8.7 109 79-189 4-135 (138)
34 2d4z_A Chloride channel protei 99.4 3.5E-13 1.2E-17 113.4 10.0 59 80-140 10-70 (250)
35 3k2v_A Putative D-arabinose 5- 99.4 3.4E-13 1.2E-17 103.0 8.9 104 82-185 27-147 (149)
36 1o50_A CBS domain-containing p 99.4 5.9E-13 2E-17 102.5 10.0 108 78-189 11-152 (157)
37 1pvm_A Conserved hypothetical 99.4 5.6E-13 1.9E-17 105.5 8.8 105 82-188 8-131 (184)
38 4fry_A Putative signal-transdu 99.4 2E-12 6.8E-17 99.2 9.6 107 83-190 7-135 (157)
39 2uv4_A 5'-AMP-activated protei 99.4 2.3E-12 7.9E-17 98.7 9.0 108 77-188 17-149 (152)
40 2nyc_A Nuclear protein SNF4; b 99.4 2.2E-12 7.7E-17 96.8 8.7 106 81-188 6-139 (144)
41 1vr9_A CBS domain protein/ACT 99.3 6.5E-12 2.2E-16 102.2 11.4 104 82-190 12-130 (213)
42 3ddj_A CBS domain-containing p 99.3 2.8E-12 9.6E-17 107.9 8.6 121 68-190 137-285 (296)
43 2oux_A Magnesium transporter; 99.3 6.1E-12 2.1E-16 107.1 10.3 107 79-190 133-259 (286)
44 2yvy_A MGTE, Mg2+ transporter 99.3 1.2E-11 4.2E-16 104.4 11.6 105 80-189 132-256 (278)
45 3kh5_A Protein MJ1225; AMPK, A 99.3 1.8E-11 6.1E-16 101.4 11.8 105 82-188 83-203 (280)
46 3pc3_A CG1753, isoform A; CBS, 99.3 3.5E-12 1.2E-16 117.2 8.2 109 80-190 381-511 (527)
47 3ddj_A CBS domain-containing p 99.3 9.8E-12 3.3E-16 104.6 10.3 120 68-189 62-213 (296)
48 3l2b_A Probable manganase-depe 99.3 5.4E-12 1.8E-16 104.1 8.4 58 82-141 6-63 (245)
49 2yzq_A Putative uncharacterize 99.3 7.4E-12 2.5E-16 104.2 8.9 120 68-192 104-278 (282)
50 3t4n_C Nuclear protein SNF4; C 99.3 6.1E-12 2.1E-16 107.1 8.4 119 68-188 163-318 (323)
51 2zy9_A Mg2+ transporter MGTE; 99.2 7.4E-11 2.5E-15 107.3 11.9 107 79-190 151-277 (473)
52 2yzq_A Putative uncharacterize 99.2 6.6E-11 2.3E-15 98.4 10.5 116 68-185 45-179 (282)
53 3org_A CMCLC; transporter, tra 99.2 5E-12 1.7E-16 118.7 3.6 61 81-141 451-512 (632)
54 3kh5_A Protein MJ1225; AMPK, A 99.2 3E-11 1E-15 100.0 6.5 116 68-186 128-277 (280)
55 3ghd_A A cystathionine beta-sy 99.2 1.5E-10 5.1E-15 79.0 8.3 63 95-158 2-68 (70)
56 2qrd_G Protein C1556.08C; AMPK 99.1 8.9E-11 3E-15 100.3 7.4 120 68-189 158-314 (334)
57 2v8q_E 5'-AMP-activated protei 99.0 7.5E-10 2.6E-14 94.5 9.5 111 80-190 32-177 (330)
58 3nqr_A Magnesium and cobalt ef 99.0 8.1E-10 2.8E-14 81.8 7.7 71 68-141 50-124 (127)
59 3usb_A Inosine-5'-monophosphat 99.0 6.8E-10 2.3E-14 102.0 8.6 102 85-190 115-234 (511)
60 3kxr_A Magnesium transporter, 99.0 7.3E-10 2.5E-14 89.9 7.6 72 68-141 101-172 (205)
61 3lfr_A Putative metal ION tran 99.0 1.1E-09 3.7E-14 82.3 7.9 71 68-141 50-125 (136)
62 3jtf_A Magnesium and cobalt ef 99.0 1.3E-09 4.3E-14 81.1 7.9 71 68-141 52-124 (129)
63 4esy_A CBS domain containing m 99.0 7.1E-10 2.4E-14 86.4 6.8 57 82-141 104-160 (170)
64 3fio_A A cystathionine beta-sy 99.0 2E-09 7E-14 71.6 7.9 62 95-157 2-67 (70)
65 1vr9_A CBS domain protein/ACT 99.0 1.3E-09 4.5E-14 88.5 8.1 73 68-142 57-129 (213)
66 2v8q_E 5'-AMP-activated protei 99.0 1.7E-09 6E-14 92.2 9.3 119 68-188 163-321 (330)
67 4fxs_A Inosine-5'-monophosphat 99.0 4.2E-10 1.5E-14 103.0 5.0 100 84-187 90-206 (496)
68 3gby_A Uncharacterized protein 98.9 7E-10 2.4E-14 82.1 5.1 72 68-141 48-124 (128)
69 4gqw_A CBS domain-containing p 98.9 1E-09 3.5E-14 82.7 5.9 73 68-142 51-142 (152)
70 1zfj_A Inosine monophosphate d 98.9 3.3E-09 1.1E-13 96.4 10.1 102 84-189 91-210 (491)
71 3lhh_A CBS domain protein; str 98.9 1.1E-09 3.8E-14 85.6 5.7 72 68-142 89-163 (172)
72 3sl7_A CBS domain-containing p 98.9 1.3E-09 4.3E-14 84.7 5.9 59 81-141 96-154 (180)
73 2rih_A Conserved protein with 98.9 1.9E-09 6.5E-14 81.0 6.5 71 68-141 51-126 (141)
74 3t4n_C Nuclear protein SNF4; C 98.9 4.9E-09 1.7E-13 89.0 9.5 102 86-189 117-247 (323)
75 3kpb_A Uncharacterized protein 98.9 1.5E-09 5.2E-14 79.1 5.2 72 68-141 45-118 (122)
76 2rc3_A CBS domain; in SITU pro 98.9 1.8E-09 6.3E-14 80.3 5.6 71 68-141 52-129 (135)
77 3i8n_A Uncharacterized protein 98.9 1.7E-09 5.7E-14 80.4 5.3 71 68-141 53-127 (130)
78 3lv9_A Putative transporter; C 98.9 1.6E-09 5.5E-14 82.1 5.3 71 68-141 70-143 (148)
79 2qrd_G Protein C1556.08C; AMPK 98.9 6.3E-09 2.1E-13 88.7 9.6 62 80-141 19-81 (334)
80 3oco_A Hemolysin-like protein 98.9 1.8E-09 6E-14 82.6 5.5 72 68-142 68-142 (153)
81 3k6e_A CBS domain protein; str 98.9 1E-09 3.5E-14 85.1 3.9 85 49-141 46-140 (156)
82 3oi8_A Uncharacterized protein 98.9 3.4E-09 1.2E-13 81.5 6.8 68 68-138 85-155 (156)
83 3lqn_A CBS domain protein; csg 98.9 2.4E-09 8.4E-14 81.0 5.8 71 68-142 61-142 (150)
84 2ef7_A Hypothetical protein ST 98.9 4.1E-09 1.4E-13 78.1 6.7 73 68-142 47-124 (133)
85 3hf7_A Uncharacterized CBS-dom 98.9 2.8E-09 9.7E-14 79.5 5.7 71 68-141 49-125 (130)
86 3fhm_A Uncharacterized protein 98.8 2.8E-09 9.6E-14 82.5 5.5 72 68-142 71-149 (165)
87 1vrd_A Inosine-5'-monophosphat 98.8 3.4E-10 1.2E-14 103.2 0.2 102 84-189 96-214 (494)
88 1y5h_A Hypothetical protein RV 98.8 4.2E-09 1.4E-13 78.0 6.0 71 68-141 52-129 (133)
89 1me8_A Inosine-5'-monophosphat 98.8 3.2E-10 1.1E-14 103.9 -0.3 105 83-190 96-221 (503)
90 1pbj_A Hypothetical protein; s 98.8 2.8E-09 9.5E-14 77.9 4.7 71 68-141 44-120 (125)
91 3fv6_A YQZB protein; CBS domai 98.8 4.2E-09 1.4E-13 81.0 5.8 75 68-142 60-143 (159)
92 2p9m_A Hypothetical protein MJ 98.8 4.6E-09 1.6E-13 78.2 5.8 72 68-141 52-134 (138)
93 4fry_A Putative signal-transdu 98.8 4.3E-09 1.5E-13 80.4 5.6 72 68-142 56-134 (157)
94 3k2v_A Putative D-arabinose 5- 98.8 5E-09 1.7E-13 79.6 5.7 69 68-139 74-148 (149)
95 1pvm_A Conserved hypothetical 98.8 6.2E-09 2.1E-13 82.0 6.2 72 68-141 53-131 (184)
96 2uv4_A 5'-AMP-activated protei 98.8 6.3E-09 2.2E-13 79.3 5.9 72 68-141 65-149 (152)
97 4avf_A Inosine-5'-monophosphat 98.8 5.4E-10 1.8E-14 102.2 -0.2 102 83-189 88-206 (490)
98 2oux_A Magnesium transporter; 98.8 6.3E-09 2.2E-13 88.3 6.2 72 68-141 186-257 (286)
99 2yvy_A MGTE, Mg2+ transporter 98.8 5.5E-09 1.9E-13 88.1 5.7 72 68-141 184-255 (278)
100 2o16_A Acetoin utilization pro 98.8 1.1E-08 3.6E-13 78.9 6.3 71 68-141 49-133 (160)
101 3l2b_A Probable manganase-depe 98.8 4.7E-09 1.6E-13 86.3 4.3 58 81-140 183-241 (245)
102 2yzi_A Hypothetical protein PH 98.7 1.7E-08 5.9E-13 75.1 6.9 72 68-142 51-128 (138)
103 1o50_A CBS domain-containing p 98.7 9.4E-09 3.2E-13 78.7 5.5 72 68-142 60-152 (157)
104 2nyc_A Nuclear protein SNF4; b 98.7 8.9E-09 3E-13 76.9 5.1 75 68-142 55-140 (144)
105 2emq_A Hypothetical conserved 98.7 1E-08 3.5E-13 78.0 5.5 71 68-142 57-138 (157)
106 2j9l_A Chloride channel protei 98.7 1.1E-08 3.6E-13 79.9 5.7 60 80-142 105-164 (185)
107 3ctu_A CBS domain protein; str 98.7 4.7E-09 1.6E-13 80.1 3.4 71 68-142 61-141 (156)
108 4af0_A Inosine-5'-monophosphat 98.7 2E-09 6.8E-14 98.8 0.1 96 87-187 142-255 (556)
109 1yav_A Hypothetical protein BS 98.7 1.1E-08 3.8E-13 78.3 3.9 71 68-142 60-141 (159)
110 2pfi_A Chloride channel protei 98.6 1.7E-08 5.8E-13 77.0 4.3 72 68-142 59-146 (164)
111 3ocm_A Putative membrane prote 98.6 1.9E-08 6.5E-13 79.2 4.5 85 51-142 69-156 (173)
112 2zy9_A Mg2+ transporter MGTE; 98.6 2.7E-08 9.3E-13 90.4 5.8 84 51-140 191-274 (473)
113 1jcn_A Inosine monophosphate d 98.6 1.9E-09 6.6E-14 98.7 -2.5 102 83-186 108-229 (514)
114 4af0_A Inosine-5'-monophosphat 98.6 1E-08 3.6E-13 94.1 0.8 90 49-141 167-256 (556)
115 2cu0_A Inosine-5'-monophosphat 98.5 1.4E-08 4.7E-13 92.5 0.1 98 84-188 94-206 (486)
116 3org_A CMCLC; transporter, tra 98.5 1.2E-07 4.1E-12 88.9 6.1 54 85-141 570-623 (632)
117 3usb_A Inosine-5'-monophosphat 98.4 3.2E-07 1.1E-11 84.2 6.6 74 68-142 159-233 (511)
118 1me8_A Inosine-5'-monophosphat 98.3 5.6E-08 1.9E-12 89.0 0.0 75 68-142 144-220 (503)
119 2d4z_A Chloride channel protei 98.3 5.6E-07 1.9E-11 75.4 5.5 53 87-142 193-245 (250)
120 4avf_A Inosine-5'-monophosphat 98.3 7.9E-08 2.7E-12 87.8 0.0 74 68-141 131-205 (490)
121 4fxs_A Inosine-5'-monophosphat 98.3 1.2E-07 4.1E-12 86.8 -0.0 74 68-141 133-207 (496)
122 3pc3_A CG1753, isoform A; CBS, 98.2 1.1E-06 3.8E-11 80.6 6.0 86 51-143 416-511 (527)
123 1zfj_A Inosine monophosphate d 98.2 2.8E-06 9.6E-11 77.0 7.3 74 68-142 136-210 (491)
124 2cu0_A Inosine-5'-monophosphat 98.1 3.8E-07 1.3E-11 83.0 0.0 72 68-142 136-207 (486)
125 1vrd_A Inosine-5'-monophosphat 98.1 3.5E-07 1.2E-11 83.2 -0.3 74 68-141 139-213 (494)
126 1jcn_A Inosine monophosphate d 98.0 3.7E-07 1.3E-11 83.6 -2.8 74 68-141 155-231 (514)
127 3ghd_A A cystathionine beta-sy 90.1 0.24 8.1E-06 32.6 3.2 21 165-185 24-44 (70)
128 3fio_A A cystathionine beta-sy 84.4 0.84 2.9E-05 28.7 3.2 23 165-187 24-46 (70)
129 1tif_A IF3-N, translation init 64.0 8.4 0.00029 26.1 3.9 31 116-146 13-43 (78)
130 1svj_A Potassium-transporting 44.3 18 0.00062 27.3 3.4 35 104-139 121-155 (156)
131 1p0z_A Sensor kinase CITA; tra 40.5 20 0.0007 25.5 3.0 20 118-137 105-124 (131)
132 3by8_A Sensor protein DCUS; hi 39.6 21 0.0007 25.9 2.9 21 118-138 110-130 (142)
133 2qkp_A Uncharacterized protein 35.7 21 0.00071 26.3 2.4 18 116-133 108-125 (151)
134 3tjo_A Serine protease HTRA1; 34.2 22 0.00074 28.2 2.5 21 115-135 187-207 (231)
135 2w5e_A Putative serine proteas 32.8 25 0.00084 26.6 2.5 23 112-134 122-144 (163)
136 3lgi_A Protease DEGS; stress-s 32.3 23 0.00077 28.1 2.3 21 114-134 173-193 (237)
137 3k6y_A Serine protease, possib 31.0 26 0.0009 27.6 2.5 22 114-135 180-201 (237)
138 2as9_A Serine protease; trypsi 30.7 25 0.00084 27.2 2.2 22 114-135 155-176 (210)
139 2w7s_A Serine protease SPLA; h 29.6 29 0.001 26.2 2.5 22 114-135 151-172 (200)
140 3sti_A Protease DEGQ; serine p 29.5 29 0.00098 28.0 2.5 21 114-134 184-204 (245)
141 3fan_A Non-structural protein; 29.3 30 0.001 27.8 2.4 26 114-139 124-149 (213)
142 2vid_A Serine protease SPLB; h 28.3 32 0.0011 25.9 2.5 21 115-135 155-175 (204)
143 1qtf_A Exfoliative toxin B; se 25.9 37 0.0013 26.9 2.5 22 114-135 183-204 (246)
144 4e0a_A BH1408 protein; structu 24.0 1.1E+02 0.0038 20.7 4.6 36 101-136 39-74 (164)
145 1agj_A Epidermolytic toxin A; 23.9 44 0.0015 26.2 2.6 22 114-135 192-213 (242)
146 1h75_A Glutaredoxin-like prote 23.9 38 0.0013 21.2 1.8 34 107-140 39-72 (81)
147 3t9y_A Acetyltransferase, GNAT 23.7 1.2E+02 0.004 20.3 4.7 24 113-136 47-70 (150)
148 3ha9_A Uncharacterized thiored 23.3 1.8E+02 0.0062 20.4 5.8 25 115-139 130-157 (165)
149 3mgd_A Predicted acetyltransfe 23.1 1.3E+02 0.0045 20.2 4.9 23 113-135 47-69 (157)
150 1r7h_A NRDH-redoxin; thioredox 22.8 46 0.0016 20.2 2.1 33 107-139 39-71 (75)
151 1l1j_A Heat shock protease HTR 22.4 44 0.0015 26.6 2.3 22 114-135 180-201 (239)
152 2dxq_A AGR_C_4057P, acetyltran 21.8 1.4E+02 0.0049 20.5 4.9 27 109-135 43-69 (150)
153 3num_A Serine protease HTRA1; 21.7 51 0.0017 27.5 2.6 20 115-134 170-189 (332)
154 3ka5_A Ribosome-associated pro 21.2 1.4E+02 0.0049 19.2 4.2 35 100-134 11-45 (65)
155 1qst_A TGCN5 histone acetyl tr 21.2 1.3E+02 0.0044 20.9 4.6 23 113-135 43-65 (160)
156 1bo4_A Protein (serratia marce 21.1 1.4E+02 0.0048 20.4 4.7 32 105-136 64-95 (168)
157 2eui_A Probable acetyltransfer 20.6 1.6E+02 0.0054 19.5 4.8 21 115-135 45-67 (153)
158 1lcy_A HTRA2 serine protease; 20.6 55 0.0019 27.2 2.6 22 114-135 170-191 (325)
159 3k2t_A LMO2511 protein; lister 20.1 1.4E+02 0.0049 18.5 3.9 34 100-133 11-44 (57)
No 1
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.66 E-value=1e-16 Score=125.76 Aligned_cols=103 Identities=19% Similarity=0.249 Sum_probs=83.6
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh----------------
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI---------------- 143 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~---------------- 143 (203)
+.+++|+|+|++ +++++.+++++.+|++.|.+++++++||+|++|+++|+||.+||++....
T Consensus 15 l~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~ 92 (170)
T 4esy_A 15 IRQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPA 92 (170)
T ss_dssp HHTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCH
T ss_pred HcCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccch
Confidence 467899999998 89999999999999999999999999999999999999999999865321
Q ss_pred ---------cCCCccccCccCCccc---------hHHHH-----hhhceeeCCcEEEEEehhhH
Q 028824 144 ---------SGSGRADNSMFPEVDS---------TWKVC-----EKCLSFENYICLGSLSLKFL 184 (203)
Q Consensus 144 ---------~~~~~v~~~m~~~v~~---------~~~~~-----~~llv~~~g~lvGiVt~~DI 184 (203)
.....+.++|.+++.. ..+.+ .+++|.++|+++|+||..|+
T Consensus 93 ~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Di 156 (170)
T 4esy_A 93 PEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDL 156 (170)
T ss_dssp HHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHH
T ss_pred hhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHH
Confidence 1123466777765431 22222 45778889999999999999
No 2
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.63 E-value=1.6e-15 Score=118.32 Aligned_cols=111 Identities=18% Similarity=0.135 Sum_probs=86.0
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc-------CCCccccCcc
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS-------GSGRADNSMF 154 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~-------~~~~v~~~m~ 154 (203)
..+++++|+++.++.++.+++++.+|+++|.+++++++||+|++|+++|+||.+|++++.... ....+.++|.
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~ 93 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTK 93 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCB
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhc
Confidence 457899999988999999999999999999999999999999889999999999998764321 3456778887
Q ss_pred CCccc---------hHHHH---hhhc-eeeCCcEEEEEehhhHHHHHHHHh
Q 028824 155 PEVDS---------TWKVC---EKCL-SFENYICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 155 ~~v~~---------~~~~~---~~ll-v~~~g~lvGiVt~~DI~~~L~a~~ 192 (203)
+++.. ..+.+ ..++ ++++|+++|+||.+|++..+....
