Query 028834
Match_columns 203
No_of_seqs 126 out of 1849
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 03:16:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028834.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028834hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3571 Predicted hydrolase of 99.9 8.9E-22 1.9E-26 138.5 13.1 165 20-187 11-180 (213)
2 PLN02824 hydrolase, alpha/beta 99.8 1.6E-19 3.6E-24 143.6 15.1 105 22-131 28-136 (294)
3 TIGR02240 PHA_depoly_arom poly 99.8 1E-18 2.2E-23 137.9 14.7 103 21-131 23-125 (276)
4 TIGR03611 RutD pyrimidine util 99.8 1.7E-18 3.6E-23 133.9 13.5 103 21-130 11-113 (257)
5 TIGR03343 biphenyl_bphD 2-hydr 99.8 5.7E-18 1.2E-22 133.6 15.7 106 22-131 29-135 (282)
6 PRK00870 haloalkane dehalogena 99.8 7.9E-18 1.7E-22 134.5 16.6 103 22-130 45-148 (302)
7 TIGR03056 bchO_mg_che_rel puta 99.8 8.9E-18 1.9E-22 131.8 15.7 103 22-131 27-129 (278)
8 PHA02857 monoglyceride lipase; 99.8 2E-17 4.4E-22 130.4 16.8 111 18-132 20-132 (276)
9 KOG1455 Lysophospholipase [Lip 99.8 2E-17 4.3E-22 128.1 16.0 151 20-173 51-271 (313)
10 PRK03592 haloalkane dehalogena 99.8 2E-17 4.4E-22 131.7 16.5 101 22-130 26-126 (295)
11 PLN02385 hydrolase; alpha/beta 99.8 1.4E-17 3E-22 135.8 14.6 108 21-131 85-196 (349)
12 TIGR02427 protocat_pcaD 3-oxoa 99.8 1.1E-17 2.4E-22 128.3 13.2 102 22-131 12-113 (251)
13 PLN02298 hydrolase, alpha/beta 99.8 6E-17 1.3E-21 131.1 18.1 108 21-131 57-168 (330)
14 PRK10349 carboxylesterase BioH 99.8 3.1E-17 6.6E-22 128.0 15.5 169 20-201 10-253 (256)
15 PLN02578 hydrolase 99.8 3.1E-17 6.7E-22 134.0 15.7 102 22-131 85-186 (354)
16 PRK10673 acyl-CoA esterase; Pr 99.8 2.2E-17 4.8E-22 128.3 14.2 102 20-130 13-114 (255)
17 TIGR01738 bioH putative pimelo 99.8 4.8E-17 1E-21 124.4 14.6 96 22-130 3-98 (245)
18 PRK10749 lysophospholipase L2; 99.7 1E-16 2.2E-21 129.9 16.8 106 21-131 52-165 (330)
19 PLN02894 hydrolase, alpha/beta 99.7 1.7E-16 3.6E-21 131.7 17.1 107 20-131 102-210 (402)
20 TIGR01250 pro_imino_pep_2 prol 99.7 2.3E-16 4.9E-21 123.6 17.1 106 22-130 24-129 (288)
21 PLN03087 BODYGUARD 1 domain co 99.7 1.3E-16 2.8E-21 134.0 16.4 107 23-132 201-309 (481)
22 KOG4409 Predicted hydrolase/ac 99.7 2E-17 4.4E-22 130.3 9.8 109 19-132 86-195 (365)
23 TIGR03695 menH_SHCHC 2-succiny 99.7 3.1E-16 6.7E-21 120.0 15.1 103 23-131 1-104 (251)
24 PLN02965 Probable pheophorbida 99.7 9.3E-17 2E-21 125.4 11.1 101 24-131 4-106 (255)
25 PRK06489 hypothetical protein; 99.7 3.9E-16 8.5E-21 127.8 15.1 107 23-130 69-187 (360)
26 PRK14875 acetoin dehydrogenase 99.7 6.3E-16 1.4E-20 126.7 14.9 103 21-131 129-231 (371)
27 TIGR01392 homoserO_Ac_trn homo 99.7 8.6E-16 1.9E-20 125.4 15.0 110 22-131 30-161 (351)
28 PLN02211 methyl indole-3-aceta 99.7 3.8E-16 8.3E-21 123.3 12.1 106 18-130 13-120 (273)
29 COG2267 PldB Lysophospholipase 99.7 1.2E-15 2.6E-20 121.7 14.4 110 21-135 32-145 (298)
30 PF12695 Abhydrolase_5: Alpha/ 99.7 5.6E-15 1.2E-19 105.2 16.5 118 25-163 1-119 (145)
31 PLN02679 hydrolase, alpha/beta 99.7 3.7E-16 7.9E-21 128.0 11.5 102 23-131 88-190 (360)
32 PRK11126 2-succinyl-6-hydroxy- 99.7 6.4E-16 1.4E-20 119.3 12.3 99 23-131 2-101 (242)
33 PF12697 Abhydrolase_6: Alpha/ 99.7 2.8E-16 6.1E-21 118.5 10.0 102 26-133 1-102 (228)
34 PRK03204 haloalkane dehalogena 99.7 4E-16 8.6E-21 124.0 11.0 103 22-131 33-135 (286)
35 TIGR03101 hydr2_PEP hydrolase, 99.7 1.7E-15 3.6E-20 118.6 14.2 111 21-133 23-135 (266)
36 COG1647 Esterase/lipase [Gener 99.7 1.5E-15 3.2E-20 112.7 13.0 141 24-171 16-204 (243)
37 KOG1454 Predicted hydrolase/ac 99.7 2E-15 4.3E-20 121.7 13.2 105 21-131 56-165 (326)
38 PLN02652 hydrolase; alpha/beta 99.7 8.1E-15 1.7E-19 121.2 17.1 107 20-131 133-244 (395)
39 PRK10566 esterase; Provisional 99.7 7.2E-15 1.6E-19 114.2 15.4 146 22-171 26-209 (249)
40 KOG2984 Predicted hydrolase [G 99.7 2.2E-16 4.9E-21 115.5 6.2 191 4-200 20-272 (277)
41 TIGR01840 esterase_phb esteras 99.6 9.6E-15 2.1E-19 111.2 15.0 148 21-171 11-191 (212)
42 PRK13604 luxD acyl transferase 99.6 1.9E-14 4.1E-19 113.8 17.0 145 21-172 35-226 (307)
43 PRK05077 frsA fermentation/res 99.6 1.4E-14 2.9E-19 120.6 16.7 109 20-133 191-301 (414)
44 PRK00175 metX homoserine O-ace 99.6 8.4E-15 1.8E-19 120.8 15.0 109 23-131 48-181 (379)
45 PLN03084 alpha/beta hydrolase 99.6 2.6E-15 5.6E-20 123.5 11.5 106 22-132 126-232 (383)
46 KOG1552 Predicted alpha/beta h 99.6 3.6E-15 7.9E-20 113.4 11.3 143 22-173 59-217 (258)
47 PRK11071 esterase YqiA; Provis 99.6 2.4E-14 5.2E-19 107.2 15.5 132 24-172 2-160 (190)
48 PRK10985 putative hydrolase; P 99.6 1.4E-14 2.9E-19 117.2 13.8 109 22-132 57-168 (324)
49 PLN02511 hydrolase 99.6 1.7E-14 3.7E-19 119.2 13.7 110 21-132 98-210 (388)
50 PLN02980 2-oxoglutarate decarb 99.6 1.7E-14 3.7E-19 136.6 15.3 104 22-130 1370-1478(1655)
51 PRK07581 hypothetical protein; 99.6 1.4E-14 3.1E-19 117.7 11.8 104 22-130 40-157 (339)
52 KOG4178 Soluble epoxide hydrol 99.6 2E-14 4.4E-19 112.9 10.9 109 19-133 40-149 (322)
53 PF02230 Abhydrolase_2: Phosph 99.6 9.6E-14 2.1E-18 106.0 14.4 148 18-171 9-178 (216)
54 TIGR02821 fghA_ester_D S-formy 99.6 7.7E-13 1.7E-17 104.6 18.0 178 21-201 40-269 (275)
55 PRK05855 short chain dehydroge 99.5 5.4E-14 1.2E-18 121.5 11.6 103 21-129 23-128 (582)
56 PRK11460 putative hydrolase; P 99.5 4.5E-13 9.8E-18 103.4 15.5 145 20-172 13-172 (232)
57 TIGR01607 PST-A Plasmodium sub 99.5 8.1E-14 1.8E-18 113.0 11.6 109 21-131 19-184 (332)
58 PLN02442 S-formylglutathione h 99.5 4.9E-13 1.1E-17 106.1 15.2 141 21-164 45-233 (283)
59 TIGR01249 pro_imino_pep_1 prol 99.5 8E-14 1.7E-18 111.8 10.7 101 23-130 27-128 (306)
60 KOG2564 Predicted acetyltransf 99.5 1.2E-13 2.6E-18 105.9 10.3 104 20-130 71-180 (343)
61 TIGR03230 lipo_lipase lipoprot 99.5 1.6E-12 3.5E-17 107.8 16.5 111 21-133 39-155 (442)
62 PLN00021 chlorophyllase 99.5 7.9E-13 1.7E-17 106.1 14.2 132 19-160 48-201 (313)
63 cd00707 Pancreat_lipase_like P 99.5 1E-12 2.2E-17 103.8 14.0 111 20-133 33-148 (275)
64 PRK08775 homoserine O-acetyltr 99.5 1.9E-13 4.1E-18 111.3 9.5 83 44-131 85-172 (343)
65 COG0400 Predicted esterase [Ge 99.5 2.5E-12 5.4E-17 96.8 14.6 143 18-169 13-167 (207)
66 TIGR03100 hydr1_PEP hydrolase, 99.5 2E-12 4.4E-17 102.2 14.3 109 22-133 25-135 (274)
67 PF01738 DLH: Dienelactone hyd 99.4 1.8E-11 3.9E-16 93.5 14.5 136 21-165 12-162 (218)
68 TIGR01836 PHA_synth_III_C poly 99.4 1.7E-12 3.8E-17 105.9 9.3 107 23-133 62-172 (350)
69 KOG4391 Predicted alpha/beta h 99.4 2.2E-12 4.8E-17 95.7 8.4 152 18-174 73-247 (300)
70 COG2945 Predicted hydrolase of 99.4 4.3E-11 9.3E-16 87.3 13.4 133 20-160 25-161 (210)
71 KOG1838 Alpha/beta hydrolase [ 99.3 6.1E-11 1.3E-15 96.4 14.3 109 21-133 123-236 (409)
72 COG1506 DAP2 Dipeptidyl aminop 99.3 2E-11 4.4E-16 106.6 12.5 146 23-171 394-574 (620)
73 PF00326 Peptidase_S9: Prolyl 99.3 6.7E-11 1.5E-15 89.9 13.4 119 53-171 13-167 (213)
74 PF06821 Ser_hydrolase: Serine 99.3 5.5E-11 1.2E-15 87.4 12.4 124 26-166 1-132 (171)
75 COG0412 Dienelactone hydrolase 99.3 3.4E-10 7.3E-15 87.5 17.3 138 22-168 26-178 (236)
76 PF07819 PGAP1: PGAP1-like pro 99.3 5.1E-11 1.1E-15 91.4 12.6 108 22-136 3-127 (225)
77 PF00561 Abhydrolase_1: alpha/ 99.3 1.5E-11 3.2E-16 93.6 8.6 77 55-131 1-78 (230)
78 COG0429 Predicted hydrolase of 99.3 1.1E-10 2.4E-15 92.0 12.1 112 19-133 71-186 (345)
79 PF10503 Esterase_phd: Esteras 99.2 4.3E-10 9.3E-15 85.6 14.0 141 22-165 15-186 (220)
80 TIGR00976 /NonD putative hydro 99.2 5.8E-11 1.3E-15 102.5 10.4 110 20-131 19-131 (550)
81 PF00975 Thioesterase: Thioest 99.2 2.2E-10 4.8E-15 87.8 11.8 100 25-133 2-105 (229)
82 COG3208 GrsT Predicted thioest 99.2 6.2E-10 1.3E-14 84.5 13.8 105 21-133 5-113 (244)
83 PF06500 DUF1100: Alpha/beta h 99.2 1.4E-10 3E-15 94.9 9.9 111 18-133 185-297 (411)
84 KOG2382 Predicted alpha/beta h 99.2 2.6E-10 5.7E-15 89.9 10.4 103 20-131 49-158 (315)
85 PF07859 Abhydrolase_3: alpha/ 99.2 2.1E-10 4.6E-15 86.9 9.3 99 26-132 1-110 (211)
86 COG0596 MhpC Predicted hydrola 99.2 4.4E-10 9.6E-15 85.6 11.2 100 23-132 21-123 (282)
87 PRK10162 acetyl esterase; Prov 99.2 4.7E-10 1E-14 90.5 11.6 106 20-132 78-195 (318)
88 PF03403 PAF-AH_p_II: Platelet 99.2 7.1E-10 1.5E-14 91.2 12.7 129 21-158 98-284 (379)
89 TIGR01838 PHA_synth_I poly(R)- 99.2 8.5E-10 1.8E-14 94.1 13.4 109 22-133 187-303 (532)
90 PRK10115 protease 2; Provision 99.1 1.1E-09 2.4E-14 96.6 12.9 151 20-172 442-630 (686)
91 PRK06765 homoserine O-acetyltr 99.1 3.7E-10 8E-15 93.3 9.0 106 22-130 55-194 (389)
92 PF12740 Chlorophyllase2: Chlo 99.1 9.5E-10 2.1E-14 85.0 10.6 103 19-132 13-131 (259)
93 COG3545 Predicted esterase of 99.1 4.4E-09 9.4E-14 75.9 12.9 129 24-170 3-138 (181)
94 PLN02872 triacylglycerol lipas 99.1 2.4E-10 5.2E-15 94.5 6.9 105 22-131 73-196 (395)
95 PF05728 UPF0227: Uncharacteri 99.1 5.4E-09 1.2E-13 77.8 12.9 129 26-171 2-157 (187)
96 PF05990 DUF900: Alpha/beta hy 99.1 5E-09 1.1E-13 80.8 13.2 140 20-160 15-165 (233)
97 KOG4667 Predicted esterase [Li 99.1 8.2E-09 1.8E-13 76.8 13.1 160 21-184 31-235 (269)
98 KOG2112 Lysophospholipase [Lip 99.0 6.4E-09 1.4E-13 77.1 12.1 141 23-169 3-165 (206)
99 KOG3253 Predicted alpha/beta h 99.0 1.8E-09 4E-14 90.7 10.1 150 20-171 173-326 (784)
100 PF06342 DUF1057: Alpha/beta h 99.0 6.7E-09 1.5E-13 80.5 12.1 108 18-133 30-138 (297)
101 TIGR03502 lipase_Pla1_cef extr 99.0 4E-09 8.7E-14 93.0 11.2 92 22-118 448-576 (792)
102 PF00151 Lipase: Lipase; Inte 99.0 7.1E-09 1.5E-13 83.8 11.6 111 20-133 68-188 (331)
103 COG0657 Aes Esterase/lipase [L 99.0 6E-09 1.3E-13 83.8 10.4 103 22-132 78-191 (312)
104 PF03959 FSH1: Serine hydrolas 99.0 7.8E-09 1.7E-13 78.7 10.3 145 22-168 3-181 (212)
105 COG4099 Predicted peptidase [G 99.0 1E-08 2.3E-13 79.7 10.7 135 21-168 188-335 (387)
106 PF10230 DUF2305: Uncharacteri 98.9 2.4E-08 5.1E-13 78.6 12.9 109 23-133 2-123 (266)
107 KOG3847 Phospholipase A2 (plat 98.9 1.2E-08 2.5E-13 79.9 10.7 129 20-157 115-296 (399)
108 COG3319 Thioesterase domains o 98.9 2.2E-08 4.7E-13 77.8 11.2 101 24-133 1-104 (257)
109 PLN02733 phosphatidylcholine-s 98.9 9E-09 2E-13 86.0 9.7 92 43-136 109-205 (440)
110 PF01674 Lipase_2: Lipase (cla 98.9 2.1E-08 4.6E-13 76.3 10.3 89 25-118 3-96 (219)
111 COG3458 Acetyl esterase (deace 98.9 9.8E-09 2.1E-13 78.9 8.4 146 21-172 81-283 (321)
112 PRK07868 acyl-CoA synthetase; 98.9 1.2E-08 2.6E-13 93.8 10.6 104 22-132 66-177 (994)
113 PF05448 AXE1: Acetyl xylan es 98.9 2.7E-08 5.9E-13 80.1 11.3 166 20-191 80-306 (320)
114 KOG1515 Arylacetamide deacetyl 98.9 3E-08 6.5E-13 80.0 11.3 109 21-133 88-208 (336)
115 PF07224 Chlorophyllase: Chlor 98.9 1.9E-08 4E-13 77.1 9.0 103 19-132 42-157 (307)
116 PF05057 DUF676: Putative seri 98.9 2.5E-08 5.4E-13 76.2 9.8 113 21-135 2-128 (217)
117 PF12048 DUF3530: Protein of u 98.9 5E-07 1.1E-11 72.6 17.5 137 20-158 84-256 (310)
118 COG2021 MET2 Homoserine acetyl 98.8 1E-08 2.2E-13 82.2 7.2 108 22-132 50-182 (368)
119 PF06028 DUF915: Alpha/beta hy 98.8 7.9E-08 1.7E-12 74.9 11.8 112 22-135 10-146 (255)
120 PF02129 Peptidase_S15: X-Pro 98.8 4.3E-08 9.3E-13 77.4 10.5 113 19-133 16-137 (272)
121 PF08538 DUF1749: Protein of u 98.8 1.1E-07 2.5E-12 75.0 11.8 106 22-131 32-147 (303)
122 COG4782 Uncharacterized protei 98.7 3.2E-07 7E-12 73.5 13.0 111 21-132 114-234 (377)
123 TIGR01839 PHA_synth_II poly(R) 98.7 7.9E-08 1.7E-12 81.8 9.4 106 21-133 213-329 (560)
124 KOG4627 Kynurenine formamidase 98.7 7.3E-08 1.6E-12 71.4 7.9 135 20-160 64-219 (270)
125 COG3509 LpqC Poly(3-hydroxybut 98.7 1.1E-07 2.3E-12 74.2 8.9 110 21-132 59-179 (312)
126 PRK10439 enterobactin/ferric e 98.7 1.5E-06 3.2E-11 72.5 16.1 111 21-132 207-323 (411)
127 PF05677 DUF818: Chlamydia CHL 98.7 6.5E-07 1.4E-11 71.4 12.2 137 19-159 133-301 (365)
128 PRK10252 entF enterobactin syn 98.6 4.4E-07 9.5E-12 85.7 12.8 98 23-130 1068-1169(1296)
129 cd00312 Esterase_lipase Estera 98.6 1.7E-07 3.7E-12 80.0 8.4 110 21-132 93-213 (493)
130 PF03096 Ndr: Ndr family; Int 98.6 2.5E-07 5.4E-12 72.4 8.1 111 21-131 21-133 (283)
131 PRK05371 x-prolyl-dipeptidyl a 98.6 2.1E-06 4.7E-11 76.7 14.8 85 44-130 271-371 (767)
132 PF06057 VirJ: Bacterial virul 98.5 2.1E-06 4.5E-11 63.4 11.5 129 24-160 3-151 (192)
133 KOG2931 Differentiation-relate 98.5 6.8E-07 1.5E-11 69.6 9.2 111 21-131 44-156 (326)
134 COG1075 LipA Predicted acetylt 98.5 3.9E-07 8.5E-12 74.1 8.3 104 23-135 59-167 (336)
135 PF12146 Hydrolase_4: Putative 98.5 5E-07 1.1E-11 57.7 6.9 62 22-87 15-78 (79)
136 PF00756 Esterase: Putative es 98.5 3.9E-07 8.4E-12 70.8 7.8 53 79-131 94-149 (251)
137 PF10340 DUF2424: Protein of u 98.5 3.2E-06 6.9E-11 68.9 12.4 110 22-133 121-236 (374)
138 KOG1553 Predicted alpha/beta h 98.5 3.5E-07 7.6E-12 72.8 6.4 100 21-129 241-342 (517)
139 PF00135 COesterase: Carboxyle 98.5 9E-07 2E-11 76.0 8.8 108 22-132 124-245 (535)
140 KOG3043 Predicted hydrolase re 98.4 2E-06 4.3E-11 64.6 8.7 128 23-161 39-177 (242)
141 PF12715 Abhydrolase_7: Abhydr 98.4 1.5E-06 3.2E-11 70.6 8.6 108 20-130 112-258 (390)
142 PF09752 DUF2048: Uncharacteri 98.4 5E-06 1.1E-10 66.9 11.3 104 21-131 90-209 (348)
143 KOG2100 Dipeptidyl aminopeptid 98.4 2.8E-06 6.1E-11 75.8 10.8 149 19-168 522-702 (755)
144 COG4814 Uncharacterized protei 98.4 3.3E-06 7.1E-11 64.6 9.4 104 24-133 46-177 (288)
145 PLN02633 palmitoyl protein thi 98.3 1.7E-05 3.6E-10 62.9 11.8 104 24-133 26-132 (314)
146 COG4188 Predicted dienelactone 98.3 6E-06 1.3E-10 66.7 9.0 93 21-117 69-179 (365)
147 cd00741 Lipase Lipase. Lipase 98.2 1.2E-05 2.7E-10 57.8 9.4 82 79-160 10-95 (153)
148 smart00824 PKS_TE Thioesterase 98.2 2.4E-05 5.3E-10 58.4 11.4 86 43-132 14-102 (212)
149 PLN02606 palmitoyl-protein thi 98.2 4E-05 8.7E-10 60.7 11.9 105 24-134 27-134 (306)
150 KOG2281 Dipeptidyl aminopeptid 98.2 6.3E-06 1.4E-10 70.5 7.8 142 20-161 639-815 (867)
151 PF02089 Palm_thioest: Palmito 98.2 5.8E-06 1.3E-10 64.8 7.2 106 24-133 6-117 (279)
152 KOG2551 Phospholipase/carboxyh 98.2 7.2E-05 1.6E-09 56.3 12.3 68 100-168 107-183 (230)
153 KOG3101 Esterase D [General fu 98.2 2.8E-06 6.1E-11 63.3 4.6 110 20-132 41-176 (283)
154 PRK04940 hypothetical protein; 98.2 2.7E-05 5.8E-10 57.3 9.7 129 26-171 2-147 (180)
155 PF08840 BAAT_C: BAAT / Acyl-C 98.2 3.2E-05 6.9E-10 58.9 10.5 50 81-131 4-55 (213)
156 KOG2624 Triglyceride lipase-ch 98.2 4.4E-06 9.6E-11 69.0 6.1 109 21-132 71-199 (403)
157 PF02450 LCAT: Lecithin:choles 98.2 2.1E-05 4.6E-10 65.3 10.2 60 77-137 100-165 (389)
158 COG4757 Predicted alpha/beta h 98.1 1.6E-05 3.5E-10 60.2 8.3 89 26-117 32-125 (281)
159 COG2272 PnbA Carboxylesterase 98.1 4.7E-06 1E-10 69.5 5.5 112 20-133 91-218 (491)
160 KOG3724 Negative regulator of 98.0 3.6E-05 7.7E-10 67.4 9.6 106 23-133 89-221 (973)
161 TIGR01849 PHB_depoly_PhaZ poly 98.0 5.2E-05 1.1E-09 62.9 10.2 102 24-133 103-209 (406)
162 PF05577 Peptidase_S28: Serine 98.0 9.8E-05 2.1E-09 62.2 11.3 106 23-133 29-149 (434)
163 KOG2565 Predicted hydrolases o 98.0 3.2E-05 6.9E-10 62.4 7.4 96 24-126 153-258 (469)
164 KOG2541 Palmitoyl protein thio 97.9 0.00029 6.3E-09 54.6 11.6 104 25-134 25-130 (296)
165 COG3150 Predicted esterase [Ge 97.9 8.2E-05 1.8E-09 53.6 8.0 88 26-130 2-89 (191)
166 PF11144 DUF2920: Protein of u 97.9 0.00023 4.9E-09 58.5 11.4 30 97-126 184-213 (403)
167 PF01083 Cutinase: Cutinase; 97.9 0.00017 3.7E-09 53.4 9.3 108 25-133 7-123 (179)
168 PTZ00472 serine carboxypeptida 97.8 0.00029 6.3E-09 59.8 11.0 109 21-131 75-215 (462)
169 PF01764 Lipase_3: Lipase (cla 97.7 0.00012 2.7E-09 51.6 6.4 56 78-133 45-106 (140)
170 COG0627 Predicted esterase [Ge 97.7 0.00024 5.3E-09 57.1 8.1 112 20-133 51-188 (316)
171 PF03583 LIP: Secretory lipase 97.7 0.00066 1.4E-08 54.2 10.3 78 51-132 23-113 (290)
172 COG2936 Predicted acyl esteras 97.6 0.00018 4E-09 61.5 7.0 113 19-133 41-160 (563)
173 COG3243 PhaC Poly(3-hydroxyalk 97.6 0.00031 6.8E-09 57.8 7.7 107 23-133 107-218 (445)
174 KOG3967 Uncharacterized conser 97.6 0.0007 1.5E-08 50.8 8.9 108 21-132 99-227 (297)
175 COG2819 Predicted hydrolase of 97.6 0.0018 3.8E-08 50.5 11.4 58 76-133 113-173 (264)
176 PF06259 Abhydrolase_8: Alpha/ 97.6 0.0095 2.1E-07 44.0 14.6 138 20-160 16-169 (177)
177 PF02273 Acyl_transf_2: Acyl t 97.6 0.00081 1.7E-08 51.6 9.0 100 21-129 28-131 (294)
178 KOG3975 Uncharacterized conser 97.5 0.0033 7.1E-08 48.4 11.8 110 19-130 25-145 (301)
179 KOG2369 Lecithin:cholesterol a 97.5 0.00015 3.2E-09 60.3 5.0 91 43-137 125-230 (473)
180 KOG2183 Prolylcarboxypeptidase 97.5 0.0006 1.3E-08 56.0 8.2 107 24-133 81-203 (492)
181 PF11288 DUF3089: Protein of u 97.5 0.00031 6.7E-09 52.9 6.1 81 53-133 44-137 (207)
182 PLN02517 phosphatidylcholine-s 97.5 0.00027 5.8E-09 60.7 6.3 60 77-136 193-267 (642)
183 cd00519 Lipase_3 Lipase (class 97.5 0.0004 8.6E-09 53.4 6.7 56 78-133 109-168 (229)
184 COG2382 Fes Enterochelin ester 97.5 0.0015 3.3E-08 51.6 9.8 113 20-133 95-213 (299)
185 PF11187 DUF2974: Protein of u 97.4 0.00056 1.2E-08 52.4 6.9 52 81-133 69-124 (224)
186 KOG4840 Predicted hydrolases o 97.4 0.00087 1.9E-08 50.7 6.9 105 22-130 35-142 (299)
187 KOG2237 Predicted serine prote 97.4 0.00018 3.9E-09 61.8 3.6 107 20-129 467-581 (712)
188 PLN00413 triacylglycerol lipas 97.2 0.0012 2.6E-08 55.4 7.0 54 81-134 268-329 (479)
189 PLN02162 triacylglycerol lipas 97.2 0.0012 2.6E-08 55.3 6.9 55 80-134 261-323 (475)
190 PF07082 DUF1350: Protein of u 97.2 0.0064 1.4E-07 46.9 10.1 104 21-130 15-123 (250)
191 PLN02454 triacylglycerol lipas 97.1 0.0021 4.5E-08 53.3 7.3 56 78-134 207-272 (414)
192 KOG1516 Carboxylesterase and r 97.1 0.002 4.4E-08 55.8 7.5 107 23-131 112-231 (545)
193 PLN02408 phospholipase A1 97.1 0.0043 9.2E-08 50.8 8.8 80 79-160 180-266 (365)
194 PF05277 DUF726: Protein of un 97.0 0.0051 1.1E-07 50.1 8.1 65 95-160 218-287 (345)
195 COG1770 PtrB Protease II [Amin 96.9 0.0031 6.8E-08 54.7 7.0 109 20-130 445-560 (682)
196 PLN02934 triacylglycerol lipas 96.8 0.0049 1.1E-07 52.3 7.1 55 80-134 304-366 (515)
197 PLN02310 triacylglycerol lipas 96.8 0.0083 1.8E-07 49.8 8.1 79 80-160 188-274 (405)
198 PF11339 DUF3141: Protein of u 96.8 0.022 4.7E-07 48.5 10.4 109 21-133 67-176 (581)
199 KOG4388 Hormone-sensitive lipa 96.7 0.01 2.2E-07 51.0 7.9 99 22-131 395-507 (880)
200 PLN02571 triacylglycerol lipas 96.6 0.0044 9.5E-08 51.5 5.6 39 79-117 206-246 (413)
201 PLN02324 triacylglycerol lipas 96.6 0.0092 2E-07 49.6 7.1 40 78-117 194-235 (415)
202 PLN03037 lipase class 3 family 96.6 0.014 3.1E-07 49.7 8.2 78 81-160 298-384 (525)
203 KOG2182 Hydrolytic enzymes of 96.5 0.052 1.1E-06 45.9 11.1 108 21-133 84-208 (514)
204 PF00450 Peptidase_S10: Serine 96.5 0.051 1.1E-06 45.3 11.4 107 20-132 37-181 (415)
205 PLN02802 triacylglycerol lipas 96.5 0.016 3.4E-07 49.3 8.0 54 81-134 312-372 (509)
206 KOG4569 Predicted lipase [Lipi 96.4 0.011 2.4E-07 48.2 6.5 52 81-132 155-212 (336)
207 PLN02847 triacylglycerol lipas 96.4 0.046 9.9E-07 47.4 10.1 36 82-117 236-271 (633)
208 PLN02719 triacylglycerol lipas 96.2 0.034 7.4E-07 47.3 8.4 80 79-160 275-370 (518)
209 COG4947 Uncharacterized protei 96.2 0.31 6.7E-06 35.7 12.0 57 76-132 80-136 (227)
210 PLN02753 triacylglycerol lipas 95.9 0.016 3.5E-07 49.4 5.4 39 79-117 289-332 (531)
211 PF05576 Peptidase_S37: PS-10 95.9 0.017 3.7E-07 47.8 5.3 107 20-133 60-170 (448)
212 COG1505 Serine proteases of th 95.9 0.025 5.3E-07 48.8 6.2 105 22-130 420-533 (648)
213 KOG1551 Uncharacterized conser 95.8 0.028 6E-07 43.9 5.8 104 20-129 110-227 (371)
214 PLN02761 lipase class 3 family 95.7 0.023 5E-07 48.5 5.3 39 79-117 270-314 (527)
215 COG3946 VirJ Type IV secretory 95.7 0.1 2.2E-06 43.1 8.8 88 23-119 260-348 (456)
216 KOG4372 Predicted alpha/beta h 95.3 0.02 4.3E-07 47.1 3.7 92 20-116 77-169 (405)
217 PF08237 PE-PPE: PE-PPE domain 95.1 0.13 2.7E-06 39.6 7.3 79 54-132 2-89 (225)
218 KOG2029 Uncharacterized conser 95.0 0.069 1.5E-06 46.1 5.9 39 96-134 525-574 (697)
219 PF04301 DUF452: Protein of un 94.9 0.096 2.1E-06 39.8 6.0 78 23-131 11-89 (213)
220 KOG2385 Uncharacterized conser 94.2 0.27 5.8E-06 42.0 7.6 42 94-135 444-490 (633)
221 KOG4540 Putative lipase essent 93.6 0.15 3.3E-06 40.3 4.8 39 80-118 259-297 (425)
222 COG5153 CVT17 Putative lipase 93.6 0.15 3.3E-06 40.3 4.8 39 80-118 259-297 (425)
223 TIGR03712 acc_sec_asp2 accesso 93.4 0.69 1.5E-05 39.4 8.7 103 18-131 284-388 (511)
224 PF05705 DUF829: Eukaryotic pr 93.3 0.98 2.1E-05 34.8 9.1 98 26-132 2-112 (240)
225 COG3673 Uncharacterized conser 92.4 4.6 9.9E-05 32.8 11.5 99 18-117 26-142 (423)
226 PF09994 DUF2235: Uncharacteri 92.4 1.6 3.5E-05 34.6 9.3 38 80-117 74-112 (277)
227 PLN03016 sinapoylglucose-malat 92.3 1.4 3E-05 37.4 9.1 111 21-131 64-209 (433)
228 KOG1202 Animal-type fatty acid 91.1 1.6 3.5E-05 41.4 8.7 96 20-131 2120-2218(2376)
229 KOG1282 Serine carboxypeptidas 90.1 3.4 7.4E-05 35.2 9.3 101 21-127 71-208 (454)
230 KOG4389 Acetylcholinesterase/B 88.4 1.8 3.8E-05 37.1 6.3 112 21-132 133-255 (601)
231 PLN02209 serine carboxypeptida 87.6 4.7 0.0001 34.3 8.6 109 21-131 66-211 (437)
232 KOG1283 Serine carboxypeptidas 86.8 3.5 7.5E-05 33.5 6.8 108 21-129 29-163 (414)
233 PLN02213 sinapoylglucose-malat 84.6 5.7 0.00012 32.2 7.4 75 56-130 3-94 (319)
234 PF04083 Abhydro_lipase: Parti 84.3 0.91 2E-05 27.4 2.1 18 19-36 39-56 (63)
235 PF07519 Tannase: Tannase and 84.1 2.5 5.5E-05 36.3 5.4 84 49-132 54-150 (474)
236 PF10142 PhoPQ_related: PhoPQ- 83.2 4.7 0.0001 33.4 6.4 101 84-185 156-300 (367)
237 COG3340 PepE Peptidase E [Amin 82.5 3.4 7.4E-05 31.4 4.9 40 22-63 31-71 (224)
238 COG2939 Carboxypeptidase C (ca 79.6 9.9 0.00021 32.7 7.2 110 22-133 100-237 (498)
239 PF09949 DUF2183: Uncharacteri 77.6 15 0.00031 24.4 6.2 44 83-126 51-96 (100)
240 PRK05282 (alpha)-aspartyl dipe 77.5 18 0.00039 28.0 7.6 92 22-116 30-131 (233)
241 PRK12467 peptide synthase; Pro 75.4 27 0.00058 38.3 10.4 98 23-129 3692-3792(3956)
242 PF03283 PAE: Pectinacetyleste 74.5 9.1 0.0002 31.7 5.6 37 81-117 138-176 (361)
243 COG1073 Hydrolases of the alph 72.2 2 4.4E-05 33.3 1.3 32 145-176 228-260 (299)
244 COG0529 CysC Adenylylsulfate k 72.1 38 0.00083 25.3 8.6 40 21-62 20-59 (197)
245 KOG2521 Uncharacterized conser 70.9 35 0.00076 28.2 8.1 104 23-132 39-152 (350)
246 PF06309 Torsin: Torsin; Inte 69.2 36 0.00077 23.7 7.9 20 18-37 47-66 (127)
247 KOG0781 Signal recognition par 64.6 34 0.00075 29.6 6.9 87 27-128 442-538 (587)
248 PLN02965 Probable pheophorbida 62.4 12 0.00025 28.8 3.8 57 144-200 189-249 (255)
249 COG1506 DAP2 Dipeptidyl aminop 59.6 43 0.00094 29.9 7.2 67 21-93 549-616 (620)
250 TIGR03131 malonate_mdcH malona 58.9 19 0.00042 28.5 4.5 30 87-116 66-95 (295)
251 COG4553 DepA Poly-beta-hydroxy 58.9 98 0.0021 25.2 9.1 107 21-135 101-212 (415)
252 PF08484 Methyltransf_14: C-me 57.9 45 0.00098 24.1 5.9 49 79-127 49-99 (160)
253 smart00827 PKS_AT Acyl transfe 56.3 22 0.00047 28.1 4.5 28 89-116 74-101 (298)
254 PF06441 EHN: Epoxide hydrolas 56.3 6.4 0.00014 26.7 1.1 28 9-36 72-105 (112)
255 PF01583 APS_kinase: Adenylyls 55.8 75 0.0016 22.9 7.1 39 23-63 1-39 (156)
256 COG3887 Predicted signaling pr 54.6 46 0.00099 29.5 6.2 53 75-130 318-376 (655)
257 PRK11126 2-succinyl-6-hydroxy- 54.6 12 0.00027 28.1 2.7 53 142-200 182-238 (242)
258 PF00698 Acyl_transf_1: Acyl t 53.2 14 0.0003 29.8 2.9 29 87-115 74-102 (318)
259 PRK08775 homoserine O-acetyltr 52.4 13 0.00028 30.2 2.6 57 144-200 273-335 (343)
260 KOG1532 GTPase XAB1, interacts 52.2 1.3E+02 0.0027 24.4 11.2 140 19-160 14-193 (366)
261 PLN02679 hydrolase, alpha/beta 52.1 14 0.0003 30.4 2.7 58 143-200 287-353 (360)
262 KOG2170 ATPase of the AAA+ sup 51.1 1E+02 0.0023 25.1 7.2 32 18-49 104-135 (344)
263 TIGR00128 fabD malonyl CoA-acy 51.1 28 0.00061 27.4 4.3 27 90-116 75-102 (290)
264 PF10081 Abhydrolase_9: Alpha/ 50.0 1.3E+02 0.0029 24.1 10.9 81 53-133 60-148 (289)
265 COG0541 Ffh Signal recognition 48.9 1.7E+02 0.0038 25.1 10.4 106 21-128 97-247 (451)
266 PRK10824 glutaredoxin-4; Provi 48.8 84 0.0018 21.4 8.4 81 21-118 13-93 (115)
267 PRK10985 putative hydrolase; P 48.3 16 0.00035 29.4 2.5 22 142-163 249-270 (324)
268 PRK06765 homoserine O-acetyltr 48.2 35 0.00075 28.6 4.5 59 142-200 317-384 (389)
269 PLN02511 hydrolase 48.1 9.3 0.0002 31.8 1.1 22 143-164 293-314 (388)
270 PF03575 Peptidase_S51: Peptid 47.0 62 0.0013 23.0 5.2 22 41-64 2-23 (154)
271 PRK03204 haloalkane dehalogena 46.8 22 0.00048 28.0 3.1 53 148-200 227-284 (286)
272 COG2830 Uncharacterized protei 46.1 51 0.0011 24.2 4.4 77 23-130 11-88 (214)
273 COG3933 Transcriptional antite 45.9 83 0.0018 26.9 6.2 75 22-114 108-182 (470)
274 cd07207 Pat_ExoU_VipD_like Exo 42.4 49 0.0011 24.2 4.2 32 86-118 17-48 (194)
275 cd07212 Pat_PNPLA9 Patatin-lik 40.8 26 0.00056 28.4 2.6 18 100-117 35-52 (312)
276 TIGR01249 pro_imino_pep_1 prol 40.7 34 0.00073 27.2 3.3 39 145-183 244-283 (306)
277 PF02230 Abhydrolase_2: Phosph 40.6 1.4E+02 0.003 22.3 6.5 58 23-89 155-214 (216)
278 TIGR03707 PPK2_P_aer polyphosp 39.9 1.5E+02 0.0032 23.0 6.5 69 21-106 28-98 (230)
279 cd07198 Patatin Patatin-like p 39.9 58 0.0013 23.5 4.2 32 86-118 16-47 (172)
280 PF14253 AbiH: Bacteriophage a 39.4 17 0.00037 28.4 1.3 19 95-113 233-251 (270)
281 cd03129 GAT1_Peptidase_E_like 38.8 1.7E+02 0.0036 21.9 8.3 89 22-114 28-130 (210)
282 PRK13938 phosphoheptose isomer 38.2 1E+02 0.0022 23.1 5.3 24 95-118 44-67 (196)
283 TIGR03709 PPK2_rel_1 polyphosp 37.9 58 0.0013 25.8 4.1 40 21-63 53-93 (264)
284 PRK10279 hypothetical protein; 37.9 56 0.0012 26.4 4.0 32 86-118 23-54 (300)
285 PF00091 Tubulin: Tubulin/FtsZ 37.7 1.2E+02 0.0026 22.9 5.8 33 79-111 106-138 (216)
286 cd07210 Pat_hypo_W_succinogene 37.4 72 0.0016 24.3 4.5 32 86-118 18-49 (221)
287 PF12242 Eno-Rase_NADH_b: NAD( 36.9 81 0.0018 19.9 3.8 40 79-118 19-61 (78)
288 PRK03482 phosphoglycerate muta 36.6 1.3E+02 0.0028 22.5 5.8 36 76-113 122-157 (215)
289 cd03028 GRX_PICOT_like Glutare 36.4 1.1E+02 0.0025 19.3 7.8 79 22-117 7-85 (90)
290 PLN03084 alpha/beta hydrolase 36.4 51 0.0011 27.5 3.8 54 146-200 323-380 (383)
291 COG2082 CobH Precorrin isomera 35.9 2E+02 0.0043 22.0 7.6 73 86-160 118-191 (210)
292 PF00561 Abhydrolase_1: alpha/ 35.8 26 0.00057 25.7 1.8 42 143-184 170-211 (230)
293 TIGR00365 monothiol glutaredox 35.7 1.2E+02 0.0027 19.6 7.4 80 22-118 11-90 (97)
294 PF06833 MdcE: Malonate decarb 35.6 1.9E+02 0.004 22.5 6.3 63 53-117 64-129 (234)
295 cd07225 Pat_PNPLA6_PNPLA7 Pata 34.9 71 0.0015 25.8 4.3 31 86-117 33-63 (306)
296 cd07209 Pat_hypo_Ecoli_Z1214_l 34.8 97 0.0021 23.4 4.8 33 86-119 16-48 (215)
297 PRK10162 acetyl esterase; Prov 34.7 2.4E+02 0.0052 22.6 7.7 46 22-70 247-292 (318)
298 cd07224 Pat_like Patatin-like 34.6 78 0.0017 24.3 4.3 36 84-119 15-51 (233)
299 cd00382 beta_CA Carbonic anhyd 34.4 56 0.0012 22.2 3.1 30 83-112 45-74 (119)
300 COG1752 RssA Predicted esteras 34.1 69 0.0015 25.7 4.1 31 86-117 29-59 (306)
301 TIGR02690 resist_ArsH arsenica 34.1 1.2E+02 0.0027 23.2 5.2 39 23-63 26-66 (219)
302 KOG4530 Predicted flavoprotein 34.0 77 0.0017 23.1 3.8 61 41-117 77-137 (199)
303 PF09419 PGP_phosphatase: Mito 33.9 95 0.0021 22.7 4.4 50 53-107 39-88 (168)
304 cd05007 SIS_Etherase N-acetylm 33.6 1.3E+02 0.0028 23.6 5.5 47 81-127 33-87 (257)
305 TIGR02069 cyanophycinase cyano 33.5 2.3E+02 0.005 22.1 8.0 39 21-62 26-65 (250)
306 KOG1752 Glutaredoxin and relat 33.5 1.5E+02 0.0032 19.8 5.5 79 21-118 12-90 (104)
307 cd01714 ETF_beta The electron 32.7 79 0.0017 23.7 4.0 49 79-128 92-145 (202)
308 cd07208 Pat_hypo_Ecoli_yjju_li 32.3 48 0.001 25.9 2.9 33 86-119 16-49 (266)
309 cd07218 Pat_iPLA2 Calcium-inde 32.1 95 0.0021 24.2 4.4 34 86-119 18-52 (245)
310 COG0331 FabD (acyl-carrier-pro 31.8 69 0.0015 26.0 3.7 29 88-116 75-104 (310)
311 COG4667 Predicted esterase of 31.6 57 0.0012 26.0 3.0 42 85-126 28-69 (292)
312 cd07230 Pat_TGL4-5_like Triacy 31.5 53 0.0011 27.9 3.1 36 85-121 90-125 (421)
313 PRK04148 hypothetical protein; 31.1 1.4E+02 0.003 21.0 4.7 23 95-117 16-38 (134)
314 TIGR02816 pfaB_fam PfaB family 31.1 84 0.0018 27.7 4.3 25 92-116 260-284 (538)
315 cd07205 Pat_PNPLA6_PNPLA7_NTE1 29.2 1.6E+02 0.0035 21.1 5.1 32 86-118 18-49 (175)
316 cd00883 beta_CA_cladeA Carboni 29.2 80 0.0017 23.3 3.4 33 83-115 67-99 (182)
317 cd07227 Pat_Fungal_NTE1 Fungal 28.9 1E+02 0.0022 24.5 4.1 31 86-117 28-58 (269)
318 PF00484 Pro_CA: Carbonic anhy 28.6 1.7E+02 0.0038 20.5 5.0 36 80-115 38-73 (153)
319 PRK00414 gmhA phosphoheptose i 28.5 1.9E+02 0.0041 21.5 5.4 37 81-117 28-65 (192)
320 PRK05441 murQ N-acetylmuramic 28.4 1.7E+02 0.0038 23.5 5.5 36 82-117 47-83 (299)
321 PF01734 Patatin: Patatin-like 28.2 57 0.0012 23.2 2.6 20 98-117 28-47 (204)
322 COG1576 Uncharacterized conser 28.2 1.7E+02 0.0037 21.1 4.7 53 45-110 58-111 (155)
323 PF06792 UPF0261: Uncharacteri 28.0 3.8E+02 0.0082 22.8 9.3 83 43-127 19-125 (403)
324 cd07232 Pat_PLPL Patain-like p 27.7 63 0.0014 27.3 3.0 36 84-120 83-118 (407)
325 cd07228 Pat_NTE_like_bacteria 27.3 1.4E+02 0.003 21.6 4.4 32 86-118 18-49 (175)
326 COG4088 Predicted nucleotide k 27.1 3E+02 0.0065 21.4 6.7 104 25-133 2-113 (261)
327 PF08433 KTI12: Chromatin asso 26.7 2.8E+02 0.006 22.0 6.3 103 25-132 2-109 (270)
328 COG1448 TyrB Aspartate/tyrosin 26.4 3.2E+02 0.0069 23.0 6.6 91 22-129 170-262 (396)
329 PRK13936 phosphoheptose isomer 26.2 2.1E+02 0.0045 21.3 5.3 34 85-118 31-65 (197)
330 COG0429 Predicted hydrolase of 26.1 55 0.0012 26.9 2.2 22 143-164 269-290 (345)
331 PF01341 Glyco_hydro_6: Glycos 25.9 2.7E+02 0.0058 22.6 6.0 48 55-102 63-113 (298)
332 cd00884 beta_CA_cladeB Carboni 25.8 94 0.002 23.2 3.3 33 83-115 73-105 (190)
333 PF15566 Imm18: Immunity prote 25.6 1E+02 0.0023 17.8 2.7 30 80-109 4-33 (52)
