BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028830
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3UDK1|TRAD1_MOUSE TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus
GN=Trafd1 PE=1 SV=1
Length = 580
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
D+ +++C +C + IP N +H HC RN+ C VC + P+ + H H V C +
Sbjct: 7 DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-K 65
Query: 66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRL 125
C++ +E+ L H CP R+ C C+ L V L EH++ CG RTELC C R + +
Sbjct: 66 CNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLV 125
Query: 126 RERYNHESRCTGVPE 140
+E H C V E
Sbjct: 126 KELKTHPEVCGRVEE 140
>sp|Q99MM4|TRAD1_RAT TRAF-type zinc finger domain-containing protein 1 OS=Rattus
norvegicus GN=Trafd1 PE=2 SV=2
Length = 576
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
D+ ++C +C + IP N +H HC RN+ C VC + P+ + H H V C +
Sbjct: 7 DQAARLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-K 65
Query: 66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRL 125
C++ +E+ L H CP R+ C C+ L V L EH++ CG RTELC C R + +
Sbjct: 66 CNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLV 125
Query: 126 RERYNHESRCTGVPE 140
+E H + C V E
Sbjct: 126 KELQTHPAVCGRVEE 140
>sp|Q6GPH4|XAF1_HUMAN XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1
Length = 301
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 11 ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETM 70
+C +C R + S+N LH A+C R L C C + VP++ EEH H V C+ C ++M
Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSM 66
Query: 71 EREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYN 130
++ L HK C +R V C FC+ + L H+ CG+RTELC C ++I R
Sbjct: 67 QKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLAQ 126
Query: 131 HESRCTGVPENTVGSSRNVRAAESDQGAHRRPAPPPPNEFY 171
H C + +G + A E + H P N+++
Sbjct: 127 HRDVCRS-EQAQLGKGERISAPEREIYCHYCNQMIPENKYF 166
>sp|Q58D05|TRAD1_BOVIN TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus
GN=TRAFD1 PE=2 SV=1
Length = 580
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 5 SDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACS 64
+D+ T++C +C + IP N +H HC RN+ C VC + P+ E H H V C
Sbjct: 6 NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTC- 64
Query: 65 QCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIR 124
+C++ +E+ L H+ CP R+ C C+ L + L +H++ CG RTELC C R +
Sbjct: 65 KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVL 124
Query: 125 LRERYNHESRCT-GVPENTVGSSRNVRAAESDQGAHR 160
+++ H C V E V ++ A + G R
Sbjct: 125 VKDLKTHPEVCGRDVEEKRVEAAMPPNAYDESWGPDR 161
>sp|Q4R970|TRAD1_MACFA TRAF-type zinc finger domain-containing protein 1 OS=Macaca
fascicularis GN=TRAFD1 PE=2 SV=1
Length = 582
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
D+ T++C +C + IP N +H HC RN+ C +C + P+ E H H V C +
Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-K 65
Query: 66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRL 125
C++ +E+ +L H+ CP R+ C C+ L + L EH++ CG RTELC C R + +
Sbjct: 66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLV 125
Query: 126 RERYNHESRC 135
++ H C
Sbjct: 126 KDLKTHPEVC 135
>sp|O14545|TRAD1_HUMAN TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens
GN=TRAFD1 PE=1 SV=1
Length = 582
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 6 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ 65
D+ T++C +C + IP N +H HC RN+ C C + P+ E H H V C +
Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-K 65
Query: 66 CSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRL 125
C++ +E+ +L H+ CP R+ C C+ L + L EH++ CG RTELC C R + +
Sbjct: 66 CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLV 125
Query: 126 RERYNHESRC 135
++ H C
Sbjct: 126 KDLKTHPEVC 135
>sp|Q58DH1|XAF1_BOVIN XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2
Length = 297
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 10 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSET 69
++C +C R + S+++ LH AHC L C C + V + EEH H V C+ C ++