T Consensus 94 ~~~~~v~~~~~l~~~~~~m~~~~~lpVVd~~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 94 TDVAVVSPDFTITEVLHKLVDESFLPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp CSCCCBCTTCCHHHHHHHTTTSSEEEEECTTSBEEEEEEHHHHHHHHHHHS
T ss_pred CCceecccccHHHHHHHHHHHcCCeEEEecCCEEEEEEEHHHHHHHHHHHh
Confidence 75532 12222 1233 457899999999999966655544
No 3
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.59 E-value=8.1e-15 Score=111.87 Aligned_cols=110 Identities=13% Similarity=0.163 Sum_probs=87.0
Q ss_pred CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchhhcCCCccccCccCC
Q 028824 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (203)
Q Consensus 78 ~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~ 156 (203)
..+...+|+++|+++.++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|++++........+.++| .+
T Consensus 18 ~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~~m-~~ 96 (148)
T 3lv9_A 18 FEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENKIELEEIL-RD 96 (148)
T ss_dssp CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSCCCGGGTC-BC
T ss_pred hccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCCCccHHHhc-CC
Confidence 346788999999976679999999999999999999999999999987 8999999999999875443356788888 43
Q ss_pred cc---------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHH
Q 028824 157 VD---------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 157 v~---------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L 188 (203)
+. .....+ ..+++. ++|+++|+||..|++..+
T Consensus 97 ~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l 143 (148)
T 3lv9_A 97 IIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEI 143 (148)
T ss_dssp CEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHH
T ss_pred CeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 32 122222 335554 469999999999995544
No 4
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.58 E-value=9.2e-15 Score=109.39 Aligned_cols=107 Identities=18% Similarity=0.233 Sum_probs=81.9
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchhhcCCCccccCccCCcc-
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEVD- 158 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~v~- 158 (203)
.+.+|+++|++..++.++++++++.+|++.|.+++++++||+|++ |+++|+||.+|++++.. .+...+.++|.+...
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~-~~~~~v~~~m~~~~~v 81 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML-EPALDIRSLVRPAVFI 81 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT-CTTSCGGGGCBCCCEE
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc-cCCcCHHHHhCCCeEe
Confidence 567999999953378999999999999999999999999999985 89999999999997654 244567777765321
Q ss_pred -------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHH
Q 028824 159 -------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 159 -------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L 188 (203)
...+.+ ..+++. ++|+++|+||.+|++..+
T Consensus 82 ~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 82 PEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQI 124 (129)
T ss_dssp ETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 122223 234554 469999999999995544
No 5
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.55 E-value=2.3e-14 Score=112.67 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=82.7
Q ss_pred CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchhhcCCCccccCccCC
Q 028824 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (203)
Q Consensus 78 ~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~ 156 (203)
..+...+|+++|+++.+++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+||+++........+.++| .+
T Consensus 37 ~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~ 115 (172)
T 3lhh_A 37 FRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KN 115 (172)
T ss_dssp ------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BC
T ss_pred hccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cC
Confidence 346778999999943378999999999999999999999999999987 9999999999999876544456788888 44
Q ss_pred cc---------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHH
Q 028824 157 VD---------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 157 v~---------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L 188 (203)
+. .....+ ..+++. ++|+++|+||..|++..+
T Consensus 116 ~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 116 CNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDAL 162 (172)
T ss_dssp CEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred CeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHH
Confidence 32 122222 335554 469999999999994443
No 6
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.55 E-value=2.5e-14 Score=109.90 Aligned_cols=121 Identities=17% Similarity=0.128 Sum_probs=88.8
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc-------CCCcccc
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS-------GSGRADN 151 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~-------~~~~v~~ 151 (203)
.+...+++++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||++..... ....+.+
T Consensus 11 ~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~ 90 (156)
T 3ctu_A 11 TFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVH 90 (156)
T ss_dssp HHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGG
T ss_pred HHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHH
Confidence 345678999999544899999999999999999999999999999899999999999999765332 1456778
Q ss_pred CccCCccc---------hHHHH---hhhceee-CCcEEEEEehhhHHHHHHHHhccccccc
Q 028824 152 SMFPEVDS---------TWKVC---EKCLSFE-NYICLGSLSLKFLTFLLIFVNGLKAQNF 199 (203)
Q Consensus 152 ~m~~~v~~---------~~~~~---~~llv~~-~g~lvGiVt~~DI~~~L~a~~~l~~~~~ 199 (203)
+|.+++.. ....+ ..+++.+ +|+++|+|+..|++..+....+-....|
T Consensus 91 ~m~~~~~~v~~~~~l~~a~~~~~~~~~lpVvd~~g~~~Giit~~dil~~l~~~~~~~~~~~ 151 (156)
T 3ctu_A 91 MTKTDVAVVSPDFTITEVLHKLVDESFLPVVDAEGIFQGIITRKSILKAVNALLHDFSKEY 151 (156)
T ss_dssp GCBCSCCCBCSSCCHHHHHHHTTTSSEEEEECTTSBEEEEEETTHHHHHHHHHSCC-----
T ss_pred hccCCceeeCCCCcHHHHHHHHHHcCeEEEEcCCCeEEEEEEHHHHHHHHHHHHHhhchhh
Confidence 88664421 12222 2355554 7999999999999777766554433333
No 7
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.54 E-value=9e-15 Score=110.52 Aligned_cols=107 Identities=19% Similarity=0.216 Sum_probs=82.0
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchh--hcCCCccccCccCCcc
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDS--ISGSGRADNSMFPEVD 158 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~--~~~~~~v~~~m~~~v~ 158 (203)
+.+|+++|+++.++.++.+++++.+|++.|.+++++++||+|++ |+++|+||.+||+++.. ......+.++|.+...
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 81 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRPATF 81 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBCCCE
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCCCeE
Confidence 56899999954378999999999999999999999999999987 89999999999998754 2234467788866321
Q ss_pred --------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHH
Q 028824 159 --------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 159 --------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L 188 (203)
.....+ ..+++. ++|+++|+||.+|++..+
T Consensus 82 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 82 VPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQI 125 (136)
T ss_dssp EETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC
T ss_pred ECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 122222 335554 579999999999994443
No 8
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.54 E-value=2.5e-14 Score=110.64 Aligned_cols=117 Identities=20% Similarity=0.165 Sum_probs=89.4
Q ss_pred cCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh---cCCCccccCc
Q 028824 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI---SGSGRADNSM 153 (203)
Q Consensus 77 ~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~---~~~~~v~~~m 153 (203)
...+..++|+++|++ . +++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++... .....+.++|
T Consensus 11 ~~~l~~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m 87 (159)
T 3fv6_A 11 ADKLKKLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIM 87 (159)
T ss_dssp HHHHTTCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTS
T ss_pred HHHHhhCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHH
Confidence 455678899999987 4 599999999999999999999999999988999999999999975422 2345678888
Q ss_pred cC--Cccc---------hHHHH-----hhhcee-eCC---cEEEEEehhhHHHHHHHHhcccc
Q 028824 154 FP--EVDS---------TWKVC-----EKCLSF-ENY---ICLGSLSLKFLTFLLIFVNGLKA 196 (203)
Q Consensus 154 ~~--~v~~---------~~~~~-----~~llv~-~~g---~lvGiVt~~DI~~~L~a~~~l~~ 196 (203)
.+ ++.. ..+.+ ..++|. ++| +++|+|+..|++..+..+.....
T Consensus 88 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~~~~ 150 (159)
T 3fv6_A 88 TRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSENEI 150 (159)
T ss_dssp EETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHTTCC
T ss_pred cCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhhcch
Confidence 75 4321 12222 335554 456 99999999999777766655433
No 9
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.54 E-value=6.2e-14 Score=104.41 Aligned_cols=106 Identities=17% Similarity=0.092 Sum_probs=83.8
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcCC--CccccCccCCcc
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS--GRADNSMFPEVD 158 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~--~~v~~~m~~~v~ 158 (203)
..++++++|++ ++.++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|++++...... ..+.++|.+++.
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVR 79 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBCCC
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCCCc
Confidence 56799999999 8999999999999999999999999999998 999999999999976543221 457777766432
Q ss_pred ---------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHHH
Q 028824 159 ---------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 159 ---------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~ 189 (203)
...+.+ ..+++. ++|+++|+|+..|++..+.
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 223333 335555 5899999999999955543
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.54 E-value=7.3e-15 Score=109.92 Aligned_cols=109 Identities=19% Similarity=0.218 Sum_probs=80.7
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchhhc-CCCccccCccCCc
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSIS-GSGRADNSMFPEV 157 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~~~-~~~~v~~~m~~~v 157 (203)
+...+|+++|++..+++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|++++.... ....+.++|.+..
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m~~~~ 82 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVMRPIQ 82 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHSEECC
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHhcCCc
Confidence 5678999999964467799999999999999999999999999987 8999999999999875432 3456677775422
Q ss_pred c--------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHH
Q 028824 158 D--------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 158 ~--------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L 188 (203)
. ...+.+ ..+++. ++|+++|+||..|++..+
T Consensus 83 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 83 VVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp EEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred CcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 1 122222 335544 579999999999995443
No 11
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.54 E-value=3.3e-14 Score=112.53 Aligned_cols=109 Identities=16% Similarity=0.068 Sum_probs=82.4
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchhhcCCCccccCccCCc
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~v 157 (203)
.+...+|+++|+++.+++++++++++.+|++.|.+++++++||+|++ |+++|+||.+||+++........+. ++.+..
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~~~~v~-~~~~~~ 110 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVRRN-RLRDPI 110 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSSCCGG-GSBCCC
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCCcchhH-hcCCCe
Confidence 45788999999864478999999999999999999999999999876 8999999999999775433344555 443322
Q ss_pred c--------chHHHH-----hhhce-eeCCcEEEEEehhhHHHHH
Q 028824 158 D--------STWKVC-----EKCLS-FENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 158 ~--------~~~~~~-----~~llv-~~~g~lvGiVt~~DI~~~L 188 (203)
. .....+ ..++| +++|+++|+||..|++..+
T Consensus 111 ~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l 155 (173)
T 3ocm_A 111 IVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAI 155 (173)
T ss_dssp EECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHH
Confidence 1 122222 23455 4579999999999994443
No 12
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=4.6e-14 Score=109.80 Aligned_cols=111 Identities=20% Similarity=0.154 Sum_probs=87.9
Q ss_pred cCCCCccccccccccC-CCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh----cCCCcccc
Q 028824 77 APSSGVYTVGDFMTTK-EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI----SGSGRADN 151 (203)
Q Consensus 77 ~~~~~~~~V~diM~~~-~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~----~~~~~v~~ 151 (203)
..++..++|+++|+++ .++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++... .....+.+
T Consensus 18 ~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 97 (165)
T 3fhm_A 18 YFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSV 97 (165)
T ss_dssp CCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGG
T ss_pred hHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHH
Confidence 4667889999999962 269999999999999999999999999999999999999999999976432 23456788
Q ss_pred CccCCccc---------hHHHH-----hhhceeeCCcEEEEEehhhHHHH
Q 028824 152 SMFPEVDS---------TWKVC-----EKCLSFENYICLGSLSLKFLTFL 187 (203)
Q Consensus 152 ~m~~~v~~---------~~~~~-----~~llv~~~g~lvGiVt~~DI~~~ 187 (203)
+|.+++.. ..+.+ ..++|.++|+++|+|+..|++..
T Consensus 98 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~ 147 (165)
T 3fhm_A 98 AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKA 147 (165)
T ss_dssp TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 88765421 12222 34667667999999999999443
No 13
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.53 E-value=2.7e-14 Score=110.17 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=87.5
Q ss_pred CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh--------cCCCcc
Q 028824 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI--------SGSGRA 149 (203)
Q Consensus 78 ~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~--------~~~~~v 149 (203)
..+...+|+++|+++.++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||++.... .....+
T Consensus 9 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v 88 (159)
T 1yav_A 9 DQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITV 88 (159)
T ss_dssp --CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBH
T ss_pred HHHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCH
Confidence 445678999999864468999999999999999999999999999988999999999999976432 234466
Q ss_pred ccCccCCccc---------hHHHH---hhhceee-CCcEEEEEehhhHHHHHHHHhcc
Q 028824 150 DNSMFPEVDS---------TWKVC---EKCLSFE-NYICLGSLSLKFLTFLLIFVNGL 194 (203)
Q Consensus 150 ~~~m~~~v~~---------~~~~~---~~llv~~-~g~lvGiVt~~DI~~~L~a~~~l 194 (203)
.++|.+++.. ..+.+ ..+++.+ +|+++|+|+..|++..+......
T Consensus 89 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 89 EEVMLTDIPRLHINDPIMKGFGMVINNGFVCVENDEQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp HHHSBCSCCEEETTSBHHHHHHHTTTCSEEEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred HHhcCCCCceEcCCCCHHHHHHHHHhCCEEEEEeCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 7777654421 11222 1245554 79999999999997777655443
No 14
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.53 E-value=2.9e-14 Score=110.55 Aligned_cols=110 Identities=22% Similarity=0.219 Sum_probs=86.4
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh-----------cCCCcc
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI-----------SGSGRA 149 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~-----------~~~~~v 149 (203)
..++|+++|++ +++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++... .....+
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v 80 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPL 80 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBH
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCH
Confidence 45789999998 89999999999999999999999999999988999999999999976431 233456
Q ss_pred ccCccCCcc---------chHHHH-----hhhceeeCCcEEEEEehhhHHHHHHHHh
Q 028824 150 DNSMFPEVD---------STWKVC-----EKCLSFENYICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 150 ~~~m~~~v~---------~~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L~a~~ 192 (203)
.++|.+++. .....+ ..++|.++|+++|+|+..|++..+....
T Consensus 81 ~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 81 FEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp HHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHHHHHHH
T ss_pred HHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHHHh
Confidence 677765432 122222 3466767799999999999987766544
No 15
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.52 E-value=2.2e-14 Score=106.87 Aligned_cols=106 Identities=23% Similarity=0.287 Sum_probs=81.0
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchhh-cCCCccccCccCCcc-
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSI-SGSGRADNSMFPEVD- 158 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~~-~~~~~v~~~m~~~v~- 158 (203)
+++|+++|++..++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|++++... .....+.++|.+...
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~~~~v 81 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVV 81 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBCCCEE
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCCCeEE
Confidence 46899999963259999999999999999999999999999987 899999999999976432 234466777755321
Q ss_pred -------chHHHH-----hhhcee-eCCcEEEEEehhhHHHH
Q 028824 159 -------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFL 187 (203)
Q Consensus 159 -------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~ 187 (203)
.....+ ..+++. ++|+++|+||..|++..
T Consensus 82 ~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~ 123 (127)
T 3nqr_A 82 PESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILEL 123 (127)
T ss_dssp ETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 122222 235554 57999999999999443
No 16
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.52 E-value=4.6e-14 Score=103.63 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=81.6
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCccCCccc---
Q 028824 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS--- 159 (203)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~v~~--- 159 (203)
++|+++|++ ++.++++++++.+|++.|.+++++.+||+|++|+++|+|+.+|++++... +...+.++|.+++..
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~-~~~~v~~~~~~~~~~v~~ 77 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ-NKKTIEEIMTRNVITAHE 77 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT-TCCBGGGTSBSSCCCEET
T ss_pred CchHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh-cccCHHHHhcCCCeEECC
Confidence 368999998 89999999999999999999999999999989999999999999976443 234677888665421
Q ss_pred ------hHHHH-----hhhceee-CCcEEEEEehhhHHHHH
Q 028824 160 ------TWKVC-----EKCLSFE-NYICLGSLSLKFLTFLL 188 (203)
Q Consensus 160 ------~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L 188 (203)
..+.+ ..+++.+ +|+++|+|+..|++..+
T Consensus 78 ~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 78 DEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHh
Confidence 12222 3355554 59999999999995443
No 17
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.52 E-value=1.6e-14 Score=108.53 Aligned_cols=106 Identities=9% Similarity=-0.037 Sum_probs=79.4
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeC-CCeEEEEEehHHHhhchhhcC---CCccccCccCCcc
Q 028824 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD-DWKLVGLVSDYDLLALDSISG---SGRADNSMFPEVD 158 (203)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~-~g~lvGiVt~~Dll~~~~~~~---~~~v~~~m~~~v~ 158 (203)
++|+++|+++.+++++++++++.+|++.|.+++++++||+|+ +|+++|+||.+|++++..... ...+.++|.+...
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 81 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIYF 81 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHSBCCCE
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhccCCeE
Confidence 589999986447899999999999999999999999999975 589999999999998754322 1235566643221
Q ss_pred --------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHH
Q 028824 159 --------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 159 --------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L 188 (203)
...+.+ ..+++. ++|+++|+||.+|++..+
T Consensus 82 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 82 VPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEI 125 (130)
T ss_dssp EETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred eCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHH
Confidence 122222 235554 579999999999995444
No 18
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.52 E-value=1.6e-13 Score=102.95 Aligned_cols=109 Identities=22% Similarity=0.209 Sum_probs=84.5
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhh-chhh--cCCCccccCccC
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSI--SGSGRADNSMFP 155 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~-~~~~--~~~~~v~~~m~~ 155 (203)
.+...+|+++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++ +... .....+.++|.+
T Consensus 3 ~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 80 (138)
T 2yzi_A 3 MDMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTR 80 (138)
T ss_dssp CCTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBC
T ss_pred chhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhC
Confidence 4577899999998 8999999999999999999999999999998899999999999973 3322 234567788876
Q ss_pred Cccc---------hHHHH-----hhhceeeCCcEEEEEehhhHHHHHH
Q 028824 156 EVDS---------TWKVC-----EKCLSFENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 156 ~v~~---------~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L~ 189 (203)
++.. ....+ ..++++++|+++|+|+..|++..+.
T Consensus 81 ~~~~v~~~~~l~~~~~~m~~~~~~~lVvd~~g~~~Giit~~dil~~~~ 128 (138)
T 2yzi_A 81 NLITANVNTPLGEVLRKMAEHRIKHILIEEEGKIVGIFTLSDLLEASR 128 (138)
T ss_dssp SCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHhcCCCEEEECCCCCEEEEEEHHHHHHHHH
Confidence 5421 12222 3353445899999999999954443
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.52 E-value=3.1e-14 Score=108.51 Aligned_cols=113 Identities=20% Similarity=0.186 Sum_probs=87.3
Q ss_pred CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh--------cCCCcc
Q 028824 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI--------SGSGRA 149 (203)
Q Consensus 78 ~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~--------~~~~~v 149 (203)
..+..++|+++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++... .....+
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v 89 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKV 89 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBG
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCH
Confidence 345788999999953369999999999999999999999999999999999999999999976431 133467
Q ss_pred ccCccCCccc---------hHHHH---hhhceee-CCcEEEEEehhhHHHHHHH
Q 028824 150 DNSMFPEVDS---------TWKVC---EKCLSFE-NYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 150 ~~~m~~~v~~---------~~~~~---~~llv~~-~g~lvGiVt~~DI~~~L~a 190 (203)
.++|.+++.. ..+.+ ..+++.+ +|+++|+|+..|++..+..
T Consensus 90 ~~~m~~~~~~v~~~~~l~~a~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 90 EQVMKQDIPVLKLEDSFAKALEMTIDHPFICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGTCBSSCCEEETTCBHHHHHHHHHHCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HHHhcCCCceeCCCCCHHHHHHHHHhCCEEEEECCCCcEEEEEEHHHHHHHHHH
Confidence 7888765421 12222 2245554 8999999999999666654
No 20
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.51 E-value=1.5e-13 Score=102.47 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=84.3
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc--CCCccccCccCCcc
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--GSGRADNSMFPEVD 158 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~--~~~~v~~~m~~~v~ 158 (203)
...+|+++|++ ++.++.+++++.+|++.|.+++++.+||+| +|+++|+|+.+|+++..... ....+.++|.+++.
T Consensus 2 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 2 EEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFMTASLI 78 (133)
T ss_dssp CCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECCC
T ss_pred CcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCCE
Confidence 56799999998 899999999999999999999999999999 89999999999998764332 24567788865432
Q ss_pred c---------hHHHH-----hhhcee-eCCcEEEEEehhhHHHHHHHH
Q 028824 159 S---------TWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLIFV 191 (203)
Q Consensus 159 ~---------~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~a~ 191 (203)
. ..+.+ ..+++. ++|+++|+|+..|++..+...
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 1 22222 235555 479999999999996665543
No 21
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.50 E-value=2.7e-14 Score=109.83 Aligned_cols=110 Identities=20% Similarity=0.280 Sum_probs=85.4
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEE-eC-CCeEEEEEehHHHhhchhhcCCCccccCccCC
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVI-DD-DWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVv-d~-~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~ 156 (203)
.+...+|+++|+++.+++++++++++.+|++.|.+++++.+||+ |+ +|+++|+||.+||+++........+.++| .+
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~~~~v~~~m-~~ 94 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDDKAKISTIM-RD 94 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHTTSBGGGTC-BC
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCCCCcHHHHh-CC
Confidence 34678999999964478999999999999999999999999999 64 48999999999999875544466788888 44
Q ss_pred cc---------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHHH
Q 028824 157 VD---------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 157 v~---------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~ 189 (203)
+. .....+ ..+++. ++|+++|+||..|++..+.