334 PRK11460 putative hydrolase; P 25.6 3E+02 0.0065 20.9 7.2 45 23-69 148-193 (232)
335 cd07211 Pat_PNPLA8 Patatin-lik 24.6 61 0.0013 26.0 2.3 17 100-116 44-60 (308)
336 COG0552 FtsY Signal recognitio 24.4 4.1E+02 0.0089 22.0 8.4 117 27-154 197-317 (340)
337 COG0431 Predicted flavoprotein 24.3 2E+02 0.0043 21.1 4.8 62 42-117 59-121 (184)
338 PF13580 SIS_2: SIS domain; PD 24.3 2.3E+02 0.0049 19.6 4.9 34 84-117 22-56 (138)
339 TIGR01836 PHA_synth_III_C poly 24.3 1.1E+02 0.0024 24.9 3.8 28 144-171 282-309 (350)
340 PLN03006 carbonate dehydratase 24.0 1E+02 0.0022 25.0 3.3 32 83-114 158-189 (301)
341 cd07213 Pat17_PNPLA8_PNPLA9_li 24.0 70 0.0015 25.4 2.5 18 100-117 37-54 (288)
342 KOG4153 Fructose 1,6-bisphosph 23.6 1.6E+02 0.0036 23.4 4.3 35 20-61 254-288 (358)
343 PRK10886 DnaA initiator-associ 23.3 2.7E+02 0.0058 20.9 5.3 36 82-117 26-62 (196)
344 PRK15219 carbonic anhydrase; P 23.0 58 0.0013 25.4 1.8 33 83-115 129-161 (245)
345 cd07204 Pat_PNPLA_like Patatin 23.0 91 0.002 24.2 2.9 20 100-119 34-53 (243)
346 cd03379 beta_CA_cladeD Carboni 22.9 1.2E+02 0.0025 21.3 3.2 29 83-111 42-70 (142)
347 TIGR03162 ribazole_cobC alpha- 22.9 2.9E+02 0.0062 19.7 6.0 31 75-105 116-146 (177)
348 PF10561 UPF0565: Uncharacteri 22.9 81 0.0017 25.5 2.6 36 98-133 194-245 (303)
349 cd07217 Pat17_PNPLA8_PNPLA9_li 22.4 81 0.0018 26.0 2.6 18 100-117 44-61 (344)
350 COG4822 CbiK Cobalamin biosynt 22.3 3.6E+02 0.0077 20.9 5.7 41 21-64 136-177 (265)
351 cd07221 Pat_PNPLA3 Patatin-lik 22.0 1.7E+02 0.0037 22.9 4.2 22 98-119 33-54 (252)
352 PF11713 Peptidase_C80: Peptid 22.0 27 0.0006 25.2 -0.2 32 78-109 77-116 (157)
353 PF02590 SPOUT_MTase: Predicte 21.9 2.6E+02 0.0056 20.1 4.8 49 48-107 61-109 (155)
354 cd07229 Pat_TGL3_like Triacylg 21.3 1.1E+02 0.0025 25.7 3.2 34 86-120 101-134 (391)
355 PLN00416 carbonate dehydratase 21.3 1.4E+02 0.0029 23.6 3.5 33 83-115 126-158 (258)
356 PF03976 PPK2: Polyphosphate k 21.3 47 0.001 25.6 0.9 39 22-63 29-68 (228)
357 PF01656 CbiA: CobQ/CobB/MinD/ 21.2 1.6E+02 0.0034 21.2 3.8 35 27-63 2-36 (195)
358 KOG1115 Ceramide kinase [Lipid 21.0 2.3E+02 0.0049 24.2 4.8 45 20-64 156-201 (516)
359 PRK00889 adenylylsulfate kinas 20.9 2.4E+02 0.0051 20.2 4.6 37 23-61 3-39 (175)
360 COG3946 VirJ Type IV secretory 20.7 5.4E+02 0.012 22.1 6.9 107 18-129 43-154 (456)
361 cd05312 NAD_bind_1_malic_enz N 20.3 2.1E+02 0.0045 22.9 4.4 21 97-117 105-126 (279)
362 PRK13937 phosphoheptose isomer 20.1 3.2E+02 0.0069 20.1 5.2 35 81-115 22-57 (188)
No 1
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.88 E-value=8.9e-22 Score=138.55 Aligned_cols=165 Identities=30% Similarity=0.430 Sum_probs=140.5
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCC---CCCCCCCCcHHHHHHHHHHHHHHHHHhCCC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIA---GGKRKAPPKAEKLVEFHTDVVKGAVAKFPG 96 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g---~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (203)
+...-+||+-||.|.+++++.+...+..+.. .|+.|..+++|++- .+.++++....+...++...+.++......
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~--~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~ 88 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALAR--RGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE 88 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHh--CceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC
Confidence 3445679999999999999998888887766 89999999999853 233334544455666777778888888777
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC--CCCccchhhhhhccCCCEEEEEeCCCCCCChHHHHHHHHHH
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK--GMNGAVRDELLLQITVPIMFVQVPFLLSLSNIIEKEFYLLV 174 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~--~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l~ 174 (203)
.+.++-|+||||.++..++......|++++|++.|+. +++++.+.+++..+++|++++||++|+ +.+..++..|.+.
T Consensus 89 gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~-fGtr~~Va~y~ls 167 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDE-FGTRDEVAGYALS 167 (213)
T ss_pred CceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccchhhhccCCCCCeEEeeccccc-ccCHHHHHhhhcC
Confidence 8999999999999999999987677999999999987 788899999999999999999999999 9999999999999
Q ss_pred HHHhhhcccCCCC
Q 028834 175 MVLKLSKLSDLWS 187 (203)
Q Consensus 175 ~~~~~~~~~~~~~ 187 (203)
..+.+.|+.+.-|
T Consensus 168 ~~iev~wl~~adH 180 (213)
T COG3571 168 DPIEVVWLEDADH 180 (213)
T ss_pred CceEEEEeccCcc
Confidence 9999999986543
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=1.6e-19 Score=143.65 Aligned_cols=105 Identities=17% Similarity=0.251 Sum_probs=83.4
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCC----cHHHHHHHHHHHHHHHHHhCCCC
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP----KAEKLVEFHTDVVKGAVAKFPGH 97 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~ 97 (203)
..++|||+||++.+.. .|+..+..++..++|+++|+||+|.+...... ...+..+++++.+..+++..+.+
T Consensus 28 ~~~~vlllHG~~~~~~-----~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~ 102 (294)
T PLN02824 28 SGPALVLVHGFGGNAD-----HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGD 102 (294)
T ss_pred CCCeEEEECCCCCChh-----HHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCC
Confidence 3578999999988763 57777777766789999999997543321110 12356778888888888887888
Q ss_pred cEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+++|+||||||.+++.++.++|++|+++|+++++
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~ 136 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINIS 136 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCC
Confidence 9999999999999999999999999999999864
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.81 E-value=1e-18 Score=137.91 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=82.2
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
++.++|||+||++++.. .|...+..+..+|.|+++|+||+|.+. .+. .....+++.+.+..+++..+.++++
T Consensus 23 ~~~~plvllHG~~~~~~-----~w~~~~~~L~~~~~vi~~Dl~G~G~S~--~~~-~~~~~~~~~~~~~~~i~~l~~~~~~ 94 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLE-----LVFPFIEALDPDLEVIAFDVPGVGGSS--TPR-HPYRFPGLAKLAARMLDYLDYGQVN 94 (276)
T ss_pred CCCCcEEEEeCCCcchH-----HHHHHHHHhccCceEEEECCCCCCCCC--CCC-CcCcHHHHHHHHHHHHHHhCcCceE
Confidence 34568999999987753 577777777778999999999975433 221 2245667777777778877778999
Q ss_pred EEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
|+||||||.+++.+|.++|++++++|+++++
T Consensus 95 LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~ 125 (276)
T TIGR02240 95 AIGVSWGGALAQQFAHDYPERCKKLILAATA 125 (276)
T ss_pred EEEECHHHHHHHHHHHHCHHHhhheEEeccC
Confidence 9999999999999999999999999999754
No 4
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.79 E-value=1.7e-18 Score=133.89 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=79.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
.++|+||++||++++.. .|...+..+..+|.|+++|+||+|.+.. ........+++.+.+.++++..+.++++
T Consensus 11 ~~~~~iv~lhG~~~~~~-----~~~~~~~~l~~~~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS-----YWAPQLDVLTQRFHVVTYDHRGTGRSPG--ELPPGYSIAHMADDVLQLLDALNIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcchh-----HHHHHHHHHHhccEEEEEcCCCCCCCCC--CCcccCCHHHHHHHHHHHHHHhCCCcEE
Confidence 45788999999987752 4555555555689999999999754332 2222345566666777777777778999
Q ss_pred EEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
++||||||.+++.++.++|+.++++|++++
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred EEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 999999999999999999999999998875
No 5
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.79 E-value=5.7e-18 Score=133.64 Aligned_cols=106 Identities=18% Similarity=0.234 Sum_probs=74.2
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhc-CCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l-~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
+.++|||+||++.+. ..|. .+.+.+..+ ..+|.|+++|+||+|.+... ....... ....+.+..+++..+.++++
T Consensus 29 ~~~~ivllHG~~~~~-~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~-~~~~~~~-~~~~~~l~~~l~~l~~~~~~ 104 (282)
T TIGR03343 29 NGEAVIMLHGGGPGA-GGWS-NYYRNIGPFVDAGYRVILKDSPGFNKSDAV-VMDEQRG-LVNARAVKGLMDALDIEKAH 104 (282)
T ss_pred CCCeEEEECCCCCch-hhHH-HHHHHHHHHHhCCCEEEEECCCCCCCCCCC-cCccccc-chhHHHHHHHHHHcCCCCee
Confidence 457899999988664 2232 121222222 36899999999997543321 1111111 13455666777777888999
Q ss_pred EEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
++||||||.+++.++.++|++++++|+++++
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 9999999999999999999999999998764
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.79 E-value=7.9e-18 Score=134.55 Aligned_cols=103 Identities=12% Similarity=0.138 Sum_probs=80.6
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
..++|||+||++.+.. .|...+..|. .+|.|+++|+||+|.+.. +........+++.+.+..+++..+.++++
T Consensus 45 ~~~~lvliHG~~~~~~-----~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~-~~~~~~~~~~~~a~~l~~~l~~l~~~~v~ 118 (302)
T PRK00870 45 DGPPVLLLHGEPSWSY-----LYRKMIPILAAAGHRVIAPDLIGFGRSDK-PTRREDYTYARHVEWMRSWFEQLDLTDVT 118 (302)
T ss_pred CCCEEEEECCCCCchh-----hHHHHHHHHHhCCCEEEEECCCCCCCCCC-CCCcccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3578999999976642 4666666665 689999999999754322 11112345667777777788887888999
Q ss_pred EEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
|+||||||.++..++.++|+++.++|++++
T Consensus 119 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 119 LVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred EEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 999999999999999999999999999975
No 7
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.78 E-value=8.9e-18 Score=131.82 Aligned_cols=103 Identities=19% Similarity=0.290 Sum_probs=80.1
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
+.++|||+||++++.. .|......+.++|.|+++|+||+|... .+.......+++++.+.++++..+.++++|
T Consensus 27 ~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~~~vi~~D~~G~G~S~--~~~~~~~~~~~~~~~l~~~i~~~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGASTH-----SWRDLMPPLARSFRVVAPDLPGHGFTR--APFRFRFTLPSMAEDLSALCAAEGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCCCHH-----HHHHHHHHHhhCcEEEeecCCCCCCCC--CccccCCCHHHHHHHHHHHHHHcCCCCceE
Confidence 4688999999987652 466666666678999999999965332 222222456677777777777777788999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+||||||.+++.++.+.|++++++|++++.
T Consensus 100 vG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~ 129 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPVTPRMVVGINAA 129 (278)
T ss_pred EEECccHHHHHHHHHhCCcccceEEEEcCc
Confidence 999999999999999999999999988754
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.78 E-value=2e-17 Score=130.39 Aligned_cols=111 Identities=21% Similarity=0.243 Sum_probs=80.6
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCC--CCcHHHHHHHHHHHHHHHHHhCC
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAKFP 95 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~--~~~~~~~~~~~~~~i~~~~~~~~ 95 (203)
++..++++|+++||++.+.. .| ..+.+.+.. .||.|+++|+||+|.+.... ........+++.+.+..+.+...
T Consensus 20 ~~~~~~~~v~llHG~~~~~~-~~-~~~~~~l~~--~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~ 95 (276)
T PHA02857 20 PITYPKALVFISHGAGEHSG-RY-EELAENISS--LGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYP 95 (276)
T ss_pred CCCCCCEEEEEeCCCccccc-hH-HHHHHHHHh--CCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCC
Confidence 43456788888899987653 22 234444433 69999999999976433211 12344556677777766665556
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
..+++|+||||||.+++.++.++|++++++|++++..
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHHhCccccceEEEecccc
Confidence 6789999999999999999999999999999998753
No 9
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.77 E-value=2e-17 Score=128.11 Aligned_cols=151 Identities=22% Similarity=0.210 Sum_probs=111.3
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCC--CCCCCCcHHHHHHHHHHHHHHHHHh--CC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGG--KRKAPPKAEKLVEFHTDVVKGAVAK--FP 95 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g--~~~~~~~~~~~~~~~~~~i~~~~~~--~~ 95 (203)
.+++..|+++||++... +..+..++..++. .||.|+++|++|+|.+ .+..-.+....++|+.+.++..... +.
T Consensus 51 ~~pr~lv~~~HG~g~~~-s~~~~~~a~~l~~--~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~ 127 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHS-SWRYQSTAKRLAK--SGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENK 127 (313)
T ss_pred CCCceEEEEEcCCcccc-hhhHHHHHHHHHh--CCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccC
Confidence 36788899999999876 3333456666655 8999999999997633 3334456777778887777765443 45
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCC--------------------------cc-----------
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMN--------------------------GA----------- 138 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~--------------------------~~----------- 138 (203)
+.+.+|+||||||.+++.++.++|+..+|+|++++...-.+ ..
T Consensus 128 ~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~ 207 (313)
T KOG1455|consen 128 GLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPE 207 (313)
T ss_pred CCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHH
Confidence 56899999999999999999999999999999876332000 00
Q ss_pred ---------------ch--------------hhhhhccCCCEEEEEeCCCCCCChHHHHHHHHH
Q 028834 139 ---------------VR--------------DELLLQITVPIMFVQVPFLLSLSNIIEKEFYLL 173 (203)
Q Consensus 139 ---------------~~--------------~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l 173 (203)
.| ...+..++.|++++||+.|...++......|..
T Consensus 208 ~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~ 271 (313)
T KOG1455|consen 208 KRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEK 271 (313)
T ss_pred HHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHh
Confidence 00 123567789999999999997777777776654
No 10
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.77 E-value=2e-17 Score=131.69 Aligned_cols=101 Identities=14% Similarity=0.207 Sum_probs=80.1
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
+.++|||+||++++.. .|......+...+.|+++|+||+|.+.. +.. ....+++++.+..+++..+.+++++
T Consensus 26 ~g~~vvllHG~~~~~~-----~w~~~~~~L~~~~~via~D~~G~G~S~~--~~~-~~~~~~~a~dl~~ll~~l~~~~~~l 97 (295)
T PRK03592 26 EGDPIVFLHGNPTSSY-----LWRNIIPHLAGLGRCLAPDLIGMGASDK--PDI-DYTFADHARYLDAWFDALGLDDVVL 97 (295)
T ss_pred CCCEEEEECCCCCCHH-----HHHHHHHHHhhCCEEEEEcCCCCCCCCC--CCC-CCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 4578999999987652 4666666666566999999999754332 221 2456677777788888888889999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
+||||||.+++.++.++|++++++|++++
T Consensus 98 vGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 98 VGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred EEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 99999999999999999999999999885
No 11
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.77 E-value=1.4e-17 Score=135.83 Aligned_cols=108 Identities=22% Similarity=0.277 Sum_probs=76.6
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--CCCcHHHHHHHHHHHHHHHHHh--CCC
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK--APPKAEKLVEFHTDVVKGAVAK--FPG 96 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~--~~~~~~~~~~~~~~~i~~~~~~--~~~ 96 (203)
+.+++|||+||++.+.. .++..+...+.. .||.|+++|+||+|.+... ...+.....+++.+.++.+... ...
T Consensus 85 ~~~~~iv~lHG~~~~~~-~~~~~~~~~l~~--~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~ 161 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCT-FFFEGIARKIAS--SGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRG 161 (349)
T ss_pred CCCeEEEEECCCCCccc-hHHHHHHHHHHh--CCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCC
Confidence 46789999999987652 222334444443 6999999999997543321 1123445556666666555432 234
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
.+++|+||||||.+++.++.++|++++++|++++.
T Consensus 162 ~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred CCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 58999999999999999999999999999999853
No 12
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.77 E-value=1.1e-17 Score=128.32 Aligned_cols=102 Identities=18% Similarity=0.230 Sum_probs=80.1
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
++|++|++||++.+.. .|...+..+..+|.|+++|+||+|.+.. . ......+++.+.+.++++..+.+++++
T Consensus 12 ~~~~li~~hg~~~~~~-----~~~~~~~~l~~~~~v~~~d~~G~G~s~~--~-~~~~~~~~~~~~~~~~i~~~~~~~v~l 83 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-----MWDPVLPALTPDFRVLRYDKRGHGLSDA--P-EGPYSIEDLADDVLALLDHLGIERAVF 83 (251)
T ss_pred CCCeEEEEcCcccchh-----hHHHHHHHhhcccEEEEecCCCCCCCCC--C-CCCCCHHHHHHHHHHHHHHhCCCceEE
Confidence 5789999999987653 4666666666799999999999754322 1 122355666667777777777789999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+||||||.+++.++.++|++++++|+++++
T Consensus 84 iG~S~Gg~~a~~~a~~~p~~v~~li~~~~~ 113 (251)
T TIGR02427 84 CGLSLGGLIAQGLAARRPDRVRALVLSNTA 113 (251)
T ss_pred EEeCchHHHHHHHHHHCHHHhHHHhhccCc
Confidence 999999999999999999999999988754
No 13
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=6e-17 Score=131.06 Aligned_cols=108 Identities=16% Similarity=0.210 Sum_probs=78.4
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--CCCcHHHHHHHHHHHHHHHHHh--CCC
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK--APPKAEKLVEFHTDVVKGAVAK--FPG 96 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~--~~~~~~~~~~~~~~~i~~~~~~--~~~ 96 (203)
+.+++|||+||++.+....+ ..+...+.. .||.|+++|+||+|.+... .........+|+.+.++.+... ...
T Consensus 57 ~~~~~VvllHG~~~~~~~~~-~~~~~~L~~--~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~ 133 (330)
T PLN02298 57 PPRALIFMVHGYGNDISWTF-QSTAIFLAQ--MGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQG 133 (330)
T ss_pred CCceEEEEEcCCCCCcceeh-hHHHHHHHh--CCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCC
Confidence 45788999999986542222 233444433 7999999999997643321 1223455677777777777653 234
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
.+++|+||||||.+++.++.++|++++++|++++.
T Consensus 134 ~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 168 (330)
T PLN02298 134 LPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPM 168 (330)
T ss_pred CCEEEEEecchhHHHHHHHhcCcccceeEEEeccc
Confidence 58999999999999999999999999999998864
No 14
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.76 E-value=3.1e-17 Score=128.00 Aligned_cols=169 Identities=13% Similarity=0.078 Sum_probs=110.7
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
+++.|+|||+||++++.. .|...+..+...|.|+++|+||+|.+.. ... ...+++.+.+. + ...+++
T Consensus 10 G~g~~~ivllHG~~~~~~-----~w~~~~~~L~~~~~vi~~Dl~G~G~S~~--~~~--~~~~~~~~~l~---~-~~~~~~ 76 (256)
T PRK10349 10 GQGNVHLVLLHGWGLNAE-----VWRCIDEELSSHFTLHLVDLPGFGRSRG--FGA--LSLADMAEAVL---Q-QAPDKA 76 (256)
T ss_pred CCCCCeEEEECCCCCChh-----HHHHHHHHHhcCCEEEEecCCCCCCCCC--CCC--CCHHHHHHHHH---h-cCCCCe
Confidence 334457999999987753 5677777776789999999999754432 211 23333333333 2 345789
Q ss_pred EEEEeChhHHHHHHHHhhcCCccceEEEeccCCCC--------CC-----------------------------cc--c-
Q 028834 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKG--------MN-----------------------------GA--V- 139 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~--------~~-----------------------------~~--~- 139 (203)
+++||||||.+++.+|.++|++++++|+++++... .. .. .
T Consensus 77 ~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (256)
T PRK10349 77 IWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQ 156 (256)
T ss_pred EEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHH
Confidence 99999999999999999999999999998753110 00 00 0
Q ss_pred -------------------------------hhhhhhccCCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhcccCCC--
Q 028834 140 -------------------------------RDELLLQITVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLSDLW-- 186 (203)
Q Consensus 140 -------------------------------~~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~-- 186 (203)
....+..+++|+++++|+.|...+...........+..++..+++--
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~ 236 (256)
T PRK10349 157 DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHA 236 (256)
T ss_pred HHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCC
Confidence 00123456899999999999855443333222333344555555433
Q ss_pred --CCCchhhhhhhhhhc
Q 028834 187 --SPSPIWFNLLLIKIE 201 (203)
Q Consensus 187 --~~~~~~~~~~~~~~~ 201 (203)
-..|..|+..+.+|.
T Consensus 237 ~~~e~p~~f~~~l~~~~ 253 (256)
T PRK10349 237 PFISHPAEFCHLLVALK 253 (256)
T ss_pred ccccCHHHHHHHHHHHh
Confidence 378888888887764
No 15
>PLN02578 hydrolase
Probab=99.76 E-value=3.1e-17 Score=134.05 Aligned_cols=102 Identities=20% Similarity=0.225 Sum_probs=78.4
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
+.++||++||++.+. ..|...+..+.++|.|+++|+||+|.+.. + ...+..+.+.+.+..+++....+++++
T Consensus 85 ~g~~vvliHG~~~~~-----~~w~~~~~~l~~~~~v~~~D~~G~G~S~~--~-~~~~~~~~~a~~l~~~i~~~~~~~~~l 156 (354)
T PLN02578 85 EGLPIVLIHGFGASA-----FHWRYNIPELAKKYKVYALDLLGFGWSDK--A-LIEYDAMVWRDQVADFVKEVVKEPAVL 156 (354)
T ss_pred CCCeEEEECCCCCCH-----HHHHHHHHHHhcCCEEEEECCCCCCCCCC--c-ccccCHHHHHHHHHHHHHHhccCCeEE
Confidence 446799999998764 25667676676789999999999754332 2 122344555566666666666789999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+||||||.+++.+|.++|++++++|+++++
T Consensus 157 vG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 157 VGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred EEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 999999999999999999999999998753
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.76 E-value=2.2e-17 Score=128.34 Aligned_cols=102 Identities=10% Similarity=0.119 Sum_probs=79.3
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
..++|+|||+||++++.. .|......+.++|.|+++|+||+|.... .. ....+++.+.+..+++.++.+++
T Consensus 13 ~~~~~~iv~lhG~~~~~~-----~~~~~~~~l~~~~~vi~~D~~G~G~s~~--~~--~~~~~~~~~d~~~~l~~l~~~~~ 83 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLD-----NLGVLARDLVNDHDIIQVDMRNHGLSPR--DP--VMNYPAMAQDLLDTLDALQIEKA 83 (255)
T ss_pred CCCCCCEEEECCCCCchh-----HHHHHHHHHhhCCeEEEECCCCCCCCCC--CC--CCCHHHHHHHHHHHHHHcCCCce
Confidence 346788999999987753 4666666666789999999999754332 22 13445666666667777777889
Q ss_pred EEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
+|+||||||.+++.++.++|++|+++|+++.
T Consensus 84 ~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~ 114 (255)
T PRK10673 84 TFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114 (255)
T ss_pred EEEEECHHHHHHHHHHHhCHhhcceEEEEec
Confidence 9999999999999999999999999999864
No 17
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.75 E-value=4.8e-17 Score=124.44 Aligned_cols=96 Identities=15% Similarity=0.153 Sum_probs=70.7
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
++|+|||+||++++.. .|......+..+|.|+++|+||+|.+... . ....+++.+.+.. .. .+++++
T Consensus 3 g~~~iv~~HG~~~~~~-----~~~~~~~~l~~~~~vi~~d~~G~G~s~~~--~--~~~~~~~~~~~~~---~~-~~~~~l 69 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAE-----VFRCLDEELSAHFTLHLVDLPGHGRSRGF--G--PLSLADAAEAIAA---QA-PDPAIW 69 (245)
T ss_pred CCceEEEEcCCCCchh-----hHHHHHHhhccCeEEEEecCCcCccCCCC--C--CcCHHHHHHHHHH---hC-CCCeEE
Confidence 3478999999987653 46666667767899999999997543321 1 1223333333332 22 368999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
+||||||.+++.++.++|+++.++|++++
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~v~~~il~~~ 98 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDRVRALVTVAS 98 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHhhheeeEecC
Confidence 99999999999999999999999998865
No 18
>PRK10749 lysophospholipase L2; Provisional
Probab=99.75 E-value=1e-16 Score=129.85 Aligned_cols=106 Identities=13% Similarity=0.044 Sum_probs=76.8
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhc-CCCeEEEEEeccCCCCCCCCCC-------CcHHHHHHHHHHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRKAP-------PKAEKLVEFHTDVVKGAVA 92 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l-~~g~~v~~~d~~g~g~g~~~~~-------~~~~~~~~~~~~~i~~~~~ 92 (203)
.++++||++||++.+.. .|.+....+ ..||.|+++|+||+|.+..... .......+++.+.++.+..
T Consensus 52 ~~~~~vll~HG~~~~~~-----~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 126 (330)
T PRK10749 52 HHDRVVVICPGRIESYV-----KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQ 126 (330)
T ss_pred CCCcEEEEECCccchHH-----HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 45678999999976542 244433322 2799999999999764432111 1344555566666665555
Q ss_pred hCCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 93 KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 93 ~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
..+..+++++||||||.+++.++.++|+.++++|++++.
T Consensus 127 ~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 127 PGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred cCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 446679999999999999999999999999999998864
No 19
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.74 E-value=1.7e-16 Score=131.72 Aligned_cols=107 Identities=20% Similarity=0.221 Sum_probs=78.3
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC--CcHHHHHHHHHHHHHHHHHhCCCC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAKFPGH 97 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~ 97 (203)
..++|+|||+||++++.. .|...+..+..+|.|+++|++|+|.+..... .......+.+.+.+..+++..+.+
T Consensus 102 ~~~~p~vvllHG~~~~~~-----~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~ 176 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQG-----FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLS 176 (402)
T ss_pred CCCCCEEEEECCCCcchh-----HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCC
Confidence 345689999999987652 3444555555679999999999764432111 111223334555666666767778
Q ss_pred cEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+++|+||||||.+++.++.++|++++++|++++.
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 9999999999999999999999999999998754
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.74 E-value=2.3e-16 Score=123.62 Aligned_cols=106 Identities=14% Similarity=0.194 Sum_probs=76.7
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
.+++|||+||+.++.. .+...+...+.. .||.|+++|+||+|.+............+++.+.+..+++..+.+++++
T Consensus 24 ~~~~vl~~hG~~g~~~-~~~~~~~~~l~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 100 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSH-EYLENLRELLKE--EGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYL 100 (288)
T ss_pred CCCeEEEEcCCCCccH-HHHHHHHHHHHh--cCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEE
Confidence 3678999999876653 232233333333 5899999999997543321111101345667777777777777788999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
+||||||.+++.++..+|++++++|++++
T Consensus 101 iG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred EEeehHHHHHHHHHHhCccccceeeEecc
Confidence 99999999999999999999999998765
No 21
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.74 E-value=1.3e-16 Score=134.02 Aligned_cols=107 Identities=16% Similarity=0.234 Sum_probs=77.1
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHh-cCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHH-HHHHHhCCCCcEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGK-ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVV-KGAVAKFPGHPLI 100 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~-l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~i~ 100 (203)
+++|||+||++++. ..|...+.+.+.. ...+|.|+++|+||+|.+. .+....+..+++.+.+ ..+++..+.++++
T Consensus 201 k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~--~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~ 277 (481)
T PLN03087 201 KEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSP--KPADSLYTLREHLEMIERSVLERYKVKSFH 277 (481)
T ss_pred CCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCc--CCCCCcCCHHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999998775 3332112122321 2269999999999975433 2222223455555566 3677777888999
Q ss_pred EEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
++||||||.+++.++.++|++++++|+++++.
T Consensus 278 LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 278 IVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred EEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 99999999999999999999999999998653
No 22
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.73 E-value=2e-17 Score=130.33 Aligned_cols=109 Identities=15% Similarity=0.109 Sum_probs=90.3
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC-CCCcHHHHHHHHHHHHHHHHHhCCCC
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK-APPKAEKLVEFHTDVVKGAVAKFPGH 97 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (203)
+..+++++|++||+|++.+ .|-..+..|++...|+++|++|+|.+++. .+.+.....+.+.+.+++.+...+.+
T Consensus 86 ~~~~~~plVliHGyGAg~g-----~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~ 160 (365)
T KOG4409|consen 86 ESANKTPLVLIHGYGAGLG-----LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLE 160 (365)
T ss_pred cccCCCcEEEEeccchhHH-----HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCc
Confidence 3456788999999998764 57777777778999999999998755432 23334455568888999999999999
Q ss_pred cEEEEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
+.+|+|||+||.++..||.++|++|..||+++|..