Sbjct: 6 QVCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQS 65
Query: 70 MEREILAIHKGENCPQRIVTCDFCEFP--LPAVDLAEHQEVCGNRTELCHLCNRYIRLRE 127
+ + L H+ + C +R V C FC+ L VDL EH CG +TELC C +++ LR
Sbjct: 66 VPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEHH--CGQQTELCPDCGQHVMLRV 123
Query: 128 RYNHESRC 135
H C
Sbjct: 124 LARHREEC 131
>sp|Q5NBU8|XAF1_MOUSE XIAP-associated factor 1 OS=Mus musculus GN=Xaf1 PE=2 SV=3
Length = 273
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 22/134 (16%)
Query: 10 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSET 69
++C +C R + S + LH AHC R + C C + +P +EH H SQ
Sbjct: 6 QVCRNCKRNVASLHFMLHEAHCLRFIVLCPECEEPIPESKMKEHMEVVHQQTKESQ---- 61
Query: 70 MEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERY 129
Q C FCE + +L H+ CG+RTE C CN+ I L+
Sbjct: 62 ---------------QHPAKCKFCELAVQLSNLDVHESHCGSRTEHCPHCNQPITLQVLS 106
Query: 130 NHESRC---TGVPE 140
H++ C G PE
Sbjct: 107 QHKAMCLSAKGRPE 120
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 23 NIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLN--THAPVACSQCSETMEREILAIHKG 80
N+D H C LE C C + + RK EEH + C +C T+ER + H
Sbjct: 153 NLDQHLQTCGFQLEDCPNCNNKIIRKSIEEHIDEECLKTKIKCLECGSTVERGDMDFHLD 212
Query: 81 ENCPQRIVTCDFCE 94
CP ++ C C+
Sbjct: 213 NVCPNIVIPCILCD 226
>sp|Q55A66|Y2098_DICDI TNF receptor-associated factor family protein DDB_G0272098
OS=Dictyostelium discoideum GN=DDB_G0272098 PE=3 SV=1
Length = 1084
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 10 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLN--THAPVACSQCS 67
K+ C + I S +D H C C+ C +++ R E H + P+ C C
Sbjct: 150 KLLKRCGK-INKSLLDEHDEQCLYQTITCEHCNELINRIDHEIHLSEWCSDIPIKCEDCK 208
Query: 68 ETMEREILAIHKGENCPQRIVTCDF----CEFPLPAVDLAEH 105
+++ + HK NCP+ ++ C + C+ L ++++H
Sbjct: 209 HVFKKKYIQEHKESNCPESVIDCVYVAGGCQKKLKRYNMSKH 250
>sp|Q28DL4|TRAF6_XENTR TNF receptor-associated factor 6 OS=Xenopus tropicalis GN=traf6
PE=2 SV=1
Length = 558
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 41 CGDMVPRKYAEEHFLN-THAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPA 99
C + + ++ E H + A V CSQC + + L HK E CP+R + C+ C +
Sbjct: 141 CTETMELRHLERHLVRCDFAGVECSQCQSSFPKYSLQKHKFEECPRRQIFCENCAVAMAL 200
Query: 100 VDLAEHQEVCGNRTELCHLCN-RYIRLRERYNHESRCTGVP 139
D H + C C C IR + ++ CT P
Sbjct: 201 EDKLNHDQTCPLAYVTCEYCQTNLIREQMPAHYSMDCTMAP 241
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 16/100 (16%)
Query: 44 MVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDF-------CEFP 96
+ P +A+ L+ C+ETME L H +V CDF C+
Sbjct: 119 LFPDNFAKREILSLRVKCPSQGCTETMELRHLERH--------LVRCDFAGVECSQCQSS 170
Query: 97 LPAVDLAEHQ-EVCGNRTELCHLCNRYIRLRERYNHESRC 135
P L +H+ E C R C C + L ++ NH+ C
Sbjct: 171 FPKYSLQKHKFEECPRRQIFCENCAVAMALEDKLNHDQTC 210
>sp|Q3MV19|TRF6A_XENLA TNF receptor-associated factor 6-A OS=Xenopus laevis GN=traf6-a
PE=1 SV=1
Length = 556
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 41 CGDMVPRKYAEEHFLNTH-APVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPA 99
C D + ++ E H + A V CSQC + + +L H C +R CD C +
Sbjct: 141 CTDTMELRHLEHHLVQCQFASVECSQCQGSFLKLLLDKHMEHECGRRRTFCDNCGLAMAY 200
Query: 100 VDLAEHQEVCGNRTELCHLCN-RYIRLRERYNHESRCTGVP 139
D + H+ +C C C IR + ++ CT P
Sbjct: 201 EDKSGHELICPMAYVTCDYCQTNLIREQMPAHYSMDCTMAP 241
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 12 CSHCDRAIPSSNIDLHFAH-CSRNLERCKVCG-DMVPRKYAEEHFLNTHAPVACSQCSET 69
CS C + +D H H C R C CG M + + A V C C
Sbjct: 164 CSQCQGSFLKLLLDKHMEHECGRRRTFCDNCGLAMAYEDKSGHELICPMAYVTCDYCQTN 223
Query: 70 MEREILAIHKGENCPQRIVTCDFCEF 95
+ RE + H +C + C +CEF
Sbjct: 224 LIREQMPAHYSMDCTMAPIPCMYCEF 249
>sp|B5DF45|TRAF6_RAT TNF receptor-associated factor 6 OS=Rattus norvegicus GN=Traf6 PE=2
SV=1
Length = 530
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 39 KVCGDMVPRKYAEEHFLN-THAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPL 97
K C + ++ E+H ++ A V C QC ++ + H E+CP+R V+C C P+
Sbjct: 137 KGCVQKMELRHLEDHQVHCEFALVICPQCQRFFQKCQINKHIIEDCPRRQVSCVNCAVPM 196
Query: 98 PAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNH 131