T Consensus 95 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 95 IVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp CEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHH
T ss_pred CeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 32 122222 335554 4699999999999954443
No 22
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.50 E-value=1.4e-13 Score=105.39 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=86.0
Q ss_pred CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh--------cCCCcc
Q 028824 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI--------SGSGRA 149 (203)
Q Consensus 78 ~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~--------~~~~~v 149 (203)
..+..++|+++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.... .....+
T Consensus 6 ~~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v 85 (157)
T 2emq_A 6 NEFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKV 85 (157)
T ss_dssp ----CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBG
T ss_pred hhHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcH
Confidence 345778999999853368899999999999999999999999999988999999999999976432 134567
Q ss_pred ccCccCCccc---------hHHHH---hhhcee-eCCcEEEEEehhhHHHHHHHHh
Q 028824 150 DNSMFPEVDS---------TWKVC---EKCLSF-ENYICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 150 ~~~m~~~v~~---------~~~~~---~~llv~-~~g~lvGiVt~~DI~~~L~a~~ 192 (203)
.++|.+++.. ....+ ..+++. ++|+++|+|+..|++..+....
T Consensus 86 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 86 EEVMNRNIPRLRLDDSLMKAVGLIVNHPFVCVENDDGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp GGTCBCCCCEEETTSBHHHHHHHHHHSSEEEEECSSSSEEEEEEHHHHHHHHHHTT
T ss_pred HHHhCCCCceecCCCcHHHHHHHHhhCCEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 7888765421 12222 124554 4799999999999977666543
No 23
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.50 E-value=9.4e-14 Score=105.20 Aligned_cols=109 Identities=55% Similarity=0.793 Sum_probs=82.1
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh----------------hc
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS----------------IS 144 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~----------------~~ 144 (203)
..++|+++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++... ..
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC----
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHh
Confidence 45799999998556899999999999999999999999999998899999999999986421 11
Q ss_pred CCCccccCccCCcc---------chHHHH-----hhhcee-eCCcEEEEEehhhHHHHHH
Q 028824 145 GSGRADNSMFPEVD---------STWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 145 ~~~~v~~~m~~~v~---------~~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~ 189 (203)
....+.++|.+++. ...+.+ ..+++. ++|+++|+|+..|++..+.
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 23456677766432 122222 235555 4799999999999944443
No 24
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.48 E-value=1.4e-13 Score=101.31 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=80.2
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc---CCCccccCccCCcc-
Q 028824 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS---GSGRADNSMFPEVD- 158 (203)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~---~~~~v~~~m~~~v~- 158 (203)
++|+++|++ ++.++.+++++.+|++.|.+++++.+||+| +|+++|+|+.+|+++..... ....+.++|.+++.
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~ 77 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVT 77 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGE
T ss_pred CCHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeE
Confidence 478999998 899999999999999999999999999999 89999999999999764332 24466777765432
Q ss_pred --------chHHHH-----hhhceeeCCcEEEEEehhhHHHHH
Q 028824 159 --------STWKVC-----EKCLSFENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 159 --------~~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L 188 (203)
...+.+ ..+++.++|+++|+|+..|++..+
T Consensus 78 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 78 ISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAK 120 (125)
T ss_dssp ECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHHH
Confidence 112222 346666669999999999995443
No 25
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.47 E-value=1e-13 Score=108.13 Aligned_cols=111 Identities=45% Similarity=0.686 Sum_probs=84.2
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh-------------------
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS------------------- 142 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~------------------- 142 (203)
.++|+++|+++.+++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4689999997556899999999999999999999999999999999999999999986421
Q ss_pred -----------hcCCCccccCccCCccc---------hHHHH-----hhhceee-CCcEEEEEehhhHHHHHHHHh
Q 028824 143 -----------ISGSGRADNSMFPEVDS---------TWKVC-----EKCLSFE-NYICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 143 -----------~~~~~~v~~~m~~~v~~---------~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L~a~~ 192 (203)
......+.++|.+.+.. ..+.+ ..++|.+ +|+++|+|+..|++..+....
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~ 158 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIK 158 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHh
Confidence 11234566777664321 22222 3355554 899999999999977665543
No 26
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.47 E-value=7.2e-14 Score=108.01 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=82.4
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCC-eEEEEEehHHHhhchhhcCCCccccCccCCc
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW-KLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g-~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~v 157 (203)
.+...+|+++|+++.+++++++++++.+|++.|.+++++.+||+|+++ +++|+||.+|++++........+.++|.+..
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im~~~~ 113 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNPEQFHLKSILRPAV 113 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHCBCCC
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHcCCCE
Confidence 457889999999754689999999999999999999999999999874 9999999999997643323445677776522
Q ss_pred c--------chHHHH-----hhhcee-eCCcEEEEEehhhH
Q 028824 158 D--------STWKVC-----EKCLSF-ENYICLGSLSLKFL 184 (203)
Q Consensus 158 ~--------~~~~~~-----~~llv~-~~g~lvGiVt~~DI 184 (203)
. .....+ ..+++. ++|+++|+||..|+
T Consensus 114 ~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Di 154 (156)
T 3oi8_A 114 FVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDI 154 (156)
T ss_dssp EEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHH
T ss_pred EECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHh
Confidence 1 122222 234554 57999999999998
No 27
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.46 E-value=3.4e-13 Score=101.80 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=83.7
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCC--eEEEEEehHHHhhchhhc--CCCccccCccCCc
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW--KLVGLVSDYDLLALDSIS--GSGRADNSMFPEV 157 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g--~lvGiVt~~Dll~~~~~~--~~~~v~~~m~~~v 157 (203)
.++|+++|++ ++.++.+++++.+|++.|.+++++.+||+|++| +++|+||.+|++++.... ....+.++|.+++
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~ 81 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPI 81 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCCC
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCCC
Confidence 3689999998 899999999999999999999999999999888 999999999999764321 2456777776543
Q ss_pred c-----c---hHHHH-----hhhcee-eCCcEEEEEehhhHHHHHHHHh
Q 028824 158 D-----S---TWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 158 ~-----~---~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~a~~ 192 (203)
. . ..+.+ ..+++. ++|+++|+|+..|++..+....
T Consensus 82 ~~v~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~ 130 (141)
T 2rih_A 82 TVLDTDPVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAILL 130 (141)
T ss_dssp EEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHHHH
T ss_pred eEEcCCCHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHHHH
Confidence 2 1 11222 235555 4799999999999966555433
No 28
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.46 E-value=2.3e-13 Score=106.78 Aligned_cols=113 Identities=22% Similarity=0.254 Sum_probs=85.9
Q ss_pred CCccccccccccCCC--eEEE--cCCCCHHHHHHHHHHCCCcEEEEE--eCCCeEEEEEehHHHhhchhh----------
Q 028824 80 SGVYTVGDFMTTKEE--LHVV--KPTTTVDEALEILVEKRITGFPVI--DDDWKLVGLVSDYDLLALDSI---------- 143 (203)
Q Consensus 80 ~~~~~V~diM~~~~~--~~~v--~~~~ti~ea~~~m~~~~~~~lPVv--d~~g~lvGiVt~~Dll~~~~~---------- 143 (203)
+...+|+++|++..+ ++++ .+++++.+|++.|.+++++.+||+ |++|+++|+||.+|+++....
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 467899999998211 7788 999999999999999999999999 778999999999999976432
Q ss_pred -----------------cCCCccccCccCCccc---------hHHHH-----hhhceeeCCcEEEEEehhhHHHHHHHHh
Q 028824 144 -----------------SGSGRADNSMFPEVDS---------TWKVC-----EKCLSFENYICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 144 -----------------~~~~~v~~~m~~~v~~---------~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L~a~~ 192 (203)
.....+.++|.+++.. ....+ ..++|.++|+++|+||..|++..+....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGiit~~dll~~l~~~~ 167 (185)
T 2j9l_A 88 TSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMA 167 (185)
T ss_dssp TCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHHHC
T ss_pred cceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEEEEHHHHHHHHHHhh
Confidence 1234577777654421 12222 4467777999999999999976665543
No 29
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.46 E-value=7e-13 Score=107.85 Aligned_cols=107 Identities=14% Similarity=0.161 Sum_probs=86.2
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHC---CCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCccC
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK---RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~---~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~ 155 (203)
.+.+.+|+++|++ +++++++++|+.+|++.|.++ +++.+||+|++|+++|+||.+||+... ....+.++|.+
T Consensus 50 ~~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~---~~~~v~~im~~ 124 (205)
T 3kxr_A 50 QYSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE---PHEPLISLLSE 124 (205)
T ss_dssp HSCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC---TTSBGGGGCCS
T ss_pred CCCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC---CcchHHHHhcC
Confidence 4567799999999 999999999999999999997 899999999999999999999998642 34568888876
Q ss_pred Cccc---------hHHHH-----hhhcee-eCCcEEEEEehhhHHHHHHH
Q 028824 156 EVDS---------TWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 156 ~v~~---------~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~a 190 (203)
++.. ....+ ..++|. ++|+++|+||..|++..+..
T Consensus 125 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 125 DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 5431 22233 234554 57999999999999877764
No 30
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.45 E-value=2.5e-13 Score=104.37 Aligned_cols=111 Identities=14% Similarity=0.192 Sum_probs=84.9
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeC--CCeEEEEEehHHHhhchhhc-------CCCccc
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLALDSIS-------GSGRAD 150 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~--~g~lvGiVt~~Dll~~~~~~-------~~~~v~ 150 (203)
...++|+++|++ ++.++.+++++.+|++.|.+++++.+||+|+ +|+++|+||.+||+++.... ....+.
T Consensus 10 ~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~ 87 (164)
T 2pfi_A 10 SHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQ 87 (164)
T ss_dssp CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHH
T ss_pred ccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhh
Confidence 457899999998 8999999999999999999999999999996 79999999999999764321 123455
Q ss_pred cCccCC------cc---------chHHHH-----hhhceeeCCcEEEEEehhhHHHHHHHHh
Q 028824 151 NSMFPE------VD---------STWKVC-----EKCLSFENYICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 151 ~~m~~~------v~---------~~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L~a~~ 192 (203)
++|... +. ...+.+ ..+++.++|+++|+||..|++..+....
T Consensus 88 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 88 DILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp HHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHHHHHH
T ss_pred hhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHhhh
Confidence 555543 11 122222 3466767899999999999977766544
No 31
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.45 E-value=1.1e-13 Score=103.24 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=80.7
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHh-hchhhc---CCCccccCccCC
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSIS---GSGRADNSMFPE 156 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll-~~~~~~---~~~~v~~~m~~~ 156 (203)
..++|+++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|++ ++.... ....+.++|.++
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDS 83 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTC
T ss_pred hhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCC
Confidence 45689999998 899999999999999999999999999999889999999999998 443322 234677777654
Q ss_pred ccc---------hHHHH-----hhhceeeCCcEEEEEehhhHHH
Q 028824 157 VDS---------TWKVC-----EKCLSFENYICLGSLSLKFLTF 186 (203)
Q Consensus 157 v~~---------~~~~~-----~~llv~~~g~lvGiVt~~DI~~ 186 (203)
+.. ..+.+ ..+++.++|+++|+|+..|++.
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil~ 127 (133)
T 1y5h_A 84 IYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIAR 127 (133)
T ss_dssp CCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred CEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHH
Confidence 321 22222 3466766799999999999943
No 32
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.45 E-value=4.9e-13 Score=100.05 Aligned_cols=103 Identities=18% Similarity=0.213 Sum_probs=80.7
Q ss_pred cccccccc---cCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhh-chhh---cCCCccccCccC
Q 028824 83 YTVGDFMT---TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSI---SGSGRADNSMFP 155 (203)
Q Consensus 83 ~~V~diM~---~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~-~~~~---~~~~~v~~~m~~ 155 (203)
.+|+++|+ + ++.++++++++.+|++.|.+++++.+||+| +|+++|+||.+|+++ .... .....+.++|.+
T Consensus 6 ~~v~~im~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 82 (135)
T 2rc3_A 6 KTVKHLLQEKGH--TVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTR 82 (135)
T ss_dssp CBHHHHHHHHCC--CCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBC
T ss_pred eeHHHHHhcCCC--CcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccC
Confidence 38999999 6 899999999999999999999999999999 899999999999985 3221 234467788876
Q ss_pred Cccc---------hHHHH-----hhhceeeCCcEEEEEehhhHHHHH
Q 028824 156 EVDS---------TWKVC-----EKCLSFENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 156 ~v~~---------~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L 188 (203)
++.. ..+.+ ..+++.++|+++|+|+..|++..+
T Consensus 83 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 83 QVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDA 129 (135)
T ss_dssp SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHHH
Confidence 5421 12222 346666689999999999994443
No 33
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.45 E-value=2.5e-13 Score=101.72 Aligned_cols=109 Identities=24% Similarity=0.254 Sum_probs=83.5
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHH-hhchhh--cCCCccccCccC
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSI--SGSGRADNSMFP 155 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dl-l~~~~~--~~~~~v~~~m~~ 155 (203)
.+...+++++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+ ++.... .....+.++|.+
T Consensus 4 ~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 81 (138)
T 2p9m_A 4 TLKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTK 81 (138)
T ss_dssp -CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCS
T ss_pred ccccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCC
Confidence 3567899999998 89999999999999999999999999999988999999999999 765332 223456677765
Q ss_pred Ccc---------chHHHH----------hhhceee-CCcEEEEEehhhHHHHHH
Q 028824 156 EVD---------STWKVC----------EKCLSFE-NYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 156 ~v~---------~~~~~~----------~~llv~~-~g~lvGiVt~~DI~~~L~ 189 (203)
++. .....+ ..+++.+ +|+++|+|+..|++..+.
T Consensus 82 ~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 82 DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 432 112222 2355554 899999999999955543
No 34
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.44 E-value=3.5e-13 Score=113.37 Aligned_cols=59 Identities=24% Similarity=0.420 Sum_probs=54.4
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC--CeEEEEEehHHHhhc
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD--WKLVGLVSDYDLLAL 140 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~--g~lvGiVt~~Dll~~ 140 (203)
...++|+|+|++ +++++.+++++.+|+++|.++++++|||||++ |+++|+|+..||+++
T Consensus 10 ~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~ 70 (250)
T 2d4z_A 10 KYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGL 70 (250)
T ss_dssp CSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHH
T ss_pred cCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHH
Confidence 357799999999 99999999999999999999999999999864 689999999999965
No 35
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.44 E-value=3.4e-13 Score=103.00 Aligned_cols=104 Identities=21% Similarity=0.236 Sum_probs=82.3
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc---CCCccccCccCCcc
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS---GSGRADNSMFPEVD 158 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~---~~~~v~~~m~~~v~ 158 (203)
.++|+++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++.... ....+.++|.+.+.
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 106 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGI 106 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESCC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCCe
Confidence 369999998754689999999999999999999999999999899999999999999764332 23456777765432
Q ss_pred ---------chHHHH-----hhhceeeCCcEEEEEehhhHH
Q 028824 159 ---------STWKVC-----EKCLSFENYICLGSLSLKFLT 185 (203)
Q Consensus 159 ---------~~~~~~-----~~llv~~~g~lvGiVt~~DI~ 185 (203)
...+.+ ..++|.++++++|+|+..|++
T Consensus 107 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil 147 (149)
T 3k2v_A 107 RIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLL 147 (149)
T ss_dssp EECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHT
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhh
Confidence 112222 346777777999999999993
No 36
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.43 E-value=5.9e-13 Score=102.53 Aligned_cols=108 Identities=20% Similarity=0.231 Sum_probs=83.8
Q ss_pred CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcE-EEEEeCCCeEEEEEehHHHhhchh--------------
Q 028824 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG-FPVIDDDWKLVGLVSDYDLLALDS-------------- 142 (203)
Q Consensus 78 ~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~-lPVvd~~g~lvGiVt~~Dll~~~~-------------- 142 (203)
..+...+|+++|++ ++.++.+++++.+|++.|.+++++. +||+|++ +++|+||.+||+++..
T Consensus 11 ~~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (157)
T 1o50_A 11 HHMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIR 87 (157)
T ss_dssp TTCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC------
T ss_pred hhhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHH
Confidence 44577899999998 8999999999999999999999999 9999987 9999999999997532
Q ss_pred ----hcCCCccccCccCCccc---------hHHHH-----hhhceee-CCcEEEEEehhhHHHHHH
Q 028824 143 ----ISGSGRADNSMFPEVDS---------TWKVC-----EKCLSFE-NYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 143 ----~~~~~~v~~~m~~~v~~---------~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L~ 189 (203)
......+.++|.+ +.. ..+.+ ..+++.+ +|+++|+|+..|++..+.
T Consensus 88 ~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 88 SSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp -CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 1223456677766 421 12222 3456655 899999999999955543
No 37
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.41 E-value=5.6e-13 Score=105.50 Aligned_cols=105 Identities=23% Similarity=0.243 Sum_probs=82.7
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh----cCCCccccCccCCc
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI----SGSGRADNSMFPEV 157 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~----~~~~~v~~~m~~~v 157 (203)
.++|+++|++ +++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+||++.... .....+.++|.+++
T Consensus 8 ~~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 8 FMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CCBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred ccCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 3789999998 89999999999999999999999999999988999999999999975432 23346778887654
Q ss_pred cc---------hHHHH-----hhhceee-CCcEEEEEehhhHHHHH
Q 028824 158 DS---------TWKVC-----EKCLSFE-NYICLGSLSLKFLTFLL 188 (203)
Q Consensus 158 ~~---------~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L 188 (203)
.. ....+ ..++|.+ +|+++|+|+..|++..+
T Consensus 86 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYL 131 (184)
T ss_dssp CEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTS
T ss_pred cEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 21 22222 3355555 49999999999996544
No 38
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.38 E-value=2e-12 Score=99.23 Aligned_cols=107 Identities=20% Similarity=0.247 Sum_probs=82.1
Q ss_pred cccccccccC----CCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc----CCCccccCcc
Q 028824 83 YTVGDFMTTK----EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS----GSGRADNSMF 154 (203)
Q Consensus 83 ~~V~diM~~~----~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~----~~~~v~~~m~ 154 (203)
.+|+|+|+++ .++.++.+++++.+|++.|.+++++.+||+| +|+++|+||.+|++++.... ....+.++|.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 85 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKATRVEEIMT 85 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSB
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcC
Confidence 5799999953 2679999999999999999999999999955 89999999999999764332 2446777776
Q ss_pred CCccc---------hHHHH-----hhhceeeCCcEEEEEehhhHHHHHHH
Q 028824 155 PEVDS---------TWKVC-----EKCLSFENYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 155 ~~v~~---------~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L~a 190 (203)
+++.. ..+.+ ..+++.++|+++|+|+..|++..+..
T Consensus 86 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 86 AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHT
T ss_pred CCCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHH
Confidence 64421 22222 34667679999999999999555543
No 39
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.36 E-value=2.3e-12 Score=98.66 Aligned_cols=108 Identities=22% Similarity=0.341 Sum_probs=81.5
Q ss_pred cCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc----CCCccccC
Q 028824 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS----GSGRADNS 152 (203)
Q Consensus 77 ~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~----~~~~v~~~ 152 (203)
...+..++|+++ + ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||++..... ....+.++
T Consensus 17 ~~~l~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~ 92 (152)
T 2uv4_A 17 SKSLEELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKA 92 (152)
T ss_dssp TSBHHHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGG
T ss_pred HhhHHHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHH
Confidence 344577889998 5 799999999999999999999999999999889999999999999764332 23457777
Q ss_pred cc------CCcc---------chHHHH-----hhhceee-CCcEEEEEehhhHHHHH
Q 028824 153 MF------PEVD---------STWKVC-----EKCLSFE-NYICLGSLSLKFLTFLL 188 (203)
Q Consensus 153 m~------~~v~---------~~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L 188 (203)
|. .++. ...+.+ ..+++.+ +|+++|+|+..|++..+
T Consensus 93 m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 93 LQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp GGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 75 2221 112222 3355555 69999999999995443
No 40
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.36 E-value=2.2e-12 Score=96.81 Aligned_cols=106 Identities=19% Similarity=0.272 Sum_probs=79.3
Q ss_pred Ccccccc---ccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc----CCCccccCc
Q 028824 81 GVYTVGD---FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS----GSGRADNSM 153 (203)
Q Consensus 81 ~~~~V~d---iM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~----~~~~v~~~m 153 (203)
...++++ +|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++..... ....+.++|
T Consensus 6 ~~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 83 (144)
T 2nyc_A 6 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEAL 83 (144)
T ss_dssp GGSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHH
T ss_pred hhcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHH
Confidence 3456777 8887 899999999999999999999999999999889999999999999764321 234566666
Q ss_pred cC------Ccc---------chHHHH-----hhhceee-CCcEEEEEehhhHHHHH
Q 028824 154 FP------EVD---------STWKVC-----EKCLSFE-NYICLGSLSLKFLTFLL 188 (203)
Q Consensus 154 ~~------~v~---------~~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L 188 (203)
.+ ++. ...+.+ ..+++.+ +|+++|+|+..|++..+
T Consensus 84 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l 139 (144)
T 2nyc_A 84 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYI 139 (144)
T ss_dssp HHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred hcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHH
Confidence 53 121 122222 3455554 79999999999995544
No 41
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.34 E-value=6.5e-12 Score=102.19 Aligned_cols=104 Identities=21% Similarity=0.162 Sum_probs=82.9
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCccCCccc--
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS-- 159 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~v~~-- 159 (203)
..+++++|.+ +++++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+++... ...+.++|.+++..