T Consensus 161 KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~G 195 (365)
T KOG4409|consen 161 KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWG 195 (365)
T ss_pred ceeEeeccchHHHHHHHHHhChHhhceEEEecccc
Confidence 99999999999999999999999999999998744
No 23
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.72 E-value=3.1e-16 Score=119.97 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=79.2
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHH-HHHHHHhCCCCcEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDV-VKGAVAKFPGHPLIL 101 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~i~l 101 (203)
+|+||++||++++.. .|......+.+++.|+++|+||+|.... +........+++.+. +..+++..+.+++++
T Consensus 1 ~~~vv~~hG~~~~~~-----~~~~~~~~L~~~~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 74 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-----DWQALIELLGPHFRCLAIDLPGHGSSQS-PDEIERYDFEEAAQDILATLLDQLGIEPFFL 74 (251)
T ss_pred CCEEEEEcCCCCchh-----hHHHHHHHhcccCeEEEEcCCCCCCCCC-CCccChhhHHHHHHHHHHHHHHHcCCCeEEE
Confidence 378999999987763 4677777766799999999999753332 222123444555555 666777777789999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+|||+||.+++.++.++|+.+++++++++.
T Consensus 75 ~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 75 VGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred EEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 999999999999999999999999988754
No 24
>PLN02965 Probable pheophorbidase
Probab=99.71 E-value=9.3e-17 Score=125.41 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=78.3
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhc-CCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCC-CcEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG-HPLIL 101 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l-~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~i~l 101 (203)
..|||+||++.+.. .|...+..| ..+|+|+++|+||+|.+.. ........+++++.+..+++.++. ++++|
T Consensus 4 ~~vvllHG~~~~~~-----~w~~~~~~L~~~~~~via~Dl~G~G~S~~--~~~~~~~~~~~a~dl~~~l~~l~~~~~~~l 76 (255)
T PLN02965 4 IHFVFVHGASHGAW-----CWYKLATLLDAAGFKSTCVDLTGAGISLT--DSNTVSSSDQYNRPLFALLSDLPPDHKVIL 76 (255)
T ss_pred eEEEEECCCCCCcC-----cHHHHHHHHhhCCceEEEecCCcCCCCCC--CccccCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 35999999997753 466666666 4799999999999754332 111123466777777777777765 59999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+||||||.+++.++.++|++|+++|++++.
T Consensus 77 vGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred EecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 999999999999999999999999998864
No 25
>PRK06489 hypothetical protein; Provisional
Probab=99.71 E-value=3.9e-16 Score=127.83 Aligned_cols=107 Identities=14% Similarity=0.033 Sum_probs=73.2
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHH-----HhcCCCeEEEEEeccCCCCCCCCCCCc-----HHHHHHHHHHHHHH-HH
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDML-----GKALDAVEVVTFDYPYIAGGKRKAPPK-----AEKLVEFHTDVVKG-AV 91 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~-----~~l~~g~~v~~~d~~g~g~g~~~~~~~-----~~~~~~~~~~~i~~-~~ 91 (203)
.|+|||+||++++....+...+.+.+ ..+.++|.|+++|+||+|.+.. +... .....+++.+.+.. +.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~-p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSK-PSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCC-CCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 57899999998875321101222222 1114689999999999754332 1111 12345566555444 44
Q ss_pred HhCCCCcEE-EEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 92 AKFPGHPLI-LAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 92 ~~~~~~~i~-l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
+..+.++++ |+||||||++++.++.++|++++++|++++
T Consensus 148 ~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 148 EGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 667777875 899999999999999999999999999875
No 26
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.70 E-value=6.3e-16 Score=126.66 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=80.3
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
++.++|||+||++++.. .|......+..+|.|+++|+||+|...... ......++.+.+..+++..+..+++
T Consensus 129 ~~~~~vl~~HG~~~~~~-----~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN-----NWLFNHAALAAGRPVIALDLPGHGASSKAV---GAGSLDELAAAVLAFLDALGIERAH 200 (371)
T ss_pred CCCCeEEEECCCCCccc-----hHHHHHHHHhcCCEEEEEcCCCCCCCCCCC---CCCCHHHHHHHHHHHHHhcCCccEE
Confidence 34688999999988763 466666666667999999999975332111 1234556666777777777878999
Q ss_pred EEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
|+|||+||.+++.++..+|.+++++|+++++
T Consensus 201 lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 201 LVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred EEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 9999999999999999999999999999865
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.69 E-value=8.6e-16 Score=125.43 Aligned_cols=110 Identities=16% Similarity=0.069 Sum_probs=81.2
Q ss_pred CccEEEEEcCCCCCCCchH-HH-----HHHHHHH---hc-CCCeEEEEEeccCCCCCCCCCC----C-------cHHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDW-MI-----KWKDMLG---KA-LDAVEVVTFDYPYIAGGKRKAP----P-------KAEKLV 80 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~-~~-----~~~~~~~---~l-~~g~~v~~~d~~g~g~g~~~~~----~-------~~~~~~ 80 (203)
..++||++||++++..... .. -|..++. .+ ..+|.|+++|+||+++|++.+. . .....+
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 3578999999998653210 00 1455541 22 4789999999999534443221 0 113567
Q ss_pred HHHHHHHHHHHHhCCCCc-EEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 81 EFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~-i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+++.+.+..+++.++.++ ++|+||||||++++.++.++|++++++|++++.
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 888888888888888888 999999999999999999999999999999864
No 28
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.69 E-value=3.8e-16 Score=123.30 Aligned_cols=106 Identities=13% Similarity=0.143 Sum_probs=77.3
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC-
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP- 95 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~- 95 (203)
..++++|+|||+||++.+.. .|..+...|. .||.|+++|+||+|.... .......+++..+.+..+++...
T Consensus 13 ~~~~~~p~vvliHG~~~~~~-----~w~~~~~~L~~~g~~vi~~dl~g~G~s~~--~~~~~~~~~~~~~~l~~~i~~l~~ 85 (273)
T PLN02211 13 KPNRQPPHFVLIHGISGGSW-----CWYKIRCLMENSGYKVTCIDLKSAGIDQS--DADSVTTFDEYNKPLIDFLSSLPE 85 (273)
T ss_pred cccCCCCeEEEECCCCCCcC-----cHHHHHHHHHhCCCEEEEecccCCCCCCC--CcccCCCHHHHHHHHHHHHHhcCC
Confidence 34456789999999998764 3555554443 699999999999753221 11111344455555666666653
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
.++++|+||||||.++..++..+|++++++|++++
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~ 120 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAA 120 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhChhheeEEEEecc
Confidence 57999999999999999999999999999999965
No 29
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.68 E-value=1.2e-15 Score=121.68 Aligned_cols=110 Identities=19% Similarity=0.241 Sum_probs=81.6
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCC---CCCCCcHHHHHHHHHHHHHHHHHhCCC
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGK---RKAPPKAEKLVEFHTDVVKGAVAKFPG 96 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~---~~~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (203)
+++.+||++||++.+.. .|.++...+. .||.|+++|+||+|.+. ......+.....++...++........
T Consensus 32 ~~~g~Vvl~HG~~Eh~~-----ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~ 106 (298)
T COG2267 32 PPKGVVVLVHGLGEHSG-----RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPG 106 (298)
T ss_pred CCCcEEEEecCchHHHH-----HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCC
Confidence 34489999999998764 3444444443 89999999999976442 222333455555666555555544456
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCC
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGM 135 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~ 135 (203)
.+++|+||||||.+++.++.+++..++++|+.+|.+...
T Consensus 107 ~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 107 LPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred CCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 799999999999999999999999999999888877533
No 30
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.68 E-value=5.6e-15 Score=105.21 Aligned_cols=118 Identities=26% Similarity=0.350 Sum_probs=85.1
Q ss_pred EEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHH-hCCCCcEEEEE
Q 028834 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA-KFPGHPLILAG 103 (203)
Q Consensus 25 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~i~l~G 103 (203)
+||++||++++. ..+ ..+.+.+.+ +||.|+.+|+|+.+ .+ ....++.+.++.... ..+.++|+++|
T Consensus 1 ~vv~~HG~~~~~-~~~-~~~~~~l~~--~G~~v~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDY-QPLAEALAE--QGYAVVAFDYPGHG--DS-------DGADAVERVLADIRAGYPDPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTT-HHH-HHHHHHHHH--TTEEEEEESCTTST--TS-------HHSHHHHHHHHHHHHHHCTCCEEEEEE
T ss_pred CEEEECCCCCCH-HHH-HHHHHHHHH--CCCEEEEEecCCCC--cc-------chhHHHHHHHHHHHhhcCCCCcEEEEE
Confidence 589999999874 322 355555555 89999999999853 32 112234444444322 23678999999
Q ss_pred eChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCCCC
Q 028834 104 KSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLSLS 163 (203)
Q Consensus 104 hS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~ 163 (203)
||+||.++..++.++ .+++++|++++. + ..+.+...+.|+++++|++|+..+
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~~----~---~~~~~~~~~~pv~~i~g~~D~~~~ 119 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSPY----P---DSEDLAKIRIPVLFIHGENDPLVP 119 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESES----S---GCHHHTTTTSEEEEEEETT-SSSH
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecCc----c---chhhhhccCCcEEEEEECCCCcCC
Confidence 999999999999998 689999999983 1 133456788999999999999553
No 31
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.68 E-value=3.7e-16 Score=128.02 Aligned_cols=102 Identities=21% Similarity=0.360 Sum_probs=80.6
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
.|+|||+||++++.. .|...+..+..+|.|+++|+||+|.+. .+.......+++.+.+..+++..+.++++|+
T Consensus 88 gp~lvllHG~~~~~~-----~w~~~~~~L~~~~~via~Dl~G~G~S~--~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lv 160 (360)
T PLN02679 88 GPPVLLVHGFGASIP-----HWRRNIGVLAKNYTVYAIDLLGFGASD--KPPGFSYTMETWAELILDFLEEVVQKPTVLI 160 (360)
T ss_pred CCeEEEECCCCCCHH-----HHHHHHHHHhcCCEEEEECCCCCCCCC--CCCCccccHHHHHHHHHHHHHHhcCCCeEEE
Confidence 478999999987652 577777767678999999999975433 2222234566777777788887788899999
Q ss_pred EeChhHHHHHHHHhh-cCCccceEEEeccC
Q 028834 103 GKSMGSRVSCMVACK-EDIAASAVLCLGYP 131 (203)
Q Consensus 103 GhS~Gg~la~~~a~~-~p~~i~~lv~~~~~ 131 (203)
||||||.+++.++.. +|++|+++|+++++
T Consensus 161 GhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 161 GNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred EECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 999999999998874 79999999999854
No 32
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.68 E-value=6.4e-16 Score=119.33 Aligned_cols=99 Identities=18% Similarity=0.263 Sum_probs=78.4
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
+|+|||+||++++.. .|......+ .+|+|+++|+||+|.+.. +.. ...+++.+.+.++++..+.++++++
T Consensus 2 ~p~vvllHG~~~~~~-----~w~~~~~~l-~~~~vi~~D~~G~G~S~~--~~~--~~~~~~~~~l~~~l~~~~~~~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-----DWQPVGEAL-PDYPRLYIDLPGHGGSAA--ISV--DGFADVSRLLSQTLQSYNILPYWLV 71 (242)
T ss_pred CCEEEEECCCCCChH-----HHHHHHHHc-CCCCEEEecCCCCCCCCC--ccc--cCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 478999999988753 577777766 479999999999754332 221 2566777777788887788899999
Q ss_pred EeChhHHHHHHHHhhcCCc-cceEEEeccC
Q 028834 103 GKSMGSRVSCMVACKEDIA-ASAVLCLGYP 131 (203)
Q Consensus 103 GhS~Gg~la~~~a~~~p~~-i~~lv~~~~~ 131 (203)
||||||.+++.++.++|+. ++++++++++
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999999998665 9999988754
No 33
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.68 E-value=2.8e-16 Score=118.49 Aligned_cols=102 Identities=22% Similarity=0.304 Sum_probs=77.8
Q ss_pred EEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 028834 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (203)
Q Consensus 26 vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS 105 (203)
|||+||++++. . .|..++..+.++|.|+++|+||+|...... .......++..+.+.++++..+.++++++|||
T Consensus 1 vv~~hG~~~~~-~----~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S 74 (228)
T PF12697_consen 1 VVFLHGFGGSS-E----SWDPLAEALARGYRVIAFDLPGHGRSDPPP-DYSPYSIEDYAEDLAELLDALGIKKVILVGHS 74 (228)
T ss_dssp EEEE-STTTTG-G----GGHHHHHHHHTTSEEEEEECTTSTTSSSHS-SGSGGSHHHHHHHHHHHHHHTTTSSEEEEEET
T ss_pred eEEECCCCCCH-H----HHHHHHHHHhCCCEEEEEecCCcccccccc-ccCCcchhhhhhhhhhcccccccccccccccc
Confidence 79999999886 3 244444444479999999999965333211 11234556667777778888877899999999
Q ss_pred hhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 106 MGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 106 ~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+||.+++.++.++|++++++|+++++..
T Consensus 75 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 75 MGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred cccccccccccccccccccceeeccccc
Confidence 9999999999999999999999998774
No 34
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.68 E-value=4e-16 Score=123.97 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=81.6
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
..++|||+||++... ..|...+..+.++|+|+++|+||+|.+. .+.......+++++.+.++++..+.+++++
T Consensus 33 ~~~~iv~lHG~~~~~-----~~~~~~~~~l~~~~~vi~~D~~G~G~S~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 105 (286)
T PRK03204 33 TGPPILLCHGNPTWS-----FLYRDIIVALRDRFRCVAPDYLGFGLSE--RPSGFGYQIDEHARVIGEFVDHLGLDRYLS 105 (286)
T ss_pred CCCEEEEECCCCccH-----HHHHHHHHHHhCCcEEEEECCCCCCCCC--CCCccccCHHHHHHHHHHHHHHhCCCCEEE
Confidence 357899999987543 2466666666678999999999975332 222223556788888888888888889999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+||||||.++..++..+|++++++|+++++
T Consensus 106 vG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 106 MGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred EEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 999999999999999999999999987653
No 35
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.68 E-value=1.7e-15 Score=118.63 Aligned_cols=111 Identities=9% Similarity=-0.034 Sum_probs=80.4
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCC-CcHHHHHHHHHHHHHHHHHhCCCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
.++++||++||+++.... +...|......+. .||.|+.+|+||+|.+..... .......+|+.+.++.+.+ .+..+
T Consensus 23 ~~~~~VlllHG~g~~~~~-~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~-~~~~~ 100 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNK-SRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIE-QGHPP 100 (266)
T ss_pred CCceEEEEECCCcccccc-hhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHh-cCCCC
Confidence 346889999999875432 1223444444443 799999999999764432211 2344456777767666654 35679
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
++|+||||||.+++.++.++|+.++++|++++...
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999999987654
No 36
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.67 E-value=1.5e-15 Score=112.72 Aligned_cols=141 Identities=16% Similarity=0.087 Sum_probs=97.2
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC-CCCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK-APPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
..|+++||+.|+.. +. +.+.+.+++ +||.|.++.|||+|..... .......=.+++.+..+++.+. +-+.|.++
T Consensus 16 ~AVLllHGFTGt~~-Dv-r~Lgr~L~e--~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~ 90 (243)
T COG1647 16 RAVLLLHGFTGTPR-DV-RMLGRYLNE--NGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVV 90 (243)
T ss_pred EEEEEEeccCCCcH-HH-HHHHHHHHH--CCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 67999999998863 22 345555555 8999999999997543211 1222333444555555555433 55689999
Q ss_pred EeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccch------------------------------------------
Q 028834 103 GKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVR------------------------------------------ 140 (203)
Q Consensus 103 GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~------------------------------------------ 140 (203)
|.||||.+++.+|.++| ++++|.+++|+........
T Consensus 91 GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~ 168 (243)
T COG1647 91 GLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKK 168 (243)
T ss_pred eecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHH
Confidence 99999999999999997 9999999998863221100
Q ss_pred -----hhhhhccCCCEEEEEeCCCCCCChHHHHHHH
Q 028834 141 -----DELLLQITVPIMFVQVPFLLSLSNIIEKEFY 171 (203)
Q Consensus 141 -----~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~ 171 (203)
...+..+..|+++++|..|+..+.......|
T Consensus 169 ~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy 204 (243)
T COG1647 169 LIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIY 204 (243)
T ss_pred HHHHHHhhhhhcccchhheecccCCCCCHHHHHHHH
Confidence 0124567789999999999955555444444
No 37
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.66 E-value=2e-15 Score=121.69 Aligned_cols=105 Identities=22% Similarity=0.320 Sum_probs=85.5
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCC--CeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALD--AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~--g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
..+++||++||++++.. .|.+.+..+.+ |+.|+++|++|+|. .+..+....+...++.+.+..+......++
T Consensus 56 ~~~~pvlllHGF~~~~~-----~w~~~~~~L~~~~~~~v~aiDl~G~g~-~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~ 129 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSF-----SWRRVVPLLSKAKGLRVLAIDLPGHGY-SSPLPRGPLYTLRELVELIRRFVKEVFVEP 129 (326)
T ss_pred CCCCcEEEeccccCCcc-----cHhhhccccccccceEEEEEecCCCCc-CCCCCCCCceehhHHHHHHHHHHHhhcCcc
Confidence 46788999999999664 57888777764 49999999999653 332333444778888888888888888889
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEE---EeccC
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVL---CLGYP 131 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv---~~~~~ 131 (203)
++++|||+||.+|+.+|..+|+.+++++ +++++
T Consensus 130 ~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~ 165 (326)
T KOG1454|consen 130 VSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPP 165 (326)
T ss_pred eEEEEeCcHHHHHHHHHHhCcccccceeeecccccc
Confidence 9999999999999999999999999999 55443
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.66 E-value=8.1e-15 Score=121.16 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=76.3
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC--CCCcHHHHHHHHHHHHHHHHHhCCCC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK--APPKAEKLVEFHTDVVKGAVAKFPGH 97 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (203)
.+.+++||++||++++.. .+..+.+.+.. +||.|+++|++|+|.+... .........+++.+.++.+.......
T Consensus 133 ~~~~~~Vl~lHG~~~~~~--~~~~~a~~L~~--~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~ 208 (395)
T PLN02652 133 GEMRGILIIIHGLNEHSG--RYLHFAKQLTS--CGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGV 208 (395)
T ss_pred CCCceEEEEECCchHHHH--HHHHHHHHHHH--CCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCC
Confidence 345789999999987642 11234444433 7999999999997543321 11244556677777777776665556
Q ss_pred cEEEEEeChhHHHHHHHHhhcC---CccceEEEeccC
Q 028834 98 PLILAGKSMGSRVSCMVACKED---IAASAVLCLGYP 131 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p---~~i~~lv~~~~~ 131 (203)
+++++||||||.+++.++. +| +++.++|+.++.
T Consensus 209 ~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~ 244 (395)
T PLN02652 209 PCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPA 244 (395)
T ss_pred CEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcc
Confidence 8999999999999998775 44 479999998764
No 39
>PRK10566 esterase; Provisional
Probab=99.65 E-value=7.2e-15 Score=114.15 Aligned_cols=146 Identities=12% Similarity=0.080 Sum_probs=90.4
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCC-CCcH-------HHHHHHHHHHHHHHHHh
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-PPKA-------EKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~-~~~~-------~~~~~~~~~~i~~~~~~ 93 (203)
+.|+||++||++++.. .+ ..+.+.+.. .||.|+++|+||+|.+.... .... ....+++.+.+.++.+.
T Consensus 26 ~~p~vv~~HG~~~~~~-~~-~~~~~~l~~--~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (249)
T PRK10566 26 PLPTVFFYHGFTSSKL-VY-SYFAVALAQ--AGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREE 101 (249)
T ss_pred CCCEEEEeCCCCcccc-hH-HHHHHHHHh--CCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 4689999999987752 22 234455544 79999999999965321111 1111 13345666666666655
Q ss_pred --CCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC---------CCCc------------------cchhhhh
Q 028834 94 --FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK---------GMNG------------------AVRDELL 144 (203)
Q Consensus 94 --~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~---------~~~~------------------~~~~~~~ 144 (203)
.+.++|+++||||||.+++.++.++|....+++++++... .... ......+
T Consensus 102 ~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (249)
T PRK10566 102 GWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQL 181 (249)
T ss_pred CCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhh
Confidence 2567899999999999999999988764444444432210 0000 0000112
Q ss_pred hcc-CCCEEEEEeCCCCCCChHHHHHHH
Q 028834 145 LQI-TVPIMFVQVPFLLSLSNIIEKEFY 171 (203)
Q Consensus 145 ~~~-~~P~l~~~g~~d~~~~~~~~~~~~ 171 (203)
.++ +.|++++||+.|...+.......+
T Consensus 182 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~ 209 (249)
T PRK10566 182 EQLADRPLLLWHGLADDVVPAAESLRLQ 209 (249)
T ss_pred hhcCCCCEEEEEcCCCCcCCHHHHHHHH
Confidence 344 689999999999966655544433
No 40
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.65 E-value=2.2e-16 Score=115.50 Aligned_cols=191 Identities=15% Similarity=0.107 Sum_probs=132.1
Q ss_pred CCCcccccccccCC---CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC--CCeEEEEEeccCCCCCCCCCCCc--H
Q 028834 4 PSPPSKRRRKNECG---DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPK--A 76 (203)
Q Consensus 4 ~~~~~~~~~~~~~~---~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~--~g~~v~~~d~~g~g~g~~~~~~~--~ 76 (203)
.+..++.++++.++ ..+.....|++++|+-++...+ |...+..+. ..+.+++.|-||+ |.|.++.. .
T Consensus 20 ~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tD----f~pql~~l~k~l~~TivawDPpGY--G~SrPP~Rkf~ 93 (277)
T KOG2984|consen 20 DYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTD----FPPQLLSLFKPLQVTIVAWDPPGY--GTSRPPERKFE 93 (277)
T ss_pred hhhhheeeecCceeeeeecCCCCceeEeccccccccccc----CCHHHHhcCCCCceEEEEECCCCC--CCCCCCcccch
Confidence 45578889999988 4444455699999998887654 445554443 3599999999995 44444432 1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCC----------CCc---c-----
Q 028834 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKG----------MNG---A----- 138 (203)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~----------~~~---~----- 138 (203)
.+....-++....++++++-+++.+.|||-||..|+..|.++++.|..+|.+++...- ..+ +
T Consensus 94 ~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R 173 (277)
T KOG2984|consen 94 VQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGR 173 (277)
T ss_pred HHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhc
Confidence 2233333345556778888899999999999999999999999999999998864320 000 0
Q ss_pred ---------------------------------chhhhhhccCCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhccc--
Q 028834 139 ---------------------------------VRDELLLQITVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLS-- 183 (203)
Q Consensus 139 ---------------------------------~~~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~-- 183 (203)
.....+.++++|++++||..|+..+....-.--.+.+..++...+
T Consensus 174 ~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peG 253 (277)
T KOG2984|consen 174 QPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEG 253 (277)
T ss_pred chHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCC
Confidence 001235788999999999999955444333223344555555555
Q ss_pred --CCCCCCchhhhhhhhhh
Q 028834 184 --DLWSPSPIWFNLLLIKI 200 (203)
Q Consensus 184 --~~~~~~~~~~~~~~~~~ 200 (203)
++.-..+.|||.|+.+|
T Consensus 254 kHn~hLrya~eFnklv~dF 272 (277)
T KOG2984|consen 254 KHNFHLRYAKEFNKLVLDF 272 (277)
T ss_pred CcceeeechHHHHHHHHHH
Confidence 34458999999999876
No 41
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.65 E-value=9.6e-15 Score=111.17 Aligned_cols=148 Identities=14% Similarity=0.154 Sum_probs=94.9
Q ss_pred CCccEEEEEcCCCCCCCchHHH--HHHHHHHhcCCCeEEEEEeccCCCCCCCCC----C---CcHHHHHHHHHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGGKRKA----P---PKAEKLVEFHTDVVKGAV 91 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~--~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~----~---~~~~~~~~~~~~~i~~~~ 91 (203)
++.|+||++||.+++.. .+.. .|.....+ .|+.|+++|++|++...... . ........++.+.++++.
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~--~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADR--YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVK 87 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHh--CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHH
Confidence 46799999999887653 2221 24444444 79999999999864221100 0 011124456666777776
Q ss_pred HhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCcc-----------chh---hhh-------hccC
Q 028834 92 AKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGA-----------VRD---ELL-------LQIT 148 (203)
Q Consensus 92 ~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~-----------~~~---~~~-------~~~~ 148 (203)
+.+ +.++|+|+||||||.+++.++.++|+.+++++.++++....... ... ..+ ....
T Consensus 88 ~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (212)
T TIGR01840 88 ANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVCRLVRGMQSEYNGP 167 (212)
T ss_pred HhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHHHHHHhccCCcccCC
Confidence 665 44689999999999999999999999999999888765321100 000 000 1123
Q ss_pred CC-EEEEEeCCCCCCChHHHHHHH
Q 028834 149 VP-IMFVQVPFLLSLSNIIEKEFY 171 (203)
Q Consensus 149 ~P-~l~~~g~~d~~~~~~~~~~~~ 171 (203)
.| ++++||.+|..++.......+
T Consensus 168 ~p~~~i~hG~~D~vVp~~~~~~~~ 191 (212)
T TIGR01840 168 TPIMSVVHGDADYTVLPGNADEIR 191 (212)
T ss_pred CCeEEEEEcCCCceeCcchHHHHH
Confidence 44 679999999966655544433
No 42
>PRK13604 luxD acyl transferase; Provisional
Probab=99.64 E-value=1.9e-14 Score=113.84 Aligned_cols=145 Identities=11% Similarity=0.030 Sum_probs=99.3
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCC-CCCCCCC-CCcHHHHHHHHHHHHHHHHHhCCCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYI-AGGKRKA-PPKAEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~-g~g~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
.+.++||+.||++... .....+++.+.+ +||.|+.+|.+|+ |.+.... .........|+..+++++.+. +.++
T Consensus 35 ~~~~~vIi~HGf~~~~--~~~~~~A~~La~--~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~~~~ 109 (307)
T PRK13604 35 KKNNTILIASGFARRM--DHFAGLAEYLSS--NGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-GINN 109 (307)
T ss_pred CCCCEEEEeCCCCCCh--HHHHHHHHHHHH--CCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc-CCCc
Confidence 4568899999999865 223466666666 8999999998874 3222111 111223467888889988765 5568
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCC-------------------CCccc-------------h------
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKG-------------------MNGAV-------------R------ 140 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~-------------------~~~~~-------------~------ 140 (203)
|.|+||||||.+++..|... +++++|+.++...- .+... +
T Consensus 110 I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~ 187 (307)
T PRK13604 110 LGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHG 187 (307)
T ss_pred eEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcC
Confidence 99999999999997777743 48889988765430 00000 0
Q ss_pred -h------hhhhccCCCEEEEEeCCCCCCChHHHHHHHH
Q 028834 141 -D------ELLLQITVPIMFVQVPFLLSLSNIIEKEFYL 172 (203)
Q Consensus 141 -~------~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~ 172 (203)
. .....++.|++++||..|...+.......+.
T Consensus 188 ~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e 226 (307)
T PRK13604 188 WDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLD 226 (307)
T ss_pred ccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHH
Confidence 0 1234567999999999999777777666654
No 43
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.64 E-value=1.4e-14 Score=120.60 Aligned_cols=109 Identities=18% Similarity=0.257 Sum_probs=71.3
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh--CCCC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--FPGH 97 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~ 97 (203)
.++.|+||+.||.++.....| ..+.+.+.. .||.|+++|+||+|.+...... .........+++.+... .+.+
T Consensus 191 ~~~~P~Vli~gG~~~~~~~~~-~~~~~~La~--~Gy~vl~~D~pG~G~s~~~~~~--~d~~~~~~avld~l~~~~~vd~~ 265 (414)
T PRK05077 191 DGPFPTVLVCGGLDSLQTDYY-RLFRDYLAP--RGIAMLTIDMPSVGFSSKWKLT--QDSSLLHQAVLNALPNVPWVDHT 265 (414)
T ss_pred CCCccEEEEeCCcccchhhhH-HHHHHHHHh--CCCEEEEECCCCCCCCCCCCcc--ccHHHHHHHHHHHHHhCcccCcc
Confidence 345777777777665432222 234444444 7999999999997544321111 11111223344444433 2567
Q ss_pred cEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+|.++||||||.+++.++..+|++++++|+++++..
T Consensus 266 ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 266 RVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred cEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 999999999999999999999999999999987753
No 44
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.64 E-value=8.4e-15 Score=120.78 Aligned_cols=109 Identities=14% Similarity=0.055 Sum_probs=80.2
Q ss_pred ccEEEEEcCCCCCCCchHH--------HHHHHHHH---hc-CCCeEEEEEeccCCCCCCCCCCC-------c-----HHH
Q 028834 23 SPVVVFAHGAGAPSSSDWM--------IKWKDMLG---KA-LDAVEVVTFDYPYIAGGKRKAPP-------K-----AEK 78 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~--------~~~~~~~~---~l-~~g~~v~~~d~~g~g~g~~~~~~-------~-----~~~ 78 (203)
.|+|||+||++++...... ..|..++. .+ ..+|.|+++|++|.+.+++.+.. . ...
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6889999999987631000 01555542 22 47999999999984333322110 0 135
Q ss_pred HHHHHHHHHHHHHHhCCCCc-EEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 79 LVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~-i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
.++++.+.+..+++.++.++ ++++||||||.+++.++.++|++++++|++++.
T Consensus 128 ~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 128 TIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred CHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 67888888888988888888 599999999999999999999999999999854
No 45
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.63 E-value=2.6e-15 Score=123.51 Aligned_cols=106 Identities=13% Similarity=0.168 Sum_probs=85.0
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-KAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
.+++|||+||++.+.. .|+..+..+..+|+|+++|+||+|.+...... ......+++.+.+..+++.++.++++
T Consensus 126 ~~~~ivllHG~~~~~~-----~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~ 200 (383)
T PLN03084 126 NNPPVLLIHGFPSQAY-----SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVS 200 (383)
T ss_pred CCCeEEEECCCCCCHH-----HHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCce
Confidence 4688999999987652 57777777777899999999997543321111 12356778888888888888888999
Q ss_pred EEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
|+|||+||.+++.++.++|++++++|+++++.
T Consensus 201 LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 201 LVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred EEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 99999999999999999999999999999774
No 46
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.63 E-value=3.6e-15 Score=113.37 Aligned_cols=143 Identities=19% Similarity=0.241 Sum_probs=109.2
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcC--CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-CCCc
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHP 98 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~--~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 98 (203)
..+++++.||...+.+ +...++..++ .++.++.+||+|.| .+..........+|+.++.+++.+.+ +.++
T Consensus 59 ~~~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG--~S~G~psE~n~y~Di~avye~Lr~~~g~~~~ 131 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYG--RSSGKPSERNLYADIKAVYEWLRNRYGSPER 131 (258)
T ss_pred cceEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEeccccc--ccCCCcccccchhhHHHHHHHHHhhcCCCce
Confidence 4689999999866653 4555555554 49999999999964 43344444578899999999999998 4779
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCc-------------cchhhhhhccCCCEEEEEeCCCCCCChH
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNG-------------AVRDELLLQITVPIMFVQVPFLLSLSNI 165 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~-------------~~~~~~~~~~~~P~l~~~g~~d~~~~~~ 165 (203)
|+|+|+|+|...++.+|++.| ++|+|+.++-..++.. ....+....+++|++++||++|+..+..
T Consensus 132 Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~s 209 (258)
T KOG1552|consen 132 IILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFS 209 (258)
T ss_pred EEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCCEEEEecccCceeccc
Confidence 999999999999999999988 9999998875542211 1112335678899999999999977777
Q ss_pred HHHHHHHH
Q 028834 166 IEKEFYLL 173 (203)
Q Consensus 166 ~~~~~~~l 173 (203)
+..+-|..
T Consensus 210 Hg~~Lye~ 217 (258)
T KOG1552|consen 210 HGKALYER 217 (258)
T ss_pred ccHHHHHh
Confidence 77766644
No 47
>PRK11071 esterase YqiA; Provisional
Probab=99.63 E-value=2.4e-14 Score=107.19 Aligned_cols=132 Identities=15% Similarity=0.155 Sum_probs=90.8
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (203)
|+||++||++++..+.....+...+.....++.|+++|+||++ +++.+.+.++++..+.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCCCeEEEE
Confidence 5799999999887542222334444443358999999999841 24566777777777778999999
Q ss_pred eChhHHHHHHHHhhcCCccceEEEeccCCCC---------C--C-c----c-c--------hhhhhh--ccCCCEEEEEe
Q 028834 104 KSMGSRVSCMVACKEDIAASAVLCLGYPLKG---------M--N-G----A-V--------RDELLL--QITVPIMFVQV 156 (203)
Q Consensus 104 hS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~---------~--~-~----~-~--------~~~~~~--~~~~P~l~~~g 156 (203)
|||||.+++.++.++|. .+|+++++... . . . . . +..... ....|++++||
T Consensus 68 ~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~v~iihg 144 (190)
T PRK11071 68 SSLGGYYATWLSQCFML---PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPDLIWLLQQ 144 (190)
T ss_pred ECHHHHHHHHHHHHcCC---CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChhhEEEEEe
Confidence 99999999999999883 35778776541 0 0 0 0 0 000111 24556789999
Q ss_pred CCCCCCChHHHHHHHH
Q 028834 157 PFLLSLSNIIEKEFYL 172 (203)
Q Consensus 157 ~~d~~~~~~~~~~~~~ 172 (203)
+.|...+.......+.
T Consensus 145 ~~De~V~~~~a~~~~~ 160 (190)
T PRK11071 145 TGDEVLDYRQAVAYYA 160 (190)
T ss_pred CCCCcCCHHHHHHHHH
Confidence 9999887777776665
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.62 E-value=1.4e-14 Score=117.16 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=80.4
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-KAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
++|+||++||++++..+.+...+...+.. .||.|+++|+||+|........ ......+|+.+.++.+.+.++..+++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~ 134 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQK--RGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTA 134 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHH--CCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEE
Confidence 47899999999887655555455566655 8999999999997432211111 11124577888888887777778999
Q ss_pred EEEeChhHHHHHHHHhhcCC--ccceEEEeccCC
Q 028834 101 LAGKSMGSRVSCMVACKEDI--AASAVLCLGYPL 132 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~p~--~i~~lv~~~~~~ 132 (203)
++||||||.++..++.+++. .+.++|++++|+
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 99999999988888877654 389999999885
No 49
>PLN02511 hydrolase
Probab=99.61 E-value=1.7e-14 Score=119.23 Aligned_cols=110 Identities=19% Similarity=0.232 Sum_probs=81.5
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC-CcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
..+|+||++||++++..+.|...+...+.. .||+|+++|+||+|....... .......+|+.+.++++...+...++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~--~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~ 175 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARS--KGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANL 175 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHH--CCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCE
Confidence 457899999999877654443333333333 799999999999754322111 11124567888888888887777799
Q ss_pred EEEEeChhHHHHHHHHhhcCCc--cceEEEeccCC
Q 028834 100 ILAGKSMGSRVSCMVACKEDIA--ASAVLCLGYPL 132 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~--i~~lv~~~~~~ 132 (203)
+++||||||.+++.++.+++++ +.+++++++|.
T Consensus 176 ~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 176 YAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred EEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 9999999999999999998876 88999888765
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.60 E-value=1.7e-14 Score=136.61 Aligned_cols=104 Identities=19% Similarity=0.309 Sum_probs=80.7
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC-----CcHHHHHHHHHHHHHHHHHhCCC
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP-----PKAEKLVEFHTDVVKGAVAKFPG 96 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~ 96 (203)
++++|||+||++++.. .|...+..+..+|+|+++|+||+|....... .......+++++.+..+++.++.
T Consensus 1370 ~~~~vVllHG~~~s~~-----~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~ 1444 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-----DWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP 1444 (1655)
T ss_pred CCCeEEEECCCCCCHH-----HHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC
Confidence 3578999999998863 4666666666789999999999754322110 11223466777777777777777
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
++++|+||||||.+++.++.++|++++++|++++
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 8999999999999999999999999999999874
No 51
>PRK07581 hypothetical protein; Validated
Probab=99.59 E-value=1.4e-14 Score=117.66 Aligned_cols=104 Identities=8% Similarity=-0.033 Sum_probs=69.9
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHH---HhcC-CCeEEEEEeccCCCCCCCCCCC--c--H-----HHHHHHHHHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDML---GKAL-DAVEVVTFDYPYIAGGKRKAPP--K--A-----EKLVEFHTDVVK 88 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~---~~l~-~g~~v~~~d~~g~g~g~~~~~~--~--~-----~~~~~~~~~~i~ 88 (203)
+.|+||+.||++++.. .|...+ ..+. .+|+|+++|+||+|.+...... . . ....+++.+...
T Consensus 40 ~~~~vll~~~~~~~~~-----~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (339)
T PRK07581 40 KDNAILYPTWYSGTHQ-----DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHR 114 (339)
T ss_pred CCCEEEEeCCCCCCcc-----cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHH
Confidence 3466777777775542 122221 1333 6899999999997644321110 0 0 113345554445
Q ss_pred HHHHhCCCCc-EEEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 89 GAVAKFPGHP-LILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 89 ~~~~~~~~~~-i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
.+++.++.++ .+|+||||||++++.+|.++|++|+++|++++
T Consensus 115 ~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 115 LLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred HHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 5667788889 47999999999999999999999999999853
No 52
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.58 E-value=2e-14 Score=112.90 Aligned_cols=109 Identities=15% Similarity=0.193 Sum_probs=90.0
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCC
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH 97 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (203)
+.+..|+|+++||+..... .|+..+..++ .||+|+++|++|+|.++. +.....+....+...+..+++.++.+
T Consensus 40 g~~~gP~illlHGfPe~wy-----swr~q~~~la~~~~rviA~DlrGyG~Sd~-P~~~~~Yt~~~l~~di~~lld~Lg~~ 113 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWY-----SWRHQIPGLASRGYRVIAPDLRGYGFSDA-PPHISEYTIDELVGDIVALLDHLGLK 113 (322)
T ss_pred cCCCCCEEEEEccCCccch-----hhhhhhhhhhhcceEEEecCCCCCCCCCC-CCCcceeeHHHHHHHHHHHHHHhccc
Confidence 3456899999999986642 5777777776 679999999999754333 33335677788888888899999999
Q ss_pred cEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+++++||++|+.+|..++..+|+++.++|+++.+..