P + H + C +C C + + NH
Sbjct: 197 PYEEKEIHDQSCPLANIICEYCGTILIREQMPNH 230
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 11 ICSHCDRAIPSSNIDLHFAH-CSRNLERCKVCGDMVPRKYAEEHFLNTHAPVA---CSQC 66
IC C R I+ H C R C C VP Y E+ + P+A C C
Sbjct: 161 ICPQCQRFFQKCQINKHIIEDCPRRQVSCVNCA--VPMPYEEKEIHDQSCPLANIICEYC 218
Query: 67 SETMEREILAIHKGENCPQRIVTCDFCEF 95
+ RE + H +CP V C F F
Sbjct: 219 GTILIREQMPNHYDLDCPTAPVPCTFSVF 247
>sp|B6CJY4|TRAF6_CERAT TNF receptor-associated factor 6 OS=Cercocebus atys GN=TRAF6 PE=2
SV=1
Length = 522
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 59 APVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHL 118
A V C QC ++ + IH ++CP+R V+CD C + D H + C +C
Sbjct: 158 ALVDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEY 217
Query: 119 CNRYIRLRERYNH 131
CN + + NH
Sbjct: 218 CNTILIREQMPNH 230
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 12 CSHCDRAIPSSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLN-THAPVACSQCSET 69
C C R +I++H C R C C +V + E H N A V C C+
Sbjct: 162 CPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTI 221
Query: 70 MEREILAIHKGENCPQRIVTCDFCEF 95
+ RE + H +CP + C F F
Sbjct: 222 LIREQMPNHYDLDCPTAPIPCTFSTF 247
>sp|B6CJY5|TRAF6_MACMU TNF receptor-associated factor 6 OS=Macaca mulatta GN=TRAF6 PE=2
SV=1
Length = 522
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 59 APVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHL 118
A V C QC ++ + IH ++CP+R V+CD C + D H + C +C
Sbjct: 158 ALVDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEY 217
Query: 119 CNRYIRLRERYNH 131
CN + + NH
Sbjct: 218 CNTILIREQMPNH 230
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 12 CSHCDRAIPSSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLN-THAPVACSQCSET 69
C C R +I++H C R C C +V + E H N A V C C+
Sbjct: 162 CPQCQRPFQKFHINIHILKDCPRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTI 221
Query: 70 MEREILAIHKGENCPQRIVTCDFCEF 95
+ RE + H +CP + C F F
Sbjct: 222 LIREQMPNHYDLDCPTAPIPCTFSTF 247
>sp|Q9Y4K3|TRAF6_HUMAN TNF receptor-associated factor 6 OS=Homo sapiens GN=TRAF6 PE=1 SV=1
Length = 522
Score = 37.7 bits (86), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 59 APVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHL 118
A + C QC ++ + IH ++CP+R V+CD C + D H + C +C
Sbjct: 158 ALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEY 217
Query: 119 CNRYIRLRERYNH 131
CN + + NH
Sbjct: 218 CNTILIREQMPNH 230
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 23 NIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNT--HAPVACSQCSETMEREILAIHKG 80
+++ H AHC L C C + + H L V+C C+ +M E IH
Sbjct: 147 HLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHD- 205
Query: 81 ENCPQRIVTCDFCEFPLPAVDLAEHQEV 108
+NCP V C++C L + H ++
Sbjct: 206 QNCPLANVICEYCNTILIREQMPNHYDL 233
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 12 CSHCDRAIPSSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLN-THAPVACSQCSET 69
C C R +I++H C R C C + + E H N A V C C+
Sbjct: 162 CPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTI 221
Query: 70 MEREILAIHKGENCPQRIVTCDFCEF 95
+ RE + H +CP + C F F
Sbjct: 222 LIREQMPNHYDLDCPTAPIPCTFSTF 247
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 66 CSETMEREILAIHKGENCPQRIVTCDF--CEFPLPAVDLAEHQEVCGNRTELCHLCNR-Y 122
C E +E + + H NC + VTC F CE L L HQ CG + +C C R
Sbjct: 130 CKEKIEVDQIDSHLI-NCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVICDFCKRDD 188
Query: 123 IRLRERYNHESRCTGVP 139
I+ +E H C VP
Sbjct: 189 IKKKELETHYKTCPMVP 205
>sp|Q6DJN2|TRF6B_XENLA TNF receptor-associated factor 6-B OS=Xenopus laevis GN=traf6-b
PE=2 SV=1
Length = 556
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 41 CGDMVPRKYAEEHFLN-THAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPA 99
C + + ++ E H A V CSQC + + L H C +R + CD C +
Sbjct: 141 CTETMELRHLERHLGQCQFASVECSQCQGSFPKSRLEKHMEHECGRRKIFCDNCGLAMAY 200
Query: 100 VDLAEHQEVCGNRTELCHLCN-RYIRLRERYNHESRCTGVP 139
D++ H+ +C C C IR + ++ CT P