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~---~~~v~~im~~~~~~v~ 86 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL---DSSVFNKVSLPDFFVH 86 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT---TSBSGGGCBCTTCCEE
T ss_pred ccCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC---CCcHHHHccCCCEEEC
Confidence 3478999998 8999999999999999999999999999998899999999999987543 45678888765431
Q ss_pred -------hHHHH-----hhhceee-CCcEEEEEehhhHHHHHHH
Q 028824 160 -------TWKVC-----EKCLSFE-NYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 160 -------~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L~a 190 (203)
..+.+ ..+++.+ +|+++|+|+.+|++..+..
T Consensus 87 ~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 87 EEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp TTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 12222 3456655 5999999999999666554
No 42
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.33 E-value=2.8e-12 Score=107.91 Aligned_cols=121 Identities=19% Similarity=0.259 Sum_probs=93.8
Q ss_pred cceEecccccC----CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhh
Q 028824 68 SGTLTANSAAP----SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (203)
Q Consensus 68 ~g~~~~~~l~~----~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~ 143 (203)
.|.++.+++.. .....+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++....
T Consensus 137 vGivt~~dl~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 214 (296)
T 3ddj_A 137 VGIVTEREFLLLYKDLDEIFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAK 214 (296)
T ss_dssp EEEEEHHHHGGGGGGSCCCCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred EEEEeHHHHHHhhhcccccccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 78888887733 3456689999998 89999999999999999999999999999999999999999999976431
Q ss_pred ---------cCCCccccCccCCcc---------chHHHH-----hhhceee-CCcEEEEEehhhHHHHHHH
Q 028824 144 ---------SGSGRADNSMFPEVD---------STWKVC-----EKCLSFE-NYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 144 ---------~~~~~v~~~m~~~v~---------~~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L~a 190 (203)
.....+.++|.+++. ...+.+ ..+++.+ +|+++|+||..|++..+..
T Consensus 215 ~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~ 285 (296)
T 3ddj_A 215 AVDKLDPDYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHH 285 (296)
T ss_dssp HHHHTCTHHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HHhhcChhhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHH
Confidence 123456677765432 122222 3456655 8999999999999766654
No 43
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.32 E-value=6.1e-12 Score=107.08 Aligned_cols=107 Identities=22% Similarity=0.157 Sum_probs=85.5
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHC-----CCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCc
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~-----~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m 153 (203)
.+...+|+++|++ +++++.+++++.+|++.|.++ +++.+||+|++|+++|+||.+|++... ....+.++|
T Consensus 133 ~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~---~~~~v~~im 207 (286)
T 2oux_A 133 HYEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND---DDTLIADIL 207 (286)
T ss_dssp TSCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC---TTSBHHHHS
T ss_pred cCChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC---CCCcHHHHc
Confidence 5678899999998 899999999999999999987 889999999899999999999998652 345677777
Q ss_pred cCCccc---------hHHHH-----hhhcee-eCCcEEEEEehhhHHHHHHH
Q 028824 154 FPEVDS---------TWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 154 ~~~v~~---------~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~a 190 (203)
.+++.. ....+ ..++|. ++|+++|+||..|++..+..
T Consensus 208 ~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 208 NERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp BSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 654421 22222 235555 47999999999999777654
No 44
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.31 E-value=1.2e-11 Score=104.41 Aligned_cols=105 Identities=24% Similarity=0.219 Sum_probs=83.3
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHC-----CCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCcc
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~-----~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~ 154 (203)
+...+++++|++ +++++.+++++.+|++.|.++ +++.+||+|++|+++|+||.+|++.. .....+.++|.
T Consensus 132 ~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~---~~~~~v~~im~ 206 (278)
T 2yvy_A 132 YEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---DPRTRVAEIMN 206 (278)
T ss_dssp SCTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---CTTCBSTTTSB
T ss_pred CCcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---CCCCcHHHHhC
Confidence 456799999998 899999999999999999987 78999999988999999999999864 23457888886
Q ss_pred CCccc---------hHHHH-----hhhcee-eCCcEEEEEehhhHHHHHH
Q 028824 155 PEVDS---------TWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 155 ~~v~~---------~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~ 189 (203)
+++.. ....+ ..++|. ++|+++|+||..|++..+.
T Consensus 207 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 207 PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-
T ss_pred CCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHH
Confidence 65421 22222 235554 5799999999999966554
No 45
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.30 E-value=1.8e-11 Score=101.43 Aligned_cols=105 Identities=18% Similarity=0.265 Sum_probs=84.1
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc--CCCccccCccCCccc
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--GSGRADNSMFPEVDS 159 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~--~~~~v~~~m~~~v~~ 159 (203)
..+++++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++..... ....+.++|.+++..
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~ 160 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITRDVIV 160 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCC
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeE
Confidence 4589999998 899999999999999999999999999999999999999999999764332 233677788654421
Q ss_pred ---------hHHHH-----hhhceeeCCcEEEEEehhhHHHHH
Q 028824 160 ---------TWKVC-----EKCLSFENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 160 ---------~~~~~-----~~llv~~~g~lvGiVt~~DI~~~L 188 (203)
..+.+ ..+++.++|+++|+|+..|++..+
T Consensus 161 v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 161 ATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKLL 203 (280)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHH
Confidence 12222 346666899999999999996655
No 46
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.30 E-value=3.5e-12 Score=117.25 Aligned_cols=109 Identities=20% Similarity=0.181 Sum_probs=85.2
Q ss_pred CCccccccccccCCCeEEEcCC-CCHHHHHHHHHHCCCcEEEEEe-CCCeEEEEEehHHHhhchhh---cCCCccccCcc
Q 028824 80 SGVYTVGDFMTTKEELHVVKPT-TTVDEALEILVEKRITGFPVID-DDWKLVGLVSDYDLLALDSI---SGSGRADNSMF 154 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~-~ti~ea~~~m~~~~~~~lPVvd-~~g~lvGiVt~~Dll~~~~~---~~~~~v~~~m~ 154 (203)
+...+|+++|++ +++++.++ +++.+|+++|.+++++.+||+| ++|+++|+||.+||++.... .....+.++|.
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~ 458 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALN 458 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhc
Confidence 446899999998 89999999 9999999999999999999999 78999999999999976432 23457888997
Q ss_pred CCccc---------hHHHHh---hhce-eeC----CcEEEEEehhhHHHHHHH
Q 028824 155 PEVDS---------TWKVCE---KCLS-FEN----YICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 155 ~~v~~---------~~~~~~---~llv-~~~----g~lvGiVt~~DI~~~L~a 190 (203)
+++.. ....+. ..+| +++ |+++|+||..|++..+..
T Consensus 459 ~~~~~v~~~~~l~~a~~~m~~~~~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 459 KRVIRLNESEILGKLARVLEVDPSVLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp TTCCEEETTSBHHHHHHHHTTCSEEEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred CCCeEECCCCcHHHHHHHHhhCCEEEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 76531 122221 1334 442 899999999999555543
No 47
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.30 E-value=9.8e-12 Score=104.58 Aligned_cols=120 Identities=21% Similarity=0.225 Sum_probs=93.4
Q ss_pred cceEecccccCCC----------------CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEE
Q 028824 68 SGTLTANSAAPSS----------------GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131 (203)
Q Consensus 68 ~g~~~~~~l~~~~----------------~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGi 131 (203)
.|.++.+++...+ ...+++++|++ +++++.+++++.+|++.|.+++++.+||+|++|+++|+
T Consensus 62 ~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGi 139 (296)
T 3ddj_A 62 EGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGI 139 (296)
T ss_dssp EEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEE
T ss_pred EEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 7888887774333 25689999998 89999999999999999999999999999989999999
Q ss_pred EehHHHhhchhh-cCCCccccCccCCccc---------hHHHH-----hhhceee-CCcEEEEEehhhHHHHHH
Q 028824 132 VSDYDLLALDSI-SGSGRADNSMFPEVDS---------TWKVC-----EKCLSFE-NYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 132 Vt~~Dll~~~~~-~~~~~v~~~m~~~v~~---------~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L~ 189 (203)
||.+|+++.... .....+.++|.+++.. ..+.+ ..+++.+ +|+++|+|+..|++..+.
T Consensus 140 vt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 140 VTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp EEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred EeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 999999976443 2344677777654421 12222 3355554 899999999999977665
No 48
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.30 E-value=5.4e-12 Score=104.09 Aligned_cols=58 Identities=22% Similarity=0.396 Sum_probs=54.5
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
..+|+|+|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..|++++.
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~ 63 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATY 63 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHH
Confidence 4689999998 899999999999999999999999999999889999999999999753
No 49
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.29 E-value=7.4e-12 Score=104.15 Aligned_cols=120 Identities=20% Similarity=0.160 Sum_probs=89.7
Q ss_pred cceEecccccC-CC------CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHh--
Q 028824 68 SGTLTANSAAP-SS------GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-- 138 (203)
Q Consensus 68 ~g~~~~~~l~~-~~------~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll-- 138 (203)
.|.++.+++.. .+ ...+++++|.+ ++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|++
T Consensus 104 ~Giit~~di~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~ 181 (282)
T 2yzq_A 104 VGILTVGDIIRRYFAKSEKYKGVEIEPYYQR--YVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRD 181 (282)
T ss_dssp EEEEEHHHHHHHTTTTCSGGGGCBSTTTSBS--CCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGC
T ss_pred EEEEEHHHHHHHHHhccCCcccCcHHHHhCC--CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhh
Confidence 78888887743 22 35689999987 899999999999999999999999999999889999999999999
Q ss_pred ----hchh------h---------------------cCCCccccCccCCccc---------hHHHH-----hhhceeeC-
Q 028824 139 ----ALDS------I---------------------SGSGRADNSMFPEVDS---------TWKVC-----EKCLSFEN- 172 (203)
Q Consensus 139 ----~~~~------~---------------------~~~~~v~~~m~~~v~~---------~~~~~-----~~llv~~~- 172 (203)
+... . .....+.++|.+++.. +...+ ..+++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 261 (282)
T 2yzq_A 182 SEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGE 261 (282)
T ss_dssp GGGCC--------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETT
T ss_pred hhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCC
Confidence 4331 0 1234577888775531 11222 44666655
Q ss_pred CcEEEEEehhhHHHHHHHHh
Q 028824 173 YICLGSLSLKFLTFLLIFVN 192 (203)
Q Consensus 173 g~lvGiVt~~DI~~~L~a~~ 192 (203)
|+++|+||..|+ ++++.
T Consensus 262 ~~lvGiit~~Di---l~~~~ 278 (282)
T 2yzq_A 262 GDLIGLIRDFDL---LKVLV 278 (282)
T ss_dssp TEEEEEEEHHHH---GGGGC
T ss_pred CCEEEEEeHHHH---HHHHH
Confidence 699999999999 55443
No 50
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.29 E-value=6.1e-12 Score=107.08 Aligned_cols=119 Identities=18% Similarity=0.243 Sum_probs=90.6
Q ss_pred cceEeccccc---------CCCCccccccc---cccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehH
Q 028824 68 SGTLTANSAA---------PSSGVYTVGDF---MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 68 ~g~~~~~~l~---------~~~~~~~V~di---M~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.|.++.+++. ......+++++ |++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+
T Consensus 163 ~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~ 240 (323)
T 3t4n_C 163 VSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAY 240 (323)
T ss_dssp EEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETT
T ss_pred EEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHH
Confidence 7888877763 22345689999 887 899999999999999999999999999999999999999999
Q ss_pred HHhhchhh----cCCCccccCccC------Ccc---------chHHHH-----hhhceee-CCcEEEEEehhhHHHHH
Q 028824 136 DLLALDSI----SGSGRADNSMFP------EVD---------STWKVC-----EKCLSFE-NYICLGSLSLKFLTFLL 188 (203)
Q Consensus 136 Dll~~~~~----~~~~~v~~~m~~------~v~---------~~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L 188 (203)
|++++... .....+.++|.+ ++. ...+.+ ..+++.+ +|+++|+||..|++..+
T Consensus 241 dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l 318 (323)
T 3t4n_C 241 DVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYI 318 (323)
T ss_dssp HHHHHHHTTHHHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HHHHHHhhchhhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHH
Confidence 99976432 123456677765 332 122222 3355554 79999999999995544
No 51
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.21 E-value=7.4e-11 Score=107.32 Aligned_cols=107 Identities=23% Similarity=0.193 Sum_probs=85.3
Q ss_pred CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHC-----CCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCc
Q 028824 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153 (203)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~-----~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m 153 (203)
.+.+.+++++|++ +++++++++++.++++.|.++ +++.+||+|++|+++|+||.+|++.. .....+.++|
T Consensus 151 ~~~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~---~~~~~v~dim 225 (473)
T 2zy9_A 151 RYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---DPRTRVAEIM 225 (473)
T ss_dssp TSCTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS---CTTSBGGGTS
T ss_pred cCCCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC---CCCCcHHHHh
Confidence 4467899999998 999999999999999999986 58999999988999999999999864 2455788888
Q ss_pred cCCccc---------hHHHH-----hhhce-eeCCcEEEEEehhhHHHHHHH
Q 028824 154 FPEVDS---------TWKVC-----EKCLS-FENYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 154 ~~~v~~---------~~~~~-----~~llv-~~~g~lvGiVt~~DI~~~L~a 190 (203)
.+++.. ..+.+ ..++| +++|+++|+||.+|+++.+..
T Consensus 226 ~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 226 NPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp BSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 765421 22222 23454 457999999999999877654
No 52
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.21 E-value=6.6e-11 Score=98.35 Aligned_cols=116 Identities=15% Similarity=0.106 Sum_probs=84.6
Q ss_pred cceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhh-chhh---
Q 028824 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSI--- 143 (203)
Q Consensus 68 ~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~-~~~~--- 143 (203)
.|.++.+++...+...+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++ ....
T Consensus 45 ~Giv~~~dl~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~ 122 (282)
T 2yzq_A 45 VGIISVKRILVNPDEEQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEK 122 (282)
T ss_dssp EEEEESSCC----------CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSG
T ss_pred EEEEEHHHHHhhhccCCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCC
Confidence 789999988776778899999998 8999999999999999999999999999998899999999999997 5432
Q ss_pred cCCCccccCccCCccc---------hHHHH-----hhhcee-eCCcEEEEEehhhHH
Q 028824 144 SGSGRADNSMFPEVDS---------TWKVC-----EKCLSF-ENYICLGSLSLKFLT 185 (203)
Q Consensus 144 ~~~~~v~~~m~~~v~~---------~~~~~-----~~llv~-~~g~lvGiVt~~DI~ 185 (203)
.....+.++|..++.. ..+.+ ..+++. ++|+++|+|+..|++
T Consensus 123 ~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 123 YKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp GGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGG
T ss_pred cccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHh
Confidence 1234567778654421 12222 235554 478999999999996
No 53
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.20 E-value=5e-12 Score=118.74 Aligned_cols=61 Identities=23% Similarity=0.199 Sum_probs=55.9
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHH-HCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILV-EKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~-~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
..++|+|+|+++.++.+++++++++|+.+.|. +++++.+||+|++|+++|+||.+|+++..
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l 512 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRL 512 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTT
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHH
Confidence 67899999994338999999999999999999 79999999999999999999999999764
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.17 E-value=3e-11 Score=100.01 Aligned_cols=116 Identities=16% Similarity=0.237 Sum_probs=86.4
Q ss_pred cceEecccccC-----CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAAP-----SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~~-----~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|.++.+++.. .....+++++|++ ++.++++++++.++++.|.+++++.+||+ ++|+++|+||.+|+++...
T Consensus 128 ~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 128 ISLITERDVIRALLDKIDENEVIDDYITR--DVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp EEEEEHHHHHHHHGGGSCTTCBSGGGCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHT
T ss_pred EEEEEHHHHHHHHhhcCCCCCCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHh
Confidence 78888877622 1234589999998 89999999999999999999999999999 5799999999999997642
Q ss_pred hc--------------CCCccccCccCCcc---------chHHHH-----hhhceee-CCcEEEEEehhhHHH
Q 028824 143 IS--------------GSGRADNSMFPEVD---------STWKVC-----EKCLSFE-NYICLGSLSLKFLTF 186 (203)
Q Consensus 143 ~~--------------~~~~v~~~m~~~v~---------~~~~~~-----~~llv~~-~g~lvGiVt~~DI~~ 186 (203)
.. ....+.++|.+++. ...+.+ ..+++.+ +|+++|+||.+|++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~ 277 (280)
T 3kh5_A 205 SDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLK 277 (280)
T ss_dssp SHHHHHHHHSCCTHHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGG
T ss_pred hhhhhhhhcccchhhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHH
Confidence 11 12356666655432 122222 3355554 569999999999943
No 55
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.15 E-value=1.5e-10 Score=78.95 Aligned_cols=63 Identities=24% Similarity=0.334 Sum_probs=52.6
Q ss_pred eEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcC----CCccccCccCCcc
Q 028824 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG----SGRADNSMFPEVD 158 (203)
Q Consensus 95 ~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~----~~~v~~~m~~~v~ 158 (203)
++++.+++++.||+++|.+++++++||+| +|+++||||.+||++.....+ ..+++++|.+++.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~i 68 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPV 68 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCe
Confidence 68999999999999999999999999998 589999999999986433222 3368888887654
No 56
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.12 E-value=8.9e-11 Score=100.31 Aligned_cols=120 Identities=17% Similarity=0.185 Sum_probs=88.0
Q ss_pred cceEecccccCC---------CCcccccc---ccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehH
Q 028824 68 SGTLTANSAAPS---------SGVYTVGD---FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 68 ~g~~~~~~l~~~---------~~~~~V~d---iM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.|.++.+++... ....++++ +|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+
T Consensus 158 ~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~ 235 (334)
T 2qrd_G 158 VSVLTQYRILKFISMNCKETAMLRVPLNQMTIGTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESV 235 (334)
T ss_dssp EEEEEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETH
T ss_pred EEEeeHHHHHHHHHhhccchhhhhCcHHHhCCcccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHH
Confidence 688887776321 12467888 4887 899999999999999999999999999999889999999999
Q ss_pred HHhhchhhc----CCCccccCccC------Ccc---------chHHHH-----hhhceee-CCcEEEEEehhhHHHHHH
Q 028824 136 DLLALDSIS----GSGRADNSMFP------EVD---------STWKVC-----EKCLSFE-NYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 136 Dll~~~~~~----~~~~v~~~m~~------~v~---------~~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~L~ 189 (203)
|++++.... ....+.++|.. ++. ...+.+ ..+++.+ +|+++|+||..|++..+.
T Consensus 236 dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~ 314 (334)
T 2qrd_G 236 DVMHLIQDGDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYII 314 (334)
T ss_dssp HHHHHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHHHHhhccccccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHH
Confidence 999764321 12345566653 221 122222 3355554 799999999999955443
No 57
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.03 E-value=7.5e-10 Score=94.49 Aligned_cols=111 Identities=16% Similarity=0.137 Sum_probs=80.4
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhchhhc---CC--------C
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSIS---GS--------G 147 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~~~~---~~--------~ 147 (203)
+...+|+|+|+++.+++++++++++.+|++.|.+++++++||+|++ ++++|+||.+|++...... .. .
T Consensus 32 l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~ 111 (330)
T 2v8q_E 32 MKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEH 111 (330)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGC
T ss_pred HHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhc
Confidence 4667999999443389999999999999999999999999999987 7999999999998653210 00 0
Q ss_pred c-------cccCccCCcc---------chHHHH-----hhhceee--CCcEEEEEehhhHHHHHHH
Q 028824 148 R-------ADNSMFPEVD---------STWKVC-----EKCLSFE--NYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 148 ~-------v~~~m~~~v~---------~~~~~~-----~~llv~~--~g~lvGiVt~~DI~~~L~a 190 (203)
. +.++|.+++. ...+.+ ..+++.+ +|+++|+||.+|++..+..
T Consensus 112 ~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~ 177 (330)
T 2v8q_E 112 KIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKL 177 (330)
T ss_dssp BHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHH
T ss_pred cHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHH
Confidence 0 1234444332 122222 3355554 7999999999999766543
No 58
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.01 E-value=8.1e-10 Score=81.82 Aligned_cols=71 Identities=27% Similarity=0.302 Sum_probs=62.8
Q ss_pred cceEeccccc----CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAA----PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~----~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++. ......+++++|.+ +.++.+++++.+|++.|.+++++.+||+|++|+++|+||..||++..