T Consensus 114 k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 114 KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 999999999999999999999999999999987654
No 53
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.58 E-value=9.6e-14 Score=105.97 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=83.5
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHH-hc-CCCeEEEEEeccCC----CCCC---CC------CCC------cH
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLG-KA-LDAVEVVTFDYPYI----AGGK---RK------APP------KA 76 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~-~l-~~g~~v~~~d~~g~----g~g~---~~------~~~------~~ 76 (203)
+..+.+++|||+||+|.+. . .+..... .. ..+..++.++-|.. ..|. .. ... ..
T Consensus 9 ~~~~~~~lvi~LHG~G~~~-~----~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i 83 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSE-D----LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGI 83 (216)
T ss_dssp -SST-SEEEEEE--TTS-H-H----HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHH
T ss_pred CCCCCceEEEEECCCCCCc-c----hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHH
Confidence 4566789999999998875 2 3344333 12 26788887765421 0111 10 011 12
Q ss_pred HHHHHHHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEE
Q 028834 77 EKLVEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQ 155 (203)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~ 155 (203)
....+.+.+.++...+.. +.++|+|+|+|+||.+++.++.++|..++++|++++.++........ .....++|.++.|
T Consensus 84 ~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~-~~~~~~~pi~~~h 162 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDR-PEALAKTPILIIH 162 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCC-HCCCCTS-EEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccccc-ccccCCCcEEEEe
Confidence 233444555555544433 55689999999999999999999999999999999877533221111 1112278999999
Q ss_pred eCCCCCCChHHHHHHH
Q 028834 156 VPFLLSLSNIIEKEFY 171 (203)
Q Consensus 156 g~~d~~~~~~~~~~~~ 171 (203)
|..|+.++.......+
T Consensus 163 G~~D~vvp~~~~~~~~ 178 (216)
T PF02230_consen 163 GDEDPVVPFEWAEKTA 178 (216)
T ss_dssp ETT-SSSTHHHHHHHH
T ss_pred cCCCCcccHHHHHHHH
Confidence 9999966655544443
No 54
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.55 E-value=7.7e-13 Score=104.60 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=105.3
Q ss_pred CCccEEEEEcCCCCCCCchHHH--HHHHHHHhcCCCeEEEEEeccCCCCCCCCC----------------C----CcHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGGKRKA----------------P----PKAEK 78 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~--~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~----------------~----~~~~~ 78 (203)
.+.|+|+++||.+++. ..|.. .+..+... .|+.|+++|.+++|.+.+.. . .....
T Consensus 40 ~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~--~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~ 116 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAE--HGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYR 116 (275)
T ss_pred CCCCEEEEccCCCCCc-cHHHhhhHHHHHHhh--cCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccch
Confidence 4579999999998775 33321 12233333 69999999985543332110 0 00112
Q ss_pred HHHHHHHHHHHHHHh---CCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCC-c--------------cc-
Q 028834 79 LVEFHTDVVKGAVAK---FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMN-G--------------AV- 139 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~---~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~-~--------------~~- 139 (203)
....+.+.+..+++. .+.++++++||||||.+++.++.++|+.+++++++++...... . ..
T Consensus 117 ~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 196 (275)
T TIGR02821 117 MYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEAAW 196 (275)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHHHHHhcccccch
Confidence 234444555555544 3557899999999999999999999999999998876542110 0 00
Q ss_pred h---hhhh---hccCCCEEEEEeCCCCCCCh-HHHHHHHH-HHHHH---hhhcccCCCCCCchhhhhhhhhhc
Q 028834 140 R---DELL---LQITVPIMFVQVPFLLSLSN-IIEKEFYL-LVMVL---KLSKLSDLWSPSPIWFNLLLIKIE 201 (203)
Q Consensus 140 ~---~~~~---~~~~~P~l~~~g~~d~~~~~-~~~~~~~~-l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 201 (203)
. ...+ .....|+++.+|+.|+..+. ........ +...- .....+...|-..+|...+-..+|
T Consensus 197 ~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~~~~~ 269 (275)
T TIGR02821 197 RSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIASFIADHLR 269 (275)
T ss_pred hhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHHHhHHHHHH
Confidence 0 0001 12356888889999985554 22222222 22221 222334566788888887776665
No 55
>PRK05855 short chain dehydrogenase; Validated
Probab=99.54 E-value=5.4e-14 Score=121.50 Aligned_cols=103 Identities=16% Similarity=0.188 Sum_probs=70.1
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCC-cE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH-PL 99 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~i 99 (203)
.+.|+|||+||++++.. .|...+..+..+|.|+++|+||+|.+.. .........+++.+.+..+++..+.. ++
T Consensus 23 ~~~~~ivllHG~~~~~~-----~w~~~~~~L~~~~~Vi~~D~~G~G~S~~-~~~~~~~~~~~~a~dl~~~i~~l~~~~~~ 96 (582)
T PRK05855 23 PDRPTVVLVHGYPDNHE-----VWDGVAPLLADRFRVVAYDVRGAGRSSA-PKRTAAYTLARLADDFAAVIDAVSPDRPV 96 (582)
T ss_pred CCCCeEEEEcCCCchHH-----HHHHHHHHhhcceEEEEecCCCCCCCCC-CCcccccCHHHHHHHHHHHHHHhCCCCcE
Confidence 34688999999987652 4666666666799999999999754332 12112234556666666666666544 59
Q ss_pred EEEEeChhHHHHHHHHhhc--CCccceEEEec
Q 028834 100 ILAGKSMGSRVSCMVACKE--DIAASAVLCLG 129 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~--p~~i~~lv~~~ 129 (203)
+|+||||||.+++.++... +..+..++.++
T Consensus 97 ~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 97 HLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred EEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 9999999999998887662 34444444443
No 56
>PRK11460 putative hydrolase; Provisional
Probab=99.54 E-value=4.5e-13 Score=103.37 Aligned_cols=145 Identities=12% Similarity=0.052 Sum_probs=87.8
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCC---CCCCCCC-----CC-c----HHHHHHHHHHH
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYI---AGGKRKA-----PP-K----AEKLVEFHTDV 86 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~---g~g~~~~-----~~-~----~~~~~~~~~~~ 86 (203)
.+++++||++||+|++.. .+ ..+.+.+......+.++.++-|.. +.+.... .. . .....+.+.+.
T Consensus 13 ~~~~~~vIlLHG~G~~~~-~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPV-AM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCcEEEEEeCCCCChH-HH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 456789999999998863 22 133333332112345555554321 0111100 00 0 11223344455
Q ss_pred HHHHHHhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCCCCh
Q 028834 87 VKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLSLSN 164 (203)
Q Consensus 87 i~~~~~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~~ 164 (203)
++++.+.. +.++|+++|||+||.+++.++..+|..+.+++++++.+...+. ....+.|++++||++|+.++.
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~~------~~~~~~pvli~hG~~D~vvp~ 164 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLPE------TAPTATTIHLIHGGEDPVIDV 164 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccccc------cccCCCcEEEEecCCCCccCH
Confidence 55555554 3468999999999999999999988888888888765432211 123578999999999996665
Q ss_pred HHHHHHHH
Q 028834 165 IIEKEFYL 172 (203)
Q Consensus 165 ~~~~~~~~ 172 (203)
......+.
T Consensus 165 ~~~~~~~~ 172 (232)
T PRK11460 165 AHAVAAQE 172 (232)
T ss_pred HHHHHHHH
Confidence 55544443
No 57
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.54 E-value=8.1e-14 Score=112.99 Aligned_cols=109 Identities=14% Similarity=0.135 Sum_probs=76.9
Q ss_pred CCccEEEEEcCCCCCCCchHH------------------------HHHHHHHHhcCCCeEEEEEeccCCCCCCCCC----
Q 028834 21 SSSPVVVFAHGAGAPSSSDWM------------------------IKWKDMLGKALDAVEVVTFDYPYIAGGKRKA---- 72 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~------------------------~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~---- 72 (203)
+++.+|+++||++++....++ ..|.+.+.+ .||.|+++|+||+|.+....
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~--~G~~V~~~D~rGHG~S~~~~~~~g 96 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK--NGYSVYGLDLQGHGESDGLQNLRG 96 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH--CCCcEEEecccccCCCcccccccc
Confidence 578899999999988753332 234555555 89999999999976433211
Q ss_pred -CCcHHHHHHHHHHHHHHHHH-------------------hCC-CCcEEEEEeChhHHHHHHHHhhcCC--------ccc
Q 028834 73 -PPKAEKLVEFHTDVVKGAVA-------------------KFP-GHPLILAGKSMGSRVSCMVACKEDI--------AAS 123 (203)
Q Consensus 73 -~~~~~~~~~~~~~~i~~~~~-------------------~~~-~~~i~l~GhS~Gg~la~~~a~~~p~--------~i~ 123 (203)
...+...++|+.+.++.+.+ ... ..+++|+||||||.+++.++...+. .++
T Consensus 97 ~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~ 176 (332)
T TIGR01607 97 HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIK 176 (332)
T ss_pred chhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccc
Confidence 12455566777777766544 122 4589999999999999999875432 588
Q ss_pred eEEEeccC
Q 028834 124 AVLCLGYP 131 (203)
Q Consensus 124 ~lv~~~~~ 131 (203)
|+|+++++
T Consensus 177 g~i~~s~~ 184 (332)
T TIGR01607 177 GCISLSGM 184 (332)
T ss_pred eEEEeccc
Confidence 99977754
No 58
>PLN02442 S-formylglutathione hydrolase
Probab=99.53 E-value=4.9e-13 Score=106.11 Aligned_cols=141 Identities=11% Similarity=0.053 Sum_probs=91.2
Q ss_pred CCccEEEEEcCCCCCCCchHHH--HHHHHHHhcCCCeEEEEEeccCCCCC---CC----------CC---C-C-----c-
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGG---KR----------KA---P-P-----K- 75 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~--~~~~~~~~l~~g~~v~~~d~~g~g~g---~~----------~~---~-~-----~- 75 (203)
.+.|+|+++||++++. ..|.. .....+.. .|+.|+.+|.+++|.+ .. .. . . .
T Consensus 45 ~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~--~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (283)
T PLN02442 45 GKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAA--RGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRM 121 (283)
T ss_pred CCCCEEEEecCCCcCh-HHHHHhhhHHHHHhh--cCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccch
Confidence 4679999999988765 22321 12233332 7999999998764311 10 00 0 0 1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCC--c---------------c
Q 028834 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMN--G---------------A 138 (203)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~--~---------------~ 138 (203)
.....+++.+.+....+..+.++++|+||||||.+++.++.++|+.+++++++++...... . .
T Consensus 122 ~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 201 (283)
T PLN02442 122 YDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNYLGSDKADW 201 (283)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHHHHHcCCChhhH
Confidence 1224455666666665556778999999999999999999999999999999887653110 0 0
Q ss_pred c------hhhhhhccCCCEEEEEeCCCCCCCh
Q 028834 139 V------RDELLLQITVPIMFVQVPFLLSLSN 164 (203)
Q Consensus 139 ~------~~~~~~~~~~P~l~~~g~~d~~~~~ 164 (203)
. ........+.|+++++|+.|+..+.
T Consensus 202 ~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~ 233 (283)
T PLN02442 202 EEYDATELVSKFNDVSATILIDQGEADKFLKE 233 (283)
T ss_pred HHcChhhhhhhccccCCCEEEEECCCCccccc
Confidence 0 0011223678999999999975443
No 59
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.53 E-value=8e-14 Score=111.76 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=74.4
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-KAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
.++|||+||+.++... + .+...+.. .+|.|+++|+||+|.+. ... ......+++.+.+..+++.++.+++++
T Consensus 27 ~~~lvllHG~~~~~~~-~--~~~~~~~~--~~~~vi~~D~~G~G~S~--~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~l 99 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD-P--GCRRFFDP--ETYRIVLFDQRGCGKST--PHACLEENTTWDLVADIEKLREKLGIKNWLV 99 (306)
T ss_pred CCEEEEECCCCCCCCC-H--HHHhccCc--cCCEEEEECCCCCCCCC--CCCCcccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5679999997765422 1 22222322 68999999999975333 221 122345567777777888778789999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
+||||||.+++.++.++|++++++|++++
T Consensus 100 vG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 100 FGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred EEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 99999999999999999999999999875
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.52 E-value=1.2e-13 Score=105.89 Aligned_cols=104 Identities=15% Similarity=0.251 Sum_probs=76.0
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC--CCeEEEEEeccCCCCCCCCCC--CcHHHHHHHHHHHHHHHHHhCC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAKFP 95 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~--~g~~v~~~d~~g~g~g~~~~~--~~~~~~~~~~~~~i~~~~~~~~ 95 (203)
....|++++.||+|.++- .|+.+..++. ...+++++|+||+|....... -+.++..+|+.+.+.++....
T Consensus 71 ~t~gpil~l~HG~G~S~L-----SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~- 144 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSAL-----SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGEL- 144 (343)
T ss_pred CCCccEEEEeecCcccch-----hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccC-
Confidence 446789999999998874 4666655553 577889999999764433222 234567777777777775443
Q ss_pred CCcEEEEEeChhHHHHHHHHhh--cCCccceEEEecc
Q 028834 96 GHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGY 130 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~--~p~~i~~lv~~~~ 130 (203)
..+|+|+||||||.+|.+.|.. -|. +.|++.++-
T Consensus 145 ~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 145 PPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred CCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 3479999999999999998876 355 899988863
No 61
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.50 E-value=1.6e-12 Score=107.82 Aligned_cols=111 Identities=16% Similarity=0.184 Sum_probs=75.6
Q ss_pred CCccEEEEEcCCCCCCC-chHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCC---cHHHHHHHHHHHHHHHHHhC--
Q 028834 21 SSSPVVVFAHGAGAPSS-SDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP---KAEKLVEFHTDVVKGAVAKF-- 94 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~---~~~~~~~~~~~~i~~~~~~~-- 94 (203)
..+|++|++||++.+.. ..|...+.+.+.....++.|+++|++|++. +..+. ......+++++.++.+.+..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~--s~y~~a~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQ--QHYPTSAAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCC--CCCccccccHHHHHHHHHHHHHHHHHhhCC
Confidence 45789999999986532 233323333322112479999999999643 22221 12233345566666555433
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+.++++|+||||||++|..++...|.+|.+++++++..+
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 467999999999999999999999999999999998654
No 62
>PLN00021 chlorophyllase
Probab=99.50 E-value=7.9e-13 Score=106.08 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=83.0
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh-----
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK----- 93 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~----- 93 (203)
..++.|+|||+||++.... .| ....+.++. +||.|+++|+++++ +.. . ....++..+.+.++.+.
T Consensus 48 ~~g~~PvVv~lHG~~~~~~-~y-~~l~~~Las--~G~~VvapD~~g~~-~~~-~----~~~i~d~~~~~~~l~~~l~~~l 117 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLYNS-FY-SQLLQHIAS--HGFIVVAPQLYTLA-GPD-G----TDEIKDAAAVINWLSSGLAAVL 117 (313)
T ss_pred CCCCCCEEEEECCCCCCcc-cH-HHHHHHHHh--CCCEEEEecCCCcC-CCC-c----hhhHHHHHHHHHHHHhhhhhhc
Confidence 3455799999999988753 22 233333433 79999999999852 221 1 12223333333433321
Q ss_pred -----CCCCcEEEEEeChhHHHHHHHHhhcCC-----ccceEEEeccCCCCC-----Cccch--hhhhhccCCCEEEEEe
Q 028834 94 -----FPGHPLILAGKSMGSRVSCMVACKEDI-----AASAVLCLGYPLKGM-----NGAVR--DELLLQITVPIMFVQV 156 (203)
Q Consensus 94 -----~~~~~i~l~GhS~Gg~la~~~a~~~p~-----~i~~lv~~~~~~~~~-----~~~~~--~~~~~~~~~P~l~~~g 156 (203)
.+.++++|+||||||.+++.++.++++ +++++|++++..... ..... ......+..|.+++.+
T Consensus 118 ~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il~~~~~s~~~~~P~liig~ 197 (313)
T PLN00021 118 PEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVLTYAPHSFNLDIPVLVIGT 197 (313)
T ss_pred ccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcccccCcccccCCCCeEEEec
Confidence 234689999999999999999998763 689999888754211 00000 0112346799999988
Q ss_pred CCCC
Q 028834 157 PFLL 160 (203)
Q Consensus 157 ~~d~ 160 (203)
..|.
T Consensus 198 g~~~ 201 (313)
T PLN00021 198 GLGG 201 (313)
T ss_pred CCCc
Confidence 8663
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.49 E-value=1e-12 Score=103.79 Aligned_cols=111 Identities=14% Similarity=0.159 Sum_probs=77.1
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCC---cHHHHHHHHHHHHHHHHHh--C
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP---KAEKLVEFHTDVVKGAVAK--F 94 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~---~~~~~~~~~~~~i~~~~~~--~ 94 (203)
...+|++|++||++++....|...+++.+.. ..++.|+++|+++. +...... ......+++.+.++.+.+. .
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~-~~~~nVi~vD~~~~--~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~ 109 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLS-RGDYNVIVVDWGRG--ANPNYPQAVNNTRVVGAELAKFLDFLVDNTGL 109 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHh-cCCCEEEEEECccc--cccChHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 3457899999999887644443334432211 15899999999974 2211111 1122334566666666665 3
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+.++++++||||||+++..++...|.++++++.+++..+
T Consensus 110 ~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 110 SLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred ChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 456899999999999999999999999999999987665
No 64
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.48 E-value=1.9e-13 Score=111.32 Aligned_cols=83 Identities=12% Similarity=0.150 Sum_probs=63.6
Q ss_pred HHHHHH---hc-CCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCc-EEEEEeChhHHHHHHHHhhc
Q 028834 44 WKDMLG---KA-LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 44 ~~~~~~---~l-~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-i~l~GhS~Gg~la~~~a~~~ 118 (203)
|...+. .+ ..+|+|+++|+||+| .+.. .. ...+++++.+..+++.++.++ ++|+||||||+++++++.++
T Consensus 85 w~~~v~~~~~L~~~~~~Vi~~Dl~G~g--~s~~-~~--~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~ 159 (343)
T PRK08775 85 WEGLVGSGRALDPARFRLLAFDFIGAD--GSLD-VP--IDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRH 159 (343)
T ss_pred chhccCCCCccCccccEEEEEeCCCCC--CCCC-CC--CCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHC
Confidence 566664 35 368999999999964 3211 11 234566777778888887766 57999999999999999999
Q ss_pred CCccceEEEeccC
Q 028834 119 DIAASAVLCLGYP 131 (203)
Q Consensus 119 p~~i~~lv~~~~~ 131 (203)
|++++++|++++.
T Consensus 160 P~~V~~LvLi~s~ 172 (343)
T PRK08775 160 PARVRTLVVVSGA 172 (343)
T ss_pred hHhhheEEEECcc
Confidence 9999999999854
No 65
>COG0400 Predicted esterase [General function prediction only]
Probab=99.48 E-value=2.5e-12 Score=96.84 Aligned_cols=143 Identities=12% Similarity=0.091 Sum_probs=96.2
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCC----------CCCCCcHHHHHHHHHHHH
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGK----------RKAPPKAEKLVEFHTDVV 87 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~----------~~~~~~~~~~~~~~~~~i 87 (203)
.+.+..|+||++||.|++.. .+......+..++.++.+.-+-.-.+. +....+.....+.+.+.+
T Consensus 13 ~~~p~~~~iilLHG~Ggde~-----~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 13 PGDPAAPLLILLHGLGGDEL-----DLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCCCcEEEEEecCCCChh-----hhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 34556789999999998763 344555444467777777433211110 001122333445556666
Q ss_pred HHHHHhCCC--CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCCCChH
Q 028834 88 KGAVAKFPG--HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLSLSNI 165 (203)
Q Consensus 88 ~~~~~~~~~--~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~~~ 165 (203)
..+.++++. ++++++|+|.||.+++.+..++|..++++|++++..+...... .....+|+++.||.+|+..+..
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~----~~~~~~pill~hG~~Dpvvp~~ 163 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELL----PDLAGTPILLSHGTEDPVVPLA 163 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccc----cccCCCeEEEeccCcCCccCHH
Confidence 666666644 7999999999999999999999999999999998765333211 1246789999999999965555
Q ss_pred HHHH
Q 028834 166 IEKE 169 (203)
Q Consensus 166 ~~~~ 169 (203)
....
T Consensus 164 ~~~~ 167 (207)
T COG0400 164 LAEA 167 (207)
T ss_pred HHHH
Confidence 4443
No 66
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.47 E-value=2e-12 Score=102.15 Aligned_cols=109 Identities=10% Similarity=0.067 Sum_probs=74.2
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-CCCcE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHPL 99 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~i 99 (203)
+++.||++||+.......+ ..+..+.+.+. +||.|+++|++|+|.+.. .........+++.+.++.+.+.. +.++|
T Consensus 25 ~~~~vv~i~gg~~~~~g~~-~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~-~~~~~~~~~~d~~~~~~~l~~~~~g~~~i 102 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSH-RQFVLLARRLAEAGFPVLRFDYRGMGDSEG-ENLGFEGIDADIAAAIDAFREAAPHLRRI 102 (274)
T ss_pred CCCeEEEEeCCccccCCch-hHHHHHHHHHHHCCCEEEEeCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 4456777777543321111 12333333332 799999999999754332 22344456678888888887665 44679
Q ss_pred EEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+++||||||.+++.++.. +.+++++|++++++.
T Consensus 103 ~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred EEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 999999999999999875 468999999997754
No 67
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.39 E-value=1.8e-11 Score=93.46 Aligned_cols=136 Identities=14% Similarity=0.046 Sum_probs=84.5
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCC--CCCCCCc-----------HHHHHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGG--KRKAPPK-----------AEKLVEFHTDVV 87 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g--~~~~~~~-----------~~~~~~~~~~~i 87 (203)
+++|.||++|+..|-. .+...+++.+++ .||.|+++|+.+. .+ ....... .....+++.+.+
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~--~Gy~v~~pD~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 86 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAE--EGYVVLAPDLFGG-RGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAV 86 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHH--TT-EEEEE-CCCC-TS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHh--cCCCEEecccccC-CCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4789999999987764 445567777776 8999999998763 22 1111111 112233444555
Q ss_pred HHHHHhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCCCChH
Q 028834 88 KGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLSLSNI 165 (203)
Q Consensus 88 ~~~~~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~~~ 165 (203)
+.+.+.. +.++|.++|+|+||.+++.++.+. ..++++|.+-+.. ...........++.|+++.+|+.|+..+..
T Consensus 87 ~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~---~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~ 162 (218)
T PF01738_consen 87 DYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS---PPPPPLEDAPKIKAPVLILFGENDPFFPPE 162 (218)
T ss_dssp HHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS---SGGGHHHHGGG--S-EEEEEETT-TTS-HH
T ss_pred HHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC---CCCcchhhhcccCCCEeecCccCCCCCChH
Confidence 6665543 346899999999999999999987 5799999877621 112223345678999999999999855444
No 68
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.39 E-value=1.7e-12 Score=105.94 Aligned_cols=107 Identities=10% Similarity=0.001 Sum_probs=77.6
Q ss_pred ccEEEEEcCCCCCCCchH---HHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHH-HHHHHHHHHHHHhCCCCc
Q 028834 23 SPVVVFAHGAGAPSSSDW---MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLV-EFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~---~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 98 (203)
+++|+++||...+..... ...+.+.+.. +||.|+++|++|.+ .+.......... +++.+.++++.+..+.++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~--~G~~V~~~D~~g~g--~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLE--RGQDVYLIDWGYPD--RADRYLTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHH--CCCeEEEEeCCCCC--HHHhcCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 456999999753321100 0235555544 89999999998853 322222333333 457777888888878889
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
++++||||||.+++.++..+|++++++|++++|..
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 99999999999999999999999999999998764
No 69
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.38 E-value=2.2e-12 Score=95.73 Aligned_cols=152 Identities=17% Similarity=0.187 Sum_probs=106.9
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC--C
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--P 95 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~--~ 95 (203)
.....+|+++++||..++++ +++....-+... .+..|+.++|||.| .+....+..-..-|...+++++...- +
T Consensus 73 ~~E~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~--l~mnv~ivsYRGYG--~S~GspsE~GL~lDs~avldyl~t~~~~d 147 (300)
T KOG4391|consen 73 LSESSRPTLLYFHANAGNMG-HRLPIARVFYVN--LKMNVLIVSYRGYG--KSEGSPSEEGLKLDSEAVLDYLMTRPDLD 147 (300)
T ss_pred cccCCCceEEEEccCCCccc-chhhHHHHHHHH--cCceEEEEEeeccc--cCCCCccccceeccHHHHHHHHhcCccCC
Confidence 34457899999999999884 333222222233 58999999999954 44444444445556777888887663 6
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC----------CCC-----------ccchhhhhhccCCCEEEE
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK----------GMN-----------GAVRDELLLQITVPIMFV 154 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~----------~~~-----------~~~~~~~~~~~~~P~l~~ 154 (203)
+.+|+++|.|.||..|..+|++..+++.++|+-..-.. ... .+.....+...+.|.+++
T Consensus 148 ktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFi 227 (300)
T KOG4391|consen 148 KTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFI 227 (300)
T ss_pred cceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHHHHHHHHhhhcchhhhccccCceEEe
Confidence 67899999999999999999999999999985432110 000 111122344667899999
Q ss_pred EeCCCCCCChHHHHHHHHHH
Q 028834 155 QVPFLLSLSNIIEKEFYLLV 174 (203)
Q Consensus 155 ~g~~d~~~~~~~~~~~~~l~ 174 (203)
.|..|...++..-+.-|.+-
T Consensus 228 SGlkDelVPP~~Mr~Ly~~c 247 (300)
T KOG4391|consen 228 SGLKDELVPPVMMRQLYELC 247 (300)
T ss_pred ecCccccCCcHHHHHHHHhC
Confidence 99999988888777777663
No 70
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.35 E-value=4.3e-11 Score=87.32 Aligned_cols=133 Identities=15% Similarity=0.161 Sum_probs=100.1
Q ss_pred CCCccEEEEEcC---CCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCC
Q 028834 20 TSSSPVVVFAHG---AGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG 96 (203)
Q Consensus 20 ~~~~~~vv~~HG---~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (203)
.+++|+.|++|. +|+++.....+...+.+.+ .|+.++.+|++|.|.+.. ..+...-+.+|..+.++++..+...
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~--~G~atlRfNfRgVG~S~G-~fD~GiGE~~Da~aaldW~~~~hp~ 101 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVK--RGFATLRFNFRGVGRSQG-EFDNGIGELEDAAAALDWLQARHPD 101 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHh--CCceEEeecccccccccC-cccCCcchHHHHHHHHHHHHhhCCC
Confidence 467899999998 7788776666666666666 899999999999643332 2233445788999999999988766
Q ss_pred CcE-EEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCC
Q 028834 97 HPL-ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 97 ~~i-~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~ 160 (203)
.+. ++.|+|+|+.++..++.+.|+ +...+.+.++.. ..+ ...+.-...|.++++|++|.
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~-~~d---fs~l~P~P~~~lvi~g~~Dd 161 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN-AYD---FSFLAPCPSPGLVIQGDADD 161 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC-chh---hhhccCCCCCceeEecChhh
Confidence 654 899999999999999998864 777777777764 111 12233456789999999996
No 71
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.32 E-value=6.1e-11 Score=96.43 Aligned_cols=109 Identities=20% Similarity=0.293 Sum_probs=84.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCc---HHHHHHHHHHHHHHHHHhCCCC
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPK---AEKLVEFHTDVVKGAVAKFPGH 97 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~ 97 (203)
...|+||++||..+++.+.++.++...+.. .||++++++.||.+ |.. ...+ ....-+|+.+.++++.+.+...
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~--~G~r~VVfN~RG~~-g~~-LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a 198 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQR--KGYRVVVFNHRGLG-GSK-LTTPRLFTAGWTEDLREVVNHIKKRYPQA 198 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHh--CCcEEEEECCCCCC-CCc-cCCCceeecCCHHHHHHHHHHHHHhCCCC
Confidence 467999999998888877776677766655 89999999999952 322 2211 1235578999999999999888
Q ss_pred cEEEEEeChhHHHHHHHHhhcC--CccceEEEeccCCC
Q 028834 98 PLILAGKSMGSRVSCMVACKED--IAASAVLCLGYPLK 133 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p--~~i~~lv~~~~~~~ 133 (203)
++..+|+||||.+...|..+.. .++.+.++++.|+.
T Consensus 199 ~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 199 PLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred ceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 9999999999999999988732 35777777777664
No 72
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.32 E-value=2e-11 Score=106.57 Aligned_cols=146 Identities=14% Similarity=0.079 Sum_probs=94.5
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCC-CCCCC----CCCcHHHHHHHHHHHHHHHHHhC--C
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIA-GGKRK----APPKAEKLVEFHTDVVKGAVAKF--P 95 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g-~g~~~----~~~~~~~~~~~~~~~i~~~~~~~--~ 95 (203)
-|+||++||.......+........+.. .||.|+.+|+||.. .|... .........+|+.+.++.+.+.- +
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q~~~~--~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 471 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQVLAS--AGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVD 471 (620)
T ss_pred CCEEEEeCCCCccccccccchhhHHHhc--CCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcC
Confidence 4899999998765544222223333333 89999999999852 22211 11122357788888888554442 4
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC---------------------CCC-------ccchhhhhhcc
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK---------------------GMN-------GAVRDELLLQI 147 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~---------------------~~~-------~~~~~~~~~~~ 147 (203)
.+++.|+|||.||.+++..+.+.| .+++.+...+... +.. ..+......++
T Consensus 472 ~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i 550 (620)
T COG1506 472 PERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNI 550 (620)
T ss_pred hHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhhhccc
Confidence 468999999999999999999988 6777765554322 000 01112234578
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHH
Q 028834 148 TVPIMFVQVPFLLSLSNIIEKEFY 171 (203)
Q Consensus 148 ~~P~l~~~g~~d~~~~~~~~~~~~ 171 (203)
++|+|++||+.|...+.......+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~ 574 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLV 574 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHH
Confidence 899999999999866555444433
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.31 E-value=6.7e-11 Score=89.91 Aligned_cols=119 Identities=12% Similarity=0.055 Sum_probs=83.8
Q ss_pred CCeEEEEEeccCCCC-CC----CCCCCcHHHHHHHHHHHHHHHHHhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceE
Q 028834 53 DAVEVVTFDYPYIAG-GK----RKAPPKAEKLVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAV 125 (203)
Q Consensus 53 ~g~~v~~~d~~g~g~-g~----~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~l 125 (203)
+||.|+.+|+||.+. |. ...........+|+.+.+++++++. +.++|.++|||+||.++..++.++|++++++
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~ 92 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAA 92 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEE
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeee
Confidence 899999999998531 11 0111223467889999999998875 5679999999999999999999999999999
Q ss_pred EEeccCCCCCCc------c---------------------chhhhhhc--cCCCEEEEEeCCCCCCChHHHHHHH
Q 028834 126 LCLGYPLKGMNG------A---------------------VRDELLLQ--ITVPIMFVQVPFLLSLSNIIEKEFY 171 (203)
Q Consensus 126 v~~~~~~~~~~~------~---------------------~~~~~~~~--~~~P~l~~~g~~d~~~~~~~~~~~~ 171 (203)
++.++....... . .....+.. .+.|+|++||+.|...+.......+
T Consensus 93 v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~ 167 (213)
T PF00326_consen 93 VAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLY 167 (213)
T ss_dssp EEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHH
T ss_pred eccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHH
Confidence 988875541110 0 00112334 7899999999999977666555544
No 74
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.31 E-value=5.5e-11 Score=87.36 Aligned_cols=124 Identities=14% Similarity=0.123 Sum_probs=79.1
Q ss_pred EEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 028834 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (203)
Q Consensus 26 vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS 105 (203)
|+++||++++...+|..-|.+.+.. .+.|..+++. ....+.+.+.++..+... .++++|||||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~---~~~V~~~~~~-------------~P~~~~W~~~l~~~i~~~-~~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLEN---SVRVEQPDWD-------------NPDLDEWVQALDQAIDAI-DEPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTT---SEEEEEC--T-------------S--HHHHHHHHHHCCHC--TTTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCC---CeEEeccccC-------------CCCHHHHHHHHHHHHhhc-CCCeEEEEeC
Confidence 6899999999887776555555544 3666655542 135567777777766654 3479999999
Q ss_pred hhHHHHHHHH-hhcCCccceEEEeccCCCC----CCcc---chhhhhhccCCCEEEEEeCCCCCCChHH
Q 028834 106 MGSRVSCMVA-CKEDIAASAVLCLGYPLKG----MNGA---VRDELLLQITVPIMFVQVPFLLSLSNII 166 (203)
Q Consensus 106 ~Gg~la~~~a-~~~p~~i~~lv~~~~~~~~----~~~~---~~~~~~~~~~~P~l~~~g~~d~~~~~~~ 166 (203)
+|+..++.++ .....+|+|+++++++-.. .... ..........+|.+++.+++|+..+...
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~ 132 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFER 132 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHH
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHH
Confidence 9999999999 7778899999999987642 1110 0111122345677899999999554433
No 75
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.31 E-value=3.4e-10 Score=87.48 Aligned_cols=138 Identities=12% Similarity=0.034 Sum_probs=95.3
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC-------------CcHHHHHHHHHHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP-------------PKAEKLVEFHTDVVK 88 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~-------------~~~~~~~~~~~~~i~ 88 (203)
+.|.||++|+..+-.. .....++.++. .||.|+++|+.++........ .+......++...++
T Consensus 26 ~~P~VIv~hei~Gl~~--~i~~~a~rlA~--~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~ 101 (236)
T COG0412 26 GFPGVIVLHEIFGLNP--HIRDVARRLAK--AGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALD 101 (236)
T ss_pred CCCEEEEEecccCCch--HHHHHHHHHHh--CCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHH
Confidence 3489999999877642 33455565555 899999999987532111111 112355567777777
Q ss_pred HHHHhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCCCChHH
Q 028834 89 GAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLSLSNII 166 (203)
Q Consensus 89 ~~~~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~~~~ 166 (203)
++...- +.++|.++|+||||.+++.++.+.| .+++.+++-+....... ....++++|+++..++.|+..+...
T Consensus 102 ~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~----~~~~~~~~pvl~~~~~~D~~~p~~~ 176 (236)
T COG0412 102 YLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT----ADAPKIKVPVLLHLAGEDPYIPAAD 176 (236)
T ss_pred HHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc----cccccccCcEEEEecccCCCCChhH
Confidence 776553 3568999999999999999999987 79999877654431111 1135789999999999998555554
Q ss_pred HH
Q 028834 167 EK 168 (203)
Q Consensus 167 ~~ 168 (203)
..
T Consensus 177 ~~ 178 (236)
T COG0412 177 VD 178 (236)
T ss_pred HH
Confidence 33
No 76
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.31 E-value=5.1e-11 Score=91.37 Aligned_cols=108 Identities=20% Similarity=0.318 Sum_probs=71.7
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhc---------CCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKA---------LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA 92 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l---------~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~ 92 (203)
.+.+|||+||.+++.. .++.+...+ ...+.++++|+....... .........+.+.+.++.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~-----q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~g~~l~~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-----QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF--HGRTLQRQAEFLAEAIKYILE 75 (225)
T ss_pred CCCEEEEECcCCCCHh-----HHHHHHHHHhhhhhhccCccceeEEEeccCcccccc--ccccHHHHHHHHHHHHHHHHH
Confidence 3567999999887642 233332221 146889999987632111 112223445556666666665
Q ss_pred hC-----CCCcEEEEEeChhHHHHHHHHhhc---CCccceEEEeccCCCCCC
Q 028834 93 KF-----PGHPLILAGKSMGSRVSCMVACKE---DIAASAVLCLGYPLKGMN 136 (203)
Q Consensus 93 ~~-----~~~~i~l~GhS~Gg~la~~~a~~~---p~~i~~lv~~~~~~~~~~ 136 (203)
.+ ..++|+|+||||||.++..++... +..++.+|+++.|..+.+
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 55 567899999999999999888763 357999999999987544
No 77
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.29 E-value=1.5e-11 Score=93.57 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=65.4
Q ss_pred eEEEEEeccCCCCCCCC-CCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 55 VEVVTFDYPYIAGGKRK-APPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 55 ~~v~~~d~~g~g~g~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
|.|+++|.||.|.+... .........+++.+.+..+++.++.++++++||||||.+++.++..+|++++++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 68999999996543320 134455778899999999999998889999999999999999999999999999999986
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.26 E-value=1.1e-10 Score=92.05 Aligned_cols=112 Identities=22% Similarity=0.340 Sum_probs=81.9
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCc--HHHHHHHHHHHHHHHHHhCCC
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPK--AEKLVEFHTDVVKGAVAKFPG 96 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~ 96 (203)
....+|.||++||.-|+..+++...+.+.+.+ +||.|+++|.||++ |....... -.-..+|++..++++......
T Consensus 71 ~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~--rg~~~Vv~~~Rgcs-~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~ 147 (345)
T COG0429 71 RAAKKPLVVLFHGLEGSSNSPYARGLMRALSR--RGWLVVVFHFRGCS-GEANTSPRLYHSGETEDIRFFLDWLKARFPP 147 (345)
T ss_pred cccCCceEEEEeccCCCCcCHHHHHHHHHHHh--cCCeEEEEeccccc-CCcccCcceecccchhHHHHHHHHHHHhCCC
Confidence 34567899999999999888888778777777 89999999999963 22211111 112337888888888888888
Q ss_pred CcEEEEEeChhH-HHHHHHHhhc-CCccceEEEeccCCC
Q 028834 97 HPLILAGKSMGS-RVSCMVACKE-DIAASAVLCLGYPLK 133 (203)
Q Consensus 97 ~~i~l~GhS~Gg-~la~~~a~~~-p~~i~~lv~~~~~~~ 133 (203)
+++..+|+|+|| +++.+++.+. ...+.+.+.++.|+.