Sbjct: 201 EDMSGHELICPLAYVTCEYCQTNLIREQMPSHYSMDCTMAP 241
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 44 MVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLA 103
+ P +A+ L+ C+ETME L H G+ C V C C+ P L
Sbjct: 119 LFPDNFAKREILSLKVKCPSQGCTETMELRHLERHLGQ-CQFASVECSQCQGSFPKSRLE 177
Query: 104 EHQE-VCGNRTELCHLCNRYIRLRERYNHESRC 135
+H E CG R C C + + HE C
Sbjct: 178 KHMEHECGRRKIFCDNCGLAMAYEDMSGHELIC 210
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 12 CSHCDRAIPSSNIDLHFAH-CSRNLERCKVCG-DMVPRKYAEEHFLNTHAPVACSQCSET 69
CS C + P S ++ H H C R C CG M + + A V C C
Sbjct: 164 CSQCQGSFPKSRLEKHMEHECGRRKIFCDNCGLAMAYEDMSGHELICPLAYVTCEYCQTN 223
Query: 70 MEREILAIHKGENCPQRIVTCDFCEF----PLPAVDLAEH 105
+ RE + H +C + C + EF + DLA H
Sbjct: 224 LIREQMPSHYSMDCTMAPIPCMYYEFGCTEKMQRNDLARH 263
>sp|P16373|ZFP59_MOUSE Zinc finger protein 59 OS=Mus musculus GN=Zfp59 PE=2 SV=2
Length = 634
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 7/126 (5%)
Query: 12 CSHCDRAIPSSNI-DLHF-AHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PVACSQC 66
C+ C +A +I H H N +CK+CG P KY L H P C +C
Sbjct: 356 CNVCGKAFRLQDILSEHLKTHTEENPFKCKLCGSSFPHKYQLNKHLTVHTDGKPYQCKEC 415
Query: 67 SETM-EREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEV-CGNRTELCHLCNRYIR 124
+ +R L H+ + ++ C+ C L L HQ+ G R C C +
Sbjct: 416 GKCFRQRSKLTEHESIHTGKKPFQCEACGKSLANTLLIHHQKSHSGERPFECKECGKAFL 475
Query: 125 LRERYN 130
L + N
Sbjct: 476 LPSQLN 481
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 8/131 (6%)
Query: 12 CSHCDRA--IPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSE- 68
C C +A +PS H S+ CKVCG R+ HA V +CSE
Sbjct: 467 CKECGKAFLLPSQLNSHKIVHTSKRPFECKVCGKSFKRESNLIQHGAVHAGVKSYECSEC 526
Query: 69 ---TMEREILAIHKGENCPQRIVTCDFCEFPLPAVD-LAEHQEV-CGNRTELCHLCNRYI 123
++R L H+ + ++ C C + L EHQ + G + C LC
Sbjct: 527 GKGFIDRSSLFHHRKIHSDEKPFKCQECGKAFVVLAYLIEHQSIHTGEKPFECELCGSAF 586
Query: 124 RLRERYNHESR 134
R R + N R
Sbjct: 587 RCRSQLNKHLR 597
>sp|Q3ZCC3|TRAF6_BOVIN TNF receptor-associated factor 6 OS=Bos taurus GN=TRAF6 PE=2 SV=1
Length = 542
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 59 APVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHL 118
A ++C QC ++ L IH + CP+R V C+ C + D H++ C +C
Sbjct: 159 ALMSCPQCQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEY 218
Query: 119 CNRYIRLRERYNH 131
CN + + NH
Sbjct: 219 CNTMLIREQMPNH 231
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 23 NIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNT--HAPVACSQCSETMEREILAIHKG 80
+++ H AHC L C C + + H L V C C+ +M E IH+
Sbjct: 148 HLEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHE- 206
Query: 81 ENCPQRIVTCDFCEFPLPAVDLAEHQEV 108
+NCP V C++C L + H ++
Sbjct: 207 QNCPLANVICEYCNTMLIREQMPNHYDL 234
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 12 CSHCDRAIPSSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLN-THAPVACSQCSET 69
C C R ++++H C R C+ C + + E H N A V C C+
Sbjct: 163 CPQCQRPFQKCHLNIHILKECPRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEYCNTM 222
Query: 70 MEREILAIHKGENCPQRIVTCDFCEF 95
+ RE + H +CP V C F F
Sbjct: 223 LIREQMPNHYDLDCPTAPVPCTFSAF 248
>sp|Q6IWL4|TRAF6_DANRE TNF receptor-associated factor 6 OS=Danio rerio GN=traf6 PE=2 SV=2
Length = 542
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 57/159 (35%), Gaps = 19/159 (11%)
Query: 9 TKICSHCDRAIPSSNIDLHFA-HCSRNLERCKVCGDMVPRKYAEEH-----FLNTHAPVA 62
T C C ++P S++D H + HC + + C C + H F NT
Sbjct: 160 TAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVYAVKQNHEQFCPFANT----V 215
Query: 63 CSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRY 122
C C + R+ LA+H +C + V C F F R EL +
Sbjct: 216 CEYCEMELIRDQLALHCDTDCLKAPVACTFSTFGCREK---------MTRNELAQHMQEF 266
Query: 123 IRLRERYNHESRCTGVPENTVGSSRNVRAAESDQGAHRR 161
++ RY E + N S + D+GA R
Sbjct: 267 TQMHMRYMAEFLRSQTLNNCTMPSAAAHLSSDDRGASAR 305
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 41 CGDMVPRKYAEEHFLN-THAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPA 99
C + + + E+H A C QC E++ L HK ++C QRI+TC C