T Consensus 50 vGivt~~dl~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 50 EGILMAKDLLPFMRSDAEAFSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp EEEEEGGGGGGGGSTTCCCCCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred EEEEEHHHHHHHHhccCCCCCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 7999988885 33457789999954 77999999999999999999999999999999999999999999753
No 59
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.01 E-value=6.8e-10 Score=101.99 Aligned_cols=102 Identities=22% Similarity=0.304 Sum_probs=78.0
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeC--CCeEEEEEehHHHhhchhhcCCCccccCccC-Ccc---
Q 028824 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLALDSISGSGRADNSMFP-EVD--- 158 (203)
Q Consensus 85 V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~--~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~-~v~--- 158 (203)
.+++|.+ +++++.+++++.+++++|.+++++++||+|+ +|+++|+||.+||+.. ......+.++|.+ ++.
T Consensus 115 ~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~--~~~~~~V~~vM~~~~~vtv~ 190 (511)
T 3usb_A 115 SESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI--QDYSIKISDVMTKEQLITAP 190 (511)
T ss_dssp SSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC--CCSSSBHHHHCCCCCCCCEE
T ss_pred ccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh--ccCCCcHHHhcccCCCEEEC
Confidence 4555666 8899999999999999999999999999998 8999999999999752 2334567778875 332
Q ss_pred ------chHHHH-----hhhc-eeeCCcEEEEEehhhHHHHHHH
Q 028824 159 ------STWKVC-----EKCL-SFENYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 159 ------~~~~~~-----~~ll-v~~~g~lvGiVt~~DI~~~L~a 190 (203)
...+.+ ..++ ++++|+++|+||.+|+++.+..
T Consensus 191 ~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 191 VGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp TTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 122222 2344 4568999999999999666654
No 60
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.00 E-value=7.3e-10 Score=89.89 Aligned_cols=72 Identities=24% Similarity=0.239 Sum_probs=66.8
Q ss_pred cceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
-|.++.+++.......+++++|++ +++++++++++.++++.|.++++..+||+|++|+++|+||..|++...
T Consensus 101 vGivt~~dll~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 101 LGTVRRYDIFKHEPHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALV 172 (205)
T ss_dssp EEEEEHHHHTTSCTTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHhCCCcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 799999998666678899999998 899999999999999999999999999999999999999999999764
No 61
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.00 E-value=1.1e-09 Score=82.33 Aligned_cols=71 Identities=21% Similarity=0.183 Sum_probs=63.3
Q ss_pred cceEecccccC-----CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAP-----SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~-----~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++.. .....+++++|.+ +.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||++..
T Consensus 50 vGivt~~dl~~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 50 LGVLLAKDLLPLILKADGDSDDVKKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQI 125 (136)
T ss_dssp EEEEEGGGGGGGGGSSSGGGCCGGGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC
T ss_pred EEEEEHHHHHHHHHhccCCCcCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 79999888853 3456789999965 88999999999999999999999999999999999999999999754
No 62
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.99 E-value=1.3e-09 Score=81.10 Aligned_cols=71 Identities=18% Similarity=0.147 Sum_probs=62.0
Q ss_pred cceEecccccCC--CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPS--SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~--~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++... ....+++++|.+ +.++.+++++.+|++.|.+++++.+||+|++|+++|+||..|+++..
T Consensus 52 ~Givt~~dl~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 52 IGILLAKDLLRYMLEPALDIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQI 124 (129)
T ss_dssp EEEEEGGGGGGGGTCTTSCGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHhHhccCCcCHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 799999988433 356789999964 78999999999999999999999999999889999999999999754
No 63
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.98 E-value=7.1e-10 Score=86.39 Aligned_cols=57 Identities=28% Similarity=0.367 Sum_probs=53.6
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
..+++++|++ +++++.+++++.+|+++|.+++++++||+| +|+++|+||..||+++.
T Consensus 104 ~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 104 KLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp TCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred ccchhhhccc--CcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 5689999999 899999999999999999999999999998 69999999999999864
No 64
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.98 E-value=2e-09 Score=71.56 Aligned_cols=62 Identities=23% Similarity=0.313 Sum_probs=52.1
Q ss_pred eEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhc----CCCccccCccCCc
Q 028824 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS----GSGRADNSMFPEV 157 (203)
Q Consensus 95 ~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~----~~~~v~~~m~~~v 157 (203)
+.++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|++++.... ....+.++|.+++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 67 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCC
Confidence 678999999999999999999999999997 9999999999999864332 2345777777654
No 65
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.97 E-value=1.3e-09 Score=88.48 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=67.3
Q ss_pred cceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|.++.+++.......+++++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++...
T Consensus 57 ~Givt~~dl~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~ 129 (213)
T 1vr9_A 57 RGVVNKEDLLDLDLDSSVFNKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALI 129 (213)
T ss_dssp EEEEEGGGGTTSCTTSBSGGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHhhcCCCcHHHHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 799999999776677889999998 8999999999999999999999999999998899999999999997643
No 66
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.97 E-value=1.7e-09 Score=92.19 Aligned_cols=119 Identities=20% Similarity=0.252 Sum_probs=83.0
Q ss_pred cceEecccccCCC------------Cccccccc--cc-cCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEE
Q 028824 68 SGTLTANSAAPSS------------GVYTVGDF--MT-TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132 (203)
Q Consensus 68 ~g~~~~~~l~~~~------------~~~~V~di--M~-~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiV 132 (203)
.|.++.+++.... ...+++++ |+ + ++.++.+++++.++++.|.+++++.+||+|++|+++|+|
T Consensus 163 ~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Gii 240 (330)
T 2v8q_E 163 LYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIY 240 (330)
T ss_dssp EEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEE
T ss_pred EEEEcHHHHHHHHHHHhhccCchhhhcCCHHHhcccCcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEE
Confidence 6788776662211 12344554 54 4 789999999999999999999999999999889999999
Q ss_pred ehHHHhhchhhcC----CCccccCcc------CCcc---------chHHHH-----hhhceee-CCcEEEEEehhhHHHH
Q 028824 133 SDYDLLALDSISG----SGRADNSMF------PEVD---------STWKVC-----EKCLSFE-NYICLGSLSLKFLTFL 187 (203)
Q Consensus 133 t~~Dll~~~~~~~----~~~v~~~m~------~~v~---------~~~~~~-----~~llv~~-~g~lvGiVt~~DI~~~ 187 (203)
|.+|+++...... ...+.++|. .++. ...+.+ ..+++.+ +|+++|+|+..|++..
T Consensus 241 t~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~ 320 (330)
T 2v8q_E 241 SKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQA 320 (330)
T ss_dssp EGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred EHHHHHHHHhccccccccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHH
Confidence 9999997654321 234555552 3221 122222 3455554 6999999999999443
Q ss_pred H
Q 028824 188 L 188 (203)
Q Consensus 188 L 188 (203)
+
T Consensus 321 ~ 321 (330)
T 2v8q_E 321 L 321 (330)
T ss_dssp H
T ss_pred H
Confidence 3
No 67
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.95 E-value=4.2e-10 Score=103.02 Aligned_cols=100 Identities=21% Similarity=0.309 Sum_probs=72.7
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCccC-C-cc---
Q 028824 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP-E-VD--- 158 (203)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~-~-v~--- 158 (203)
+++++|+. +++++++++++.+++++|.+++++.+||+|++++++|+||.+||+.. ......+.++|.+ + +.
T Consensus 90 ~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~--~~~~~~v~diM~p~~~~vtv~ 165 (496)
T 4fxs_A 90 IFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV--TDLTKSVAAVMTPKERLATVK 165 (496)
T ss_dssp HCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC--CCTTSBGGGTSEEGGGCCEEE
T ss_pred cccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc--ccCCCcHHHHhcCCCCCEEEC
Confidence 55778998 99999999999999999999999999999988999999999999742 2344567888882 1 21
Q ss_pred ------chHHH-----Hhhhc-eeeCCcEEEEEehhhHHHH
Q 028824 159 ------STWKV-----CEKCL-SFENYICLGSLSLKFLTFL 187 (203)
Q Consensus 159 ------~~~~~-----~~~ll-v~~~g~lvGiVt~~DI~~~ 187 (203)
...+. ...++ ++++|+++|+||.+|+++.
T Consensus 166 ~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 166 EGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp CC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHh
Confidence 11111 13344 4568999999999999443
No 68
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.94 E-value=7e-10 Score=82.14 Aligned_cols=72 Identities=15% Similarity=0.230 Sum_probs=63.2
Q ss_pred cceEecccccCCCC-----ccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPSSG-----VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~~~-----~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++..... ..+++++|.+ ++.++.+++++.++++.|.++++..+||+|++|+++|+||..|++++.
T Consensus 48 ~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (128)
T 3gby_A 48 LGMVHLSRLLEGRKGWPTVKEKLGEELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFL 124 (128)
T ss_dssp EEEEEHHHHHTTCSSSCCTTCBCCGGGCB--CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHHhhCCcccCcHHHHccC--CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHH
Confidence 78999888743221 2569999998 899999999999999999999999999999999999999999999764
No 69
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.94 E-value=1e-09 Score=82.69 Aligned_cols=73 Identities=29% Similarity=0.446 Sum_probs=63.4
Q ss_pred cceEecccccC-------------------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeE
Q 028824 68 SGTLTANSAAP-------------------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (203)
Q Consensus 68 ~g~~~~~~l~~-------------------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~l 128 (203)
.|.++.+++.. .....+++++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|++
T Consensus 51 ~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~ 128 (152)
T 4gqw_A 51 VGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKL 128 (152)
T ss_dssp EEEEEHHHHTTCC----CCHHHHHHHTC-----CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBE
T ss_pred EEEEEHHHHHHhhcccCcccchHHHHHHHHHhccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcE
Confidence 78888888742 2345789999998 89999999999999999999999999999989999
Q ss_pred EEEEehHHHhhchh
Q 028824 129 VGLVSDYDLLALDS 142 (203)
Q Consensus 129 vGiVt~~Dll~~~~ 142 (203)
+|+||.+||++...
T Consensus 129 ~Giit~~dil~~~~ 142 (152)
T 4gqw_A 129 VGIITRGNVVRAAL 142 (152)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHHHHH
Confidence 99999999998643
No 70
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.93 E-value=3.3e-09 Score=96.44 Aligned_cols=102 Identities=19% Similarity=0.277 Sum_probs=80.8
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEe--CCCeEEEEEehHHHhhchhhcCCCccccCccC-Ccc--
Q 028824 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFP-EVD-- 158 (203)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd--~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~-~v~-- 158 (203)
.++++|++ ++.++.+++++.++++.|.+++++.+||+| ++++++|+||.+|++... .....+.++|.+ ++.
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~--~~~~~v~~im~~~~~~~v 166 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS--DYNAPISEHMTSEHLVTA 166 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--CSSSBTTTSCCCSCCCCE
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--cCCCcHHHHcCCCCCEEE
Confidence 46889998 899999999999999999999999999999 789999999999998642 245578888885 332
Q ss_pred -------chHHHH-----hhhce-eeCCcEEEEEehhhHHHHHH
Q 028824 159 -------STWKVC-----EKCLS-FENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 159 -------~~~~~~-----~~llv-~~~g~lvGiVt~~DI~~~L~ 189 (203)
...+.+ ..+++ +++|+++|+||.+|++..+.
T Consensus 167 ~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 167 AVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp ETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 122222 23444 45899999999999966655
No 71
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.92 E-value=1.1e-09 Score=85.65 Aligned_cols=72 Identities=21% Similarity=0.182 Sum_probs=63.4
Q ss_pred cceEecccccCCC---CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAAPSS---GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~~~~---~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|.++.+++.... ...+++++| + ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..||++...
T Consensus 89 vGivt~~dl~~~~~~~~~~~v~~im-~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~ 163 (172)
T 3lhh_A 89 VGIISAKQLLSESIAGERLELVDLV-K--NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALT 163 (172)
T ss_dssp EEEEEHHHHHHHHHTTCCCCGGGGC-B--CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHHHHhhcCcccHHHHh-c--CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 7999988873322 367899999 6 7999999999999999999999999999998899999999999997643
No 72
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.92 E-value=1.3e-09 Score=84.68 Aligned_cols=59 Identities=31% Similarity=0.513 Sum_probs=55.3
Q ss_pred CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
...+++++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++.
T Consensus 96 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 96 YGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred ccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHH
Confidence 46789999998 899999999999999999999999999999899999999999999764
No 73
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.91 E-value=1.9e-09 Score=80.96 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=62.7
Q ss_pred cceEecccccCC-----CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPS-----SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~-----~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++... ....+++++|.+ ++.++.++ ++.+|++.|.+++++.+||+|++|+++|+||..||+++.
T Consensus 51 ~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 51 VAVVSERDILRAVAQRLDLDGPAMPIANS--PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp EEEEEHHHHHHHHHTTCCTTSBSGGGCBC--CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred EEEEEHHHHHHHHhcCCCCCCCHHHHcCC--CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 788988887321 246789999998 89999999 999999999999999999999889999999999999753
No 74
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.90 E-value=4.9e-09 Score=88.98 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=73.0
Q ss_pred ccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCe-----EEEEEehHHHhhchhh------cCCCccccC--
Q 028824 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK-----LVGLVSDYDLLALDSI------SGSGRADNS-- 152 (203)
Q Consensus 86 ~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~-----lvGiVt~~Dll~~~~~------~~~~~v~~~-- 152 (203)
.++|.+ +++++.+++++.+|++.|.+++++.+||+|++++ ++|+||.+|+++.... .....+.++
T Consensus 117 ~~~~~~--~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~ 194 (323)
T 3t4n_C 117 LGVDQL--DTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLNI 194 (323)
T ss_dssp TTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTC
T ss_pred hCCCCC--CceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcCC
Confidence 345566 7999999999999999999999999999998775 9999999999976321 223356677
Q ss_pred -ccCCccc---------hHHHH-----hhhcee-eCCcEEEEEehhhHHHHHH
Q 028824 153 -MFPEVDS---------TWKVC-----EKCLSF-ENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 153 -m~~~v~~---------~~~~~-----~~llv~-~~g~lvGiVt~~DI~~~L~ 189 (203)
|..++.. ..+.+ ..+++. ++|+++|+|+..|++..+.
T Consensus 195 ~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 195 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp SBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHH
T ss_pred CCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHh
Confidence 6544321 12222 335554 5789999999999966554
No 75
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.89 E-value=1.5e-09 Score=79.14 Aligned_cols=72 Identities=26% Similarity=0.383 Sum_probs=62.8
Q ss_pred cceEecccccCC--CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPS--SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~--~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++... ....+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+||+++.
T Consensus 45 ~G~vt~~dl~~~~~~~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 45 VGIITSWDIAKALAQNKKTIEEIMTR--NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp EEEECHHHHHHHHHTTCCBGGGTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHHHhcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHh
Confidence 788888877321 233489999998 899999999999999999999999999999889999999999999754
No 76
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.89 E-value=1.8e-09 Score=80.34 Aligned_cols=71 Identities=28% Similarity=0.402 Sum_probs=63.2
Q ss_pred cceEecccccC-------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhc
Q 028824 68 SGTLTANSAAP-------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (203)
Q Consensus 68 ~g~~~~~~l~~-------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~ 140 (203)
.|.++.+++.. .....+++++|.+ ++.++++++++.++++.|.+++++.+||+| +|+++|+||.+|++++
T Consensus 52 ~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~ 128 (135)
T 2rc3_A 52 VGILTERDFSRKSYLLDKPVKDTQVKEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKD 128 (135)
T ss_dssp EEEEEHHHHHHHGGGSSSCGGGSBGGGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred EEEEehHHHHHHHHHcCCCcccCCHHHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHH
Confidence 68888887742 2457899999998 899999999999999999999999999999 7999999999999976
Q ss_pred h
Q 028824 141 D 141 (203)
Q Consensus 141 ~ 141 (203)
.
T Consensus 129 ~ 129 (135)
T 2rc3_A 129 A 129 (135)
T ss_dssp H
T ss_pred H
Confidence 4
No 77
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.89 E-value=1.7e-09 Score=80.40 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=61.8
Q ss_pred cceEecccccC----CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAP----SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~----~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++.. .....+++++|. ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..|+++..
T Consensus 53 ~Givt~~dl~~~~~~~~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 53 IGFVHRLELFKMQQSGSGQKQLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp EEECCHHHHHHHHHTTTTTSBHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHHhcCCCcCCHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 78888887732 234678999995 488999999999999999999999999999999999999999999754
No 78
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.88 E-value=1.6e-09 Score=82.13 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=62.6
Q ss_pred cceEecccccCC---CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPS---SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~---~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++... ....+++++| + ++.++++++++.+|++.|.+++++.+||+|++|+++|+||..||++..
T Consensus 70 vGivt~~dl~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l 143 (148)
T 3lv9_A 70 LGFVHIRDLYNQKINENKIELEEIL-R--DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEI 143 (148)
T ss_dssp EEEEEHHHHHHHHHHHSCCCGGGTC-B--CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHHhcCCCccHHHhc-C--CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 799998887332 1167899999 6 799999999999999999999999999999989999999999999754
No 79
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.88 E-value=6.3e-09 Score=88.73 Aligned_cols=62 Identities=26% Similarity=0.271 Sum_probs=55.8
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC-CeEEEEEehHHHhhch
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALD 141 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~-g~lvGiVt~~Dll~~~ 141 (203)
+...+|+|+|+++.+++++++++++.+|++.|.+++++++||+|++ |+++|+|+.+|++...
T Consensus 19 l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 19 IRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred HhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 4568999999875568899999999999999999999999999976 8999999999999753
No 80
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.88 E-value=1.8e-09 Score=82.59 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=63.3
Q ss_pred cceEecccccCC---CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAAPS---SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~~~---~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|.++.+++... ....+++++| + ++.++.+++++.+|++.|.++++..+||+|++|+++|+||..||++...
T Consensus 68 vGivt~~dl~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 68 IGYAYNYDIVRQARIDDKAKISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp EEEEEHHHHHHHHHHHTTSBGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHH
T ss_pred EEEEEHHHHHhHHhcCCCCcHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 789998887322 2367899999 6 7999999999999999999999999999999999999999999997643
No 81
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.87 E-value=1e-09 Score=85.09 Aligned_cols=85 Identities=21% Similarity=0.313 Sum_probs=67.8
Q ss_pred ccccccccccccCCccccccceEecccccC----------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcE
Q 028824 49 LATSSDRVSALRRSSAVFASGTLTANSAAP----------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118 (203)
Q Consensus 49 ~~~~~~~~~~~r~~~~~~~~g~~~~~~l~~----------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~ 118 (203)
.++++.||... .... .|.++.+++.. .....+|+++|++ ++.++++++++.+|++.|.++++
T Consensus 46 ~~~s~~pVvd~---~~~l-vGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~-- 117 (156)
T 3k6e_A 46 MTYTRVPVVTD---EKQF-VGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDESF-- 117 (156)
T ss_dssp SSSSEEEEECC----CBE-EEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC--SCCCBCTTCCHHHHHHHTTTSSE--
T ss_pred cCCcEEEEEcC---CCcE-EEEEEecchhhhhhhcccccccccccCHHHhhcC--CceecccccHHHHHHHHHHHcCC--
Confidence 34566677642 2234 78888777521 2356789999998 89999999999999999998765
Q ss_pred EEEEeCCCeEEEEEehHHHhhch
Q 028824 119 FPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 119 lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
+||+|++|+++|+||.+||+++.
T Consensus 118 lpVVd~~g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITRKSILKAV 140 (156)
T ss_dssp EEEECTTSBEEEEEEHHHHHHHH
T ss_pred eEEEecCCEEEEEEEHHHHHHHH
Confidence 99999999999999999999864
No 82
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.87 E-value=3.4e-09 Score=81.49 Aligned_cols=68 Identities=21% Similarity=0.182 Sum_probs=60.9
Q ss_pred cceEecccccCCC---CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHh
Q 028824 68 SGTLTANSAAPSS---GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138 (203)
Q Consensus 68 ~g~~~~~~l~~~~---~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll 138 (203)
.|.++.+++.... ...+++++|.+ +.++++++++.+|++.|.+++++.+||+|++|+++|+||..||+
T Consensus 85 vGivt~~dl~~~~~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 85 LGILHAKDLLKYMFNPEQFHLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp EEEEEGGGGGGGSSCGGGCCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred EEEEEHHHHHHHHHcCCcccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 7999999884432 46789999965 88999999999999999999999999999999999999999986
No 83
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.87 E-value=2.4e-09 Score=81.04 Aligned_cols=71 Identities=17% Similarity=0.290 Sum_probs=62.0
Q ss_pred cceEecccccC-----------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHH
Q 028824 68 SGTLTANSAAP-----------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 68 ~g~~~~~~l~~-----------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~D 136 (203)
.|.++.+++.. .....+++++|.+ ++.++.+++++.+|++.|.++++ +||+|++|+++|+||..|
T Consensus 61 ~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~d 136 (150)
T 3lqn_A 61 HGLISTAMILDGILGLERIEFERLEEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRA 136 (150)
T ss_dssp EEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHH
T ss_pred EEEEEHHHHHHHHHhhcccchhHHhcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHH
Confidence 78898888732 2356789999998 89999999999999999999987 999998999999999999
Q ss_pred Hhhchh
Q 028824 137 LLALDS 142 (203)
Q Consensus 137 ll~~~~ 142 (203)
|+++..