T Consensus 148 r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 148 RPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred CceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 899999999999 6666666552 225677777776653
No 79
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.24 E-value=4.3e-10 Score=85.61 Aligned_cols=141 Identities=18% Similarity=0.217 Sum_probs=89.3
Q ss_pred CccEEEEEcCCCCCCCchHHH--HHHHHHHhcCCCeEEEEEeccCCCC--CCCC----CCCcHHHHHHHHHHHHHHHHHh
Q 028834 22 SSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAG--GKRK----APPKAEKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~--~~~~~~~~l~~g~~v~~~d~~g~g~--g~~~----~~~~~~~~~~~~~~~i~~~~~~ 93 (203)
+.|+||++||.+.+. ..+.. .|..+..+ .||.|+.++-..... +.-. ...........+.+.++++..+
T Consensus 15 ~~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~--~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~ 91 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSA-EDFAAGSGWNALADR--EGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAAR 91 (220)
T ss_pred CCCEEEEeCCCCCCH-HHHHhhcCHHHHhhc--CCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhh
Confidence 579999999998875 22221 12333333 799999998543211 1100 0111123445667777777776
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCc--------------cchhhh---h----hccCCC
Q 028834 94 F--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNG--------------AVRDEL---L----LQITVP 150 (203)
Q Consensus 94 ~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~--------------~~~~~~---~----~~~~~P 150 (203)
+ +.++|++.|+|.||+++..++..+|+.++++...++...+... ...... . .....|
T Consensus 92 ~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~~~~P 171 (220)
T PF10503_consen 92 YNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAYPGYP 171 (220)
T ss_pred cccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCCCCCC
Confidence 5 5679999999999999999999999999999888765431100 000000 0 112369
Q ss_pred EEEEEeCCCCCCChH
Q 028834 151 IMFVQVPFLLSLSNI 165 (203)
Q Consensus 151 ~l~~~g~~d~~~~~~ 165 (203)
.+++||..|..+...
T Consensus 172 ~~v~hG~~D~tV~~~ 186 (220)
T PF10503_consen 172 RIVFHGTADTTVNPQ 186 (220)
T ss_pred EEEEecCCCCccCcc
Confidence 999999999866444
No 80
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.23 E-value=5.8e-11 Score=102.47 Aligned_cols=110 Identities=12% Similarity=-0.072 Sum_probs=78.6
Q ss_pred CCCccEEEEEcCCCCCCC--chHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-CC
Q 028834 20 TSSSPVVVFAHGAGAPSS--SDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PG 96 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 96 (203)
.++.|+||++||++.... ..+.......+.. +||.|+.+|+||+|.+............+|+.+.++++.++- ..
T Consensus 19 ~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~--~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~ 96 (550)
T TIGR00976 19 GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA--QGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCD 96 (550)
T ss_pred CCCCCEEEEecCCCCchhhccccccccHHHHHh--CCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCC
Confidence 346799999999987542 0111112334433 799999999999754332211111457788888898887652 34
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
.+|.++|||+||.+++.+|..+|..++++|..++.
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 58999999999999999999998999999987653
No 81
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.22 E-value=2.2e-10 Score=87.81 Aligned_cols=100 Identities=21% Similarity=0.332 Sum_probs=69.3
Q ss_pred EEEEEcCCCCCCCchHHHHHHHHHHhcCCC-eEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Q 028834 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDA-VEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (203)
Q Consensus 25 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g-~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (203)
+|+|+|+.+++.. .|.++...+... +.|+.+++||.+ .......+.....+.+.+.|. ......+++|+|
T Consensus 2 ~lf~~p~~gG~~~-----~y~~la~~l~~~~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I~---~~~~~gp~~L~G 72 (229)
T PF00975_consen 2 PLFCFPPAGGSAS-----SYRPLARALPDDVIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAIR---ARQPEGPYVLAG 72 (229)
T ss_dssp EEEEESSTTCSGG-----GGHHHHHHHTTTEEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHHH---HHTSSSSEEEEE
T ss_pred eEEEEcCCccCHH-----HHHHHHHhCCCCeEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHhh---hhCCCCCeeehc
Confidence 6999999998763 345555555454 999999999964 222233444444444444443 333344999999
Q ss_pred eChhHHHHHHHHhh---cCCccceEEEeccCCC
Q 028834 104 KSMGSRVSCMVACK---EDIAASAVLCLGYPLK 133 (203)
Q Consensus 104 hS~Gg~la~~~a~~---~p~~i~~lv~~~~~~~ 133 (203)
||+||.+|+++|.+ ....+..+++++++.+
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 99999999999987 3456999999997665
No 82
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=6.2e-10 Score=84.50 Aligned_cols=105 Identities=16% Similarity=0.181 Sum_probs=72.0
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHH-hCCCCcE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA-KFPGHPL 99 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~i 99 (203)
..+..++++|-.|++. + .|+.....+...+.++++++||++..... ...+.++.+++.+...+. -...++.
T Consensus 5 ~~~~~L~cfP~AGGsa-~----~fr~W~~~lp~~iel~avqlPGR~~r~~e---p~~~di~~Lad~la~el~~~~~d~P~ 76 (244)
T COG3208 5 GARLRLFCFPHAGGSA-S----LFRSWSRRLPADIELLAVQLPGRGDRFGE---PLLTDIESLADELANELLPPLLDAPF 76 (244)
T ss_pred CCCceEEEecCCCCCH-H----HHHHHHhhCCchhheeeecCCCcccccCC---cccccHHHHHHHHHHHhccccCCCCe
Confidence 4566788888888876 3 34444444545799999999997544332 233555566666665555 3456789
Q ss_pred EEEEeChhHHHHHHHHhhc---CCccceEEEeccCCC
Q 028834 100 ILAGKSMGSRVSCMVACKE---DIAASAVLCLGYPLK 133 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~---p~~i~~lv~~~~~~~ 133 (203)
.++||||||++|+++|.+. ...+.++.+.+...+
T Consensus 77 alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred eecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 9999999999999999872 224777777764433
No 83
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.19 E-value=1.4e-10 Score=94.91 Aligned_cols=111 Identities=20% Similarity=0.266 Sum_probs=64.7
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh--CC
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--FP 95 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~--~~ 95 (203)
.++++.|+||++-|+.+.. .++...+.+.+.. .|+.++++|.||.|.....+.. ...-..+.++++++.+. .+
T Consensus 185 ~~~~p~P~VIv~gGlDs~q-eD~~~l~~~~l~~--rGiA~LtvDmPG~G~s~~~~l~--~D~~~l~~aVLd~L~~~p~VD 259 (411)
T PF06500_consen 185 SGEKPYPTVIVCGGLDSLQ-EDLYRLFRDYLAP--RGIAMLTVDMPGQGESPKWPLT--QDSSRLHQAVLDYLASRPWVD 259 (411)
T ss_dssp SSSS-EEEEEEE--TTS-G-GGGHHHHHCCCHH--CT-EEEEE--TTSGGGTTT-S---S-CCHHHHHHHHHHHHSTTEE
T ss_pred CCCCCCCEEEEeCCcchhH-HHHHHHHHHHHHh--CCCEEEEEccCCCcccccCCCC--cCHHHHHHHHHHHHhcCCccC
Confidence 3445567666666665443 3333234444433 8999999999997654322111 11122344555555443 25
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
..+|.++|.|+||..|.++|..++++++++|+++++..
T Consensus 260 ~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 260 HTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred hhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 56899999999999999999988889999999998754
No 84
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.17 E-value=2.6e-10 Score=89.92 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=74.3
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC--CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC---
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--- 94 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~--~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~--- 94 (203)
....|+++++||.-++. . .|+.+...|+ .+..++++|.|-+|.+.....-+ ...+++.+..+++..
T Consensus 49 ~~~~Pp~i~lHGl~GS~-~----Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~----~~~ma~dv~~Fi~~v~~~ 119 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSK-E----NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHN----YEAMAEDVKLFIDGVGGS 119 (315)
T ss_pred cCCCCceEEecccccCC-C----CHHHHHHHhcccccCceEEEecccCCCCccccccC----HHHHHHHHHHHHHHcccc
Confidence 34678999999988876 3 4666666664 57899999999964333222222 344444455555444
Q ss_pred -CCCcEEEEEeChhH-HHHHHHHhhcCCccceEEEeccC
Q 028834 95 -PGHPLILAGKSMGS-RVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 95 -~~~~i~l~GhS~Gg-~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
...+++|+|||||| .+++..+...|+.+..+|+++.+
T Consensus 120 ~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~s 158 (315)
T KOG2382|consen 120 TRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDIS 158 (315)
T ss_pred cccCCceecccCcchHHHHHHHHHhcCcccceeEEEecC
Confidence 35689999999999 88888888899999999988743
No 85
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.17 E-value=2.1e-10 Score=86.88 Aligned_cols=99 Identities=16% Similarity=0.211 Sum_probs=71.1
Q ss_pred EEEEcCCCCCCCch-HHHHHHH-HHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh-----CCCCc
Q 028834 26 VVFAHGAGAPSSSD-WMIKWKD-MLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-----FPGHP 98 (203)
Q Consensus 26 vv~~HG~~~~~~~~-~~~~~~~-~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~ 98 (203)
||++||+|+..+.. ....+.. +... .|+.|+.+|||-. +.......++|+.+.+++++++ .+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~--~g~~v~~~~Yrl~------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE--RGFVVVSIDYRLA------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH--HTSEEEEEE---T------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh--ccEEEEEeecccc------ccccccccccccccceeeeccccccccccccc
Confidence 79999988876542 2222333 3333 6999999999962 3345568899999999999987 56779
Q ss_pred EEEEEeChhHHHHHHHHhhcC----CccceEEEeccCC
Q 028834 99 LILAGKSMGSRVSCMVACKED----IAASAVLCLGYPL 132 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p----~~i~~lv~~~~~~ 132 (203)
|+|+|+|.||.+++.++.... ..+++++++++..
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 999999999999999998632 2589999999864
No 86
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.16 E-value=4.4e-10 Score=85.62 Aligned_cols=100 Identities=20% Similarity=0.271 Sum_probs=71.8
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHH---HHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKD---MLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~---~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
.++++++||+.++.. .|.. .+......|.++.+|+||+|... .. ........+.+..+++.++..++
T Consensus 21 ~~~i~~~hg~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~---~~--~~~~~~~~~~~~~~~~~~~~~~~ 90 (282)
T COG0596 21 GPPLVLLHGFPGSSS-----VWRPVFKVLPALAARYRVIAPDLRGHGRSD---PA--GYSLSAYADDLAALLDALGLEKV 90 (282)
T ss_pred CCeEEEeCCCCCchh-----hhHHHHHHhhccccceEEEEecccCCCCCC---cc--cccHHHHHHHHHHHHHHhCCCce
Confidence 458999999987763 2333 22221112999999999864332 11 12222226677777777777789
Q ss_pred EEEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
+++|||+||.+++.++.++|+.++++|+++++.
T Consensus 91 ~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 91 VLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred EEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 999999999999999999999999999998653
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.16 E-value=4.7e-10 Score=90.53 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=70.0
Q ss_pred CCCccEEEEEcCCCCCCCch-HHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHH---hC-
Q 028834 20 TSSSPVVVFAHGAGAPSSSD-WMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA---KF- 94 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~-~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~---~~- 94 (203)
....|+||++||+|...++. ....+.+.+.. ..|+.|+++||+. .+... .....+|+.+.++++.+ .+
T Consensus 78 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~-~~g~~Vv~vdYrl--ape~~----~p~~~~D~~~a~~~l~~~~~~~~ 150 (318)
T PRK10162 78 PDSQATLFYLHGGGFILGNLDTHDRIMRLLAS-YSGCTVIGIDYTL--SPEAR----FPQAIEEIVAVCCYFHQHAEDYG 150 (318)
T ss_pred CCCCCEEEEEeCCcccCCCchhhhHHHHHHHH-HcCCEEEEecCCC--CCCCC----CCCcHHHHHHHHHHHHHhHHHhC
Confidence 34568999999988654331 11223333322 1599999999996 33221 22345666666666543 33
Q ss_pred -CCCcEEEEEeChhHHHHHHHHhhc------CCccceEEEeccCC
Q 028834 95 -PGHPLILAGKSMGSRVSCMVACKE------DIAASAVLCLGYPL 132 (203)
Q Consensus 95 -~~~~i~l~GhS~Gg~la~~~a~~~------p~~i~~lv~~~~~~ 132 (203)
+.++|+|+|+|+||.+++.++... +..+++++++.+..
T Consensus 151 ~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 151 INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 456899999999999999988752 35789999887654
No 88
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.16 E-value=7.1e-10 Score=91.25 Aligned_cols=129 Identities=19% Similarity=0.189 Sum_probs=67.1
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCC-------------------------C--
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-------------------------P-- 73 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~-------------------------~-- 73 (203)
+.-|+|||.||++++...+- .++.-++. +||.|+++|.+......... .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS--~~~~eLAS--~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYS--AICGELAS--HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFD 173 (379)
T ss_dssp S-EEEEEEE--TT--TTTTH--HHHHHHHH--TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----
T ss_pred CCCCEEEEeCCCCcchhhHH--HHHHHHHh--CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccccc
Confidence 56899999999999875432 45555544 89999999999521100000 0
Q ss_pred Cc---------HHHHHHHHHHHHHHHHH----------------------hCCCCcEEEEEeChhHHHHHHHHhhcCCcc
Q 028834 74 PK---------AEKLVEFHTDVVKGAVA----------------------KFPGHPLILAGKSMGSRVSCMVACKEDIAA 122 (203)
Q Consensus 74 ~~---------~~~~~~~~~~~i~~~~~----------------------~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i 122 (203)
.. ......++..+++.+.+ .++.++|.++|||+||..++..+.+. .++
T Consensus 174 ~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~ 252 (379)
T PF03403_consen 174 PEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRF 252 (379)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT-
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCc
Confidence 00 00112233333333321 11234799999999999999998887 589
Q ss_pred ceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCC
Q 028834 123 SAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPF 158 (203)
Q Consensus 123 ~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~ 158 (203)
++.|++++.+..... +....++.|+++++.+.
T Consensus 253 ~~~I~LD~W~~Pl~~----~~~~~i~~P~L~InSe~ 284 (379)
T PF03403_consen 253 KAGILLDPWMFPLGD----EIYSKIPQPLLFINSES 284 (379)
T ss_dssp -EEEEES---TTS-G----GGGGG--S-EEEEEETT
T ss_pred ceEEEeCCcccCCCc----ccccCCCCCEEEEECcc
Confidence 999999987753332 22356789999998774
No 89
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.16 E-value=8.5e-10 Score=94.07 Aligned_cols=109 Identities=7% Similarity=-0.041 Sum_probs=76.4
Q ss_pred CccEEEEEcCCCCCCCchHH---HHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCc
Q 028834 22 SSPVVVFAHGAGAPSSSDWM---IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~---~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
.+++||++||.......-.+ +.+.+.+.+ +||.|+++|++++|...+.. ...++..+.+.+.++.+.+..+.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~--qGf~V~~iDwrgpg~s~~~~-~~ddY~~~~i~~al~~v~~~~g~~k 263 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVE--QGHTVFVISWRNPDASQADK-TFDDYIRDGVIAALEVVEAITGEKQ 263 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHH--CCcEEEEEECCCCCcccccC-ChhhhHHHHHHHHHHHHHHhcCCCC
Confidence 46779999998654321101 134555544 89999999999965333221 1223455678888888888888889
Q ss_pred EEEEEeChhHHHHH----HHHhhc-CCccceEEEeccCCC
Q 028834 99 LILAGKSMGSRVSC----MVACKE-DIAASAVLCLGYPLK 133 (203)
Q Consensus 99 i~l~GhS~Gg~la~----~~a~~~-p~~i~~lv~~~~~~~ 133 (203)
++++||||||.++. .++... +++++++++++++..
T Consensus 264 v~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 264 VNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred eEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 99999999999852 244444 778999999987764
No 90
>PRK10115 protease 2; Provisional
Probab=99.12 E-value=1.1e-09 Score=96.63 Aligned_cols=151 Identities=9% Similarity=-0.085 Sum_probs=101.5
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCC-CCCCCCC----CcHHHHHHHHHHHHHHHHHhC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIA-GGKRKAP----PKAEKLVEFHTDVVKGAVAKF 94 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g-~g~~~~~----~~~~~~~~~~~~~i~~~~~~~ 94 (203)
.++.|+||+.||..+....+.+......+. .+|+.|+.+++||.+ .|..... ......++|+.+.+++++++.
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~--~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g 519 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFSRLSLL--DRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLG 519 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHHHHHHH--HCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcC
Confidence 345699999999776664433222223333 379999999999843 2221100 111256788998999988774
Q ss_pred --CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCC--------------------CCcc----------chhh
Q 028834 95 --PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKG--------------------MNGA----------VRDE 142 (203)
Q Consensus 95 --~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~--------------------~~~~----------~~~~ 142 (203)
+.+++.+.|.|.||+++..++.++|+.++++|+..+...- .+.. +...
T Consensus 520 ~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~ 599 (686)
T PRK10115 520 YGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYD 599 (686)
T ss_pred CCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchh
Confidence 5678999999999999999999999999999977654320 0000 1111
Q ss_pred hhhccCCC-EEEEEeCCCCCCChHHHHHHHH
Q 028834 143 LLLQITVP-IMFVQVPFLLSLSNIIEKEFYL 172 (203)
Q Consensus 143 ~~~~~~~P-~l~~~g~~d~~~~~~~~~~~~~ 172 (203)
.+..++.| +|+++|.+|+-.+..+..+...
T Consensus 600 ~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a 630 (686)
T PRK10115 600 NVTAQAYPHLLVTTGLHDSQVQYWEPAKWVA 630 (686)
T ss_pred ccCccCCCceeEEecCCCCCcCchHHHHHHH
Confidence 23455789 5677999999777777665554
No 91
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.11 E-value=3.7e-10 Score=93.33 Aligned_cols=106 Identities=16% Similarity=0.092 Sum_probs=78.4
Q ss_pred CccEEEEEcCCCCCCCc-----------hHHHHHHHHH---HhcC-CCeEEEEEeccCCCC------CCCCC----C---
Q 028834 22 SSPVVVFAHGAGAPSSS-----------DWMIKWKDML---GKAL-DAVEVVTFDYPYIAG------GKRKA----P--- 73 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~-----------~~~~~~~~~~---~~l~-~g~~v~~~d~~g~g~------g~~~~----~--- 73 (203)
..++||+.|++.++.+. .| |..++ ..+. ..|-|+++|..|.+. |...+ +
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gw---w~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg 131 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGY---WDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTG 131 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCccc---HHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCC
Confidence 45899999999886421 12 44443 2233 689999999998532 11110 1
Q ss_pred -----CcHHHHHHHHHHHHHHHHHhCCCCcEE-EEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 74 -----PKAEKLVEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 74 -----~~~~~~~~~~~~~i~~~~~~~~~~~i~-l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
.......+++.+.+..++++++.+++. ++||||||+++++++.++|++++++|++++
T Consensus 132 ~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 132 KPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred CccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 112257888888888899988988886 999999999999999999999999999964
No 92
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.11 E-value=9.5e-10 Score=85.04 Aligned_cols=103 Identities=27% Similarity=0.347 Sum_probs=73.2
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC---
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--- 94 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~--- 94 (203)
..+.-|++||+||+.-.. .+ +..++..+. +||.|+++|+..... .......+..++.++++.+.+
T Consensus 13 ~~g~yPVv~f~~G~~~~~--s~---Ys~ll~hvAShGyIVV~~d~~~~~~------~~~~~~~~~~~~vi~Wl~~~L~~~ 81 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLIN--SW---YSQLLEHVASHGYIVVAPDLYSIGG------PDDTDEVASAAEVIDWLAKGLESK 81 (259)
T ss_pred CCCCcCEEEEeCCcCCCH--HH---HHHHHHHHHhCceEEEEecccccCC------CCcchhHHHHHHHHHHHHhcchhh
Confidence 345689999999998443 22 455555443 899999999765311 112245555666666655431
Q ss_pred -------CCCcEEEEEeChhHHHHHHHHhhc-----CCccceEEEeccCC
Q 028834 95 -------PGHPLILAGKSMGSRVSCMVACKE-----DIAASAVLCLGYPL 132 (203)
Q Consensus 95 -------~~~~i~l~GhS~Gg~la~~~a~~~-----p~~i~~lv~~~~~~ 132 (203)
+..++.|.|||-||-+++.++..+ +.+++++++++|.-
T Consensus 82 l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 82 LPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 345899999999999999999886 56899999999754
No 93
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.10 E-value=4.4e-09 Score=75.94 Aligned_cols=129 Identities=13% Similarity=0.086 Sum_probs=85.2
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (203)
+.++++||++++...+ |.........+ +-.++.+ .......+++.+.+...+... .++++|++
T Consensus 3 ~~~lIVpG~~~Sg~~H----Wq~~we~~l~~--a~rveq~----------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYGGSGPNH----WQSRWESALPN--ARRVEQD----------DWEAPVLDDWIARLEKEVNAA-EGPVVLVA 65 (181)
T ss_pred ceEEEecCCCCCChhH----HHHHHHhhCcc--chhcccC----------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEE
Confidence 5699999999887544 44444331122 2222222 111246677777777776665 55799999
Q ss_pred eChhHHHHHHHHhhcCCccceEEEeccCCCCCCccch-------hhhhhccCCCEEEEEeCCCCCCChHHHHHH
Q 028834 104 KSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVR-------DELLLQITVPIMFVQVPFLLSLSNIIEKEF 170 (203)
Q Consensus 104 hS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~-------~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~ 170 (203)
||.|+..++.++......|+|++++++|....+.... ......+..|.+++.+.+|+ +........
T Consensus 66 HSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vvaSrnDp-~~~~~~a~~ 138 (181)
T COG3545 66 HSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVVASRNDP-YVSYEHAED 138 (181)
T ss_pred ecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCccccCCCceeEEEecCCC-CCCHHHHHH
Confidence 9999999999999876799999999998764432111 11123456788999999999 444443433
No 94
>PLN02872 triacylglycerol lipase
Probab=99.09 E-value=2.4e-10 Score=94.52 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=67.4
Q ss_pred CccEEEEEcCCCCCCCchHH-----HHHHHHHHhcCCCeEEEEEeccCCCCCCCC-----C-----CCcHHHHH-HHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDWM-----IKWKDMLGKALDAVEVVTFDYPYIAGGKRK-----A-----PPKAEKLV-EFHTD 85 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~-----~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~-----~-----~~~~~~~~-~~~~~ 85 (203)
++|+|+++||++.++.. |. +.....+.. +||.|+.+|.||++.+..+ . .-...... .|+.+
T Consensus 73 ~~~~Vll~HGl~~ss~~-w~~~~~~~sla~~La~--~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDA-WFLNSPEQSLGFILAD--HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred CCCeEEEeCcccccccc-eeecCcccchHHHHHh--CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHH
Confidence 46889999998876532 21 122233443 7999999999996422110 0 01222333 57777
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC---ccceEEEeccC
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI---AASAVLCLGYP 131 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~---~i~~lv~~~~~ 131 (203)
.++++.+.. .++++++||||||.+++.++ .+|+ +++.++++++.
T Consensus 150 ~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 150 MIHYVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred HHHHHHhcc-CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 788776543 47899999999999998555 4554 56666666543
No 95
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.07 E-value=5.4e-09 Score=77.76 Aligned_cols=129 Identities=12% Similarity=0.093 Sum_probs=82.2
Q ss_pred EEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 028834 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (203)
Q Consensus 26 vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS 105 (203)
++++||+.++..+.-....++.++.......+..++++.. .+...+.+..+++....+.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------p~~a~~~l~~~i~~~~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------PEEAIAQLEQLIEELKPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------HHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 7999999998876444455666665334566777777631 12223344555555565669999999
Q ss_pred hhHHHHHHHHhhcCCccceEEEeccCCCC---------CCc--------cchh---hh-----h--hccCCCEEEEEeCC
Q 028834 106 MGSRVSCMVACKEDIAASAVLCLGYPLKG---------MNG--------AVRD---EL-----L--LQITVPIMFVQVPF 158 (203)
Q Consensus 106 ~Gg~la~~~a~~~p~~i~~lv~~~~~~~~---------~~~--------~~~~---~~-----~--~~~~~P~l~~~g~~ 158 (203)
|||..|..++.+++ +++ |++.|.+.. ... .... .. . .....+.++++++.
T Consensus 68 lGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~ 144 (187)
T PF05728_consen 68 LGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVLLQTG 144 (187)
T ss_pred hHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEEEecC
Confidence 99999999999874 555 667776541 100 0000 00 1 12245789999999
Q ss_pred CCCCChHHHHHHH
Q 028834 159 LLSLSNIIEKEFY 171 (203)
Q Consensus 159 d~~~~~~~~~~~~ 171 (203)
|+..+-......|
T Consensus 145 DEvLd~~~a~~~~ 157 (187)
T PF05728_consen 145 DEVLDYREAVAKY 157 (187)
T ss_pred CcccCHHHHHHHh
Confidence 9977775555444
No 96
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.07 E-value=5e-09 Score=80.81 Aligned_cols=140 Identities=13% Similarity=-0.026 Sum_probs=89.4
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCC--CCcHHHHHHHHHHHHHHHHHhCCCC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAKFPGH 97 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (203)
.+.+.++||+||+..+- ..-....+++...+.....++.+.||..|.-..-. ..........+.+.+..+.+..+..
T Consensus 15 ~~~~~vlvfVHGyn~~f-~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSF-EDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCCCeEEEEEeCCCCCH-HHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc
Confidence 45678999999998664 33334555555555433489999999853211100 0122334456666666666665678
Q ss_pred cEEEEEeChhHHHHHHHHhh----cC-----CccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCC
Q 028834 98 PLILAGKSMGSRVSCMVACK----ED-----IAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~----~p-----~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~ 160 (203)
+|.|++||||+.+.+..... .+ .++..++++++-.+..........+.....++.+.+..+|.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~ 165 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDR 165 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCch
Confidence 99999999999999988765 21 36888998887664211111122344455788888888885
No 97
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.06 E-value=8.2e-09 Score=76.84 Aligned_cols=160 Identities=18% Similarity=0.108 Sum_probs=105.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKR-KAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
+...++|++||+-.+....++...+..+.+ .|+.++.+|.+|.|.++. .......+..+|+..+++++.+. +..=-
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~--~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~-nr~v~ 107 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEK--EGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS-NRVVP 107 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHh--cCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-ceEEE
Confidence 445689999999988766666566666666 799999999999654432 23344556778888888887552 11124
Q ss_pred EEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCcc------------------------------c----------
Q 028834 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGA------------------------------V---------- 139 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~------------------------------~---------- 139 (203)
+++|||-||..++.+++++.+ ++.+|-+++-...+... .
T Consensus 108 vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLn 186 (269)
T KOG4667|consen 108 VILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLN 186 (269)
T ss_pred EEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHh
Confidence 789999999999999999876 77777665433211100 0
Q ss_pred ----hhhhhhccCCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhcccC
Q 028834 140 ----RDELLLQITVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLSD 184 (203)
Q Consensus 140 ----~~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~~ 184 (203)
....-...++|+|-+||..|...+-.....+..+-+.-++..++.
T Consensus 187 td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEg 235 (269)
T KOG4667|consen 187 TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEG 235 (269)
T ss_pred chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecC
Confidence 011123457999999999999555555444444433345555553
No 98
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.04 E-value=6.4e-09 Score=77.11 Aligned_cols=141 Identities=18% Similarity=0.198 Sum_probs=88.8
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCC----CCCC------------CCCCcHHHHHHHHHH
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIA----GGKR------------KAPPKAEKLVEFHTD 85 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g----~g~~------------~~~~~~~~~~~~~~~ 85 (203)
+.+|||+||.|.+.. .|.+++..+. .+..-+.+.-|.+- .|.. .... .........+
T Consensus 3 ~atIi~LHglGDsg~-----~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~ 76 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-----GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAAD 76 (206)
T ss_pred eEEEEEEecCCCCCc-----cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHH
Confidence 467999999998874 4667776665 78888888655432 0100 0011 1222333333
Q ss_pred HHHHHHHh----C-CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCC
Q 028834 86 VVKGAVAK----F-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 86 ~i~~~~~~----~-~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~ 160 (203)
.+..++++ . ...+|.+.|+||||.++++.+..++..+.+++..++-.+................|.+..||+.|+
T Consensus 77 ~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~ 156 (206)
T KOG2112|consen 77 NIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADP 156 (206)
T ss_pred HHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheecccCCc
Confidence 34444433 2 446899999999999999999999888999887776554222111111111127899999999999
Q ss_pred CCChHHHHH
Q 028834 161 SLSNIIEKE 169 (203)
Q Consensus 161 ~~~~~~~~~ 169 (203)
.++-.....
T Consensus 157 ~vp~~~g~~ 165 (206)
T KOG2112|consen 157 LVPFRFGEK 165 (206)
T ss_pred eeehHHHHH
Confidence 666554443
No 99
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.04 E-value=1.8e-09 Score=90.72 Aligned_cols=150 Identities=34% Similarity=0.527 Sum_probs=108.7
Q ss_pred CCCccEEEEEcCCC-CCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCc
Q 028834 20 TSSSPVVVFAHGAG-APSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 20 ~~~~~~vv~~HG~~-~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
-...|++++.||.. ....++|+..|...+....+-..+..+|++..-+|.+ .....++........+.+....+...+
T Consensus 173 v~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~n-I~h~ae~~vSf~r~kvlei~gefpha~ 251 (784)
T KOG3253|consen 173 VPASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGAN-IKHAAEYSVSFDRYKVLEITGEFPHAP 251 (784)
T ss_pred ccCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcc-hHHHHHHHHHHhhhhhhhhhccCCCCc
Confidence 34578899999988 4445677778888887755667788889887533321 222233444444444555556677789
Q ss_pred EEEEEeChhHHHHHHHHhhcC-CccceEEEeccCCCCC--CccchhhhhhccCCCEEEEEeCCCCCCChHHHHHHH
Q 028834 99 LILAGKSMGSRVSCMVACKED-IAASAVLCLGYPLKGM--NGAVRDELLLQITVPIMFVQVPFLLSLSNIIEKEFY 171 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p-~~i~~lv~~~~~~~~~--~~~~~~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~ 171 (203)
|+|+|+|||+.++..++.... ..|+++||++.|.... +...+++.+..++.|.|++.|..|. .+.....+..
T Consensus 252 IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~-mcspn~ME~v 326 (784)
T KOG3253|consen 252 IILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDH-MCSPNSMEEV 326 (784)
T ss_pred eEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcc-cCCHHHHHHH
Confidence 999999999999988877643 4699999999998733 3467788889999999999999998 6555555444
No 100
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.02 E-value=6.7e-09 Score=80.53 Aligned_cols=108 Identities=18% Similarity=0.206 Sum_probs=79.8
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCC-
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG- 96 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 96 (203)
+.++...+||=+||..|+- .+| ..+++.+.+ .|.+++.++|||+|... ......+.-.+-++.+..+++.++.
T Consensus 30 ~~gs~~gTVv~~hGsPGSH-~DF-kYi~~~l~~--~~iR~I~iN~PGf~~t~--~~~~~~~~n~er~~~~~~ll~~l~i~ 103 (297)
T PF06342_consen 30 PSGSPLGTVVAFHGSPGSH-NDF-KYIRPPLDE--AGIRFIGINYPGFGFTP--GYPDQQYTNEERQNFVNALLDELGIK 103 (297)
T ss_pred CCCCCceeEEEecCCCCCc-cch-hhhhhHHHH--cCeEEEEeCCCCCCCCC--CCcccccChHHHHHHHHHHHHHcCCC
Confidence 3455667899999988874 444 355666666 89999999999975333 2233334444555667777777653
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
++++.+|||.|+-.|+.++..+| ..|++++.++..
T Consensus 104 ~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 104 GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred CceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 58999999999999999999985 679999998654
No 101
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.00 E-value=4e-09 Score=92.98 Aligned_cols=92 Identities=16% Similarity=0.200 Sum_probs=63.4
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCC------------C------------CCcH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRK------------A------------PPKA 76 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~------------~------------~~~~ 76 (203)
..|+|||+||++++.. .|..+...+. .||.|+++|+||||..... . .+..
T Consensus 448 g~P~VVllHG~~g~~~-----~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~ 522 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-----NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL 522 (792)
T ss_pred CCcEEEEeCCCCCCHH-----HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH
Confidence 3568999999998763 3444444443 7999999999997643111 0 0134
Q ss_pred HHHHHHHHHHHHHHH------Hh------CCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 77 EKLVEFHTDVVKGAV------AK------FPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 77 ~~~~~~~~~~i~~~~------~~------~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
.+...|+......+. .. ++..+++++||||||.++..++...
T Consensus 523 rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 523 RQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 556666666555554 11 3456899999999999999999763
No 102
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.99 E-value=7.1e-09 Score=83.82 Aligned_cols=111 Identities=17% Similarity=0.201 Sum_probs=68.4
Q ss_pred CCCccEEEEEcCCCCCC-CchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcH----HHHHHHHHHHHHHHHHh
Q 028834 20 TSSSPVVVFAHGAGAPS-SSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKA----EKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~----~~~~~~~~~~i~~~~~~ 93 (203)
...+|++|++||+.++. ...|...+.+.+.... .++.|+++|+... ........ ....+.+++.+..+.+.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~---a~~~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRG---ASNNYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHH---HSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhh---ccccccchhhhHHHHHHHHHHHHHHHHhh
Confidence 35689999999999888 5566656655443321 4899999999752 21111111 12233444455555533
Q ss_pred --CCCCcEEEEEeChhHHHHHHHHhhcCC--ccceEEEeccCCC
Q 028834 94 --FPGHPLILAGKSMGSRVSCMVACKEDI--AASAVLCLGYPLK 133 (203)
Q Consensus 94 --~~~~~i~l~GhS~Gg~la~~~a~~~p~--~i~~lv~~~~~~~ 133 (203)
...++|.|||||+||++|-.+...... +|..++.++|+.+
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 355789999999999999999998766 8999999998766
No 103
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.97 E-value=6e-09 Score=83.83 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=73.6
Q ss_pred CccEEEEEcCCCCCCCchHHH--HHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-----
Q 028834 22 SSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF----- 94 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~--~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~----- 94 (203)
..|+||++||.|+..++.... ........ .|+.|+++|||-. .. ..+...++|+.+.+.++.++.
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~--~g~~vv~vdYrla--Pe----~~~p~~~~d~~~a~~~l~~~~~~~g~ 149 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAA--AGAVVVSVDYRLA--PE----HPFPAALEDAYAAYRWLRANAAELGI 149 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHH--cCCEEEecCCCCC--CC----CCCCchHHHHHHHHHHHHhhhHhhCC
Confidence 479999999988877553221 22333333 8999999999973 22 234466677777777777652
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhcCC----ccceEEEeccCC
Q 028834 95 PGHPLILAGKSMGSRVSCMVACKEDI----AASAVLCLGYPL 132 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~~p~----~i~~lv~~~~~~ 132 (203)
+.++|+++|+|.||.+++.++....+ ..++.+++++..
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~ 191 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLL 191 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence 46789999999999999999887432 567777777654
No 104
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.96 E-value=7.8e-09 Score=78.70 Aligned_cols=145 Identities=11% Similarity=-0.006 Sum_probs=67.4
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCC-CeEEEEEeccCCCCCCCCCC---------------------C----c
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALD-AVEVVTFDYPYIAGGKRKAP---------------------P----K 75 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~-g~~v~~~d~~g~g~g~~~~~---------------------~----~ 75 (203)
.++-|+++||++.+. ..+......+-..+.. ++..+.+|-|..-....... . .
T Consensus 3 ~k~riLcLHG~~~na-~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA-EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--H-HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCH-HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 467799999999875 4554455555555555 89999998775320000000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc--------CCccceEEEeccCCCCCCccchhhhhhcc
Q 028834 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE--------DIAASAVLCLGYPLKGMNGAVRDELLLQI 147 (203)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~--------p~~i~~lv~~~~~~~~~~~~~~~~~~~~~ 147 (203)
....+++..+.+.+.++..+. =..|+|||+||.+|..++... ...++-+|++++..+.............+
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i 160 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKI 160 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT-
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccC
Confidence 112233333333333333222 357999999999999888641 23578899998776532211111123467
Q ss_pred CCCEEEEEeCCCCCCChHHHH
Q 028834 148 TVPIMFVQVPFLLSLSNIIEK 168 (203)
Q Consensus 148 ~~P~l~~~g~~d~~~~~~~~~ 168 (203)
++|++.++|.+|+...+....
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~ 181 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSE 181 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHH
T ss_pred CCCeEEEEeCCCCCcchHHHH
Confidence 999999999999966644433
No 105
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.95 E-value=1e-08 Score=79.73 Aligned_cols=135 Identities=19% Similarity=0.087 Sum_probs=81.5
Q ss_pred CCc-cEEEEEcCCCCCCCchHHHHHHHHHHh------cC--CCeEEEEEeccC-CCCCCCCCCCcHHHHHHHHHHHHH-H
Q 028834 21 SSS-PVVVFAHGAGAPSSSDWMIKWKDMLGK------AL--DAVEVVTFDYPY-IAGGKRKAPPKAEKLVEFHTDVVK-G 89 (203)
Q Consensus 21 ~~~-~~vv~~HG~~~~~~~~~~~~~~~~~~~------l~--~g~~v~~~d~~g-~g~g~~~~~~~~~~~~~~~~~~i~-~ 89 (203)
++. |+|+|+||.|..+.. . ....... +. .++=|+++.|-- +.+..+ ..........+.+. .
T Consensus 188 kky~PLvlfLHgagq~g~d-n---~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~----~t~~~l~~~idli~~v 259 (387)
T COG4099 188 KKYYPLVLFLHGAGQGGSD-N---DKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE----KTLLYLIEKIDLILEV 259 (387)
T ss_pred CccccEEEEEecCCCCCch-h---hhhhhcCccceeeecccCceEEEccccccccccccc----ccchhHHHHHHHHHHH
Confidence 344 999999999877632 1 1222111 11 223344444321 100111 11233344444555 4
Q ss_pred HHHhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCCCChHHH
Q 028834 90 AVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLSLSNIIE 167 (203)
Q Consensus 90 ~~~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~~~~~ 167 (203)
+.+.+ +.++|.++|.|+||+.+..++.+.|+.+++.+.+++-... ....+ ...+.|.+++|+.+|...+-...