Sbjct: 140 CSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHCLQRIMTCPDCAGSFVY 199
Query: 100 VDLAEHQEVCGNRTELCHLC 119
H++ C +C C
Sbjct: 200 AVKQNHEQFCPFANTVCEYC 219
>sp|Q9BUZ4|TRAF4_HUMAN TNF receptor-associated factor 4 OS=Homo sapiens GN=TRAF4 PE=1 SV=1
Length = 470
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 15 CDRAIPSSNIDLHFAH-CSRNLERCKVCG-DMVPRKYAEEHFLNTHAPVAC-SQCSETME 71
C + ++ H H C + +C+ CG D Y + V C ++C M
Sbjct: 117 CPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESVYCENKCGARMM 176
Query: 72 REILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVC 109
R +LA H CP+R C +C + HQ C
Sbjct: 177 RRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQC 214
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 66 CSETMEREILAIHKGENCPQRIVTCDF--CEFPLPAVDLAEHQEVCGNRTELCHLCNR-Y 122
C E +E + + H NC + VTC F CE L L HQ CG + C C R
Sbjct: 130 CKEKIEVDQIDSHLI-NCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVTCDFCKRDD 188
Query: 123 IRLRERYNHESRCTGVP 139
I+ +E H C VP
Sbjct: 189 IKKKELETHYKTCPMVP 205
>sp|P17031|ZNF26_HUMAN Zinc finger protein 26 OS=Homo sapiens GN=ZNF26 PE=2 SV=3
Length = 533
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 1 MAMTSDETTKICSHCDRA--IPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTH 58
+ M + E CS C +A + + I H N +C CG RK L H
Sbjct: 333 IRMHTGEKPYQCSDCGKAFNMKTQLIVHQGVHTGNNPYQCGECGKAFGRKEQLTAHLRAH 392
Query: 59 A---PVACSQCSETM-EREILAIHKGENCPQRIVTCDFCE 94
A P CS+C + + L IH+ + +R C CE
Sbjct: 393 AGEKPYGCSECGKAFSSKSYLVIHRRTHTGERPYECSLCE 432
>sp|Q61382|TRAF4_MOUSE TNF receptor-associated factor 4 OS=Mus musculus GN=Traf4 PE=1 SV=2
Length = 470
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 15 CDRAIPSSNIDLHFAH-CSRNLERCKVCG-DMVPRKYAEEHFLNTHAPVAC-SQCSETME 71
C + ++ H H C + +C+ CG D Y + V C ++C M
Sbjct: 117 CPAKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGVCPQESVYCENKCGARMM 176
Query: 72 REILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVC 109
R +LA H CP+R C +C + HQ C
Sbjct: 177 RRLLAQHATSECPKRTQPCAYCTKEFVYDTIQSHQYQC 214
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 31 CSRNLERCKVCGDMVPRKYAEEHFLNT--HAPVAC-SQCSETMEREILAIHKGENCPQRI 87
C + E C+ G P ++ + H LNT V C ++C + R L H +CP+R
Sbjct: 83 CIHSEEGCRWSG---PLRHLQGH-LNTCSFNVVPCPNRCPAKLSRRDLPAHLQHDCPKRR 138
Query: 88 VTCDFCEFPLPAVDLAEHQEVCGNRTELC 116
+ C+FC H+ VC + C
Sbjct: 139 LKCEFCGCDFSGEAYESHEGVCPQESVYC 167
>sp|Q9W747|DRL_DANRE Zinc finger protein draculin OS=Danio rerio GN=drl PE=2 SV=2
Length = 411
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Query: 4 TSDETTKICSHCDRAIP-SSNIDLHF-AHCSRNLERCKVCGDMVPRKYAEEHFLNTHA-- 59
T + + CSHC + +++ +H H RC CG P K + + L+ HA
Sbjct: 30 TKAKKSVACSHCKKRFSHKAHLQIHMRVHTGEKPYRCDQCGKCFPYKQSLKLHLDIHAKG 89
Query: 60 -PVACSQCSETMEREI-LAIHKGENCPQRIVTCDFCEFPLPAVD-LAEHQEV-CGNRTEL 115
P C +C E+ + + L H + + CD CE D L H ++ G +
Sbjct: 90 NPYTCDECGESFKTRLQLRSHMTLHPKYKPYKCDQCEKSYGREDHLQRHMKLHTGEKPHK 149
Query: 116 CHLCNRYIRLRE 127
C C + +R+
Sbjct: 150 CEHCGKSFPMRD 161
>sp|Q9UK13|ZN221_HUMAN Zinc finger protein 221 OS=Homo sapiens GN=ZNF221 PE=2 SV=3
Length = 617
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 16/141 (11%)
Query: 5 SDETTKICSHCDRAI-PSSNIDLHF-AHCSRNLERCKVCGDMVPRKYAEEHFLNTH---- 58
S E + C C ++ S + +H H +C VCG +++ + L TH
Sbjct: 193 SGEKSHTCGECGKSFCYSPALHIHQRVHMGEKCYKCDVCG----KEFNQSSHLQTHQRVH 248
Query: 59 ---APVACSQCSETM-EREILAIHKGENCPQRIVTCDFC-EFPLPAVDLAEHQEV-CGNR 112
P C QC + R L +H + ++ C+ C + + L EHQ + G +
Sbjct: 249 TGEKPFKCGQCGKGFHSRSALNVHCKLHTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 308
Query: 113 TELCHLCNRYIRLRERYNHES 133
C +C + R+R R N S
Sbjct: 309 PFKCDICGKSFRVRSRLNRHS 329
>sp|P39429|TRAF2_MOUSE TNF receptor-associated factor 2 OS=Mus musculus GN=Traf2 PE=1 SV=1
Length = 501
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 54 FLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRT 113
FL T P AC E+E H + CP+R ++C C P VDL H EVC
Sbjct: 131 FLLTECP-ACKGLVRLSEKEH---HTEQECPKRSLSCQHCRAPCSHVDLEVHYEVCPKFP 186
Query: 114 ELCHLCNRYIRLRERYNHESR 134