T Consensus 137 il~~l~ 142 (150)
T 3lqn_A 137 ILKLLN 142 (150)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997643
No 84
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.86 E-value=4.1e-09 Score=78.11 Aligned_cols=73 Identities=25% Similarity=0.357 Sum_probs=63.9
Q ss_pred cceEecccccC-----CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAAP-----SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~~-----~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|.++.+++.. .....+++++|.+ ++.++++++++.++++.|.+++++.+||+|++|+++|+||..|+++...
T Consensus 47 ~Givt~~dl~~~~~~~~~~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 47 VGIITERDIVKAIGKGKSLETKAEEFMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp EEEEEHHHHHHHHHTTCCTTCBGGGTSEE--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred EEEEcHHHHHHHHhcCCCcccCHHHHcCC--CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 78898888732 1345789999998 8999999999999999999999999999998899999999999997643
No 85
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.86 E-value=2.8e-09 Score=79.49 Aligned_cols=71 Identities=18% Similarity=0.049 Sum_probs=61.1
Q ss_pred cceEecccccCC------CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPS------SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~------~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++... +...+++++| + ++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 49 vGivt~~dl~~~~~~~~~~~~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 49 ISMLRVREAYRLMTEKKEFTKEIMLRAA-D--EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEI 125 (130)
T ss_dssp EEEEEHHHHHHHHTSSSCCCHHHHHHHS-B--CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHHhccCccchhhHHHhc-c--CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHH
Confidence 789998887321 2345789999 4 588999999999999999999999999999999999999999999754
No 86
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.85 E-value=2.8e-09 Score=82.46 Aligned_cols=72 Identities=24% Similarity=0.289 Sum_probs=64.3
Q ss_pred cceEecccccC-------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhc
Q 028824 68 SGTLTANSAAP-------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (203)
Q Consensus 68 ~g~~~~~~l~~-------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~ 140 (203)
.|.++.+++.. .....+++++|.+ ++.++.+++++.++++.|.+++++.+||+|+ |+++|+||..||+++
T Consensus 71 ~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~ 147 (165)
T 3fhm_A 71 LGIFTERDLVKAVAGQGAASLQQSVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKA 147 (165)
T ss_dssp EEEEEHHHHHHHHHHHGGGGGTSBGGGTSBS--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHH
T ss_pred EEEEEHHHHHHHHHhcCCccccCCHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 78999888743 3456899999998 8999999999999999999999999999998 999999999999976
Q ss_pred hh
Q 028824 141 DS 142 (203)
Q Consensus 141 ~~ 142 (203)
..
T Consensus 148 ~~ 149 (165)
T 3fhm_A 148 RI 149 (165)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 87
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.84 E-value=3.4e-10 Score=103.17 Aligned_cols=102 Identities=24% Similarity=0.349 Sum_probs=4.7
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCccC--Cccc--
Q 028824 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP--EVDS-- 159 (203)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~--~v~~-- 159 (203)
+++++|++ +++++++++++.++++.|.+++++.+||+|++|+++|+||.+|+++.. .....+.++|.+ ++..
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~--~~~~~v~~im~~~~~~~~v~ 171 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK--NLSKKIKDLMTPREKLIVAP 171 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc--CCCCcHHHHhCCCCCCeEEC
Confidence 57889998 899999999999999999999999999999889999999999998632 234567788875 4321
Q ss_pred -------hHHHH-----hhhce-eeCCcEEEEEehhhHHHHHH
Q 028824 160 -------TWKVC-----EKCLS-FENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 160 -------~~~~~-----~~llv-~~~g~lvGiVt~~DI~~~L~ 189 (203)
..+.+ ..++| +++|+++|+|+..|++..+.
T Consensus 172 ~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 172 PDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -------------------------------------CHHHHT
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 11111 33444 46899999999999955543
No 88
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.84 E-value=4.2e-09 Score=78.05 Aligned_cols=71 Identities=24% Similarity=0.450 Sum_probs=62.4
Q ss_pred cceEeccccc-C------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhc
Q 028824 68 SGTLTANSAA-P------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (203)
Q Consensus 68 ~g~~~~~~l~-~------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~ 140 (203)
.|.++.+++. . .....+++++|.+ ++.++++++++.++++.|.+++++.+||+|+ |+++|+||..||++.
T Consensus 52 ~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 52 HGMLTDRDIVIKGLAAGLDPNTATAGELARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARH 128 (133)
T ss_dssp EEEEEHHHHHHTTGGGTCCTTTSBHHHHHTT--CCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHT
T ss_pred EEEEeHHHHHHHHHhcCCCccccCHHHHhcC--CCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 7888888774 1 2245789999998 8999999999999999999999999999997 999999999999975
Q ss_pred h
Q 028824 141 D 141 (203)
Q Consensus 141 ~ 141 (203)
.
T Consensus 129 l 129 (133)
T 1y5h_A 129 L 129 (133)
T ss_dssp C
T ss_pred H
Confidence 3
No 89
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.83 E-value=3.2e-10 Score=103.91 Aligned_cols=105 Identities=17% Similarity=0.041 Sum_probs=3.0
Q ss_pred cccccc-cccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCC---CeEEEEEehHHHhhchhhcCCCccccCccCC--
Q 028824 83 YTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD---WKLVGLVSDYDLLALDSISGSGRADNSMFPE-- 156 (203)
Q Consensus 83 ~~V~di-M~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~---g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~-- 156 (203)
++..++ |++ +++++++++++.++++.|.+++++.+||+|++ |+++|+||.+||+.. .......+.++|.+.
T Consensus 96 V~~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~~~~~~~V~diM~~~~~ 172 (503)
T 1me8_A 96 VKNFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-LTQTETKVSDMMTPFSK 172 (503)
T ss_dssp HHTTTC--------------------------------------------------------------------------
T ss_pred hhhcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-hccccCcHHHHhCCCCC
Confidence 444555 998 89999999999999999999999999999987 899999999999864 223345677888864
Q ss_pred ccc---------hHHHH-----hhhc-eeeCCcEEEEEehhhHHHHHHH
Q 028824 157 VDS---------TWKVC-----EKCL-SFENYICLGSLSLKFLTFLLIF 190 (203)
Q Consensus 157 v~~---------~~~~~-----~~ll-v~~~g~lvGiVt~~DI~~~L~a 190 (203)
+.. ..+.+ ..++ ++++|+++|+||.+|++..+..
T Consensus 173 ~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 173 LVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp -------------------------------------------------
T ss_pred CEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc
Confidence 321 11222 3344 4468999999999999655543
No 90
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.83 E-value=2.8e-09 Score=77.93 Aligned_cols=71 Identities=24% Similarity=0.339 Sum_probs=62.6
Q ss_pred cceEecccccC------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAP------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
-|.++.+++.. .....+++++|.+ ++.++.+++++.++++.|.+++++.+||+|+ |+++|+||..|++++.
T Consensus 44 ~G~it~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 44 VGIVTTWDVLEAIAEGDDLAEVKVWEVMER--DLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAK 120 (125)
T ss_dssp EEEEEHHHHHHHHHHTCCTTTSBHHHHCBC--GGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHH
T ss_pred EEEEeHHHHHHHHhcCCcccccCHHHHcCC--CCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 68888887732 2357789999998 8999999999999999999999999999997 9999999999999754
No 91
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.82 E-value=4.2e-09 Score=80.98 Aligned_cols=75 Identities=23% Similarity=0.295 Sum_probs=65.0
Q ss_pred cceEecccccC------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCC---eEEEEEehHHHh
Q 028824 68 SGTLTANSAAP------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW---KLVGLVSDYDLL 138 (203)
Q Consensus 68 ~g~~~~~~l~~------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g---~lvGiVt~~Dll 138 (203)
.|.++.+++.. .....+++++|.+..++.++.+++++.+|++.|.+++++.+||+|++| +++|+||..||+
T Consensus 60 ~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil 139 (159)
T 3fv6_A 60 VGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMT 139 (159)
T ss_dssp EEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHH
T ss_pred EEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHH
Confidence 78999888733 346779999998644588999999999999999999999999999888 999999999999
Q ss_pred hchh
Q 028824 139 ALDS 142 (203)
Q Consensus 139 ~~~~ 142 (203)
++..
T Consensus 140 ~~l~ 143 (159)
T 3fv6_A 140 KILV 143 (159)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 92
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.82 E-value=4.6e-09 Score=78.17 Aligned_cols=72 Identities=28% Similarity=0.401 Sum_probs=62.8
Q ss_pred cceEecccc-cC-----CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCC-----CcEEEEEeCCCeEEEEEehHH
Q 028824 68 SGTLTANSA-AP-----SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKR-----ITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 68 ~g~~~~~~l-~~-----~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~-----~~~lPVvd~~g~lvGiVt~~D 136 (203)
.|.++.+++ .. .....+++++|.+ ++.++.+++++.++++.|.+++ ++.+||+|++|+++|+||..|
T Consensus 52 ~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~d 129 (138)
T 2p9m_A 52 IGIVTTTDIGYNLIRDKYTLETTIGDVMTK--DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGD 129 (138)
T ss_dssp EEEEEHHHHHHHHTTTCCCSSCBHHHHSCS--SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHH
T ss_pred EEEEEHHHHHHHHHhhcccCCcCHHHHhCC--CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHH
Confidence 788888877 32 3456789999998 8999999999999999999999 999999998899999999999
Q ss_pred Hhhch
Q 028824 137 LLALD 141 (203)
Q Consensus 137 ll~~~ 141 (203)
+++..
T Consensus 130 ll~~~ 134 (138)
T 2p9m_A 130 IIRTI 134 (138)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99754
No 93
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.82 E-value=4.3e-09 Score=80.39 Aligned_cols=72 Identities=32% Similarity=0.498 Sum_probs=63.8
Q ss_pred cceEecccccCC-------CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhc
Q 028824 68 SGTLTANSAAPS-------SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (203)
Q Consensus 68 ~g~~~~~~l~~~-------~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~ 140 (203)
-|.++.+++... ....+++++|.+ ++.++.+++++.++++.|.+++++.+||+| +|+++|+||..||+++
T Consensus 56 ~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~ 132 (157)
T 4fry_A 56 AGIVTERDYARKVVLQERSSKATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKS 132 (157)
T ss_dssp EEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred EEEEEHHHHHHHHHhccCCccccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHH
Confidence 788988887321 357889999998 899999999999999999999999999999 7999999999999987
Q ss_pred hh
Q 028824 141 DS 142 (203)
Q Consensus 141 ~~ 142 (203)
..
T Consensus 133 l~ 134 (157)
T 4fry_A 133 VI 134 (157)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 94
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.81 E-value=5e-09 Score=79.57 Aligned_cols=69 Identities=29% Similarity=0.360 Sum_probs=61.1
Q ss_pred cceEecccccC------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhh
Q 028824 68 SGTLTANSAAP------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139 (203)
Q Consensus 68 ~g~~~~~~l~~------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~ 139 (203)
.|.++.+++.. .....+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++ +++|+||..||++
T Consensus 74 ~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 74 IGIFTDGDLRRVFDTGVDMRDASIADVMTR--GGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp EEEEEHHHHHHHHCSSSCCTTCBHHHHSEE--SCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred EEEecHHHHHHHHhcCCCcccCcHHHHcCC--CCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 78898888732 2256789999998 89999999999999999999999999999975 9999999999985
No 95
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.80 E-value=6.2e-09 Score=82.00 Aligned_cols=72 Identities=24% Similarity=0.264 Sum_probs=63.8
Q ss_pred cceEecccccC-------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhc
Q 028824 68 SGTLTANSAAP-------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (203)
Q Consensus 68 ~g~~~~~~l~~-------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~ 140 (203)
.|.++.+++.. .....+++++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..||+++
T Consensus 53 vGivt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~ 130 (184)
T 1pvm_A 53 VGLLSERSIIKRFIPRNKKPDEVPIRLVMRK--PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRY 130 (184)
T ss_dssp EEEEEHHHHHHHTGGGCCCGGGSBGGGTSBS--SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTT
T ss_pred EEEEeHHHHHHHHhhcccCcccCCHHHHhCC--CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 78888887732 2456789999998 89999999999999999999999999999988999999999999975
Q ss_pred h
Q 028824 141 D 141 (203)
Q Consensus 141 ~ 141 (203)
.
T Consensus 131 ~ 131 (184)
T 1pvm_A 131 L 131 (184)
T ss_dssp S
T ss_pred H
Confidence 4
No 96
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.79 E-value=6.3e-09 Score=79.26 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=62.1
Q ss_pred cceEecccccCC-------CCccccccccc------cCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEeh
Q 028824 68 SGTLTANSAAPS-------SGVYTVGDFMT------TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134 (203)
Q Consensus 68 ~g~~~~~~l~~~-------~~~~~V~diM~------~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~ 134 (203)
-|.++.+++... ....++.++|. + ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.
T Consensus 65 vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~ 142 (152)
T 2uv4_A 65 VDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSL 142 (152)
T ss_dssp EEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred EEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEH
Confidence 788888877321 23568999996 5 78999999999999999999999999999988999999999
Q ss_pred HHHhhch
Q 028824 135 YDLLALD 141 (203)
Q Consensus 135 ~Dll~~~ 141 (203)
.||+++.
T Consensus 143 ~dil~~l 149 (152)
T 2uv4_A 143 SDILQAL 149 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
No 97
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.79 E-value=5.4e-10 Score=102.17 Aligned_cols=102 Identities=24% Similarity=0.289 Sum_probs=3.4
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCccC--Cccc-
Q 028824 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP--EVDS- 159 (203)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~--~v~~- 159 (203)
.+++++|.. +++++++++++.+++++|.+++++.+||+| +|+++|+||.+||... ......+.++|.+ ++..
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~--~~~~~~V~~vMtp~~~~vtv 162 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVK--PNAGDTVAAIMTPKDKLVTA 162 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhc--cccCCcHHHHhccCCCCEEE
Confidence 357889998 899999999999999999999999999999 8999999999999742 2234567888883 2221
Q ss_pred --------hHHHH-----hhhc-eeeCCcEEEEEehhhHHHHHH
Q 028824 160 --------TWKVC-----EKCL-SFENYICLGSLSLKFLTFLLI 189 (203)
Q Consensus 160 --------~~~~~-----~~ll-v~~~g~lvGiVt~~DI~~~L~ 189 (203)
..+.+ ..++ ++++|+++|+||.+|+++...
T Consensus 163 ~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 163 REGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 11112 3344 456899999999999955443
No 98
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.78 E-value=6.3e-09 Score=88.34 Aligned_cols=72 Identities=15% Similarity=0.251 Sum_probs=66.8
Q ss_pred cceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++.......+++++|.+ +++++++++++.++++.|.++++..+||+|++|+++|+||..|+++..
T Consensus 186 vGivt~~dll~~~~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 186 VGVISLRDLIVNDDDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVI 257 (286)
T ss_dssp EEEEEHHHHTTSCTTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHcCCCCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 799999998766678899999998 899999999999999999999999999999999999999999999753
No 99
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.78 E-value=5.5e-09 Score=88.06 Aligned_cols=72 Identities=24% Similarity=0.391 Sum_probs=65.7
Q ss_pred cceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
-|.++.+++.......+++++|.+ +++++++++++.++++.|.++++..+||+|++|+++|+||..|+++..
T Consensus 184 vGivt~~dll~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i 255 (278)
T 2yvy_A 184 KGVLSLRDLIVADPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVL 255 (278)
T ss_dssp EEEEEHHHHHHSCTTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC
T ss_pred EEEEEHHHHhcCCCCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHH
Confidence 799998888555567899999988 899999999999999999999999999999999999999999999753
No 100
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.76 E-value=1.1e-08 Score=78.89 Aligned_cols=71 Identities=20% Similarity=0.327 Sum_probs=62.1
Q ss_pred cceEecccccC--------------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEe
Q 028824 68 SGTLTANSAAP--------------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133 (203)
Q Consensus 68 ~g~~~~~~l~~--------------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt 133 (203)
.|.++.+++.. .....+++++|.+ ++.++.+++++.+|++.|.+++++.+||+|+ |+++|+||
T Consensus 49 vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit 125 (160)
T 2o16_A 49 LGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIIT 125 (160)
T ss_dssp EEEEEHHHHHHHHHHHCC---------CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEEC
T ss_pred EEEEeHHHHHHHHHHhhcccccccchhcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEE
Confidence 78888887732 2356789999998 8999999999999999999999999999997 99999999
Q ss_pred hHHHhhch
Q 028824 134 DYDLLALD 141 (203)
Q Consensus 134 ~~Dll~~~ 141 (203)
..||+++.
T Consensus 126 ~~dil~~~ 133 (160)
T 2o16_A 126 DSDFVTIA 133 (160)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999753
No 101
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.75 E-value=4.7e-09 Score=86.29 Aligned_cols=58 Identities=28% Similarity=0.471 Sum_probs=50.4
Q ss_pred Cccccccccc-cCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhc
Q 028824 81 GVYTVGDFMT-TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (203)
Q Consensus 81 ~~~~V~diM~-~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~ 140 (203)
...+++++|+ + ++.++++++++.+|++.|.+++++.+||+|++|+++|+||.+|++++
T Consensus 183 ~~~~v~~im~~~--~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 183 QSLPVDYVMTKD--NLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLIST 241 (245)
T ss_dssp GGSBHHHHSBCT--TCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-----
T ss_pred cCCceeeEecCC--ccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhch
Confidence 4678999999 6 89999999999999999999999999999999999999999999865
No 102
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.75 E-value=1.7e-08 Score=75.10 Aligned_cols=72 Identities=26% Similarity=0.333 Sum_probs=63.1
Q ss_pred cceEeccccc-C-----CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAA-P-----SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~-~-----~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|.++.+++. . .....+++++|.+ ++.++.+++++.++++.|.+++++.+ |+|++|+++|+||..||++..
T Consensus 51 ~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~ 127 (138)
T 2yzi_A 51 VGFFTKSDIIRRVIVPGLPYDIPVERIMTR--NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEAS 127 (138)
T ss_dssp EEEEEHHHHHHHTTTTCCCTTSBGGGTCBC--SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHH
T ss_pred EEEEeHHHHHHHHHhcCCcccCCHHHHhhC--CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHH
Confidence 7889888773 1 1346789999998 89999999999999999999999999 999889999999999999764
Q ss_pred h
Q 028824 142 S 142 (203)
Q Consensus 142 ~ 142 (203)
.
T Consensus 128 ~ 128 (138)
T 2yzi_A 128 R 128 (138)
T ss_dssp H
T ss_pred H
Confidence 3
No 103
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.75 E-value=9.4e-09 Score=78.71 Aligned_cols=72 Identities=19% Similarity=0.299 Sum_probs=62.7
Q ss_pred cceEecccccC---------------------CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCC
Q 028824 68 SGTLTANSAAP---------------------SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW 126 (203)
Q Consensus 68 ~g~~~~~~l~~---------------------~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g 126 (203)
.|.++.+++.. .....+++++|.+ +.++++++++.+|++.|.+++++.+||+|++|
T Consensus 60 vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g 136 (157)
T 1o50_A 60 VGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKG 136 (157)
T ss_dssp EEEEEHHHHHHHHHHHHHCCCC-------CCCCCSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred EEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCC
Confidence 78888877632 3457789999986 88999999999999999999999999999889
Q ss_pred eEEEEEehHHHhhchh
Q 028824 127 KLVGLVSDYDLLALDS 142 (203)
Q Consensus 127 ~lvGiVt~~Dll~~~~ 142 (203)
+++|+||..||+++..