T Consensus 260 las~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~-v~lv~----~lk~~piWvfhs~dDkv~Pv~nS 334 (387)
T COG4099 260 LASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR-VYLVR----TLKKAPIWVFHSSDDKVIPVSNS 334 (387)
T ss_pred HhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch-hhhhh----hhccCceEEEEecCCCccccCcc
Confidence 44554 5568999999999999999999999999999998875431 11111 23578999999999975544433
Q ss_pred H
Q 028834 168 K 168 (203)
Q Consensus 168 ~ 168 (203)
+
T Consensus 335 r 335 (387)
T COG4099 335 R 335 (387)
T ss_pred e
Confidence 3
No 106
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.95 E-value=2.4e-08 Score=78.63 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=77.4
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhc-CCCeEEEEEeccCCCCCCCC-------CCCcHHHHHHHHHHHHHHHHHhC
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRK-------APPKAEKLVEFHTDVVKGAVAKF 94 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l-~~g~~v~~~d~~g~g~g~~~-------~~~~~~~~~~~~~~~i~~~~~~~ 94 (203)
+.+++|++|..|-. .|...|...+.+. ...+.|+++.+.|+...... ..-+....++--.+.+++++...
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 57899999998875 2334566656554 47999999999997432222 11123334444455555555544
Q ss_pred --CCCcEEEEEeChhHHHHHHHHhhcC---CccceEEEeccCCC
Q 028834 95 --PGHPLILAGKSMGSRVSCMVACKED---IAASAVLCLGYPLK 133 (203)
Q Consensus 95 --~~~~i~l~GhS~Gg~la~~~a~~~p---~~i~~lv~~~~~~~ 133 (203)
...+++|+|||+|+.++++++.+.+ .+|.+++++-|...
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 4568999999999999999999988 78999998887765
No 107
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.94 E-value=1.2e-08 Score=79.94 Aligned_cols=129 Identities=16% Similarity=0.226 Sum_probs=83.2
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCC------CC--CCC------------------
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGG------KR--KAP------------------ 73 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g------~~--~~~------------------ 73 (203)
.++-|+|||.||+|++. .+...++--++. +||.|.+++.|.+..- .. ..+
T Consensus 115 ~~k~PvvvFSHGLggsR--t~YSa~c~~LAS--hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef 190 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSR--TLYSAYCTSLAS--HGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEF 190 (399)
T ss_pred CCCccEEEEecccccch--hhHHHHhhhHhh--CceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeE
Confidence 56779999999999885 233355555544 9999999998875410 00 000
Q ss_pred ----CcHHHHHHHHHHHHHHH-----------------------HHhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEE
Q 028834 74 ----PKAEKLVEFHTDVVKGA-----------------------VAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 126 (203)
Q Consensus 74 ----~~~~~~~~~~~~~i~~~-----------------------~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv 126 (203)
.......+++..+++-+ +.+++..++.++|||+||..+....+.+. .+++.|
T Consensus 191 ~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI 269 (399)
T KOG3847|consen 191 HIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAI 269 (399)
T ss_pred EeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeee
Confidence 01222333444333322 22233457899999999999998888764 699999
Q ss_pred EeccCCCCCCccchhhhhhccCCCEEEEEeC
Q 028834 127 CLGYPLKGMNGAVRDELLLQITVPIMFVQVP 157 (203)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~ 157 (203)
++++-+.... .......+.|++++..+
T Consensus 270 ~lD~WM~Pl~----~~~~~~arqP~~finv~ 296 (399)
T KOG3847|consen 270 ALDAWMFPLD----QLQYSQARQPTLFINVE 296 (399)
T ss_pred eeeeeecccc----hhhhhhccCCeEEEEcc
Confidence 8887664322 23356788899998744
No 108
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.91 E-value=2.2e-08 Score=77.85 Aligned_cols=101 Identities=17% Similarity=0.203 Sum_probs=74.0
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (203)
|+++++|+.+|... .|..+...+.....|+.++.||.+.+.. .....+.+.+.+.+.|. +.....+++|+|
T Consensus 1 ~pLF~fhp~~G~~~-----~~~~L~~~l~~~~~v~~l~a~g~~~~~~-~~~~l~~~a~~yv~~Ir---~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGGSVL-----AYAPLAAALGPLLPVYGLQAPGYGAGEQ-PFASLDDMAAAYVAAIR---RVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCCcHH-----HHHHHHHHhccCceeeccccCccccccc-ccCCHHHHHHHHHHHHH---HhCCCCCEEEEe
Confidence 57999999988763 5777777777779999999999743332 33334444444444433 334556999999
Q ss_pred eChhHHHHHHHHhh---cCCccceEEEeccCCC
Q 028834 104 KSMGSRVSCMVACK---EDIAASAVLCLGYPLK 133 (203)
Q Consensus 104 hS~Gg~la~~~a~~---~p~~i~~lv~~~~~~~ 133 (203)
||+||.+|+++|.+ ....++-+++++++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999987 3457889999998775
No 109
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.91 E-value=9e-09 Score=86.01 Aligned_cols=92 Identities=10% Similarity=0.073 Sum_probs=70.7
Q ss_pred HHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC-
Q 028834 43 KWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI- 120 (203)
Q Consensus 43 ~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~- 120 (203)
.|..++..|. .||.+ ..|++|++...+. ........+++.+.++.+.+..+.++++|+||||||.++..++..+|+
T Consensus 109 ~~~~li~~L~~~GY~~-~~dL~g~gYDwR~-~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 109 YFHDMIEQLIKWGYKE-GKTLFGFGYDFRQ-SNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHHcCCcc-CCCcccCCCCccc-cccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 4666666654 67655 7899987544332 333456778899999999888888899999999999999999988775
Q ss_pred ---ccceEEEeccCCCCCC
Q 028834 121 ---AASAVLCLGYPLKGMN 136 (203)
Q Consensus 121 ---~i~~lv~~~~~~~~~~ 136 (203)
.|+.+|++++|+.+..
T Consensus 187 ~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 187 FEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HHhHhccEEEECCCCCCCc
Confidence 4788999999887544
No 110
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.89 E-value=2.1e-08 Score=76.28 Aligned_cols=89 Identities=18% Similarity=0.231 Sum_probs=52.8
Q ss_pred EEEEEcCCCCCCCchHHHHHHHHHHhcCCCeE---EEEEeccCCCCCCCCC--CCcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVE---VVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 25 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~---v~~~d~~g~g~g~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
+|||+||.+++....|. .+.+.+.. +||. +++++|-.. .+.... ........+++++.|+.+++.-+. ++
T Consensus 3 PVVlVHG~~~~~~~~w~-~~~~~l~~--~GY~~~~vya~tyg~~-~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kV 77 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWS-TLAPYLKA--AGYCDSEVYALTYGSG-NGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KV 77 (219)
T ss_dssp -EEEE--TTTTTCGGCC-HHHHHHHH--TT--CCCEEEE--S-C-CHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---E
T ss_pred CEEEECCCCcchhhCHH-HHHHHHHH--cCCCcceeEeccCCCC-CCCCcccccccchhhHHHHHHHHHHHHHhhCC-EE
Confidence 59999999986655442 45555655 7998 799998542 110000 001123446777778887777677 99
Q ss_pred EEEEeChhHHHHHHHHhhc
Q 028834 100 ILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~ 118 (203)
-|+||||||.++..+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999999998753
No 111
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.89 E-value=9.8e-09 Score=78.93 Aligned_cols=146 Identities=20% Similarity=0.192 Sum_probs=95.0
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC---CC--------------C-c----HHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK---AP--------------P-K----AEK 78 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~---~~--------------~-~----~~~ 78 (203)
+..|.||-.||+++..+ .|.+.+.....||.|+.+|.||.|.+... .+ + . ...
T Consensus 81 ~~~P~vV~fhGY~g~~g-----~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~ 155 (321)
T COG3458 81 GKLPAVVQFHGYGGRGG-----EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRG 155 (321)
T ss_pred CccceEEEEeeccCCCC-----CccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEee
Confidence 67899999999998875 35555554458999999999998643210 00 0 0 112
Q ss_pred HHHHHHHHHHHHHHh--CCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCcc------------------
Q 028834 79 LVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGA------------------ 138 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~--~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~------------------ 138 (203)
...|...+++.+... .+.++|.+.|.|+||.+++..+.-.| +++++++.-+.+...+..
T Consensus 156 v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~ 234 (321)
T COG3458 156 VFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAIELATEGPYDEIQTYFKR 234 (321)
T ss_pred ehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhheeecccCcHHHHHHHHHh
Confidence 333444455544433 35679999999999999999998876 788888655443321110
Q ss_pred --chh-------------hhhhccCCCEEEEEeCCCCCCChHHHHHHHH
Q 028834 139 --VRD-------------ELLLQITVPIMFVQVPFLLSLSNIIEKEFYL 172 (203)
Q Consensus 139 --~~~-------------~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~ 172 (203)
... .....++.|.++..|..|+.-++.+..+.|+
T Consensus 235 h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN 283 (321)
T COG3458 235 HDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYN 283 (321)
T ss_pred cCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhh
Confidence 000 0124578899999999998666666555554
No 112
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.89 E-value=1.2e-08 Score=93.76 Aligned_cols=104 Identities=14% Similarity=0.235 Sum_probs=63.9
Q ss_pred CccEEEEEcCCCCCCCchHHHH----HHHHHHhcCCCeEEEEEeccCCCCCCCC---CCCcHHHHHHHHHHHHHHHHHhC
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIK----WKDMLGKALDAVEVVTFDYPYIAGGKRK---APPKAEKLVEFHTDVVKGAVAKF 94 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~----~~~~~~~l~~g~~v~~~d~~g~g~g~~~---~~~~~~~~~~~~~~~i~~~~~~~ 94 (203)
..++|||+||++.+.. .|... +.+.+.+ +||.|+++|+ | ..... ........+..+.+.++.+.+.
T Consensus 66 ~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~--~g~~v~~~d~-G--~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~- 138 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHR--AGLDPWVIDF-G--SPDKVEGGMERNLADHVVALSEAIDTVKDV- 138 (994)
T ss_pred CCCcEEEECCCCCCcc-ceecCCcccHHHHHHH--CCCEEEEEcC-C--CCChhHcCccCCHHHHHHHHHHHHHHHHHh-
Confidence 4578999999887653 22100 1233333 7999999995 3 22211 0112222223333333333222
Q ss_pred CCCcEEEEEeChhHHHHHHHHhh-cCCccceEEEeccCC
Q 028834 95 PGHPLILAGKSMGSRVSCMVACK-EDIAASAVLCLGYPL 132 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~-~p~~i~~lv~~~~~~ 132 (203)
..++++++||||||.+++.++.. .+++|+++|++++|.
T Consensus 139 ~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 139 TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 34689999999999999988875 456899999988774
No 113
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.88 E-value=2.7e-08 Score=80.14 Aligned_cols=166 Identities=17% Similarity=0.073 Sum_probs=90.1
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC---------------CCC--cHH----H
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK---------------APP--KAE----K 78 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~---------------~~~--~~~----~ 78 (203)
.++.|+||.+||+++... . +.+.+.....|+.|+.+|.+|.|..... ... ... .
T Consensus 80 ~~~~Pavv~~hGyg~~~~-~----~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~ 154 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSG-D----PFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRR 154 (320)
T ss_dssp SSSEEEEEEE--TT--GG-G----HHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHH
T ss_pred CCCcCEEEEecCCCCCCC-C----cccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHH
Confidence 456799999999998752 2 2222222237999999999997611100 001 111 2
Q ss_pred HHHHHHHHHHHHHHh--CCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCC--------C--Cc------cc-
Q 028834 79 LVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKG--------M--NG------AV- 139 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~--~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~--------~--~~------~~- 139 (203)
.+.|....++.+... .+.++|.+.|.|+||.+++.+|.-.+ +|++++...+.+.. . .. ..
T Consensus 155 ~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~ 233 (320)
T PF05448_consen 155 VYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFR 233 (320)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhhhcCCccccHHHHHHHHh
Confidence 334555555555543 35679999999999999999999876 69998877654421 0 00 00
Q ss_pred -------hhh-------------hhhccCCCEEEEEeCCCCCCChHHHHHHHH-HHHHHhhhcccCCCCCCch
Q 028834 140 -------RDE-------------LLLQITVPIMFVQVPFLLSLSNIIEKEFYL-LVMVLKLSKLSDLWSPSPI 191 (203)
Q Consensus 140 -------~~~-------------~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~ 191 (203)
+.. -...+++|.++..|-.|+.-++....+.|. +....++...+..-|..+-
T Consensus 234 ~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~ 306 (320)
T PF05448_consen 234 WRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP 306 (320)
T ss_dssp HHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH
T ss_pred ccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh
Confidence 000 124678999999999999666666555554 4444444444455554433
No 114
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.88 E-value=3e-08 Score=79.99 Aligned_cols=109 Identities=20% Similarity=0.173 Sum_probs=73.3
Q ss_pred CCccEEEEEcCCCCCCCchH---HHHHHHHH-HhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHH--HHHHhC
Q 028834 21 SSSPVVVFAHGAGAPSSSDW---MIKWKDML-GKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVK--GAVAKF 94 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~---~~~~~~~~-~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~--~~~~~~ 94 (203)
...|+||++||+|+..++.. ...++..+ .. .+..|+++|||- ......+...+...+.+.-..+ ++....
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~--~~~vvvSVdYRL--APEh~~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE--LNCVVVSVDYRL--APEHPFPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHH--cCeEEEecCccc--CCCCCCCccchHHHHHHHHHHHhHHHHhCC
Confidence 56899999999888776422 12233332 33 799999999997 4444444444444433333333 222234
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhc------CCccceEEEeccCCC
Q 028834 95 PGHPLILAGKSMGSRVSCMVACKE------DIAASAVLCLGYPLK 133 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~~------p~~i~~lv~~~~~~~ 133 (203)
+.++++|+|-|.||.+|..++.+. +.+++|.|++-|.+.
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 677899999999999999888761 468999999987654
No 115
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.86 E-value=1.9e-08 Score=77.13 Aligned_cols=103 Identities=19% Similarity=0.254 Sum_probs=74.0
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC---
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--- 94 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~--- 94 (203)
..+.-|+|+|+||+.-.. + .|.+++..+. +||.|+++++... . ..+....+++.+++++|+.+.+
T Consensus 42 ~~G~yPVilF~HG~~l~n-s----~Ys~lL~HIASHGfIVVAPQl~~~-~-----~p~~~~Ei~~aa~V~~WL~~gL~~~ 110 (307)
T PF07224_consen 42 EAGTYPVILFLHGFNLYN-S----FYSQLLAHIASHGFIVVAPQLYTL-F-----PPDGQDEIKSAASVINWLPEGLQHV 110 (307)
T ss_pred cCCCccEEEEeechhhhh-H----HHHHHHHHHhhcCeEEEechhhcc-c-----CCCchHHHHHHHHHHHHHHhhhhhh
Confidence 345679999999987654 2 3555555554 8999999998752 1 1233456667777777766542
Q ss_pred -------CCCcEEEEEeChhHHHHHHHHhhcC--CccceEEEeccCC
Q 028834 95 -------PGHPLILAGKSMGSRVSCMVACKED--IAASAVLCLGYPL 132 (203)
Q Consensus 95 -------~~~~i~l~GhS~Gg~la~~~a~~~p--~~i~~lv~~~~~~ 132 (203)
+..+..++|||.||-.|+.+|..+- -.+.++|-+++..
T Consensus 111 Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 111 LPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred CCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 3358999999999999999998752 3688999888654
No 116
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.86 E-value=2.5e-08 Score=76.20 Aligned_cols=113 Identities=15% Similarity=0.137 Sum_probs=63.9
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCC--Cc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG--HP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~ 98 (203)
++..+|||+||++++. .++ ..+...+......+.-..+.+.+................+.+.+.+...++.... .+
T Consensus 2 ~~~hLvV~vHGL~G~~-~d~-~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNP-ADM-RYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCCEEEEEeCCCCCCH-HHH-HHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 4567899999999884 444 2444444442111111111111110111112334455666777677666665543 48
Q ss_pred EEEEEeChhHHHHHHHHhh---cC----C-----ccceEEEeccCCCCC
Q 028834 99 LILAGKSMGSRVSCMVACK---ED----I-----AASAVLCLGYPLKGM 135 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~---~p----~-----~i~~lv~~~~~~~~~ 135 (203)
|+++||||||.++-.+... .+ . .....+++++|..+.
T Consensus 80 IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~ 128 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGS 128 (217)
T ss_pred ceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCC
Confidence 9999999999999876664 21 1 344556778877643
No 117
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.85 E-value=5e-07 Score=72.60 Aligned_cols=137 Identities=13% Similarity=0.161 Sum_probs=91.0
Q ss_pred CCCccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEeccCCC----------------CCCCCCCC--------
Q 028834 20 TSSSPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYPYIA----------------GGKRKAPP-------- 74 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~g~g----------------~g~~~~~~-------- 74 (203)
...+.+||++||.+.+.++ ..+...++.+.. .|+.++++..|.-- .+......
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~--~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~ 161 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPD--HGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPA 161 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhh--cCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccc
Confidence 4557889999999988765 334445555555 89999999888611 00000000
Q ss_pred ------cHHHHHHHHHHHHHHHH---HhCCCCcEEEEEeChhHHHHHHHHhhcCC-ccceEEEeccCCCCCCc-cchhhh
Q 028834 75 ------KAEKLVEFHTDVVKGAV---AKFPGHPLILAGKSMGSRVSCMVACKEDI-AASAVLCLGYPLKGMNG-AVRDEL 143 (203)
Q Consensus 75 ------~~~~~~~~~~~~i~~~~---~~~~~~~i~l~GhS~Gg~la~~~a~~~p~-~i~~lv~~~~~~~~~~~-~~~~~~ 143 (203)
........+.+.+..++ ...+..+|+|+||+.|+.++..+..+.+. .+.++|++++..+.... ....+.
T Consensus 162 ~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~~~ 241 (310)
T PF12048_consen 162 SAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALAEQ 241 (310)
T ss_pred cccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHHHH
Confidence 01112223333333333 33456679999999999999999998654 58999999988764333 444556
Q ss_pred hhccCCCEEEEEeCC
Q 028834 144 LLQITVPIMFVQVPF 158 (203)
Q Consensus 144 ~~~~~~P~l~~~g~~ 158 (203)
+..++.|++-++..+
T Consensus 242 la~l~iPvLDi~~~~ 256 (310)
T PF12048_consen 242 LAQLKIPVLDIYSAD 256 (310)
T ss_pred hhccCCCEEEEecCC
Confidence 778999999999876
No 118
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.83 E-value=1e-08 Score=82.24 Aligned_cols=108 Identities=13% Similarity=0.131 Sum_probs=80.3
Q ss_pred CccEEEEEcCCCCCCCch---------HHHHHHHHH---HhcC-CCeEEEEEeccCCCCCCCCCCC----------c-HH
Q 028834 22 SSPVVVFAHGAGAPSSSD---------WMIKWKDML---GKAL-DAVEVVTFDYPYIAGGKRKAPP----------K-AE 77 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~---------~~~~~~~~~---~~l~-~g~~v~~~d~~g~g~g~~~~~~----------~-~~ 77 (203)
...+|+++||+.++.+.. | |..++ +.+. ..|-|+++|..|.+.|++.+.. + ..
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GW---W~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~ 126 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGW---WDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPV 126 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCcc---HHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCc
Confidence 356899999998865431 3 44444 2233 6799999999996545443221 1 22
Q ss_pred HHHHHHHHHHHHHHHhCCCCcEE-EEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 78 KLVEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~i~-l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
..++|+.+.-+.++++++.+++. ++|-||||+-++.++..+|++++.+|.++...
T Consensus 127 ~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~ 182 (368)
T COG2021 127 ITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAA 182 (368)
T ss_pred ccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccc
Confidence 46667777778888999999875 99999999999999999999999999887643
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.83 E-value=7.9e-08 Score=74.87 Aligned_cols=112 Identities=20% Similarity=0.192 Sum_probs=67.1
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHH-hcC--CCeEEEEEeccCC----C--CCC-CCC---------C-CcHHHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLG-KAL--DAVEVVTFDYPYI----A--GGK-RKA---------P-PKAEKLVE 81 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~-~l~--~g~~v~~~d~~g~----g--~g~-~~~---------~-~~~~~~~~ 81 (203)
...+.||+||++++..+. ..+...+. .-. +..-++-++--|. | ... ..+ . .......+
T Consensus 10 ~~tPTifihG~~gt~~s~--~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSF--NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGCCCC--HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCChhHH--HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 446699999999987542 23444443 211 2233344433331 1 011 111 1 23445667
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcC-----CccceEEEeccCCCCC
Q 028834 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED-----IAASAVLCLGYPLKGM 135 (203)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p-----~~i~~lv~~~~~~~~~ 135 (203)
.+..++.++.+.++.+++.++||||||..++.++..+. ..+..+|+|++|+.+.
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 78888888989999999999999999999999988732 2689999999999743
No 120
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.83 E-value=4.3e-08 Score=77.39 Aligned_cols=113 Identities=13% Similarity=0.046 Sum_probs=77.6
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHH--HH------HHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKW--KD------MLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGA 90 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~--~~------~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~ 90 (203)
..++.|+||..|+++........... .. .+.+ +||.|+.+|.||+|.+............+|..++|+++
T Consensus 16 ~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~--~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~ 93 (272)
T PF02129_consen 16 GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAE--RGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWI 93 (272)
T ss_dssp TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHH--TT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHH
T ss_pred CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHh--CCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHH
Confidence 45678999999999865321110000 00 1333 89999999999986544433332667889999999999
Q ss_pred HHhC-CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 91 VAKF-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 91 ~~~~-~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
.++- ...+|.++|.|.+|..++..|...|..+++++...+...
T Consensus 94 ~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 94 AAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred HhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 8872 224899999999999999999988889999998765443
No 121
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.79 E-value=1.1e-07 Score=75.00 Aligned_cols=106 Identities=9% Similarity=0.057 Sum_probs=70.4
Q ss_pred CccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC----CC
Q 028834 22 SSPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF----PG 96 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~----~~ 96 (203)
.+.+|||+-|.+....+ +|....++.+.. .+|.++.+.+... -......+.....+++.+.+++++... +.
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~--~~wsl~q~~LsSS--y~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEE--TGWSLFQVQLSSS--YSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT---TT-EEEEE--GGG--BTTS-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhcc--CCeEEEEEEecCc--cCCcCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 56689999998887655 665555555544 6999999987752 111234567788999999999999884 45
Q ss_pred CcEEEEEeChhHHHHHHHHhhc-----CCccceEEEeccC
Q 028834 97 HPLILAGKSMGSRVSCMVACKE-----DIAASAVLCLGYP 131 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~-----p~~i~~lv~~~~~ 131 (203)
++|+|+|||.|+.-+++|+.+. ...|.|+|+-++.
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 7899999999999999999874 2579999988763
No 122
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.75 E-value=3.2e-07 Score=73.46 Aligned_cols=111 Identities=14% Similarity=0.111 Sum_probs=78.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC--CCCCcHHHHHHHHHHHHHHHHHhCCCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKR--KAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
..+.+++|+||+..+- .+-.+...++..........+.+.||..|.=.. ....+..+...++...++.+......++
T Consensus 114 ~~k~vlvFvHGfNntf-~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTF-EDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCch-hHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 5678999999987653 333445667676655677888999997531000 0112233566788888888888777789
Q ss_pred EEEEEeChhHHHHHHHHhh--------cCCccceEEEeccCC
Q 028834 99 LILAGKSMGSRVSCMVACK--------EDIAASAVLCLGYPL 132 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~--------~p~~i~~lv~~~~~~ 132 (203)
|.|++||||..++.+...+ .+.+|+.+|+-++-.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999999998876 234688888776644
No 123
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.72 E-value=7.9e-08 Score=81.82 Aligned_cols=106 Identities=11% Similarity=0.077 Sum_probs=77.9
Q ss_pred CCccEEEEEcCCCCCCCchHH------HHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC
Q 028834 21 SSSPVVVFAHGAGAPSSSDWM------IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF 94 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~------~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (203)
..+.+||+++...... |+ +.+.+.+.+ +|+.|+.+|++.- +........+..++.+.+.++.+.+..
T Consensus 213 v~~~PLLIVPp~INK~---YIlDL~P~~SlVr~lv~--qG~~VflIsW~nP--~~~~r~~~ldDYv~~i~~Ald~V~~~t 285 (560)
T TIGR01839 213 QHARPLLVVPPQINKF---YIFDLSPEKSFVQYCLK--NQLQVFIISWRNP--DKAHREWGLSTYVDALKEAVDAVRAIT 285 (560)
T ss_pred cCCCcEEEechhhhhh---heeecCCcchHHHHHHH--cCCeEEEEeCCCC--ChhhcCCCHHHHHHHHHHHHHHHHHhc
Confidence 3456799999976322 21 234455544 8999999999863 222223344555678888888888887
Q ss_pred CCCcEEEEEeChhHHHHHH----HHhhcCC-ccceEEEeccCCC
Q 028834 95 PGHPLILAGKSMGSRVSCM----VACKEDI-AASAVLCLGYPLK 133 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~----~a~~~p~-~i~~lv~~~~~~~ 133 (203)
+.++|.++||||||.++.. +++.+++ +|+.++++.+++.
T Consensus 286 G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 286 GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 8889999999999999996 7777775 7999999998876
No 124
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.72 E-value=7.3e-08 Score=71.37 Aligned_cols=135 Identities=14% Similarity=0.089 Sum_probs=88.2
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-CCCc
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHP 98 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 98 (203)
....+++||+||..+..+.-- ......-..+..||+|.+++|-.. .. .....+.+.+...-++..++.. +.+.
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk-~clsiv~~a~~~gY~vasvgY~l~--~q---~htL~qt~~~~~~gv~filk~~~n~k~ 137 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRK-MCLSIVGPAVRRGYRVASVGYNLC--PQ---VHTLEQTMTQFTHGVNFILKYTENTKV 137 (270)
T ss_pred CCCccEEEEEecchhhcCchh-cccchhhhhhhcCeEEEEeccCcC--cc---cccHHHHHHHHHHHHHHHHHhccccee
Confidence 345688999999766543200 011222222347999999998652 11 1234567777777888877776 5567
Q ss_pred EEEEEeChhHHHHHHHHhh-cCCccceEEEeccCCC-------------CCCc------cchhhhhhccCCCEEEEEeCC
Q 028834 99 LILAGKSMGSRVSCMVACK-EDIAASAVLCLGYPLK-------------GMNG------AVRDELLLQITVPIMFVQVPF 158 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~-~p~~i~~lv~~~~~~~-------------~~~~------~~~~~~~~~~~~P~l~~~g~~ 158 (203)
+.+.|||.|+.+++....+ +..+|.|++++++... +... ....+.+..++.|.+++.+++
T Consensus 138 l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~v~~~ilVv~~~~ 217 (270)
T KOG4627|consen 138 LTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTDVTVWILVVAAEH 217 (270)
T ss_pred EEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcCceeeeeEeeecc
Confidence 8999999999999977665 4559999998876432 0110 011234567788999999887
Q ss_pred CC
Q 028834 159 LL 160 (203)
Q Consensus 159 d~ 160 (203)
+-
T Consensus 218 es 219 (270)
T KOG4627|consen 218 ES 219 (270)
T ss_pred cC
Confidence 74
No 125
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.70 E-value=1.1e-07 Score=74.21 Aligned_cols=110 Identities=23% Similarity=0.288 Sum_probs=76.7
Q ss_pred CCccEEEEEcCCCCCCCchH-HHHHHHHHHhcCCCeEEEEEeccCCC-----CCCCCCCC---cHHHHHHHHHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDW-MIKWKDMLGKALDAVEVVTFDYPYIA-----GGKRKAPP---KAEKLVEFHTDVVKGAV 91 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~~l~~g~~v~~~d~~g~g-----~g~~~~~~---~~~~~~~~~~~~i~~~~ 91 (203)
+..|+||.+||.+++..... ...|.++... .||-|+.+|-.... .+....+. .....+.++.+.+..+.
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~--~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~ 136 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADR--EGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLV 136 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcc--cCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHH
Confidence 34589999999887763211 1124444444 79999999532211 11111111 12356778888888888
Q ss_pred HhCCC--CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 92 AKFPG--HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 92 ~~~~~--~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
.++.. ++|++.|.|.||.|+..++..+|+.++++..+++..
T Consensus 137 ~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 137 NEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 88754 489999999999999999999999999999888766
No 126
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.70 E-value=1.5e-06 Score=72.52 Aligned_cols=111 Identities=12% Similarity=0.044 Sum_probs=65.8
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHH-HhC----
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAV-AKF---- 94 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~-~~~---- 94 (203)
++.|+|+++||............+..+++.-. .-..++.+|........... .......+.+.+.+.-++ +.+
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el-~~~~~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQEL-PCNADFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccC-CchHHHHHHHHHHHHHHHHHhCCCCC
Confidence 45799999999654332222122333332211 23456777754211111111 222233444444433333 332
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
+.++.+|.|+||||+.|+.++.++|+.+.+++++++.+
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 34579999999999999999999999999999999765
No 127
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.66 E-value=6.5e-07 Score=71.36 Aligned_cols=137 Identities=16% Similarity=0.170 Sum_probs=89.0
Q ss_pred CCCCccEEEEEcCCCCCCCchHH-----HHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWM-----IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~-----~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (203)
+.++..-+++.-|.+.......+ ..|.+.... .+..|+.++|||.|.+ ..........++..+.++++++.
T Consensus 133 ~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~--~~aNvl~fNYpGVg~S--~G~~s~~dLv~~~~a~v~yL~d~ 208 (365)
T PF05677_consen 133 EAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE--LGANVLVFNYPGVGSS--TGPPSRKDLVKDYQACVRYLRDE 208 (365)
T ss_pred CCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH--cCCcEEEECCCccccC--CCCCCHHHHHHHHHHHHHHHHhc
Confidence 44455679999998766533111 134454444 7999999999996443 34445678889999999999875
Q ss_pred C---CCCcEEEEEeChhHHHHHHHHhhcC----CccceEEEeccCCCCCC--------------------ccchhhhhhc
Q 028834 94 F---PGHPLILAGKSMGSRVSCMVACKED----IAASAVLCLGYPLKGMN--------------------GAVRDELLLQ 146 (203)
Q Consensus 94 ~---~~~~i~l~GhS~Gg~la~~~a~~~p----~~i~~lv~~~~~~~~~~--------------------~~~~~~~~~~ 146 (203)
. +.++|++.|||+||.++.+.+.++. +.++=+++-+-.+.... ..........
T Consensus 209 ~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~~~l~~l~gWnidS~K~s~~ 288 (365)
T PF05677_consen 209 EQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFFGPIGKLLIKLLGWNIDSAKNSEK 288 (365)
T ss_pred ccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHHHHHHHHHHHHHhccCCCchhhhcc
Confidence 4 3468999999999999998777642 33554554443222100 0011223456
Q ss_pred cCCCEEEEEeCCC
Q 028834 147 ITVPIMFVQVPFL 159 (203)
Q Consensus 147 ~~~P~l~~~g~~d 159 (203)
+.+|.+++++.+-
T Consensus 289 l~cpeIii~~~d~ 301 (365)
T PF05677_consen 289 LQCPEIIIYGVDS 301 (365)
T ss_pred CCCCeEEEecccc
Confidence 7899999997743
No 128
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.64 E-value=4.4e-07 Score=85.68 Aligned_cols=98 Identities=13% Similarity=0.119 Sum_probs=70.4
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-CCCcEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHPLIL 101 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~i~l 101 (203)
.++++++||++++.. .|......+..++.|+.++.||++.. .... ..++++++.+...+... ...++++
T Consensus 1068 ~~~l~~lh~~~g~~~-----~~~~l~~~l~~~~~v~~~~~~g~~~~-~~~~----~~l~~la~~~~~~i~~~~~~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW-----QFSVLSRYLDPQWSIYGIQSPRPDGP-MQTA----TSLDEVCEAHLATLLEQQPHGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchH-----HHHHHHHhcCCCCcEEEEECCCCCCC-CCCC----CCHHHHHHHHHHHHHhhCCCCCEEE
Confidence 467999999998752 46677777667899999999996422 1122 23344444444444333 3458999
Q ss_pred EEeChhHHHHHHHHhh---cCCccceEEEecc
Q 028834 102 AGKSMGSRVSCMVACK---EDIAASAVLCLGY 130 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~---~p~~i~~lv~~~~ 130 (203)
+||||||.++.++|.+ .+.++..++++++
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 9999999999999986 5778999998875
No 129
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.61 E-value=1.7e-07 Score=79.99 Aligned_cols=110 Identities=15% Similarity=0.120 Sum_probs=68.0
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCC-CeEEEEEecc-CC-CCCCC-CCCCcHHHHHHHHHHHHHHHHHh---
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALD-AVEVVTFDYP-YI-AGGKR-KAPPKAEKLVEFHTDVVKGAVAK--- 93 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~-g~~v~~~d~~-g~-g~g~~-~~~~~~~~~~~~~~~~i~~~~~~--- 93 (203)
++.|++|++||.+...++........+... . ++.|++++|| |. |.... ........-+.|...+++++.++
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~--~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLARE--GDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhc--CCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 467999999997655443221122333333 3 4999999999 31 11111 01111123345666666655543
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHhh--cCCccceEEEeccCC
Q 028834 94 F--PGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGYPL 132 (203)
Q Consensus 94 ~--~~~~i~l~GhS~Gg~la~~~a~~--~p~~i~~lv~~~~~~ 132 (203)
+ +.++|+|+|+|.||.++..++.. .+..++++|++++..
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 4 45689999999999999988876 344688888887654
No 130
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.59 E-value=2.5e-07 Score=72.45 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=73.9
Q ss_pred CCccEEEEEcCCCCCCCchHHHHH-HHHHHhcCCCeEEEEEeccCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHhCCCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKW-KDMLGKALDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~-~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
+++|++|-.|..|-+-.+.|..-+ .+....+.+.+.++-+|.||+..|....+.+ ....++++++.+...++.++.+.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~ 100 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKS 100 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccE
Confidence 469999999999865422121000 1223445589999999999988777655555 34588899999999999999999
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
++-+|--.||.+-.++|.++|+++.|+|++++.
T Consensus 101 vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~ 133 (283)
T PF03096_consen 101 VIGFGVGAGANILARFALKHPERVLGLILVNPT 133 (283)
T ss_dssp EEEEEETHHHHHHHHHHHHSGGGEEEEEEES--
T ss_pred EEEEeeccchhhhhhccccCccceeEEEEEecC
Confidence 999999999999999999999999999999864
No 131
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.58 E-value=2.1e-06 Score=76.73 Aligned_cols=85 Identities=13% Similarity=0.023 Sum_probs=65.2
Q ss_pred HHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC----------------CCCcEEEEEeChh
Q 028834 44 WKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF----------------PGHPLILAGKSMG 107 (203)
Q Consensus 44 ~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~----------------~~~~i~l~GhS~G 107 (203)
+.+.+.. +||.|+.+|.||++.+............++..++|+++..+. ...+|.++|.|+|
T Consensus 271 ~~~~~~~--rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 271 LNDYFLP--RGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHHh--CCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 4455544 899999999999754433333333567889999999987431 1358999999999
Q ss_pred HHHHHHHHhhcCCccceEEEecc
Q 028834 108 SRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 108 g~la~~~a~~~p~~i~~lv~~~~ 130 (203)
|.+++.+|...|..++++|..++
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCC
Confidence 99999999988889999998754
No 132
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.55 E-value=2.1e-06 Score=63.40 Aligned_cols=129 Identities=19% Similarity=0.159 Sum_probs=87.7
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (203)
..+||+.|-|+=. ++-...++.+++ +|+.|+.+|-+-+ ... ..+..+...|+.+.++...++.+.++++|+|
T Consensus 3 t~~v~~SGDgGw~--~~d~~~a~~l~~--~G~~VvGvdsl~Y-fw~---~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 3 TLAVFFSGDGGWR--DLDKQIAEALAK--QGVPVVGVDSLRY-FWS---ERTPEQTAADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred EEEEEEeCCCCch--hhhHHHHHHHHH--CCCeEEEechHHH-Hhh---hCCHHHHHHHHHHHHHHHHHHhCCceEEEEe
Confidence 4678888855432 233355666655 8999999996642 111 1234577889999999999998999999999
Q ss_pred eChhHHHHHHHHhhcC----CccceEEEeccCCC-----------CCC--cc--chhhhhhccC-CCEEEEEeCCCC
Q 028834 104 KSMGSRVSCMVACKED----IAASAVLCLGYPLK-----------GMN--GA--VRDELLLQIT-VPIMFVQVPFLL 160 (203)
Q Consensus 104 hS~Gg~la~~~a~~~p----~~i~~lv~~~~~~~-----------~~~--~~--~~~~~~~~~~-~P~l~~~g~~d~ 160 (203)
+|+|+-+......+.| .+|+.++++++... +.. .. ....++.++. .|++-++|+++.
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~ 151 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDED 151 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCC
Confidence 9999988888877754 48999999886432 111 11 1222333443 477888988775
No 133
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.54 E-value=6.8e-07 Score=69.65 Aligned_cols=111 Identities=14% Similarity=0.149 Sum_probs=87.4
Q ss_pred CCccEEEEEcCCCCCCCchHHHHH-HHHHHhcCCCeEEEEEeccCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHhCCCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKW-KDMLGKALDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~-~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
+++|++|-.|..|-+..+.|..-+ .+-..++...+.++-+|.||+..|....+.+ ....++++++.+..+++.++.+.
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~ 123 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKS 123 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcce
Confidence 368999999999877544332111 1222344456999999999988776555555 23588899999999999999999
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
++-+|--.|+.+-.++|..+|++|-|+|++...