C C + RE + R
Sbjct: 187 LTCDGCGKKKIPRETFQDHVR 207
>sp|Q68CR1|SE1L3_HUMAN Protein sel-1 homolog 3 OS=Homo sapiens GN=SEL1L3 PE=1 SV=2
Length = 1132
Score = 35.4 bits (80), Expect = 0.25, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 110 GNRTELCHLCNRYIRLRERYNHESRCTGVP 139
G R E CHL N Y+ L+ RY S C P
Sbjct: 469 GERQEACHLHNSYLDLQRRYGRPSMCRAFP 498
>sp|Q8SW43|Z379_ENCCU Zinc finger C2H2 protein ECU03_0790 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU03_0790 PE=4 SV=1
Length = 190
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 41 CGDMVPRKYAEEHFLNTHA---PVACSQCSET-MEREILAIHKGENCPQRIVTCDFCEFP 96
CG PR+ LNTH P C C ++ M+ L++HK ++ P + C+ C +
Sbjct: 10 CGKSFPRRAKLSDHLNTHTRSRPYKCDMCEKSYMKNGHLSVHKKKHFPPELA-CERCGYM 68
Query: 97 LPAVD-LAEHQEVCGNRTELCHLCNRYIRLRERYN 130
D L +HQ+ C C +C + R R ++
Sbjct: 69 CHTRDRLHKHQKACLEYK--CGICGKRYRKRSWFD 101
>sp|A7XUJ6|TRAF6_PIG TNF receptor-associated factor 6 OS=Sus scrofa GN=TRAF6 PE=2 SV=1
Length = 541
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 59 APVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHL 118
A + C QC ++ L IH + CP+R V+C C + D H + C +C
Sbjct: 159 ALMNCPQCQRPFQKCQLNIHILKECPRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEY 218
Query: 119 CNRYIRLRERYNH 131
CN + + NH
Sbjct: 219 CNTVLIREQMPNH 231
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 23 NIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNT--HAPVACSQCSETMEREILAIHKG 80
+++ H AHC L C C + H L V+C C+ +M E IH
Sbjct: 148 HLEDHQAHCEFALMNCPQCQRPFQKCQLNIHILKECPRRQVSCVNCAVSMAFEDKEIHD- 206
Query: 81 ENCPQRIVTCDFCEFPLPAVDLAEHQEV-CGNRTELCHLCNRYIRLRERYNHESRCTGVP 139
+NCP V C++C L + H ++ C C + + NH +R +
Sbjct: 207 QNCPLANVICEYCNTVLIREQMPNHYDLDCPTAPVPCTFSTFGCHEKMQRNHLAR--HLQ 264
Query: 140 ENTVGSSRNVRAAESDQGAHRRPAPPP 166
ENT R + A++ QG AP P
Sbjct: 265 ENTQSHMRMM--AQALQGLSLAVAPVP 289
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 12 CSHCDRAIPSSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLN-THAPVACSQCSET 69
C C R +++H C R C C + + E H N A V C C+
Sbjct: 163 CPQCQRPFQKCQLNIHILKECPRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEYCNTV 222
Query: 70 MEREILAIHKGENCPQRIVTCDFCEF 95
+ RE + H +CP V C F F
Sbjct: 223 LIREQMPNHYDLDCPTAPVPCTFSTF 248
>sp|Q54YP8|Y7813_DICDI TNF receptor-associated factor family protein DDB_G0278133
OS=Dictyostelium discoideum GN=DDB_G0278133 PE=3 SV=1
Length = 477
Score = 34.7 bits (78), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 12 CSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLN--THAPVACSQCSET 69
C+ C S + D H CS+ +C+ C + R +H T + C C
Sbjct: 172 CNLCLIKFCSKDSDKHQNECSKVYSKCEFCNSNILRSSLSDHHKTHCTKYLIECPHCKIM 231
Query: 70 MEREILAIHKGENCPQRIVTC 90
++R+ + H ++C + ++TC
Sbjct: 232 IKRDTITKHINDDCEEIMITC 252
>sp|Q54FB9|Y0971_DICDI TNF receptor-associated factor family protein DDB_G0290971
OS=Dictyostelium discoideum GN=DDB_G0290971 PE=3 SV=1
Length = 445
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 15 CDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQ---CSETME 71
CD+ + I H C + + C C +P + + + C+Q C ++
Sbjct: 150 CDKILRLKQIAEHKIDCKFSSKYCLHCDKEIPGQLDAHALVCPKVRIQCTQSESCKKSFP 209
Query: 72 REILAIHKGENCPQRIVTCDFC--------EFPLPAVDLAEHQEVCGNRTELCHLCN 120
RE L +H ++C IV C +C +LA+H E + E+ + N
Sbjct: 210 REQLRLHIDQDCKFTIVKCKYCCLNNSKNESIDFKRFELADHYEKVNHSFEMDKVIN 266
>sp|Q28151|OZF_BOVIN Zinc finger protein OZF OS=Bos taurus GN=ZNF146 PE=3 SV=1
Length = 292
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 38 CKVCGDMVPRKYA---EEHFLNTHAPVACSQCSETMEREILAI-HKGENCPQRIVTCDFC 93
CKVCG + K EHF N P C++C + ++ I H+ + ++++ C+ C
Sbjct: 18 CKVCGKIFSHKSTLTEHEHFHNREKPFECNECGKAFSQKQYVIKHQNTHTGEKLLECNEC 77
Query: 94 EFPLPAVD-LAEHQEV 108
+ L HQ++
Sbjct: 78 GKSFSQKENLLTHQKI 93
>sp|Q96IR2|ZN845_HUMAN Zinc finger protein 845 OS=Homo sapiens GN=ZNF845 PE=2 SV=3
Length = 970
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 12 CSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PVACSQC 66
C CD A SN++ H H L +C CG RK + H P C++C