T Consensus 137 ~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 137 EIVGDLNSLEILLALW 152 (157)
T ss_dssp CEEEEEEHHHHHHHHH
T ss_pred EEEEEEEHHHHHHHHH
Confidence 9999999999997643
No 104
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.74 E-value=8.9e-09 Score=76.87 Aligned_cols=75 Identities=17% Similarity=0.231 Sum_probs=61.5
Q ss_pred cceEecccccCC-------CCccccccccccCC----CeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHH
Q 028824 68 SGTLTANSAAPS-------SGVYTVGDFMTTKE----ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 68 ~g~~~~~~l~~~-------~~~~~V~diM~~~~----~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~D 136 (203)
.|.++.+++... ....+++++|.+.. ++.++.+++++.++++.|.+++++.+||+|++|+++|+||..|
T Consensus 55 ~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~d 134 (144)
T 2nyc_A 55 INVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSD 134 (144)
T ss_dssp EEEEEHHHHHHHHHTC----CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred EEEEcHHHHHHHhcccccccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHH
Confidence 788888877321 23678999998521 4789999999999999999999999999998899999999999
Q ss_pred Hhhchh
Q 028824 137 LLALDS 142 (203)
Q Consensus 137 ll~~~~ 142 (203)
|++...
T Consensus 135 il~~l~ 140 (144)
T 2nyc_A 135 ILKYIL 140 (144)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997643
No 105
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.74 E-value=1e-08 Score=78.04 Aligned_cols=71 Identities=14% Similarity=0.235 Sum_probs=61.4
Q ss_pred cceEecccccCC-----------CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHH
Q 028824 68 SGTLTANSAAPS-----------SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 68 ~g~~~~~~l~~~-----------~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~D 136 (203)
.|.++..++... ....+++++|.+ ++.++.+++++.++++.|.++++ +||+|++|+++|+||..|
T Consensus 57 ~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~d 132 (157)
T 2emq_A 57 HGLISMTMMMDAILGLERIEFERLETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRRE 132 (157)
T ss_dssp EEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHH
T ss_pred EEEeeHHHHHHHHhcccccchHHhcCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHH
Confidence 788888776221 246789999998 89999999999999999999987 999998899999999999
Q ss_pred Hhhchh
Q 028824 137 LLALDS 142 (203)
Q Consensus 137 ll~~~~ 142 (203)
|+++..
T Consensus 133 il~~~~ 138 (157)
T 2emq_A 133 VLKQLN 138 (157)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997643
No 106
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.74 E-value=1.1e-08 Score=79.87 Aligned_cols=60 Identities=13% Similarity=0.229 Sum_probs=55.1
Q ss_pred CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
....+++++|.+ ++.++.+++++.+|++.|.+++++.+||+| +|+++|+||..||+++..
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 356789999998 899999999999999999999999999999 899999999999997643
No 107
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.73 E-value=4.7e-09 Score=80.07 Aligned_cols=71 Identities=23% Similarity=0.341 Sum_probs=61.7
Q ss_pred cceEecccccCCC----------CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHH
Q 028824 68 SGTLTANSAAPSS----------GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137 (203)
Q Consensus 68 ~g~~~~~~l~~~~----------~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dl 137 (203)
.|.++.+++.... ...+++++|.+ ++.++.+++++.+|++.|.+++ .+||+|++|+++|+||..||
T Consensus 61 ~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~di 136 (156)
T 3ctu_A 61 VGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp EEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHH
T ss_pred EEEEcHHHHHHHHHhccccccccccCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHH
Confidence 7889988874322 26789999998 8999999999999999999886 69999989999999999999
Q ss_pred hhchh
Q 028824 138 LALDS 142 (203)
Q Consensus 138 l~~~~ 142 (203)
+++..
T Consensus 137 l~~l~ 141 (156)
T 3ctu_A 137 LKAVN 141 (156)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98654
No 108
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.69 E-value=2e-09 Score=98.79 Aligned_cols=96 Identities=22% Similarity=0.170 Sum_probs=0.4
Q ss_pred cccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeC---CCeEEEEEehHHHhhchhhcCCCccccCccCCccchH--
Q 028824 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW-- 161 (203)
Q Consensus 87 diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~---~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~v~~~~-- 161 (203)
..|.. +++++.++.|+.|++++|.+++++.+||+|+ +++|+||||.+|+... ....++.++|++++.+..
T Consensus 142 ~g~i~--dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~---d~~~~V~evMT~~lvt~~~~ 216 (556)
T 4af0_A 142 NGFIT--DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ---DAETPIKSVMTTEVVTGSSP 216 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccC--CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc---ccceEhhhhcccceEEecCC
Confidence 35666 7999999999999999999999999999986 5799999999998742 345678899988654321
Q ss_pred ---H---------HHhhhc-eeeCCcEEEEEehhhHHHH
Q 028824 162 ---K---------VCEKCL-SFENYICLGSLSLKFLTFL 187 (203)
Q Consensus 162 ---~---------~~~~ll-v~~~g~lvGiVt~~DI~~~ 187 (203)
+ ..++++ ++++++++|+||.+|+.+.
T Consensus 217 ~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 217 ITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp ---------------------------------------
T ss_pred CCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhh
Confidence 1 123444 5578999999999999443
No 109
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.67 E-value=1.1e-08 Score=78.32 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=61.5
Q ss_pred cceEecccccCC-----------CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHH
Q 028824 68 SGTLTANSAAPS-----------SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 68 ~g~~~~~~l~~~-----------~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~D 136 (203)
.|.++.+++... ....+++++|.+ ++.++.+++++.++++.|.++++ +||+|++|+++|+||..|
T Consensus 60 vGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~d 135 (159)
T 1yav_A 60 HGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLT--DIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRV 135 (159)
T ss_dssp EEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSBC--SCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHH
T ss_pred EEEeEHHHHHHHhhhhcccchhhhccCCHHHhcCC--CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHH
Confidence 788888876321 356789999998 89999999999999999999887 999998899999999999
Q ss_pred Hhhchh
Q 028824 137 LLALDS 142 (203)
Q Consensus 137 ll~~~~ 142 (203)
|+++..
T Consensus 136 il~~~~ 141 (159)
T 1yav_A 136 VLKELN 141 (159)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997643
No 110
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.65 E-value=1.7e-08 Score=77.05 Aligned_cols=72 Identities=15% Similarity=0.105 Sum_probs=61.2
Q ss_pred cceEecccccCCC----------CccccccccccCCC------eEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEE
Q 028824 68 SGTLTANSAAPSS----------GVYTVGDFMTTKEE------LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131 (203)
Q Consensus 68 ~g~~~~~~l~~~~----------~~~~V~diM~~~~~------~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGi 131 (203)
.|.++.+++.... ...++.++|.+ + +.++.+++++.++++.|.+++++.+||+| +|+++|+
T Consensus 59 ~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Gi 135 (164)
T 2pfi_A 59 VGIVQRAQLVQALQAEPPSRAPGHQQCLQDILAR--GCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGC 135 (164)
T ss_dssp EEEEEHHHHHHHHHC-------CCCCBHHHHHHT--TCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEE
T ss_pred EEEEEHHHHHHHHHhhccccCCcccchhhhhhcc--cccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEE
Confidence 7888887773221 23579999987 5 78999999999999999999999999999 7999999
Q ss_pred EehHHHhhchh
Q 028824 132 VSDYDLLALDS 142 (203)
Q Consensus 132 Vt~~Dll~~~~ 142 (203)
||..||+++..
T Consensus 136 it~~dil~~~~ 146 (164)
T 2pfi_A 136 VSWVEMKKAIS 146 (164)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999997643
No 111
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.64 E-value=1.9e-08 Score=79.16 Aligned_cols=85 Identities=18% Similarity=0.072 Sum_probs=65.8
Q ss_pred ccccccccccCCccccccceEecccccCCC---CccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCe
Q 028824 51 TSSDRVSALRRSSAVFASGTLTANSAAPSS---GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127 (203)
Q Consensus 51 ~~~~~~~~~r~~~~~~~~g~~~~~~l~~~~---~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~ 127 (203)
++..||... ..... .|+++.+++.... ...+++ +| + ++.++++++++.+|++.|.+++++.+||+|++|+
T Consensus 69 ~~~~pVvd~--~~~~l-vGivt~~Dl~~~~~~~~~~~v~-~~-~--~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~ 141 (173)
T 3ocm_A 69 HSFFPVCRG--SLDEV-VGIGRAKDLVADLITEGRVRRN-RL-R--DPIIVHESIGILRLMDTLKRSRGQLVLVADEFGA 141 (173)
T ss_dssp CSEEEEESS--STTSE-EEEEEHHHHHHHHHHHSSCCGG-GS-B--CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCC
T ss_pred CCEEEEEeC--CCCCE-EEEEEHHHHHHHHhcCCcchhH-hc-C--CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 344555431 11234 7999988874321 356777 44 5 6899999999999999999999999999999999
Q ss_pred EEEEEehHHHhhchh
Q 028824 128 LVGLVSDYDLLALDS 142 (203)
Q Consensus 128 lvGiVt~~Dll~~~~ 142 (203)
++|+||..||++...
T Consensus 142 lvGiIT~~Dil~~l~ 156 (173)
T 3ocm_A 142 IEGLVTPIDVFEAIA 156 (173)
T ss_dssp EEEEECHHHHHHHHH
T ss_pred EEEEEeHHHHHHHHh
Confidence 999999999997643
No 112
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.63 E-value=2.7e-08 Score=90.39 Aligned_cols=84 Identities=21% Similarity=0.311 Sum_probs=70.9
Q ss_pred ccccccccccCCccccccceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEE
Q 028824 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130 (203)
Q Consensus 51 ~~~~~~~~~r~~~~~~~~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvG 130 (203)
++..+|... .... -|.++.+++.....+.+++++|++ ++++++++++++++++.|.++++..+||+|++|+++|
T Consensus 191 ~~~ipVvd~---~~~l-vGiVt~~Dll~~~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvG 264 (473)
T 2zy9_A 191 IYYIYVVDE---KGRL-KGVLSLRDLIVADPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVG 264 (473)
T ss_dssp EEEEEEECT---TSBE-EEEEEHHHHHHSCTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred eeEEEEECC---CCcE-EEEEEHHHHhcCCCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEE
Confidence 344555543 1234 799999988555567899999988 8999999999999999999999999999999999999
Q ss_pred EEehHHHhhc
Q 028824 131 LVSDYDLLAL 140 (203)
Q Consensus 131 iVt~~Dll~~ 140 (203)
+||.+|+++.
T Consensus 265 iIT~~Dil~~ 274 (473)
T 2zy9_A 265 IVTVDDVLDV 274 (473)
T ss_dssp EEEHHHHHHH
T ss_pred EEehHhhHHH
Confidence 9999999975
No 113
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.61 E-value=1.9e-09 Score=98.73 Aligned_cols=102 Identities=21% Similarity=0.223 Sum_probs=44.5
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeC---CCeEEEEEehHHHhhchhhcCCCccccCccC--Cc
Q 028824 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSMFP--EV 157 (203)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~---~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~--~v 157 (203)
.+++++|.+ +++++.+++++.+|+++|.+++++.+||+|+ +|+++|+||.+|+...........+.++|.+ ++
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp HTCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 357899998 8999999999999999999999999999997 5899999999999864221234467777876 43
Q ss_pred cc---------hHHHH-----hhhcee-eCCcEEEEEehhhHHH
Q 028824 158 DS---------TWKVC-----EKCLSF-ENYICLGSLSLKFLTF 186 (203)
Q Consensus 158 ~~---------~~~~~-----~~llv~-~~g~lvGiVt~~DI~~ 186 (203)
.. ..+.+ ..+++. ++|+++|+||++|++.
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~ 229 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKK 229 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSS
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHH
Confidence 21 11222 345544 5899999999999943
No 114
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.55 E-value=1e-08 Score=94.08 Aligned_cols=90 Identities=21% Similarity=0.283 Sum_probs=0.0
Q ss_pred ccccccccccccCCccccccceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeE
Q 028824 49 LATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (203)
Q Consensus 49 ~~~~~~~~~~~r~~~~~~~~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~l 128 (203)
..+|..||...-...... .|+++.++++......+|+++|++ ++++++++.+++||.++|.++++..+||+|++|+|
T Consensus 167 ~~isgvpVvd~g~~~~kL-vGIvT~RD~rf~d~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~L 243 (556)
T 4af0_A 167 FGFCGVPITETGEPDSKL-LGIVTGRDVQFQDAETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHL 243 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hCCCccccccccCcCCEE-EEEEecccccccccceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcE
Confidence 456677776432222234 799999999777778899999998 89999999999999999999999999999999999
Q ss_pred EEEEehHHHhhch
Q 028824 129 VGLVSDYDLLALD 141 (203)
Q Consensus 129 vGiVt~~Dll~~~ 141 (203)
+|+||.+|+.+..
T Consensus 244 vGlIT~kDi~k~~ 256 (556)
T 4af0_A 244 VSLVARSDLLKNQ 256 (556)
T ss_dssp -------------
T ss_pred EEEEEechhhhhh
Confidence 9999999999754
No 115
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.50 E-value=1.4e-08 Score=92.54 Aligned_cols=98 Identities=23% Similarity=0.323 Sum_probs=1.6
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchhhcCCCccccCccCCccc----
Q 028824 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS---- 159 (203)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~~~v~~~m~~~v~~---- 159 (203)
.+.++|.. ++.++.+++++.++++.|.+++++.+||+|+ ++++|+|+.+||+. .....+.++|.+++..
T Consensus 94 ~~~~~m~~--~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~----~~~~~v~~im~~~~~~v~~~ 166 (486)
T 2cu0_A 94 RAERLIVE--DVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA----REGKLVKELMTKEVITVPES 166 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhcccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc----CCCCCHHHHccCCCeEECCc
Confidence 45678988 8999999999999999999999999999997 99999999999985 2344677777754321
Q ss_pred -----hHHHH-----hhhce-eeCCcEEEEEehhhHHHHH
Q 028824 160 -----TWKVC-----EKCLS-FENYICLGSLSLKFLTFLL 188 (203)
Q Consensus 160 -----~~~~~-----~~llv-~~~g~lvGiVt~~DI~~~L 188 (203)
..+.+ ..+++ +++|+++|+||.+|++..+
T Consensus 167 ~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 167 IEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp ----------------------------------------
T ss_pred CcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhh
Confidence 11112 23444 4579999999999995543
No 116
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.48 E-value=1.2e-07 Score=88.92 Aligned_cols=54 Identities=20% Similarity=0.023 Sum_probs=50.1
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 85 V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
++++|++ ++.++++++++.|+++.|.+++++.+||+ ++|+++|+||.+|+++..
T Consensus 570 v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~ 623 (632)
T 3org_A 570 LVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGY 623 (632)
T ss_dssp -CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECC
T ss_pred cchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHH
Confidence 7889999 89999999999999999999999999999 689999999999998754
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.40 E-value=3.2e-07 Score=84.23 Aligned_cols=74 Identities=27% Similarity=0.343 Sum_probs=65.9
Q ss_pred cceEeccccc-CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~-~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|+++.+++. ......+++++|++ ++++++++++++.+++++|.++++..+||+|++|+++|+||.+||++...
T Consensus 159 vGiVt~rDl~~~~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~ 233 (511)
T 3usb_A 159 VGIITNRDMRFIQDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIE 233 (511)
T ss_dssp EEEEEHHHHTTCCCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEEEEehHhhhhccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhh
Confidence 7899988884 34567889999995 36899999999999999999999999999999999999999999997654
No 118
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.34 E-value=5.6e-08 Score=89.00 Aligned_cols=75 Identities=28% Similarity=0.315 Sum_probs=0.0
Q ss_pred cceEeccccc--CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~--~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|+++.+++. ......+|+++|++.++++++++++++.+|+++|.+++++.+||+|++|+++|+||.+||++...
T Consensus 144 vGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 144 LGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred EEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhh
Confidence 6888888885 34566789999998223999999999999999999999999999999999999999999997643
No 119
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.31 E-value=5.6e-07 Score=75.39 Aligned_cols=53 Identities=15% Similarity=0.045 Sum_probs=49.4
Q ss_pred cccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 87 diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.+|.+ .++++.+++++.++..+|...+++++||++ +|+|+||||.+||+++..
T Consensus 193 ~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp SCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 47998 899999999999999999999999999998 699999999999998754
No 120
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.30 E-value=7.9e-08 Score=87.79 Aligned_cols=74 Identities=28% Similarity=0.364 Sum_probs=0.0
Q ss_pred cceEeccccc-CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~-~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
-|+++.+++. ......+|+++|+++++++++++++++.+++++|.++++..+||+|++|+++|+||.+|+++..
T Consensus 131 vGIVt~rDl~~~~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 131 VGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred EEEEEhHHhhhccccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 7888888884 3456678999999432489999999999999999999999999999999999999999999764
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.25 E-value=1.2e-07 Score=86.78 Aligned_cols=74 Identities=26% Similarity=0.377 Sum_probs=54.1
Q ss_pred cceEeccccc-CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~-~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
-|+++.+++. ......+++++|+++++++++++++++.+++++|.++++..+||+|++|+++|+||.+||++..
T Consensus 133 vGiVt~rDL~~~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 133 VGIITGRDVRFVTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp EEEEEHHHHTTCCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred EEEEEHHHHhhcccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 7899999984 4456788999999332489999999999999999999999999999999999999999999753
No 122
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.23 E-value=1.1e-06 Score=80.57 Aligned_cols=86 Identities=7% Similarity=0.062 Sum_probs=67.5
Q ss_pred ccccccccccCCccccccceEeccccc------CCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeC
Q 028824 51 TSSDRVSALRRSSAVFASGTLTANSAA------PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124 (203)
Q Consensus 51 ~~~~~~~~~r~~~~~~~~g~~~~~~l~------~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~ 124 (203)
++..||... +.... .|.++.+++. ......+|+++|++ +++++.+++++.+++++|.++++ +||+|+
T Consensus 416 ~~~lpVvd~--~~g~l-vGiVt~~Dll~~l~~~~~~~~~~V~~im~~--~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~ 488 (527)
T 3pc3_A 416 VDQLPVVDQ--DDGSV-LGVVGQETLITQIVSMNRQQSDPAIKALNK--RVIRLNESEILGKLARVLEVDPS--VLILGK 488 (527)
T ss_dssp CSEEEEECT--TTCCE-EEEEEHHHHHHHHHHHCCCTTSBGGGGEET--TCCEEETTSBHHHHHHHHTTCSE--EEEEEE
T ss_pred CCeEEEEEC--CCCEE-EEEEEHHHHHHHHHhccCcCCCcHHHHhcC--CCeEECCCCcHHHHHHHHhhCCE--EEEEeC
Confidence 444555541 12234 7999988884 34556799999998 89999999999999999987765 799998
Q ss_pred C----CeEEEEEehHHHhhchhh
Q 028824 125 D----WKLVGLVSDYDLLALDSI 143 (203)
Q Consensus 125 ~----g~lvGiVt~~Dll~~~~~ 143 (203)
+ |+++||||..||+++...
T Consensus 489 ~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 489 NPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp CSSSCEEEEEEEEHHHHHHHHHT
T ss_pred CcccCCeEEEEEEHHHHHHHHHh
Confidence 4 899999999999987543
No 123
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.17 E-value=2.8e-06 Score=77.03 Aligned_cols=74 Identities=26% Similarity=0.339 Sum_probs=63.5
Q ss_pred cceEecccccC-CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~~-~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|.++.+++.. .....+++++|++. +++++++++++.++++.|.++++..+||+|++|+++|+||.+||++...
T Consensus 136 vGivt~~Dl~~~~~~~~~v~~im~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 136 VGIITNRDMRFISDYNAPISEHMTSE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp EEEEEHHHHHHCSCSSSBTTTSCCCS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEEEEHHHHhhhccCCCcHHHHcCCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 68888887732 23567899999852 4789999999999999999999999999999999999999999997644
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.10 E-value=3.8e-07 Score=83.01 Aligned_cols=72 Identities=38% Similarity=0.539 Sum_probs=0.4
Q ss_pred cceEecccccCCCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhchh
Q 028824 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (203)
Q Consensus 68 ~g~~~~~~l~~~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~~ 142 (203)
.|+++.+++.. ....+++++|++ +++++++++++.++++.|.+++++.+||+|++|+++|+||.+||++...
T Consensus 136 vGivt~~Dl~~-~~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 136 VGIITKKDIAA-REGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp --------------------------------------------------------------------------C
T ss_pred EEEEEHHHhcc-CCCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 67787777754 456789999998 8999999999999999999999999999999999999999999997643
No 125
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.10 E-value=3.5e-07 Score=83.17 Aligned_cols=74 Identities=32% Similarity=0.488 Sum_probs=3.8
Q ss_pred cceEecccccC-CCCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~-~~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|+++.+++.. .....+++++|++.+++.++.+++++.++++.|.++++..+||+|++|+++|+||.+|+++..