T Consensus 124 vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 124 VIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred EEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 999999999999999999999999999999753
No 134
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.54 E-value=3.9e-07 Score=74.07 Aligned_cols=104 Identities=21% Similarity=0.159 Sum_probs=73.9
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeE---EEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVE---VVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~---v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
+-+++++||++.... .+. .+...+.. .++. ++.+++++. . ...+.....+.+.+.++......+.+++
T Consensus 59 ~~pivlVhG~~~~~~-~~~-~~~~~~~~--~g~~~~~~~~~~~~~~---~--~~~~~~~~~~ql~~~V~~~l~~~ga~~v 129 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFL-PLDYRLAI--LGWLTNGVYAFELSGG---D--GTYSLAVRGEQLFAYVDEVLAKTGAKKV 129 (336)
T ss_pred CceEEEEccCcCCcc-hhh-hhhhhhcc--hHHHhccccccccccc---C--CCccccccHHHHHHHHHHHHhhcCCCce
Confidence 446999999865542 221 22222333 4555 888888752 1 2233345666777777777777777899
Q ss_pred EEEEeChhHHHHHHHHhhcC--CccceEEEeccCCCCC
Q 028834 100 ILAGKSMGSRVSCMVACKED--IAASAVLCLGYPLKGM 135 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p--~~i~~lv~~~~~~~~~ 135 (203)
.|+||||||.++.+++...+ ..|+.++.+++|-.+.
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999999999999877 8999999999887643
No 135
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.53 E-value=5e-07 Score=57.71 Aligned_cols=62 Identities=19% Similarity=0.257 Sum_probs=41.6
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCC--CCCCCcHHHHHHHHHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGK--RKAPPKAEKLVEFHTDVV 87 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~--~~~~~~~~~~~~~~~~~i 87 (203)
.+.+|+++||++.... ....++..++. +||.|+++|++|+|.+. +....++...++|+.+.+
T Consensus 15 ~k~~v~i~HG~~eh~~--ry~~~a~~L~~--~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSG--RYAHLAEFLAE--QGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHHHHH--HHHHHHHHHHh--CCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 6899999999987753 23355555555 89999999999976433 222344555555555443
No 136
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.53 E-value=3.9e-07 Score=70.82 Aligned_cols=53 Identities=21% Similarity=0.198 Sum_probs=39.9
Q ss_pred HHHHHHHH-HHHHHHhCCC--CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 79 LVEFHTDV-VKGAVAKFPG--HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 79 ~~~~~~~~-i~~~~~~~~~--~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
..+.+.+. +..+.+++.. .+..|+|+||||..|+.++.++|+.+.+++++++.
T Consensus 94 ~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 94 YETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 33444433 4444444532 23899999999999999999999999999999965
No 137
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.50 E-value=3.2e-06 Score=68.90 Aligned_cols=110 Identities=17% Similarity=0.181 Sum_probs=74.5
Q ss_pred CccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 22 SSPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
..|+||++||+|..... +....+...+..+-....++..||.-.. +..........+.++.+..+++.+..+..+|+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~--~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTS--SDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccc--cccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 46999999998876643 3222233333333346689999998632 11112334467777888888888666778999
Q ss_pred EEEeChhHHHHHHHHhh-----cCCccceEEEeccCCC
Q 028834 101 LAGKSMGSRVSCMVACK-----EDIAASAVLCLGYPLK 133 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~-----~p~~i~~lv~~~~~~~ 133 (203)
|+|-|.||.+++.+... .....+++|+++|-..
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVN 236 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcC
Confidence 99999999999977654 1124688999997554
No 138
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.48 E-value=3.5e-07 Score=72.78 Aligned_cols=100 Identities=19% Similarity=0.143 Sum_probs=68.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC--CCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--PGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~ 98 (203)
+.+..|||+-|..+--... .+..- +..||.|+..+.||++ |+...+- .......+..+++..++.+ ..+.
T Consensus 241 ngq~LvIC~EGNAGFYEvG---~m~tP---~~lgYsvLGwNhPGFa-gSTG~P~-p~n~~nA~DaVvQfAI~~Lgf~~ed 312 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEVG---VMNTP---AQLGYSVLGWNHPGFA-GSTGLPY-PVNTLNAADAVVQFAIQVLGFRQED 312 (517)
T ss_pred CCceEEEEecCCccceEee---eecCh---HHhCceeeccCCCCcc-ccCCCCC-cccchHHHHHHHHHHHHHcCCCccc
Confidence 3467899999976643211 12222 2269999999999984 4432222 2234445555666666665 4568
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEEec
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~ 129 (203)
|+|.|||.||..++..|+.+|+ ++++|+-+
T Consensus 313 IilygWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 313 IILYGWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred eEEEEeecCCchHHHHhhcCCC-ceEEEeec
Confidence 9999999999999999999995 99998543
No 139
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.45 E-value=9e-07 Score=75.99 Aligned_cols=108 Identities=18% Similarity=0.123 Sum_probs=64.5
Q ss_pred CccEEEEEcCCCCCCCch--HHHHHHHHHHhcCCCeEEEEEeccC----CCCCCCCCCCc-HHHHHHHHHHHHHHHHHh-
Q 028834 22 SSPVVVFAHGAGAPSSSD--WMIKWKDMLGKALDAVEVVTFDYPY----IAGGKRKAPPK-AEKLVEFHTDVVKGAVAK- 93 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~--~~~~~~~~~~~l~~g~~v~~~d~~g----~g~g~~~~~~~-~~~~~~~~~~~i~~~~~~- 93 (203)
+.|++|++||.+...++. ....-...+.. ++..|+.++||- +-.... .... .-.-+.|...+++++.++
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~--~~vivVt~nYRlg~~Gfl~~~~-~~~~~gN~Gl~Dq~~AL~WV~~nI 200 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAAS--KDVIVVTINYRLGAFGFLSLGD-LDAPSGNYGLLDQRLALKWVQDNI 200 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHH--HTSEEEEE----HHHHH-BSSS-TTSHBSTHHHHHHHHHHHHHHHHG
T ss_pred ccceEEEeecccccCCCcccccccccccccC--CCEEEEEecccccccccccccc-cccCchhhhhhhhHHHHHHHHhhh
Confidence 579999999977665543 11123344444 799999999993 211111 1111 224555666666666544
Q ss_pred --CCC--CcEEEEEeChhHHHHHHHHhhc--CCccceEEEeccCC
Q 028834 94 --FPG--HPLILAGKSMGSRVSCMVACKE--DIAASAVLCLGYPL 132 (203)
Q Consensus 94 --~~~--~~i~l~GhS~Gg~la~~~a~~~--p~~i~~lv~~~~~~ 132 (203)
+++ ++|.|+|||.||..+...+... ...++++|+.++..
T Consensus 201 ~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 201 AAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 554 4799999999999998877762 35899999999743
No 140
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.42 E-value=2e-06 Score=64.65 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=84.0
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC-CCC----------CcHHHHHHHHHHHHHHHH
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKR-KAP----------PKAEKLVEFHTDVVKGAV 91 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~-~~~----------~~~~~~~~~~~~~i~~~~ 91 (203)
+.+||.+--..+..... .+..++.++. .||.|+.+|+.. |..-+ ... .+.....+++...++++.
T Consensus 39 ~~~li~i~DvfG~~~~n-~r~~Adk~A~--~Gy~v~vPD~~~-Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk 114 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFPN-TREGADKVAL--NGYTVLVPDFFR-GDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLK 114 (242)
T ss_pred CeEEEEEEeeeccccHH-HHHHHHHHhc--CCcEEEcchhhc-CCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHH
Confidence 34566666544433221 2345555544 899999999874 11111 000 112234456677777777
Q ss_pred HhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCC
Q 028834 92 AKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLS 161 (203)
Q Consensus 92 ~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~ 161 (203)
.+....+|.++|++|||.++..+....| .+.++++.-+.+.. .+....+++|++++.+++|..
T Consensus 115 ~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d------~~D~~~vk~Pilfl~ae~D~~ 177 (242)
T KOG3043|consen 115 NHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD------SADIANVKAPILFLFAELDED 177 (242)
T ss_pred HcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC------hhHHhcCCCCEEEEeeccccc
Confidence 6666779999999999999999999887 67777766555433 233567889999999999984
No 141
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.42 E-value=1.5e-06 Score=70.60 Aligned_cols=108 Identities=18% Similarity=0.128 Sum_probs=54.9
Q ss_pred CCCccEEEEEcCCCCCCCc----------------hHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC-Cc---HH-H
Q 028834 20 TSSSPVVVFAHGAGAPSSS----------------DWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP-PK---AE-K 78 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~----------------~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~-~~---~~-~ 78 (203)
.++.|.||++||-|+.... .....+...+.+ +||.|+++|.+|.|....... .. .. +
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk--~GYVvla~D~~g~GER~~~e~~~~~~~~~~~ 189 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAK--RGYVVLAPDALGFGERGDMEGAAQGSNYDCQ 189 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHT--TTSEEEEE--TTSGGG-SSCCCTTTTS--HH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHh--CCCEEEEEccccccccccccccccccchhHH
Confidence 4667999999996654310 001123444444 899999999999763221110 00 00 0
Q ss_pred HH----------------HHHHHHHHHHHHh--CCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 79 LV----------------EFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 79 ~~----------------~~~~~~i~~~~~~--~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
.+ -+....++.+... .+.++|.++||||||..+..++... ++|++.|..+.
T Consensus 190 ~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 190 ALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 11 0112223322221 2556899999999999999999986 47888886654
No 142
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.41 E-value=5e-06 Score=66.86 Aligned_cols=104 Identities=20% Similarity=0.321 Sum_probs=71.5
Q ss_pred CCccEEEEEcCCCCCCCchHH-HHH-HHHHHhcCCCeEEEEEeccCCCCCCCCCCCc--------------HHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWM-IKW-KDMLGKALDAVEVVTFDYPYIAGGKRKAPPK--------------AEKLVEFHT 84 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~-~~~-~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~--------------~~~~~~~~~ 84 (203)
+.+|++|.++|.|... .|. ..+ +.-+. ..|+..+.+..|++| .+++... ....+.+.+
T Consensus 90 ~~rp~~IhLagTGDh~--f~rR~~l~a~pLl--~~gi~s~~le~Pyyg--~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~ 163 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG--FWRRRRLMARPLL--KEGIASLILENPYYG--QRKPKDQRRSSLRNVSDLFVMGRATILESR 163 (348)
T ss_pred CCCceEEEecCCCccc--hhhhhhhhhhHHH--HcCcceEEEeccccc--ccChhHhhcccccchhHHHHHHhHHHHHHH
Confidence 4689999999988754 221 111 22232 269999999999954 3333221 122344555
Q ss_pred HHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 85 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 85 ~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
..+.++.++ +-.++.+.|.||||.+|...+...|..+..+-++++.
T Consensus 164 ~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 164 ALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred HHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 556666666 7779999999999999999999999888877777643
No 143
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=2.8e-06 Score=75.84 Aligned_cols=149 Identities=12% Similarity=0.081 Sum_probs=92.1
Q ss_pred CCCCccEEEEEcCCCCCCC--chHHHHHHHHHHhcCCCeEEEEEeccCCC-CCCCC---CC-CcHHHHHHHHHHHHHHHH
Q 028834 19 DTSSSPVVVFAHGAGAPSS--SDWMIKWKDMLGKALDAVEVVTFDYPYIA-GGKRK---AP-PKAEKLVEFHTDVVKGAV 91 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~~l~~g~~v~~~d~~g~g-~g~~~---~~-~~~~~~~~~~~~~i~~~~ 91 (203)
..++-|++|.+||..++.. +-+...|...+. ...|+.|+.+|.||.| .|... .. .-.....+|....++.++
T Consensus 522 ~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~-s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~ 600 (755)
T KOG2100|consen 522 PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVV-SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVL 600 (755)
T ss_pred CCCCCCEEEEecCCCCcceeeeeEEecHHHHhh-ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHH
Confidence 3456788999999876221 122234555431 1279999999999853 11110 00 112245667777777777
Q ss_pred HhC--CCCcEEEEEeChhHHHHHHHHhhcC-CccceEEEeccCCCC-------------CCcc--------chhhhhhcc
Q 028834 92 AKF--PGHPLILAGKSMGSRVSCMVACKED-IAASAVLCLGYPLKG-------------MNGA--------VRDELLLQI 147 (203)
Q Consensus 92 ~~~--~~~~i~l~GhS~Gg~la~~~a~~~p-~~i~~lv~~~~~~~~-------------~~~~--------~~~~~~~~~ 147 (203)
+.. +.++|.|+|+|.||.+++.++...+ .-+++.++++|...- .+.. ........+
T Consensus 601 ~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~ 680 (755)
T KOG2100|consen 601 KLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNI 680 (755)
T ss_pred hcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhh
Confidence 664 5668999999999999999999987 455555888765430 0000 001123345
Q ss_pred CCCE-EEEEeCCCCCCChHHHH
Q 028834 148 TVPI-MFVQVPFLLSLSNIIEK 168 (203)
Q Consensus 148 ~~P~-l~~~g~~d~~~~~~~~~ 168 (203)
+.|. +++||+.|..+......
T Consensus 681 ~~~~~LliHGt~DdnVh~q~s~ 702 (755)
T KOG2100|consen 681 KTPKLLLIHGTEDDNVHFQQSA 702 (755)
T ss_pred ccCCEEEEEcCCcCCcCHHHHH
Confidence 5565 99999999866544433
No 144
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.39 E-value=3.3e-06 Score=64.61 Aligned_cols=104 Identities=16% Similarity=0.191 Sum_probs=69.6
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcC------CCeEEEEEeccCCC--CC--CC------------CCCCcHHHHHH
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKAL------DAVEVVTFDYPYIA--GG--KR------------KAPPKAEKLVE 81 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~------~g~~v~~~d~~g~g--~g--~~------------~~~~~~~~~~~ 81 (203)
-+.||+||++|...+ +..++..+. ...-+..+|--|.- .| +. ...........
T Consensus 46 iPTIfIhGsgG~asS-----~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~ 120 (288)
T COG4814 46 IPTIFIHGSGGTASS-----LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSK 120 (288)
T ss_pred cceEEEecCCCChhH-----HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHH
Confidence 458999999998854 333333332 22345555544411 00 00 00112223455
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc------CCccceEEEeccCCC
Q 028834 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE------DIAASAVLCLGYPLK 133 (203)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~------p~~i~~lv~~~~~~~ 133 (203)
-+..++.++.++++..++..+||||||.-...++..+ | .+..+|.+++|+.
T Consensus 121 wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P-~lnK~V~l~gpfN 177 (288)
T COG4814 121 WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLP-PLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCc-chhheEEeccccc
Confidence 6677888888999999999999999999999999873 4 6999999999987
No 145
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.30 E-value=1.7e-05 Score=62.90 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=67.9
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGK-RKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
.++|+.||+|.+-.++-+..+.+++..+ .|..+.++.. | .+. .....+....++.+-+.+.. ...+. +-+.++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~-~g~~~~~i~i-g--~~~~~s~~~~~~~Qve~vce~l~~-~~~l~-~G~naI 99 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNL-SGSPGFCLEI-G--NGVGDSWLMPLTQQAEIACEKVKQ-MKELS-QGYNIV 99 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhC-CCCceEEEEE-C--CCccccceeCHHHHHHHHHHHHhh-chhhh-CcEEEE
Confidence 3499999999887666677788888553 4555555543 2 221 11222233333333333333 12222 249999
Q ss_pred EeChhHHHHHHHHhhcCC--ccceEEEeccCCC
Q 028834 103 GKSMGSRVSCMVACKEDI--AASAVLCLGYPLK 133 (203)
Q Consensus 103 GhS~Gg~la~~~a~~~p~--~i~~lv~~~~~~~ 133 (203)
|||+||.++-.++.+.|+ +|+.+|++++|..
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 999999999999999775 6999999998765
No 146
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.27 E-value=6e-06 Score=66.66 Aligned_cols=93 Identities=18% Similarity=0.184 Sum_probs=61.9
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC---------CCCcHHHHHHHHHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK---------APPKAEKLVEFHTDVVKGAV 91 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~---------~~~~~~~~~~~~~~~i~~~~ 91 (203)
...|+|++.||.|.... .+ ...++.++. .||.|.+++.||.-.+... .+..+.....++...++++.
T Consensus 69 ~~~PlvvlshG~Gs~~~-~f-~~~A~~lAs--~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 69 YLLPLVVLSHGSGSYVT-GF-AWLAEHLAS--YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred CcCCeEEecCCCCCCcc-ch-hhhHHHHhh--CceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 36799999999998753 22 234555555 8999999999984322211 11112344456666666655
Q ss_pred Hh---------CCCCcEEEEEeChhHHHHHHHHhh
Q 028834 92 AK---------FPGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 92 ~~---------~~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
+. ++..+|.++|||+||..+++.+..
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhccc
Confidence 54 344589999999999999977643
No 147
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.25 E-value=1.2e-05 Score=57.82 Aligned_cols=82 Identities=17% Similarity=0.190 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC----ccceEEEeccCCCCCCccchhhhhhccCCCEEEE
Q 028834 79 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI----AASAVLCLGYPLKGMNGAVRDELLLQITVPIMFV 154 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~----~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~ 154 (203)
..+.+...+......+...+|+++|||+||.+|..++..... ....++.+++|..+...................+
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i 89 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRI 89 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEE
Confidence 444555555555555577899999999999999998887543 6777888998876433221101112234455667
Q ss_pred EeCCCC
Q 028834 155 QVPFLL 160 (203)
Q Consensus 155 ~g~~d~ 160 (203)
+...|.
T Consensus 90 ~~~~D~ 95 (153)
T cd00741 90 VNDNDI 95 (153)
T ss_pred EECCCc
Confidence 777776
No 148
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.25 E-value=2.4e-05 Score=58.36 Aligned_cols=86 Identities=23% Similarity=0.367 Sum_probs=57.7
Q ss_pred HHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh---cC
Q 028834 43 KWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---ED 119 (203)
Q Consensus 43 ~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~---~p 119 (203)
.|......+...+.++.++.+|++.+.. .........+... ..+.+.....+++++|||+||.++...+.. .+
T Consensus 14 ~~~~~~~~l~~~~~v~~~~~~g~~~~~~-~~~~~~~~~~~~~---~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 14 EYARLAAALRGRRDVSALPLPGFGPGEP-LPASADALVEAQA---EAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred HHHHHHHhcCCCccEEEecCCCCCCCCC-CCCCHHHHHHHHH---HHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 5677777776789999999999743222 2223333333322 233333455689999999999999988886 35
Q ss_pred CccceEEEeccCC
Q 028834 120 IAASAVLCLGYPL 132 (203)
Q Consensus 120 ~~i~~lv~~~~~~ 132 (203)
..+.++++++...
T Consensus 90 ~~~~~l~~~~~~~ 102 (212)
T smart00824 90 IPPAAVVLLDTYP 102 (212)
T ss_pred CCCcEEEEEccCC
Confidence 5788898887543
No 149
>PLN02606 palmitoyl-protein thioesterase
Probab=98.20 E-value=4e-05 Score=60.67 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=63.9
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGK-RKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
.+||+.||+|.+-.++-+..+.+++... .+..+..+. -| .+. .....+....++.+-+.+.. ...+. +-+.++
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~-~~~pg~~v~-ig--~~~~~s~~~~~~~Qv~~vce~l~~-~~~L~-~G~naI 100 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINH-SGYPGTCVE-IG--NGVQDSLFMPLRQQASIACEKIKQ-MKELS-EGYNIV 100 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhC-CCCCeEEEE-EC--CCcccccccCHHHHHHHHHHHHhc-chhhc-CceEEE
Confidence 4599999999665555566777777532 233333333 22 222 11112222333333333333 12222 359999
Q ss_pred EeChhHHHHHHHHhhcCC--ccceEEEeccCCCC
Q 028834 103 GKSMGSRVSCMVACKEDI--AASAVLCLGYPLKG 134 (203)
Q Consensus 103 GhS~Gg~la~~~a~~~p~--~i~~lv~~~~~~~~ 134 (203)
|+|+||.+.-.++.+.|+ +|+.+|++++|..+
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 999999999999999765 69999999987653
No 150
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=6.3e-06 Score=70.47 Aligned_cols=142 Identities=15% Similarity=-0.003 Sum_probs=85.9
Q ss_pred CCCccEEEEEcCCCCCCC--chHH-HHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC----C-cHHHHHHHHHHHHHHHH
Q 028834 20 TSSSPVVVFAHGAGAPSS--SDWM-IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP----P-KAEKLVEFHTDVVKGAV 91 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~--~~~~-~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~----~-~~~~~~~~~~~~i~~~~ 91 (203)
+++-|+++++-|+.+-.- ..|- ..+-++-...+.||.|+.+|.||..+..-+.. . -..-.++|..+.++.+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~La 718 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLA 718 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHH
Confidence 456799999999654321 0110 01111111112799999999998432111111 0 11124566677777787
Q ss_pred HhC---CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC-------------CCCc--------cch---hhhh
Q 028834 92 AKF---PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK-------------GMNG--------AVR---DELL 144 (203)
Q Consensus 92 ~~~---~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~-------------~~~~--------~~~---~~~~ 144 (203)
++. +-++|.+-|||.||.+++....++|+.++.+|.=++... +.+. .+. .+.+
T Consensus 719 eq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~Vekl 798 (867)
T KOG2281|consen 719 EQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKL 798 (867)
T ss_pred HhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhC
Confidence 775 567999999999999999999999998887774333211 1110 000 1223
Q ss_pred hccCCCEEEEEeCCCCC
Q 028834 145 LQITVPIMFVQVPFLLS 161 (203)
Q Consensus 145 ~~~~~P~l~~~g~~d~~ 161 (203)
..-....+++||--|.+
T Consensus 799 pdepnRLlLvHGliDEN 815 (867)
T KOG2281|consen 799 PDEPNRLLLVHGLIDEN 815 (867)
T ss_pred CCCCceEEEEecccccc
Confidence 44456689999999973
No 151
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.20 E-value=5.8e-06 Score=64.77 Aligned_cols=106 Identities=16% Similarity=0.133 Sum_probs=54.0
Q ss_pred cEEEEEcCCCCCCCch-HHHHHHHHHHhcCCCeEEEEEeccCCCCCCCC-CCCcH-HHHHHHHHHHHHHHHHhCC--CCc
Q 028834 24 PVVVFAHGAGAPSSSD-WMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK-APPKA-EKLVEFHTDVVKGAVAKFP--GHP 98 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~-~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~-~~~~~-~~~~~~~~~~i~~~~~~~~--~~~ 98 (203)
.+||+.||+|.+-... -+......+.+.-.|..|.+++.-. +... ..... ...-+.+..++ ..++... .+-
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~---~~~~D~~~s~f~~v~~Qv~~vc-~~l~~~p~L~~G 81 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGN---DPSEDVENSFFGNVNDQVEQVC-EQLANDPELANG 81 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSS---SHHHHHHHHHHSHHHHHHHHHH-HHHHH-GGGTT-
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECC---CcchhhhhhHHHHHHHHHHHHH-HHHhhChhhhcc
Confidence 3499999999764221 3456777776655788888888642 1100 00001 11222222233 3333211 135
Q ss_pred EEEEEeChhHHHHHHHHhhcCC-ccceEEEeccCCC
Q 028834 99 LILAGKSMGSRVSCMVACKEDI-AASAVLCLGYPLK 133 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~-~i~~lv~~~~~~~ 133 (203)
+.++|||+||.+.-.++.+.++ .|+.+|++++|..
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 9999999999999999999653 7999999998764
No 152
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.18 E-value=7.2e-05 Score=56.32 Aligned_cols=68 Identities=9% Similarity=-0.033 Sum_probs=47.1
Q ss_pred EEEEeChhHHHHHHHHhh---------cCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCCCCChHHHH
Q 028834 100 ILAGKSMGSRVSCMVACK---------EDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLLSLSNIIEK 168 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~---------~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~~~~~~~~~ 168 (203)
.|+|+|+|+.++..++.. +| .++=+|++++................+++|.|.+.|+.|...+.....
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~~~~~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~ 183 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFPSKKLDESAYKRPLSTPSLHIFGETDTIVPSERSE 183 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCCcchhhhhhhccCCCCCeeEEecccceeecchHHH
Confidence 699999999999999883 22 457677777655432222222334578999999999999866655444
No 153
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.17 E-value=2.8e-06 Score=63.34 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=67.7
Q ss_pred CCCccEEEEEcCCCCCCCchHHHH--HHHHHHhcCCCeEEEEEeccCCC---CCCCC--------------CCCcHHH--
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIK--WKDMLGKALDAVEVVTFDYPYIA---GGKRK--------------APPKAEK-- 78 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~--~~~~~~~l~~g~~v~~~d~~g~g---~g~~~--------------~~~~~~~-- 78 (203)
++.-|+++++.|+.-.. ..+.+. |...... +|..|+.+|-.=+| .|..+ ...++..
T Consensus 41 ~k~~P~lf~LSGLTCT~-~Nfi~Ksg~qq~As~--hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~y 117 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTH-ENFIEKSGFQQQASK--HGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHY 117 (283)
T ss_pred CCcCceEEEecCCcccc-hhhHhhhhHHHhHhh--cCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhh
Confidence 44569999999976443 333221 3333333 89999999866544 11110 1112222
Q ss_pred -HHHHHHHHHHHHHHh----CCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 79 -LVEFHTDVVKGAVAK----FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 79 -~~~~~~~~i~~~~~~----~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
+.+.+.+.+-+++.. ++..++.|+||||||.-|+..+.+.|.+.+.+-.+++-.
T Consensus 118 rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 118 RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 333333333333331 244579999999999999999999999998888776543
No 154
>PRK04940 hypothetical protein; Provisional
Probab=98.17 E-value=2.7e-05 Score=57.30 Aligned_cols=129 Identities=11% Similarity=0.032 Sum_probs=70.8
Q ss_pred EEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 028834 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (203)
Q Consensus 26 vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS 105 (203)
|+++||+.++..+... . +..+..+..+.+++ +++. ......+..+.+.+..+......+++.|||+|
T Consensus 2 IlYlHGF~SS~~S~~~-K-a~~l~~~~p~~~~~--~l~~---------~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHE-K-VLQLQFIDPDVRLI--SYST---------LHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHH-H-HHhheeeCCCCeEE--ECCC---------CCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 7899999988765320 0 11111111233433 3331 12224444555555444332112579999999
Q ss_pred hhHHHHHHHHhhcCCccceEEEeccCCCCCC------c------cchhh---hhhccCCCE--EEEEeCCCCCCChHHHH
Q 028834 106 MGSRVSCMVACKEDIAASAVLCLGYPLKGMN------G------AVRDE---LLLQITVPI--MFVQVPFLLSLSNIIEK 168 (203)
Q Consensus 106 ~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~------~------~~~~~---~~~~~~~P~--l~~~g~~d~~~~~~~~~ 168 (203)
+||+.|..++.++. +++| ++.|.+.... . ..... ++. ++.|. +++..+.|+..+-....
T Consensus 69 LGGyyA~~La~~~g--~~aV-LiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~-~~~p~r~~vllq~gDEvLDyr~a~ 144 (180)
T PRK04940 69 LGGYWAERIGFLCG--IRQV-IFNPNLFPEENMEGKIDRPEEYADIATKCVTNFR-EKNRDRCLVILSRNDEVLDSQRTA 144 (180)
T ss_pred hHHHHHHHHHHHHC--CCEE-EECCCCChHHHHHHHhCCCcchhhhhHHHHHHhh-hcCcccEEEEEeCCCcccCHHHHH
Confidence 99999999999974 5544 4776654211 0 00111 222 34444 67777888867766666
Q ss_pred HHH
Q 028834 169 EFY 171 (203)
Q Consensus 169 ~~~ 171 (203)
..|
T Consensus 145 ~~y 147 (180)
T PRK04940 145 EEL 147 (180)
T ss_pred HHh
Confidence 554
No 155
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.16 E-value=3.2e-05 Score=58.94 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 81 EFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 81 ~~~~~~i~~~~~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
+.+.++++++.++- +.++|.|+|.|.||-+|+.+|+..| .|+++|++++.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps 55 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCc
Confidence 45677888887763 4569999999999999999999998 79999988764
No 156
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.16 E-value=4.4e-06 Score=69.01 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=79.9
Q ss_pred CCccEEEEEcCCCCCCCchHH-----HHHHHHHHhcCCCeEEEEEeccCCCCCCCC-----------CCCcHHH-HHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWM-----IKWKDMLGKALDAVEVVTFDYPYIAGGKRK-----------APPKAEK-LVEFH 83 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~-----~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~-----------~~~~~~~-~~~~~ 83 (203)
+++|+|++.||+-.++. .|. ....-+++. +||.|..=+.||.-.+.+. ..-+..+ ...|+
T Consensus 71 ~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~Lad--aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDL 147 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLAD--AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDL 147 (403)
T ss_pred CCCCcEEEeeccccccc-cceecCccccHHHHHHH--cCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCH
Confidence 78899999999887763 332 123334444 8999999999984322211 1112233 34588
Q ss_pred HHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC---ccceEEEeccCC
Q 028834 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI---AASAVLCLGYPL 132 (203)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~---~i~~lv~~~~~~ 132 (203)
.+.|++.++.-+.+++..+|||+|+...+..++..|. +|+..++++|..
T Consensus 148 PA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 148 PAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 8899999888788899999999999999998888754 788899988766
No 157
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.16 E-value=2.1e-05 Score=65.28 Aligned_cols=60 Identities=18% Similarity=0.237 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC------ccceEEEeccCCCCCCc
Q 028834 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI------AASAVLCLGYPLKGMNG 137 (203)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~------~i~~lv~~~~~~~~~~~ 137 (203)
......+.+.|+...+.. .++++|+||||||.++..+....+. .|+++|.+++|+.+...
T Consensus 100 ~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~~ 165 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGSPK 165 (389)
T ss_pred HHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCChH
Confidence 356677777777776665 7899999999999999999888643 59999999999875544
No 158
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.15 E-value=1.6e-05 Score=60.20 Aligned_cols=89 Identities=20% Similarity=0.316 Sum_probs=56.4
Q ss_pred EEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCC----cH-HHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP----KA-EKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 26 vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~----~~-~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
.+.+-|..+-. ..+.+.++..... .||.|+.+||+|.|.+...... .. +-...|+..++..+.+.....+..
T Consensus 32 ~~~va~a~Gv~-~~fYRrfA~~a~~--~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y 108 (281)
T COG4757 32 RLVVAGATGVG-QYFYRRFAAAAAK--AGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLY 108 (281)
T ss_pred cEEecccCCcc-hhHhHHHHHHhhc--cCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceE
Confidence 34444443333 3444455555555 8999999999996433211111 11 123456777788887777778999
Q ss_pred EEEeChhHHHHHHHHhh
Q 028834 101 LAGKSMGSRVSCMVACK 117 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~ 117 (203)
.+|||+||.+.-.....
T Consensus 109 ~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 109 FVGHSFGGQALGLLGQH 125 (281)
T ss_pred EeeccccceeecccccC
Confidence 99999999987655543
No 159
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.12 E-value=4.7e-06 Score=69.47 Aligned_cols=112 Identities=16% Similarity=0.092 Sum_probs=66.2
Q ss_pred CCCccEEEEEcCCCCCCCchHHH--HHHHHHHhcCCCeEEEEEeccCC--C--CCCCCC---CCcHHHHHHHHHHHHHHH
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYI--A--GGKRKA---PPKAEKLVEFHTDVVKGA 90 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~--~~~~~~~~l~~g~~v~~~d~~g~--g--~g~~~~---~~~~~~~~~~~~~~i~~~ 90 (203)
.++.|++|++||.+..+++.... .-..+.++ .++.|+++|||-- | +.++-. ......-+.|...+++++
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~--g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV 168 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAAR--GDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWV 168 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhc--CCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHH
Confidence 45679999999976666543211 11222222 3499999999841 1 111100 000112344555555555
Q ss_pred HH---hCC--CCcEEEEEeChhHHHHHHHHhh--cCCccceEEEeccCCC
Q 028834 91 VA---KFP--GHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGYPLK 133 (203)
Q Consensus 91 ~~---~~~--~~~i~l~GhS~Gg~la~~~a~~--~p~~i~~lv~~~~~~~ 133 (203)
.+ +++ .++|.|+|+|.||+.++.+..- ....++.+|+.|++..
T Consensus 169 ~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 169 RDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 54 454 4579999999999999887765 2236666777776653
No 160
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.05 E-value=3.6e-05 Score=67.38 Aligned_cols=106 Identities=16% Similarity=0.181 Sum_probs=58.3
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHh--------------cCCCeEEEEEeccCCCCCCCCCC-CcHHHHHHHHHHHH
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGK--------------ALDAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVV 87 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~--------------l~~g~~v~~~d~~g~g~g~~~~~-~~~~~~~~~~~~~i 87 (203)
.-+|+|++|..|+--. .+..+..... ....++.+++|.-+- -+... .......+.+.++|
T Consensus 89 GIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe---~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE---FTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch---hhhhccHhHHHHHHHHHHHH
Confidence 3559999998876411 1112221110 113566777776541 01001 11223344445555
Q ss_pred HHHHHhCC---------CCcEEEEEeChhHHHHHHHHhh---cCCccceEEEeccCCC
Q 028834 88 KGAVAKFP---------GHPLILAGKSMGSRVSCMVACK---EDIAASAVLCLGYPLK 133 (203)
Q Consensus 88 ~~~~~~~~---------~~~i~l~GhS~Gg~la~~~a~~---~p~~i~~lv~~~~~~~ 133 (203)
....+.+. ...++|+||||||.+|...+.. .++-|.-+++.+.|..
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 54444332 2359999999999999877654 2445666677777654
No 161
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.04 E-value=5.2e-05 Score=62.85 Aligned_cols=102 Identities=9% Similarity=0.002 Sum_probs=67.0
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (203)
|+|+++..+.+.. +. -.+..++.+..|+.|+..|+..- +.. +.......++|+.+.+..+++..+.+ +.++|
T Consensus 103 ~pvLiV~Pl~g~~---~~-L~RS~V~~Ll~g~dVYl~DW~~p--~~v-p~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~G 174 (406)
T TIGR01849 103 PAVLIVAPMSGHY---AT-LLRSTVEALLPDHDVYITDWVNA--RMV-PLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIA 174 (406)
T ss_pred CcEEEEcCCchHH---HH-HHHHHHHHHhCCCcEEEEeCCCC--CCC-chhcCCCCHHHHHHHHHHHHHHhCCC-CcEEE
Confidence 6799998887432 21 13555555556999999998752 211 11111123334444555555665555 99999
Q ss_pred eChhHHHHHHHHhhc-----CCccceEEEeccCCC
Q 028834 104 KSMGSRVSCMVACKE-----DIAASAVLCLGYPLK 133 (203)
Q Consensus 104 hS~Gg~la~~~a~~~-----p~~i~~lv~~~~~~~ 133 (203)
+|+||.+++.+++.+ |.+++.++++++|+.
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID 209 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPID 209 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCcc
Confidence 999999977666553 667999999999886
No 162
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.00 E-value=9.8e-05 Score=62.22 Aligned_cols=106 Identities=17% Similarity=0.257 Sum_probs=67.6
Q ss_pred ccEEEEEcCCCCCCCchHH--HHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC----------CcHHHHHHHHHHHHHHH
Q 028834 23 SPVVVFAHGAGAPSSSDWM--IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP----------PKAEKLVEFHTDVVKGA 90 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~--~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~----------~~~~~~~~~~~~~i~~~ 90 (203)
.|++|++-|-+... ..+. ..+..+..+ .|..++++++|++| .|.+. -..++.+.|++..++++
T Consensus 29 gpifl~~ggE~~~~-~~~~~~~~~~~lA~~--~~a~~v~lEHRyYG--~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 29 GPIFLYIGGEGPIE-PFWINNGFMWELAKE--FGALVVALEHRYYG--KSQPFGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp SEEEEEE--SS-HH-HHHHH-HHHHHHHHH--HTEEEEEE--TTST--TB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccc-hhhhcCChHHHHHHH--cCCcEEEeehhhhc--CCCCccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 67777776544322 1111 112233333 68999999999965 33222 23567888999888888
Q ss_pred HHhC---CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 91 VAKF---PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 91 ~~~~---~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
.... ...|++++|-|.||++|..+-.++|+.+.|.+..++|+.