Sbjct: 497 CEECDEAFSFKSNLERHRIIHTGEKLYKCNECGKTFSRKSSLTRHCRLHTGEKPYQCNEC 556
Query: 67 SETME-REILAIHKGENCPQRIVTCDFCEFPLP-AVDLAEHQEVCG-NRTELCHLCNRYI 123
+ + L H+ + ++ C+ C A +A H + R+ C+ C ++
Sbjct: 557 GKAFRGQSALIYHQAIHGIGKLYKCNDCHQVFSNATTIANHWRIHNEERSYKCNRCGKFF 616
Query: 124 RLR 126
R R
Sbjct: 617 RHR 619
>sp|Q54FC5|Y0965_DICDI TNF receptor-associated factor family protein DDB_G0290965
OS=Dictyostelium discoideum GN=DDB_G0290965 PE=3 SV=1
Length = 575
Score = 33.5 bits (75), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 12 CSH--CDRAIPSSNIDLHFAHCSRNLERCKVCG-DMVPRKYAEEHFLNTH---APVACSQ 65
CSH CD + +++ H C L +CK C D +K E H N P+ C Q
Sbjct: 145 CSHNGCDVVLRLNSLKEHENQCGYKLVKCKYCACDDTIQKELENH--NNECPKFPIGCPQ 202
Query: 66 -CSETMEREILAIHKGENCPQRIVTCDFCEF 95
CS +ER+ H +C + C + E+
Sbjct: 203 SCSIMVERDQTQSHINNDCNNSTIQCKYYEY 233
>sp|Q8CHC8|ADNP2_MOUSE ADNP homeobox protein 2 OS=Mus musculus GN=Adnp2 PE=2 SV=2
Length = 1165
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 2 AMTSDETTKICSHCDRAIPSSNIDLHF--AHCSRNLERCKVCGDMVPRKYAEEHFLNTHA 59
A+ + K C C+ PS+ +H AH + C+VC ++ P + H H
Sbjct: 688 ALKQAKQWKTCPVCNELFPSNVYQVHMEVAHKQSEAQLCQVCNELFPANVYQVHMEVAHK 747
Query: 60 PVACSQCSETMEREILA 76
+ S+ SE +E E LA
Sbjct: 748 Q-SESKSSEKLEPEKLA 763
>sp|A6NM28|ZFP92_HUMAN Zinc finger protein 92 homolog OS=Homo sapiens GN=ZFP92 PE=2 SV=3
Length = 416
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 16/127 (12%)
Query: 7 ETTKICSHCDRAIP-SSNIDLH-FAHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PV 61
E +C C +A SSN+ H H C CG + R +A H+ P
Sbjct: 149 EKRYLCQQCGKAFSRSSNLIKHRIIHSGEKPYACPECGKLFRRSFALLEHQRIHSGEKPY 208
Query: 62 ACSQCSETMEREI-----LAIHKGENCPQRIVTCDFC-EFPLPAVDLAEHQEV-CGNRTE 114
AC +CS+T R IH GE R C C + + L EH V G R
Sbjct: 209 ACPECSKTFTRSSNLIKHQVIHSGE----RPFACGDCGKLFRRSFALLEHARVHSGERPY 264
Query: 115 LCHLCNR 121
C C +
Sbjct: 265 ACPECGK 271
>sp|Q5RC05|ZN438_PONAB Zinc finger protein 438 OS=Pongo abelii GN=ZNF438 PE=2 SV=1
Length = 827
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 20 PSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PVACSQCSETMEREI-- 74
PSS F+ + RC VC K + +NTH P +C C ++ R
Sbjct: 490 PSSVFRNGFSGIKKPWHRCHVCNHHFQFKQHLQDHMNTHTNRRPYSCRICRKSYVRPGSL 549
Query: 75 ---LAIHKGENCPQRIVTCDFC 93
+ +H GEN ++++ C+FC
Sbjct: 550 STHMKLHHGENRLKKLMCCEFC 571
>sp|Q557K0|Y3509_DICDI TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum
GN=DDB_G0273433 PE=3 SV=1
Length = 450
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 27 HFAHCSRNLERCKVCGDMVPRKYAEEHFLNT---HAPVACSQCSETMEREILAIHKGENC 83
F C N +CK + RK EH + ++ + C +CSE +ER+ L H C
Sbjct: 137 QFIKCPNNSNKCK----YIIRKNQIEHHNQSVCDYSLIQCEKCSELIERKKLNKHIESEC 192
Query: 84 PQRIVTCDFCEFPLPAVDLAEHQE 107
++TC C + + H E
Sbjct: 193 DTLMITCSKCSASIGKKLMNHHLE 216
>sp|Q9HAH1|ZN556_HUMAN Zinc finger protein 556 OS=Homo sapiens GN=ZNF556 PE=2 SV=1
Length = 456
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 12 CSHCDRAI--PSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PVACSQC 66
CS C + SS I AH + L +CK CG R + TH+ P AC C
Sbjct: 149 CSQCGKLFTHSSSLIRHKRAHSGQKLYKCKECGKAFSRPSYLQTHEKTHSGEKPYACQSC 208
Query: 67 SETMER-----EILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNR 121
+T R E + H GE P C F P A G R C C +
Sbjct: 209 GKTFLRSHSLTEHVRTHTGEK-PYECGQCGK-GFSCPKSFRAHVMMHAGGRPYECKHCGK 266
Query: 122 YIRLRERY 129
R ++ +
Sbjct: 267 AFRCQKSF 274
>sp|Q9GZX5|ZN350_HUMAN Zinc finger protein 350 OS=Homo sapiens GN=ZNF350 PE=1 SV=3
Length = 532
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 7 ETTKICSHCDRAI--PSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PV 61
E +CS C +A S D H RC +C RK+ TH P
Sbjct: 203 EKHHVCSECGKAFIKKSWLTDHQVMHTGEKPHRCSLCEKAFSRKFMLTEHQRTHTGEKPY 262
Query: 62 ACSQCSET-MEREILAIHKGENCPQRIVTCDFC-EFPLPAVDLAEHQEV-CGNRTELCHL 118
C +C + +++ L IH+ + ++ C C + + +L HQ + G + +C+
Sbjct: 263 ECPECGKAFLKKSRLNIHQKTHTGEKPYICSECGKGFIQKGNLIVHQRIHTGEKPYICNE 322
Query: 119 CNR 121
C +
Sbjct: 323 CGK 325
>sp|Q68DY9|ZN772_HUMAN Zinc finger protein 772 OS=Homo sapiens GN=ZNF772 PE=2 SV=2