T Consensus 139 vGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 139 VGLLTNRDVRFEKNLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVI 213 (494)
T ss_dssp ----------------------------------------------------------------------CHHHH
T ss_pred EEEEEHHHHHhhcCCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhh
Confidence 67787777732 234578999998544689999999999999999999999999999999999999999999764
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.97 E-value=3.7e-07 Score=83.56 Aligned_cols=74 Identities=26% Similarity=0.306 Sum_probs=51.0
Q ss_pred cceEecccccCC---CCccccccccccCCCeEEEcCCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhch
Q 028824 68 SGTLTANSAAPS---SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (203)
Q Consensus 68 ~g~~~~~~l~~~---~~~~~V~diM~~~~~~~~v~~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~~ 141 (203)
.|+++.+++... ....+++++|++.++++++.+++++.+++++|.++++..+||+|++|+++|+||.+||++..
T Consensus 155 vGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 155 VGIVTSRDIDFLAEKDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp CCEECTTTTC----------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred EEEEEHHHHHhhhhccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 788888887442 35678999998644689999999999999999999999999999999999999999999764
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=90.11 E-value=0.24 Score=32.64 Aligned_cols=21 Identities=14% Similarity=0.151 Sum_probs=18.2
Q ss_pred hhhceeeCCcEEEEEehhhHH
Q 028824 165 EKCLSFENYICLGSLSLKFLT 185 (203)
Q Consensus 165 ~~llv~~~g~lvGiVt~~DI~ 185 (203)
..+++.++|+++|++|..|++
T Consensus 24 ~~~~V~d~~~lvGIvT~~Di~ 44 (70)
T 3ghd_A 24 GSAVVMEGDEILGVVTERDIL 44 (70)
T ss_dssp SEEEEEETTEEEEEEEHHHHH
T ss_pred CEEEEEECCEEEEEEEHHHHH
Confidence 457788899999999999993
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=84.36 E-value=0.84 Score=28.75 Aligned_cols=23 Identities=13% Similarity=0.043 Sum_probs=18.0
Q ss_pred hhhceeeCCcEEEEEehhhHHHH
Q 028824 165 EKCLSFENYICLGSLSLKFLTFL 187 (203)
Q Consensus 165 ~~llv~~~g~lvGiVt~~DI~~~ 187 (203)
..+++.++|+++|+|+.+|++..
T Consensus 24 ~~~pV~d~~~l~Givt~~dl~~~ 46 (70)
T 3fio_A 24 GSAVVMEGDEILGVVTERDILDK 46 (70)
T ss_dssp SEEEEEETTEEEEEEEHHHHHHH
T ss_pred CEEEEEECCEEEEEEEHHHHHHH
Confidence 34667677999999999999443
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=64.04 E-value=8.4 Score=26.13 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=24.5
Q ss_pred CcEEEEEeCCCeEEEEEehHHHhhchhhcCC
Q 028824 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146 (203)
Q Consensus 116 ~~~lPVvd~~g~lvGiVt~~Dll~~~~~~~~ 146 (203)
...+=|+|++|+.+|+++..+-++.....+.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~L 43 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRNL 43 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcCC
Confidence 4557789999999999999999976554443
No 130
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=44.34 E-value=18 Score=27.31 Aligned_cols=35 Identities=17% Similarity=0.409 Sum_probs=28.1
Q ss_pred HHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhh
Q 028824 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139 (203)
Q Consensus 104 i~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~ 139 (203)
+.+.++.+.+.+..-+.|-. +|+++|+|...|.++
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCCC
Confidence 67777788888887777765 699999999988653
No 131
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=40.45 E-value=20 Score=25.48 Aligned_cols=20 Identities=30% Similarity=0.292 Sum_probs=15.7
Q ss_pred EEEEEeCCCeEEEEEehHHH
Q 028824 118 GFPVIDDDWKLVGLVSDYDL 137 (203)
Q Consensus 118 ~lPVvd~~g~lvGiVt~~Dl 137 (203)
..||.|++|+++|+|...-.
T Consensus 105 ~~PV~~~~g~viGvv~vg~~ 124 (131)
T 1p0z_A 105 KSPIQDATGKVIGIVSVGYT 124 (131)
T ss_dssp EEEEECTTCCEEEEEEEEEE
T ss_pred EEeEECCCCCEEEEEEEEEE
Confidence 35898878999999986543
No 132
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=39.62 E-value=21 Score=25.94 Aligned_cols=21 Identities=29% Similarity=0.294 Sum_probs=16.2
Q ss_pred EEEEEeCCCeEEEEEehHHHh
Q 028824 118 GFPVIDDDWKLVGLVSDYDLL 138 (203)
Q Consensus 118 ~lPVvd~~g~lvGiVt~~Dll 138 (203)
..||.|++|+++|+|+..-.+
T Consensus 110 ~~PV~~~~g~viGvv~vg~~~ 130 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIGLEL 130 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEH
T ss_pred EEeEEcCCCCEEEEEEEeEEH
Confidence 358988789999999865443
No 133
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=35.69 E-value=21 Score=26.27 Aligned_cols=18 Identities=22% Similarity=0.248 Sum_probs=14.9
Q ss_pred CcEEEEEeCCCeEEEEEe
Q 028824 116 ITGFPVIDDDWKLVGLVS 133 (203)
Q Consensus 116 ~~~lPVvd~~g~lvGiVt 133 (203)
+...||.|++|+++|+|.
T Consensus 108 v~~~Pi~d~~G~~~G~ve 125 (151)
T 2qkp_A 108 VTYAAVRDQAGDFQGVLE 125 (151)
T ss_dssp EEEEEEECTTCCEEEEEE
T ss_pred EEEEEEECCCCCEEEEEE
Confidence 457899998899999884
No 134
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=34.22 E-value=22 Score=28.21 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=17.6
Q ss_pred CCcEEEEEeCCCeEEEEEehH
Q 028824 115 RITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 115 ~~~~lPVvd~~g~lvGiVt~~ 135 (203)
+-++=||+|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 667779999889999999853
No 135
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=32.84 E-value=25 Score=26.65 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=19.3
Q ss_pred HHCCCcEEEEEeCCCeEEEEEeh
Q 028824 112 VEKRITGFPVIDDDWKLVGLVSD 134 (203)
Q Consensus 112 ~~~~~~~lPVvd~~g~lvGiVt~ 134 (203)
...+-++=||+|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 34577889999999999999974
No 136
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=32.26 E-value=23 Score=28.09 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=18.0
Q ss_pred CCCcEEEEEeCCCeEEEEEeh
Q 028824 114 KRITGFPVIDDDWKLVGLVSD 134 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~ 134 (203)
.+-++=||+|.+|+++||++.
T Consensus 173 ~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 173 HGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp TTCTTCEEECTTCCEEEEECC
T ss_pred CCCchHHeeCCCCeEEEEEee
Confidence 466778999989999999976
No 137
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=31.05 E-value=26 Score=27.56 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=18.3
Q ss_pred CCCcEEEEEeCCCeEEEEEehH
Q 028824 114 KRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.+-++=|++|.+|+++||++..
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFGA 201 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEee
Confidence 4677889999889999999763
No 138
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=30.72 E-value=25 Score=27.16 Aligned_cols=22 Identities=23% Similarity=0.427 Sum_probs=18.1
Q ss_pred CCCcEEEEEeCCCeEEEEEehH
Q 028824 114 KRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.+-++=|+++.+|+++||++..
T Consensus 155 ~GdSGGPlv~~~g~lvGI~s~g 176 (210)
T 2as9_A 155 PGNSGSPVLNSNNEVIGVVYGG 176 (210)
T ss_dssp TTCTTCEEECTTSCEEEEECCS
T ss_pred CCCccCcEECCCCeEEEEEecc
Confidence 4667789998789999999874
No 139
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=29.65 E-value=29 Score=26.24 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=18.1
Q ss_pred CCCcEEEEEeCCCeEEEEEehH
Q 028824 114 KRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.+-++=|+++.+|+++||++..
T Consensus 151 ~GdSGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCCccCeEECcCCEEEEEEecc
Confidence 4667779998789999999974
No 140
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=29.54 E-value=29 Score=27.99 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=18.1
Q ss_pred CCCcEEEEEeCCCeEEEEEeh
Q 028824 114 KRITGFPVIDDDWKLVGLVSD 134 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~ 134 (203)
.+-++=|++|.+|+++||++.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 467788999989999999885
No 141
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=29.29 E-value=30 Score=27.84 Aligned_cols=26 Identities=27% Similarity=0.319 Sum_probs=19.1
Q ss_pred CCCcEEEEEeCCCeEEEEEehHHHhh
Q 028824 114 KRITGFPVIDDDWKLVGLVSDYDLLA 139 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~Dll~ 139 (203)
-+-+.=||+|.+|+++||-+..|=..
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCcc
Confidence 46778899999999999999988664
No 142
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=28.29 E-value=32 Score=25.90 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=17.3
Q ss_pred CCcEEEEEeCCCeEEEEEehH
Q 028824 115 RITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 115 ~~~~lPVvd~~g~lvGiVt~~ 135 (203)
+-++=|+++.+|+++||++..
T Consensus 155 GdSGGPl~~~~g~lvGI~s~g 175 (204)
T 2vid_A 155 GNSGSPVLNSNNELVGIHFAS 175 (204)
T ss_dssp GGTTCEEECTTSCEEEEEEEE
T ss_pred CCccCcEECCCCeEEEEEecC
Confidence 456679998789999999875
No 143
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=25.90 E-value=37 Score=26.85 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=18.0
Q ss_pred CCCcEEEEEeCCCeEEEEEehH
Q 028824 114 KRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.+-++=|+++.+|+++||++..
T Consensus 183 ~GdSGGPlv~~~g~lvGI~s~g 204 (246)
T 1qtf_A 183 VGNSGSGIFNLKGELIGIHSGK 204 (246)
T ss_dssp GGGTTCEEECTTCCEEEEEEEE
T ss_pred CCCchhheECCCCEEEEEEecc
Confidence 4556779998789999999975
No 144
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=24.03 E-value=1.1e+02 Score=20.71 Aligned_cols=36 Identities=11% Similarity=-0.050 Sum_probs=19.6
Q ss_pred CCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEehHH
Q 028824 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 101 ~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~D 136 (203)
..+.....+.+.......+.+.+++|+++|++....
T Consensus 39 ~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~~~~ 74 (164)
T 4e0a_A 39 TLNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVIHL 74 (164)
T ss_dssp SSCHHHHHHHHHCSSEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCceEEEEEECCCCcEEEEEEEEe
Confidence 344455555554333333333343349999998754
No 145
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=23.93 E-value=44 Score=26.18 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=17.6
Q ss_pred CCCcEEEEEeCCCeEEEEEehH
Q 028824 114 KRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.+-++=|+++.+|+++||++..
T Consensus 192 ~GdSGGPl~~~~g~lvGI~s~g 213 (242)
T 1agj_A 192 PGNSGSGIFNSNGELVGIHSSK 213 (242)
T ss_dssp GGGTTCEEECTTSEEEEEEEEE
T ss_pred CCCCchHhcccCCEEEEEEecc
Confidence 3556779998789999999974
No 146
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=23.89 E-value=38 Score=21.23 Aligned_cols=34 Identities=18% Similarity=-0.007 Sum_probs=23.6
Q ss_pred HHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhhc
Q 028824 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (203)
Q Consensus 107 a~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~~ 140 (203)
..+.+.+.++..+|++-.+|+.+|-.+..+|...
T Consensus 39 ~~~~~~~~g~~~vP~~~~~g~~~~g~~~~~l~~~ 72 (81)
T 1h75_A 39 AAEALRAQGFRQLPVVIAGDLSWSGFRPDMINRL 72 (81)
T ss_dssp HHHHHHHTTCCSSCEEEETTEEEESCCHHHHGGG
T ss_pred HHHHHHHhCCCccCEEEECCEEEecCCHHHHHHH
Confidence 4455556788888987557887776777766554
No 147
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=23.71 E-value=1.2e+02 Score=20.31 Aligned_cols=24 Identities=13% Similarity=0.093 Sum_probs=16.0
Q ss_pred HCCCcEEEEEeCCCeEEEEEehHH
Q 028824 113 EKRITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 113 ~~~~~~lPVvd~~g~lvGiVt~~D 136 (203)
......+.|...+|+++|++....
T Consensus 47 ~~~~~~~~v~~~~~~~vG~~~~~~ 70 (150)
T 3t9y_A 47 NHDDYFLLLLIKENKIIGLSGMCK 70 (150)
T ss_dssp TSTTEEEEEEEETTEEEEEEEEEE
T ss_pred cCCceEEEEEEECCEEEEEEEEEE
Confidence 334445556666899999997643
No 148
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=23.26 E-value=1.8e+02 Score=20.39 Aligned_cols=25 Identities=16% Similarity=0.073 Sum_probs=16.0
Q ss_pred CCcEEEEEeCCCeEEE--EE-ehHHHhh
Q 028824 115 RITGFPVIDDDWKLVG--LV-SDYDLLA 139 (203)
Q Consensus 115 ~~~~lPVvd~~g~lvG--iV-t~~Dll~ 139 (203)
++..+.|+|.+|+++. .+ +..++..
T Consensus 130 ~~P~~~lid~~G~i~~~g~~~~~~~l~~ 157 (165)
T 3ha9_A 130 SIDYIVIMDKSSNVLYAGTTPSLGELES 157 (165)
T ss_dssp SSSEEEEEETTCCEEEEEESCCHHHHHH
T ss_pred CceEEEEEcCCCcEEEeCCCCCHHHHHH
Confidence 4567778888887764 44 4555543
No 149
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Probab=23.13 E-value=1.3e+02 Score=20.23 Aligned_cols=23 Identities=0% Similarity=-0.019 Sum_probs=15.4
Q ss_pred HCCCcEEEEEeCCCeEEEEEehH
Q 028824 113 EKRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 113 ~~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
..+...+.|..++|+++|++...
T Consensus 47 ~~~~~~~~v~~~~~~ivG~~~~~ 69 (157)
T 3mgd_A 47 ANNLLVEWIAEENNQIIATAAIA 69 (157)
T ss_dssp HTTSEEEEEEEETTEEEEEEEEE
T ss_pred cCCceEEEEEEECCEEEEEEEEE
Confidence 34444455555589999998764
No 150
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=22.85 E-value=46 Score=20.24 Aligned_cols=33 Identities=12% Similarity=0.028 Sum_probs=21.9
Q ss_pred HHHHHHHCCCcEEEEEeCCCeEEEEEehHHHhh
Q 028824 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139 (203)
Q Consensus 107 a~~~m~~~~~~~lPVvd~~g~lvGiVt~~Dll~ 139 (203)
..+.+...++..+|++-.+|+.+|=.+..++.+
T Consensus 39 ~~~~~~~~~~~~vP~l~~~g~~~~g~~~~~l~~ 71 (75)
T 1r7h_A 39 ARDYVMALGYVQAPVVEVDGEHWSGFRPERIKQ 71 (75)
T ss_dssp HHHHHHHTTCBCCCEEEETTEEEESCCHHHHHH
T ss_pred HHHHHHHcCCCccCEEEECCeEEcCCCHHHHHH
Confidence 444556788889998755677665456666544
No 151
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=22.37 E-value=44 Score=26.63 Aligned_cols=22 Identities=14% Similarity=0.294 Sum_probs=17.8
Q ss_pred CCCcEEEEEeCCCeEEEEEehH
Q 028824 114 KRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.+-++=|++|.+|+++||++..
T Consensus 180 ~G~SGGPLv~~~G~vvGI~s~~ 201 (239)
T 1l1j_A 180 PGNSGGPLLNIHGEVIGINTAI 201 (239)
T ss_dssp TTTTTSEEECSSSEEEEEECCC
T ss_pred CCCccHHhccCCCeEEEEEeee
Confidence 4556779999889999999863
No 152
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=21.79 E-value=1.4e+02 Score=20.48 Aligned_cols=27 Identities=11% Similarity=-0.006 Sum_probs=16.9
Q ss_pred HHHHHCCCcEEEEEeCCCeEEEEEehH
Q 028824 109 EILVEKRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 109 ~~m~~~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
+.+.+..-..+.|...+|+++|++...
T Consensus 43 ~~~~~~~~~~~~v~~~~~~~vG~~~~~ 69 (150)
T 2dxq_A 43 AAMLAQPGLTIFVATENGKPVATATLL 69 (150)
T ss_dssp HHHHHSTTEEEEEEEETTEEEEEEEEE
T ss_pred HHHhcCCCceEEEEecCCEEEEEEEEE
Confidence 333343334455655678999999864
No 153
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=21.65 E-value=51 Score=27.46 Aligned_cols=20 Identities=20% Similarity=0.341 Sum_probs=17.0
Q ss_pred CCcEEEEEeCCCeEEEEEeh
Q 028824 115 RITGFPVIDDDWKLVGLVSD 134 (203)
Q Consensus 115 ~~~~lPVvd~~g~lvGiVt~ 134 (203)
+-++=|++|.+|+++||++.
T Consensus 170 G~SGGPlv~~~G~vvGI~s~ 189 (332)
T 3num_A 170 GNAGGPLVNLDGEVIGINTL 189 (332)
T ss_dssp TTTTSEEEETTSCEEEEEEE
T ss_pred CCcHHHhhCCCCcEEEEEee
Confidence 56677999988999999975
No 154
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=21.22 E-value=1.4e+02 Score=19.18 Aligned_cols=35 Identities=17% Similarity=0.043 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEeh
Q 028824 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134 (203)
Q Consensus 100 ~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~ 134 (203)
.-++++||+..|...+...+.-.|.+..-+-+|-.
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~~nVVYR 45 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYK 45 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTEEEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCCEEEEEE
Confidence 35889999999999999988888866444555544
No 155
>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*
Probab=21.21 E-value=1.3e+02 Score=20.89 Aligned_cols=23 Identities=9% Similarity=0.255 Sum_probs=16.3
Q ss_pred HCCCcEEEEEeCCCeEEEEEehH
Q 028824 113 EKRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 113 ~~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
..+...+.|.+++|+++|++...
T Consensus 43 ~~~~~~~~~~~~~~~~vG~~~~~ 65 (160)
T 1qst_A 43 DRHHESMVILKNKQKVIGGICFR 65 (160)
T ss_dssp SSSEEEEEEEETTTEEEEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEEEE
Confidence 33445566677788999999864
No 156
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1
Probab=21.11 E-value=1.4e+02 Score=20.36 Aligned_cols=32 Identities=19% Similarity=0.130 Sum_probs=19.8
Q ss_pred HHHHHHHHHCCCcEEEEEeCCCeEEEEEehHH
Q 028824 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136 (203)
Q Consensus 105 ~ea~~~m~~~~~~~lPVvd~~g~lvGiVt~~D 136 (203)
.+.++.+.+.....+.|..++|+++|++....
T Consensus 64 ~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~ 95 (168)
T 1bo4_A 64 SDYLGNLLRSKTFIALAAFDQEAVVGALAAYV 95 (168)
T ss_dssp HHHHHHHHHSSSEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEEECCeEEEEEEEEe
Confidence 34444444554444555555799999998653
No 157
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=20.64 E-value=1.6e+02 Score=19.49 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=14.4
Q ss_pred CCcEEEEEeC--CCeEEEEEehH
Q 028824 115 RITGFPVIDD--DWKLVGLVSDY 135 (203)
Q Consensus 115 ~~~~lPVvd~--~g~lvGiVt~~ 135 (203)
+-..+.|..+ +|+++|++...
T Consensus 45 ~~~~~~v~~~~~~~~~vG~~~~~ 67 (153)
T 2eui_A 45 KESVIYLALADEEDRLLGFCQLY 67 (153)
T ss_dssp TCSEEEEEECSSSCCEEEEEEEE
T ss_pred CCCeEEEEEecCCCcEEEEEEEE
Confidence 3344455555 79999999874
No 158
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=20.56 E-value=55 Score=27.21 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=18.1
Q ss_pred CCCcEEEEEeCCCeEEEEEehH
Q 028824 114 KRITGFPVIDDDWKLVGLVSDY 135 (203)
Q Consensus 114 ~~~~~lPVvd~~g~lvGiVt~~ 135 (203)
.+-++=|++|.+|+++||++..
T Consensus 170 ~G~SGGPl~~~~G~vVGI~s~~ 191 (325)
T 1lcy_A 170 FGNAGGPLVNLDGEVIGVNTMK 191 (325)
T ss_dssp TTTTTSEEEETTSCEEEEEEEE
T ss_pred CCCccccEECCCCEEEEEEeEe
Confidence 4567789999899999998853
No 159
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=20.09 E-value=1.4e+02 Score=18.55 Aligned_cols=34 Identities=12% Similarity=-0.009 Sum_probs=25.4
Q ss_pred CCCCHHHHHHHHHHCCCcEEEEEeCCCeEEEEEe
Q 028824 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133 (203)
Q Consensus 100 ~~~ti~ea~~~m~~~~~~~lPVvd~~g~lvGiVt 133 (203)
.-++++||+..|...+...+.-.|.+..=+-+|-
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~t~~~nVvY 44 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVY 44 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEEE
Confidence 4589999999999999998888886533344443
Done!