Length = 489
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Query: 29 AHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PVACSQCSETMERE-ILAIHKGENCP 84
+HC + +C CG RK + H P C +C +T R+ ILA H+ +
Sbjct: 259 SHCGKRHYKCSECGKTFSRKDSLVQHQRVHTGERPYECGECGKTFSRKPILAQHQRIHTG 318
Query: 85 QRIVTCDFCEFPLP-AVDLAEHQEV-CGNRTELCHLCNR-YIRLRERYNHESRCTG 137
+ C C + +L HQ V G R C C + Y HES TG
Sbjct: 319 EMPYECGICGKVFNHSSNLIVHQRVHTGARPYKCSECGKAYSHKSTLVQHESIHTG 374
>sp|Q2TAD9|CYR1B_XENLA Cysteine and histidine-rich protein 1-B OS=Xenopus laevis
GN=cyhr1-b PE=2 SV=2
Length = 365
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 37 RCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDF---- 92
RC++ + R A E + + P C C + R +L HK E C R+ C +
Sbjct: 117 RCEISKSLCCRNLAVEKAI-SELPSDCGFCLKQFPRSLLERHKKEECQDRVTQCKYKRIG 175
Query: 93 CEFPLPAVDLAEHQEVC 109
C + P +L H+ C
Sbjct: 176 CPWQGPYHELTVHESEC 192
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 15/159 (9%)
Query: 15 CDRAIPSSNIDLHFAHCSR------NLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSE 68
C I ++ HF +C N + CK+ + E + + V C C
Sbjct: 111 CKDIIRIEEMETHFKNCQYAFINCPNGDECKINSRFRKNQLEEHNKSCEYLKVPCQYCKT 170
Query: 69 TMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHL----CNRYIR 124
+ + I H C + C C+ + ++L+EH EVC T C C +
Sbjct: 171 PIAK-INKDHLESECQSYKIKCTHCKLEMLRMELSEHLEVCPEMTIQCKYKEGGCQVSFQ 229
Query: 125 LRERYNH---ESRCTGVPENTVGSSRNVRAAESDQGAHR 160
+ + NH E+ G +N + R + ESD+ R
Sbjct: 230 RKHQANHLASENNHIGFIQNIIDQHR-ILLDESDRCFKR 267
>sp|O95625|ZBT11_HUMAN Zinc finger and BTB domain-containing protein 11 OS=Homo sapiens
GN=ZBTB11 PE=1 SV=2
Length = 1053
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 38 CKVCGDMVPRKYAEEHFLNTHA---PVACSQCSET-MEREILAIHKGENCPQRIVTCDFC 93
C +CG +P+ Y+ + H P AC C +T + + L +H+ + Q+ C+ C
Sbjct: 653 CSICGRTLPKLYSLRIHMLKHTGVKPHACQVCGKTFIYKHGLKLHQSLHQSQKQFQCELC 712
Query: 94 -EFPLPAVDLAEHQEV-CGNRTELCHLCNR 121
+ + L EH + G LC +C +
Sbjct: 713 VKSFVTKRSLQEHMSIHTGESKYLCSVCGK 742
>sp|Q7Z4V0|ZN438_HUMAN Zinc finger protein 438 OS=Homo sapiens GN=ZNF438 PE=2 SV=1
Length = 828
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 20 PSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHA---PVACSQCSETMEREI-- 74
PSS F+ + RC VC K +NTH P +C C ++ R
Sbjct: 491 PSSVFRNGFSGIKKPWHRCHVCNHHFQFKQHLRDHMNTHTNRRPYSCRICRKSYVRPGSL 550
Query: 75 ---LAIHKGENCPQRIVTCDFC 93
+ +H GEN ++++ C+FC
Sbjct: 551 STHMKLHHGENRLKKLMCCEFC 572
>sp|Q12933|TRAF2_HUMAN TNF receptor-associated factor 2 OS=Homo sapiens GN=TRAF2 PE=1 SV=2
Length = 501
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 78 HKGENCPQRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNHESRCTG 137
H CP+R ++C C P D+ H EVC C C + RE++ + G
Sbjct: 151 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG 210
>sp|P70196|TRAF6_MOUSE TNF receptor-associated factor 6 OS=Mus musculus GN=Traf6 PE=1 SV=2
Length = 530
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 39 KVCGDMVPRKYAEEHFLN-THAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPL 97
K C + ++ E+H ++ A V C QC ++ + H E+CP+R V+C C +
Sbjct: 137 KGCLQKMELRHLEDHQVHCEFALVNCPQCQRPFQKCQVNTHIIEDCPRRQVSCVNCAVSM 196
Query: 98 PAVDLAEHQEVCGNRTELCHLCNRYIRLRERYNH 131
+ H + C +C C + + NH
Sbjct: 197 AYEEKEIHDQSCPLANIICEYCGTILIREQMPNH 230
>sp|Q96CS4|ZN689_HUMAN Zinc finger protein 689 OS=Homo sapiens GN=ZNF689 PE=1 SV=1
Length = 500
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 60 PVACSQCSETMERE-ILAIHKGENCPQRIVTCDFC--EFPLPAVDLAEHQEV-CGNRTEL 115
P C C R LAIH+ + +++ CD C F P++ LA H+ V G R
Sbjct: 372 PYPCPDCGRAFRRSGSLAIHRSTHTEEKLHACDDCGRRFAYPSL-LASHRRVHSGERPYA 430
Query: 116 CHLCNR 121
C LC++
Sbjct: 431 CDLCSK 436
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,500,693
Number of Sequences: 539616
Number of extensions: 3218223
Number of successful extensions: 8008
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 7750
Number of HSP's gapped (non-prelim): 406
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)