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 8664 334899999999999999999999999999999999886
No 163
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.97 E-value=3.2e-05 Score=62.42 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=73.8
Q ss_pred cEEEEEcCCCCCCCchHHHHHHHHHHhcC----------CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Q 028834 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKAL----------DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~~~~~~~~~l~----------~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (203)
-+++++||+.|+-. .|-+++.-|. --|.|+++.+||+| -|..+..........+.++..++=+
T Consensus 153 ~PlLl~HGwPGsv~-----EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGyg--wSd~~sk~GFn~~a~ArvmrkLMlR 225 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVR-----EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYG--WSDAPSKTGFNAAATARVMRKLMLR 225 (469)
T ss_pred cceEEecCCCchHH-----HHHhhhhhhcCccccCCccceeEEEeccCCCCcc--cCcCCccCCccHHHHHHHHHHHHHH
Confidence 45999999988752 4555555442 23789999999964 3333333345566777788888888
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhhcCCccceEE
Q 028834 94 FPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 126 (203)
Q Consensus 94 ~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv 126 (203)
++-++..|-|--+|..++..+|..+|++|.|+=
T Consensus 226 Lg~nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 226 LGYNKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred hCcceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 899999999999999999999999999998874
No 164
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.92 E-value=0.00029 Score=54.56 Aligned_cols=104 Identities=20% Similarity=0.162 Sum_probs=67.8
Q ss_pred EEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-CCCcEEEEE
Q 028834 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHPLILAG 103 (203)
Q Consensus 25 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~i~l~G 103 (203)
++|++||.+....+.-+..+.+.+.++ .|..|++.+.- +|.. ........+.+..+++.+...- -.+-+.++|
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~-~g~~v~~leig---~g~~--~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEEL-PGSPVYCLEIG---DGIK--DSSLMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhC-CCCeeEEEEec---CCcc--hhhhccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 499999999887654456777777773 68888888863 3311 1111122333333333333111 223599999
Q ss_pred eChhHHHHHHHHhhcC-CccceEEEeccCCCC
Q 028834 104 KSMGSRVSCMVACKED-IAASAVLCLGYPLKG 134 (203)
Q Consensus 104 hS~Gg~la~~~a~~~p-~~i~~lv~~~~~~~~ 134 (203)
.|+||+++..++..-+ .++...|.+++|--+
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGPHAG 130 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCCcCC
Confidence 9999999999988732 479999999987653
No 165
>COG3150 Predicted esterase [General function prediction only]
Probab=97.92 E-value=8.2e-05 Score=53.60 Aligned_cols=88 Identities=15% Similarity=0.271 Sum_probs=53.4
Q ss_pred EEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 028834 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (203)
Q Consensus 26 vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS 105 (203)
++++||+..+..+.--......+.. ....+.+..|. .+... ....+.+..++...+.+++.|+|-|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~---~~~~i~y~~p~-------l~h~p----~~a~~ele~~i~~~~~~~p~ivGss 67 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE---DVRDIEYSTPH-------LPHDP----QQALKELEKAVQELGDESPLIVGSS 67 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc---cccceeeecCC-------CCCCH----HHHHHHHHHHHHHcCCCCceEEeec
Confidence 7999999987765332223333322 33333333222 22223 3344455555556666779999999
Q ss_pred hhHHHHHHHHhhcCCccceEEEecc
Q 028834 106 MGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 106 ~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
.||..|..++... .+++++ +.|
T Consensus 68 LGGY~At~l~~~~--Girav~-~NP 89 (191)
T COG3150 68 LGGYYATWLGFLC--GIRAVV-FNP 89 (191)
T ss_pred chHHHHHHHHHHh--CChhhh-cCC
Confidence 9999999999886 466666 444
No 166
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.90 E-value=0.00023 Score=58.53 Aligned_cols=30 Identities=23% Similarity=0.254 Sum_probs=28.1
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEE
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVL 126 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv 126 (203)
-|++++|+|-||.+|..++.-.|..+.+++
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~i 213 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVI 213 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEE
Confidence 389999999999999999999999999887
No 167
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.86 E-value=0.00017 Score=53.44 Aligned_cols=108 Identities=24% Similarity=0.297 Sum_probs=65.6
Q ss_pred EEEEEcCCCCCCCchH-HHHHHHHHHhcC--CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 25 VVVFAHGAGAPSSSDW-MIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 25 ~vv~~HG~~~~~~~~~-~~~~~~~~~~l~--~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
.||+..|.+...+... -..+.+.++... ....+..++||-...+. ....+...-...+.+.+..........+|+|
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~-~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl 85 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN-SYGDSVAAGVANLVRLIEEYAARCPNTKIVL 85 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG-SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc-cccccHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4777777665542211 113444444332 35667778888631111 1122344556677777888878888789999
Q ss_pred EEeChhHHHHHHHHhh------cCCccceEEEeccCCC
Q 028834 102 AGKSMGSRVSCMVACK------EDIAASAVLCLGYPLK 133 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~------~p~~i~~lv~~~~~~~ 133 (203)
+|+|+|+.++..++.. ..++|.++++++-|..
T Consensus 86 ~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 86 AGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp EEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred EecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 9999999999999877 3458999999998875
No 168
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.81 E-value=0.00029 Score=59.81 Aligned_cols=109 Identities=14% Similarity=0.107 Sum_probs=68.5
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHH-----------H--H--hcCCCeEEEEEecc-CCCCCCCC---CCCcHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDM-----------L--G--KALDAVEVVTFDYP-YIAGGKRK---APPKAEKLVE 81 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~-----------~--~--~l~~g~~v~~~d~~-g~g~g~~~---~~~~~~~~~~ 81 (203)
.+.|++++++|+.|.++.. ..+.+. + . ...+...++.+|.| |.|.+... .........+
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~--G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~ 152 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMF--ALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSE 152 (462)
T ss_pred CCCCEEEEECCCCcHHHHH--hhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHH
Confidence 4679999999988776311 011100 0 0 01134678888987 54322221 1233456777
Q ss_pred HHHHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHHhhc----------CCccceEEEeccC
Q 028834 82 FHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKE----------DIAASAVLCLGYP 131 (203)
Q Consensus 82 ~~~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a~~~----------p~~i~~lv~~~~~ 131 (203)
++.+.++.+.+.+ ...+++|+|||+||..+..+|..- .-+++|+++-.+.
T Consensus 153 d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 153 DMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred HHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 8888888777655 347999999999999998888762 1357788765543
No 169
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.72 E-value=0.00012 Score=51.55 Aligned_cols=56 Identities=21% Similarity=0.393 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc----CC--ccceEEEeccCCC
Q 028834 78 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE----DI--AASAVLCLGYPLK 133 (203)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~----p~--~i~~lv~~~~~~~ 133 (203)
...+.+.+.+..+.+.....+|++.|||+||.+|..++... +. ..-.++.+++|..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 34456667777777777777899999999999999888762 11 3344555665543
No 170
>COG0627 Predicted esterase [General function prediction only]
Probab=97.68 E-value=0.00024 Score=57.14 Aligned_cols=112 Identities=21% Similarity=0.151 Sum_probs=65.6
Q ss_pred CCCccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEeccCC------------CCCCCCCCC-------cH-HH
Q 028834 20 TSSSPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYPYI------------AGGKRKAPP-------KA-EK 78 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~g~------------g~g~~~~~~-------~~-~~ 78 (203)
+.+-|+++++||...+... +....+.+.... .++.++.+|-.-+ |.+.+...+ .. ..
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~--~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q 128 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADE--SGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ 128 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhh--cCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc
Confidence 3567899999998766322 111223444444 6888888743311 111111110 00 12
Q ss_pred HHHHHHHHHH-HHHHhCC--C--CcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 79 LVEFHTDVVK-GAVAKFP--G--HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 79 ~~~~~~~~i~-~~~~~~~--~--~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
....+.+.+- .+.+.+. . ++..|+||||||.-|+.+|.++|+++..+..+++.+.
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 2223333333 2223332 1 3799999999999999999999999999998887654
No 171
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.65 E-value=0.00066 Score=54.20 Aligned_cols=78 Identities=19% Similarity=0.087 Sum_probs=48.5
Q ss_pred cCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC------CCCcEEEEEeChhHHHHHHHHhh----cCC
Q 028834 51 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF------PGHPLILAGKSMGSRVSCMVACK----EDI 120 (203)
Q Consensus 51 l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~i~l~GhS~Gg~la~~~a~~----~p~ 120 (203)
|.+||.|+++||.|.|. +..........+.+.++...+.. ...++.++|||.||.-+...+.. .|+
T Consensus 23 L~~GyaVv~pDY~Glg~----~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 23 LARGYAVVAPDYEGLGT----PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHCCCEEEecCCCCCCC----cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 34899999999998643 11122233344444444444321 23589999999999988765543 233
Q ss_pred -c--cceEEEeccCC
Q 028834 121 -A--ASAVLCLGYPL 132 (203)
Q Consensus 121 -~--i~~lv~~~~~~ 132 (203)
+ +.|.++.+++.
T Consensus 99 L~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 99 LNRDLVGAAAGGPPA 113 (290)
T ss_pred cccceeEEeccCCcc
Confidence 3 77888766554
No 172
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.62 E-value=0.00018 Score=61.53 Aligned_cols=113 Identities=13% Similarity=-0.003 Sum_probs=77.3
Q ss_pred CCCCccEEEEEc--CCCCCCCchH-HHHHHH---HHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 028834 19 DTSSSPVVVFAH--GAGAPSSSDW-MIKWKD---MLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA 92 (203)
Q Consensus 19 ~~~~~~~vv~~H--G~~~~~~~~~-~~~~~~---~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~ 92 (203)
+.++.|+++..+ .+.-..+... .....+ .+ +.+||.|+..|.||++.+......-.....+|-.+.|.++.+
T Consensus 41 ~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~--aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~ 118 (563)
T COG2936 41 GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWF--AAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAK 118 (563)
T ss_pred CCCCCceeEEeeccccccccccCcchhhccccccee--ecCceEEEEecccccccCCcccceeccccccchhHHHHHHHh
Confidence 356789998888 4433321111 111222 22 238999999999997544332222122477888899999887
Q ss_pred hC-CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 93 KF-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 93 ~~-~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+- -..++..+|.|.+|...+.+|..+|..+++++...+...
T Consensus 119 QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 119 QPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred CCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 53 345899999999999999999999889999987765543
No 173
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.60 E-value=0.00031 Score=57.79 Aligned_cols=107 Identities=9% Similarity=0.016 Sum_probs=74.6
Q ss_pred ccEEEEEcCCCCCCCc---hHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHH-HHHHHHHHHHHHHHhCCCCc
Q 028834 23 SPVVVFAHGAGAPSSS---DWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEK-LVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~---~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 98 (203)
+++++++|..-..-.- ..-..+...+.+ +|..|+.+++++-. .+......++ ..+.+.+.++..++..+.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~--~g~~vfvIsw~nPd--~~~~~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLE--QGLDVFVISWRNPD--ASLAAKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHH--cCCceEEEeccCch--HhhhhccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 4668899985432100 000234455544 89999999988621 1111233334 44788888888888878789
Q ss_pred EEEEEeChhHHHHHHHHhhcCCc-cceEEEeccCCC
Q 028834 99 LILAGKSMGSRVSCMVACKEDIA-ASAVLCLGYPLK 133 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~-i~~lv~~~~~~~ 133 (203)
|.++|+|+||.++..++..++.+ |+.++++..+..
T Consensus 183 InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 99999999999999999988887 999998877654
No 174
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.60 E-value=0.0007 Score=50.85 Aligned_cols=108 Identities=16% Similarity=0.203 Sum_probs=63.5
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHH----------------HhcCCCeEEEEEeccC---CCCCCCCCCCcHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDML----------------GKALDAVEVVTFDYPY---IAGGKRKAPPKAEKLVE 81 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~----------------~~l~~g~~v~~~d~~g---~g~g~~~~~~~~~~~~~ 81 (203)
.++.++|++||.|--... .|++.+ +....||.|+..+--. +-.+...+..-.....+
T Consensus 99 ~~~kLlVLIHGSGvVrAG----QWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~ve 174 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAG----QWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVE 174 (297)
T ss_pred CccceEEEEecCceEecc----hHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHH
Confidence 345689999998766533 343322 1123689998886431 00112212111122233
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC--ccceEEEeccCC
Q 028834 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI--AASAVLCLGYPL 132 (203)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~--~i~~lv~~~~~~ 132 (203)
...-.-..++.-.....++++.||.||.+.+.+..+.|+ .|-++.+-+.++
T Consensus 175 h~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 175 HAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 333333344444466789999999999999999999765 566666656654
No 175
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.59 E-value=0.0018 Score=50.47 Aligned_cols=58 Identities=14% Similarity=0.126 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHh-C--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 76 AEKLVEFHTDVVKGAVAK-F--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~-~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
.....+.+.+.+.=++++ + +.++..++|||+||.+++.....+|+.+...+++++.+-
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 445667777777777766 3 556799999999999999999999999999999987653
No 176
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.57 E-value=0.0095 Score=43.95 Aligned_cols=138 Identities=17% Similarity=0.115 Sum_probs=75.8
Q ss_pred CCCccEEEEEcCCCCCCCchH---HH---HHHHHH----HhcCCCeEEEEEeccCCCCCCCC-CCCc----HHHHHHHHH
Q 028834 20 TSSSPVVVFAHGAGAPSSSDW---MI---KWKDML----GKALDAVEVVTFDYPYIAGGKRK-APPK----AEKLVEFHT 84 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~---~~---~~~~~~----~~l~~g~~v~~~d~~g~g~g~~~-~~~~----~~~~~~~~~ 84 (203)
.....+.++++|.+.+..... .. .++..+ +....+-.+-.+.+-|+-.+... .... ...-...+.
T Consensus 16 d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~ 95 (177)
T PF06259_consen 16 DTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLA 95 (177)
T ss_pred CCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHH
Confidence 445678999999887764321 11 111111 11123335555555443222110 1111 122223344
Q ss_pred HHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCC
Q 028834 85 DVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 85 ~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~ 160 (203)
+.++.+.... ...++.++|||+|+.++-..+...+..+..+|++++|-.+... ..++..-.-..+...+..|+
T Consensus 96 ~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~---a~~l~~~~~~v~a~~a~~D~ 169 (177)
T PF06259_consen 96 RFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDS---ASDLGVPPGHVYAMTAPGDP 169 (177)
T ss_pred HHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCC---HHHcCCCCCcEEEeeCCCCC
Confidence 3444433333 3458999999999999999988867789999999988643322 22232222446677777776
No 177
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.56 E-value=0.00081 Score=51.64 Aligned_cols=100 Identities=12% Similarity=0.051 Sum_probs=55.6
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCC-C--cHHHHHHHHHHHHHHHHHhCCC
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAP-P--KAEKLVEFHTDVVKGAVAKFPG 96 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~-~--~~~~~~~~~~~~i~~~~~~~~~ 96 (203)
...++|++.+|++..+. +++.+...++ +||.|+.+|.-.+ -|.+... . .......++..+++++. ..+.
T Consensus 28 ~~~~tiliA~Gf~rrmd-----h~agLA~YL~~NGFhViRyDsl~H-vGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~ 100 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMD-----HFAGLAEYLSANGFHVIRYDSLNH-VGLSSGDINEFTMSIGKASLLTVIDWLA-TRGI 100 (294)
T ss_dssp --S-EEEEE-TT-GGGG-----GGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHH-HTT-
T ss_pred ccCCeEEEecchhHHHH-----HHHHHHHHHhhCCeEEEecccccc-ccCCCCChhhcchHHhHHHHHHHHHHHH-hcCC
Confidence 34589999999998774 3444444443 9999999998765 3333221 1 22334456777777776 5677
Q ss_pred CcEEEEEeChhHHHHHHHHhhcCCccceEEEec
Q 028834 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (203)
Q Consensus 97 ~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~ 129 (203)
+++.|+.-|..|.+|++.+++- .+.-+|+.-
T Consensus 101 ~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaV 131 (294)
T PF02273_consen 101 RRIGLIAASLSARIAYEVAADI--NLSFLITAV 131 (294)
T ss_dssp --EEEEEETTHHHHHHHHTTTS----SEEEEES
T ss_pred CcchhhhhhhhHHHHHHHhhcc--CcceEEEEe
Confidence 8999999999999999999963 466666554
No 178
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.53 E-value=0.0033 Score=48.44 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=63.1
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHh-cCCCeEEEEEeccCCCCCC---CC-CCCc--HHHHHHHHHHHHHHHH
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGK-ALDAVEVVTFDYPYIAGGK---RK-APPK--AEKLVEFHTDVVKGAV 91 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~-l~~g~~v~~~d~~g~g~g~---~~-~~~~--~~~~~~~~~~~i~~~~ 91 (203)
...+++.++++.|..|..+ |...|++.+.. +.....++.+...|+..-. +. .... ....+++..+---+++
T Consensus 25 ~~~~~~li~~IpGNPG~~g--FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFi 102 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLG--FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFI 102 (301)
T ss_pred CCCCceEEEEecCCCCchh--HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHH
Confidence 3467899999999988753 33355554433 2233557777766652111 00 0011 1122222222222344
Q ss_pred HhC--CCCcEEEEEeChhHHHHHHHHhh--cCCccceEEEecc
Q 028834 92 AKF--PGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGY 130 (203)
Q Consensus 92 ~~~--~~~~i~l~GhS~Gg~la~~~a~~--~p~~i~~lv~~~~ 130 (203)
+.+ .+.+++++|||.|+.+.+.+... ....+.+++++=|
T Consensus 103 k~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 103 KEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred HHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 443 45689999999999999998874 2336777776544
No 179
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.52 E-value=0.00015 Score=60.30 Aligned_cols=91 Identities=12% Similarity=0.184 Sum_probs=61.9
Q ss_pred HHHHHHHhcC-CCeE----EEEE--eccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHH
Q 028834 43 KWKDMLGKAL-DAVE----VVTF--DYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 43 ~~~~~~~~l~-~g~~----v~~~--d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a 115 (203)
.|.+++..+. -||. ++.. |+|- +- ..+...+..+..+...++..-+..+.+|++|++||||+.+.+++.
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~-~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRL---SY-HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhh---cc-CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4666665553 4554 4443 5542 11 122334567777888888777777879999999999999999999
Q ss_pred hhcCC--------ccceEEEeccCCCCCCc
Q 028834 116 CKEDI--------AASAVLCLGYPLKGMNG 137 (203)
Q Consensus 116 ~~~p~--------~i~~lv~~~~~~~~~~~ 137 (203)
..++. .|++.+-+++|+.+.+.
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~lG~~k 230 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPWLGSPK 230 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchhcCChH
Confidence 98765 46777777777754443
No 180
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.52 E-value=0.0006 Score=55.96 Aligned_cols=107 Identities=13% Similarity=0.085 Sum_probs=73.8
Q ss_pred cEEEEEcCCCCCCCchHHH---HHHHHHHhcCCCeEEEEEeccCCCCCCCCCC-----------CcHHHHHHHHHHHHHH
Q 028834 24 PVVVFAHGAGAPSSSDWMI---KWKDMLGKALDAVEVVTFDYPYIAGGKRKAP-----------PKAEKLVEFHTDVVKG 89 (203)
Q Consensus 24 ~~vv~~HG~~~~~~~~~~~---~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~-----------~~~~~~~~~~~~~i~~ 89 (203)
.+|+|.-|.=++... +.. -+.++..+ .+.-++..+.|..|.+..... -..++.+.|.+..+..
T Consensus 81 gPIffYtGNEGdie~-Fa~ntGFm~D~Ap~--~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEW-FANNTGFMWDLAPE--LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHH-HHhccchHHhhhHh--hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 558888886554311 110 12222233 577888889888652221111 1245677888888988
Q ss_pred HHHhCC--CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 90 AVAKFP--GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 90 ~~~~~~--~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
++.... ..+++.+|=|.||+++..+=.++|+.+.|++.-++|..
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 887753 34899999999999999999999999999998887764
No 181
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.51 E-value=0.00031 Score=52.90 Aligned_cols=81 Identities=22% Similarity=0.213 Sum_probs=53.4
Q ss_pred CCeEEEEEeccCCCCCC----C--CCCCcHHHHHHHHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhhc----C--
Q 028834 53 DAVEVVTFDYPYIAGGK----R--KAPPKAEKLVEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKE----D-- 119 (203)
Q Consensus 53 ~g~~v~~~d~~g~g~g~----~--~~~~~~~~~~~~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~~----p-- 119 (203)
.-.+|+++-||=..-.. . ...........|+.++.++++++. ++++++|+|||+|+.+..++..+. |
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~ 123 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLR 123 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHH
Confidence 46778888777311000 0 011113345678899999988887 567999999999999999999884 2
Q ss_pred CccceEEEeccCCC
Q 028834 120 IAASAVLCLGYPLK 133 (203)
Q Consensus 120 ~~i~~lv~~~~~~~ 133 (203)
.++.++-+++.+..
T Consensus 124 ~rLVAAYliG~~v~ 137 (207)
T PF11288_consen 124 KRLVAAYLIGYPVT 137 (207)
T ss_pred hhhheeeecCcccc
Confidence 24444555665543
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.49 E-value=0.00027 Score=60.74 Aligned_cols=60 Identities=18% Similarity=0.177 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcC---------------CccceEEEeccCCCCCC
Q 028834 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED---------------IAASAVLCLGYPLKGMN 136 (203)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p---------------~~i~~lv~~~~~~~~~~ 136 (203)
...+..+.+.|+.+.+..+.++++|+||||||.+++++..... ..|++.|.+++|+.+..
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~ 267 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVP 267 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcH
Confidence 4566777778887777666789999999999999999876321 25788999999886544
No 183
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.48 E-value=0.0004 Score=53.38 Aligned_cols=56 Identities=21% Similarity=0.354 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcC----CccceEEEeccCCC
Q 028834 78 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED----IAASAVLCLGYPLK 133 (203)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p----~~i~~lv~~~~~~~ 133 (203)
...++....+...++.....+|++.|||+||.+|..++.... ...-.++++++|..
T Consensus 109 ~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 109 SLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 344455555566666666778999999999999998887632 22333555666654
No 184
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.47 E-value=0.0015 Score=51.55 Aligned_cols=113 Identities=17% Similarity=0.180 Sum_probs=65.5
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHH-HHHHHHHhCC--
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTD-VVKGAVAKFP-- 95 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~-~i~~~~~~~~-- 95 (203)
..+.|++++.||--.......-..+..++..-. ....++.+|+--.-....... ........+++ .+-.+.+.+.
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHHHHHhhhhhhccCccc
Confidence 356799999999332221111123334343322 566777777653100011111 12223333333 2333334443
Q ss_pred --CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 96 --GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 96 --~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
...-+|.|-|+||..++..+..+|+.+..++..++.+.
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 34689999999999999999999999999998887664
No 185
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.44 E-value=0.00056 Score=52.45 Aligned_cols=52 Identities=21% Similarity=0.255 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc----CCccceEEEeccCCC
Q 028834 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE----DIAASAVLCLGYPLK 133 (203)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~----p~~i~~lv~~~~~~~ 133 (203)
+...+.++.+++.... +|.+.|||.||.+|.+.+... .++|..+.+.++|..
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3444555666665554 599999999999999999873 458899999998764
No 186
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.36 E-value=0.00087 Score=50.70 Aligned_cols=105 Identities=16% Similarity=0.055 Sum_probs=65.9
Q ss_pred CccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 22 SSPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
.+-.|||+-|.+..--. .+.......+.+ .+|..+.+..+..-.| ..........+++...++++...-...+|+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde--~~wslVq~q~~Ssy~G--~Gt~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDE--NSWSLVQPQLRSSYNG--YGTFSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhh--ccceeeeeeccccccc--cccccccccHHHHHHHHHHhhccCcccceE
Confidence 35568888888765432 444455555555 7999999877642111 122233355566666666443332334899
Q ss_pred EEEeChhHHHHHHHHhh--cCCccceEEEecc
Q 028834 101 LAGKSMGSRVSCMVACK--EDIAASAVLCLGY 130 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~--~p~~i~~lv~~~~ 130 (203)
|+|||.|..-.+++... -+..+++.|+.++
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqAp 142 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAP 142 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCc
Confidence 99999999999998843 2446666666554
No 187
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.36 E-value=0.00018 Score=61.81 Aligned_cols=107 Identities=12% Similarity=-0.011 Sum_probs=74.1
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHH-HhcCCCeEEEEEeccCCCCCCCCCC-----CcHHHHHHHHHHHHHHHHHh
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDML-GKALDAVEVVTFDYPYIAGGKRKAP-----PKAEKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~-~~l~~g~~v~~~d~~g~g~g~~~~~-----~~~~~~~~~~~~~i~~~~~~ 93 (203)
.+.+|.++..+|+-+-+-.+. |+.-. .-+..|+.....|.||-|....... ......++|+.+.+++++++
T Consensus 467 dg~~P~LLygYGay~isl~p~---f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~ 543 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGISLDPS---FRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN 543 (712)
T ss_pred cCCCceEEEEecccceeeccc---cccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc
Confidence 456888888888655442222 22221 1123788888889998542211111 12335677888888999887
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEec
Q 028834 94 F--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (203)
Q Consensus 94 ~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~ 129 (203)
. ..++..+.|.|.||.++..++.++|+.+.++|+--
T Consensus 544 gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~V 581 (712)
T KOG2237|consen 544 GYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKV 581 (712)
T ss_pred CCCCccceeEecccCccchhHHHhccCchHhhhhhhcC
Confidence 4 56789999999999999999999999999988543
No 188
>PLN00413 triacylglycerol lipase
Probab=97.22 E-value=0.0012 Score=55.40 Aligned_cols=54 Identities=20% Similarity=0.253 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh--------cCCccceEEEeccCCCC
Q 028834 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK--------EDIAASAVLCLGYPLKG 134 (203)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~--------~p~~i~~lv~~~~~~~~ 134 (203)
..+.+.+..+++.+...++++.|||+||.+|...+.. ...++.++.+++.|-.+
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVG 329 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVG 329 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCc
Confidence 3556677777777777799999999999999988753 12356678888887653
No 189
>PLN02162 triacylglycerol lipase
Probab=97.21 E-value=0.0012 Score=55.26 Aligned_cols=55 Identities=16% Similarity=0.263 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh---c-----CCccceEEEeccCCCC
Q 028834 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---E-----DIAASAVLCLGYPLKG 134 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~---~-----p~~i~~lv~~~~~~~~ 134 (203)
...+.+.+..++.+....++++.|||+||.+|...+.. + ..++.++++++.|-.+
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVG 323 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVG 323 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCcc
Confidence 34556666667777677799999999999999987652 1 2245678888877654
No 190
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.19 E-value=0.0064 Score=46.93 Aligned_cols=104 Identities=13% Similarity=0.200 Sum_probs=61.6
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC----
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP---- 95 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~---- 95 (203)
+++.+|-|+-|..-.. .+-. .|+.++..|. +||.|++.-|.- +..+ ..-.....+.+....+.+.+..+
T Consensus 15 ~P~gvihFiGGaf~ga-~P~i-tYr~lLe~La~~Gy~ViAtPy~~---tfDH-~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGA-APQI-TYRYLLERLADRGYAVIATPYVV---TFDH-QAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceecc-CcHH-HHHHHHHHHHhCCcEEEEEecCC---CCcH-HHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4666677776643332 3222 4555555554 899999988763 2211 11122333344444444444322
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
.-+++=+|||+|+.+-+.+.+..+..-++-|+++.
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 13688899999999999988876655677777764
No 191
>PLN02454 triacylglycerol lipase
Probab=97.12 E-value=0.0021 Score=53.32 Aligned_cols=56 Identities=16% Similarity=0.333 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCc--EEEEEeChhHHHHHHHHhhc-------CC-ccceEEEeccCCCC
Q 028834 78 KLVEFHTDVVKGAVAKFPGHP--LILAGKSMGSRVSCMVACKE-------DI-AASAVLCLGYPLKG 134 (203)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~--i~l~GhS~Gg~la~~~a~~~-------p~-~i~~lv~~~~~~~~ 134 (203)
...+++.+.++.+++.+...+ |++.|||+||.+|+..|... +. .+. +++++.|-.+
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~-~~TFGsPRVG 272 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVT-AIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceE-EEEeCCCccc
Confidence 345567777888888776554 99999999999999988652 11 233 4667766543
No 192
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.09 E-value=0.002 Score=55.82 Aligned_cols=107 Identities=19% Similarity=0.186 Sum_probs=60.1
Q ss_pred ccEEEEEcCCCCCCCchHHH-HHHHHHHhcCCCeEEEEEeccC--CC---CCCCCCCCcHHHHHHHHHHHHHH---HHHh
Q 028834 23 SPVVVFAHGAGAPSSSDWMI-KWKDMLGKALDAVEVVTFDYPY--IA---GGKRKAPPKAEKLVEFHTDVVKG---AVAK 93 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~g~~v~~~d~~g--~g---~g~~~~~~~~~~~~~~~~~~i~~---~~~~ 93 (203)
.|++|++||.+...++.... .+........++..|+.++||- .| .+.... +.-.-+.|...++++ -+..
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~--~gN~gl~Dq~~AL~wv~~~I~~ 189 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA--PGNLGLFDQLLALRWVKDNIPS 189 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC--CCcccHHHHHHHHHHHHHHHHh
Confidence 79999999987655442111 1111111112578899999883 11 112111 111223344444444 4445
Q ss_pred CC--CCcEEEEEeChhHHHHHHHHhhc--CCccceEEEeccC
Q 028834 94 FP--GHPLILAGKSMGSRVSCMVACKE--DIAASAVLCLGYP 131 (203)
Q Consensus 94 ~~--~~~i~l~GhS~Gg~la~~~a~~~--p~~i~~lv~~~~~ 131 (203)
++ .++|.|+|||.||..+-.++... ...+..+|.+++.
T Consensus 190 FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 190 FGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred cCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 54 45799999999999998776641 2355555655544
No 193
>PLN02408 phospholipase A1
Probab=97.09 E-value=0.0043 Score=50.80 Aligned_cols=80 Identities=16% Similarity=0.229 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHhCCCC--cEEEEEeChhHHHHHHHHhhc----CC-ccceEEEeccCCCCCCccchhhhhhccCCCE
Q 028834 79 LVEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKE----DI-AASAVLCLGYPLKGMNGAVRDELLLQITVPI 151 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~--~i~l~GhS~Gg~la~~~a~~~----p~-~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~ 151 (203)
..+++.+.+..+++.+... +|++.|||+||.+|...|... +. ..-.+++++.|-.+...... .+.......
T Consensus 180 ~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~--~~~~~~~~~ 257 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRR--QLEKQGTKV 257 (365)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHH--HHHhcCCcE
Confidence 3456667777777777543 599999999999999888762 11 12346777776654332111 122233445
Q ss_pred EEEEeCCCC
Q 028834 152 MFVQVPFLL 160 (203)
Q Consensus 152 l~~~g~~d~ 160 (203)
+.+.-..|+
T Consensus 258 lRVvN~~D~ 266 (365)
T PLN02408 258 LRIVNSDDV 266 (365)
T ss_pred EEEEeCCCC
Confidence 555556665
No 194
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.96 E-value=0.0051 Score=50.09 Aligned_cols=65 Identities=18% Similarity=0.183 Sum_probs=45.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhcC-----CccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCC
Q 028834 95 PGHPLILAGKSMGSRVSCMVACKED-----IAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~~p-----~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~ 160 (203)
+.+++.|+|||+|+.+.+++..... ..|..+++++.|.......-.. .-..+.-...-++.++|.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~-~r~vVsGr~vN~YS~~D~ 287 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRK-IRSVVSGRLVNVYSENDW 287 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHH-HHHHccCeEEEEecCcHH
Confidence 5668999999999999998887632 3589999999988643322111 112356677778888886
No 195
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.93 E-value=0.0031 Score=54.68 Aligned_cols=109 Identities=12% Similarity=0.007 Sum_probs=73.8
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCC-CCC----CCCCcHHHHHHHHHHHHHHHHHhC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAG-GKR----KAPPKAEKLVEFHTDVVKGAVAKF 94 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~-g~~----~~~~~~~~~~~~~~~~i~~~~~~~ 94 (203)
..+.|+++.--|.-+....+.+. -..+.-+..|+.......||-|. |.. .........+.|+.+..+++++..
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs--~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g 522 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFS--IARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEG 522 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcc--cceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcC
Confidence 45678888888855554333211 12222234788888888887321 110 011123357788888888888774
Q ss_pred --CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 95 --PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 95 --~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
..++|+++|-|.||++.-.++...|+.++++|+-.|
T Consensus 523 ~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VP 560 (682)
T COG1770 523 YTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVP 560 (682)
T ss_pred cCCccceEEeccCchhHHHHHHHhhChhhhhheeecCC
Confidence 345799999999999999999999999999996544
No 196
>PLN02934 triacylglycerol lipase
Probab=96.81 E-value=0.0049 Score=52.27 Aligned_cols=55 Identities=16% Similarity=0.240 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh-----c---CCccceEEEeccCCCC
Q 028834 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK-----E---DIAASAVLCLGYPLKG 134 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~-----~---p~~i~~lv~~~~~~~~ 134 (203)
...+.+.++.+++.+...++++.|||+||.+|...+.. . ..++..+++++.|-.+
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVG 366 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIG 366 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCcc
Confidence 34567777788888777799999999999999988743 1 1234567777777553
No 197
>PLN02310 triacylglycerol lipase
Probab=96.78 E-value=0.0083 Score=49.75 Aligned_cols=79 Identities=23% Similarity=0.178 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHhCC----CCcEEEEEeChhHHHHHHHHhh----cCCccceEEEeccCCCCCCccchhhhhhccCCCE
Q 028834 80 VEFHTDVVKGAVAKFP----GHPLILAGKSMGSRVSCMVACK----EDIAASAVLCLGYPLKGMNGAVRDELLLQITVPI 151 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~~----~~~i~l~GhS~Gg~la~~~a~~----~p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~ 151 (203)
.+.+.+.+..+++.+. ..+|++.|||+||.+|+..|.. .+...-.+++++.|-.+.... ...+.......
T Consensus 188 ~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~F--a~~~~~~~~~~ 265 (405)
T PLN02310 188 SEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAF--KEKLNELGVKT 265 (405)
T ss_pred HHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHH--HHHHHhcCCCE
Confidence 3455566666666542 2379999999999999988864 233333477777776543221 11122334455
Q ss_pred EEEEeCCCC
Q 028834 152 MFVQVPFLL 160 (203)
Q Consensus 152 l~~~g~~d~ 160 (203)
+.+.-..|+
T Consensus 266 ~RVvn~~Di 274 (405)
T PLN02310 266 LRVVVKQDK 274 (405)
T ss_pred EEEEECCCc
Confidence 555556676
No 198
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.75 E-value=0.022 Score=48.50 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=61.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC-CCcE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-GHPL 99 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~i 99 (203)
.++|.||+=+=.|+..+-.-+..-.++-..+..|..|+.+...- ... +-..........+..++.+.+... ..+.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~p--~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp 142 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFFP--EPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKP 142 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEecC--CCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 34565555443333332211112223333334588777776542 111 111222233333333444444433 2389
Q ss_pred EEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+|+|.++||-.++.+|+..|+.+.-+|+-++|+.
T Consensus 143 ~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 143 NLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred eEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 9999999999999999999999999998887765
No 199
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.66 E-value=0.01 Score=51.01 Aligned_cols=99 Identities=20% Similarity=0.334 Sum_probs=65.1
Q ss_pred CccEEEEEcCCCCCC-----CchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC--
Q 028834 22 SSPVVVFAHGAGAPS-----SSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-- 94 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~-----~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-- 94 (203)
.+-+|+-.||.|.-. +..|+..|+..+ +.-++++||.- . +..++....+++--+..|++++.
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL-----~cPiiSVdYSL--A----PEaPFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL-----GCPIISVDYSL--A----PEAPFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHh-----CCCeEEeeecc--C----CCCCCCcHHHHHHHHHHHHhcCHHH
Confidence 456789999977543 335555555544 89999999875 2 23334455555555667777552
Q ss_pred ---CCCcEEEEEeChhHHHHHHHHhh----cCCccceEEEeccC
Q 028834 95 ---PGHPLILAGKSMGSRVSCMVACK----EDIAASAVLCLGYP 131 (203)
Q Consensus 95 ---~~~~i~l~GhS~Gg~la~~~a~~----~p~~i~~lv~~~~~ 131 (203)
.+++|++.|-|.||.+.+-++.+ .--..+|+++.-+|
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred hCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 35799999999999988877765 22234566654443
No 200
>PLN02571 triacylglycerol lipase
Probab=96.63 E-value=0.0044 Score=51.47 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHhCCCC--cEEEEEeChhHHHHHHHHhh
Q 028834 79 LVEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~--~i~l~GhS~Gg~la~~~a~~ 117 (203)
..+++.+.+..+++.+... +|++.|||+||.+|...|..
T Consensus 206 ar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3456777777777776543 79999999999999998875
No 201
>PLN02324 triacylglycerol lipase
Probab=96.58 E-value=0.0092 Score=49.56 Aligned_cols=40 Identities=18% Similarity=0.289 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHhCCCC--cEEEEEeChhHHHHHHHHhh
Q 028834 78 KLVEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~--~i~l~GhS~Gg~la~~~a~~ 117 (203)
...+.+.+.+..+++.+... +|++.|||+||.+|+..|..
T Consensus 194 SareqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 35566777778888877543 69999999999999988864
No 202
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.56 E-value=0.014 Score=49.67 Aligned_cols=78 Identities=22% Similarity=0.216 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhCC----CCcEEEEEeChhHHHHHHHHhh----cCCc-cceEEEeccCCCCCCccchhhhhhccCCCE
Q 028834 81 EFHTDVVKGAVAKFP----GHPLILAGKSMGSRVSCMVACK----EDIA-ASAVLCLGYPLKGMNGAVRDELLLQITVPI 151 (203)
Q Consensus 81 ~~~~~~i~~~~~~~~----~~~i~l~GhS~Gg~la~~~a~~----~p~~-i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~ 151 (203)
+++.+.+..+++.+. ..+|++.|||+||.+|+..|.. .+.. .-.+++++.|-.+...... .+.......
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~--~~~~l~~~~ 375 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKE--KLNELGVKV 375 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHH--HHHhcCCCE
Confidence 345555666665543 2379999999999999988865 2322 2335566666543332111 122334556
Q ss_pred EEEEeCCCC
Q 028834 152 MFVQVPFLL 160 (203)
Q Consensus 152 l~~~g~~d~ 160 (203)
+.+.-..|+
T Consensus 376 lRVVN~~Di 384 (525)
T PLN03037 376 LRVVNKQDI 384 (525)
T ss_pred EEEEECCCc
Confidence 666667776
No 203
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.53 E-value=0.052 Score=45.89 Aligned_cols=108 Identities=17% Similarity=0.251 Sum_probs=77.5
Q ss_pred CCccEEEEEcCCCCCCCchH----HHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC----------CcHHHHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDW----MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP----------PKAEKLVEFHTDV 86 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~----~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~----------~~~~~~~~~~~~~ 86 (203)
...|+.+++-|-|... ..| ...|.....+ .|..|+..++|.+| .+.+. -+..+.+.|+++.
T Consensus 84 ~~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~Akk--fgA~v~~lEHRFYG--~S~P~~~~st~nlk~LSs~QALaDla~f 158 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPES-DKWVGNENLTWLQWAKK--FGATVFQLEHRFYG--QSSPIGDLSTSNLKYLSSLQALADLAEF 158 (514)
T ss_pred CCCceEEEEcCCCCCC-CCccccCcchHHHHHHH--hCCeeEEeeeeccc--cCCCCCCCcccchhhhhHHHHHHHHHHH
Confidence 4467777777755443 122 1345666666 79999999999965 22221 1244667778877
Q ss_pred HHHHHHhCC---CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 87 VKGAVAKFP---GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 87 i~~~~~~~~---~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
|+.+...++ ..+.+.+|-|.-|.++..+=.++|+.+.|.|..++|..
T Consensus 159 I~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 159 IKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 777766652 23899999999999999999999999999999998875
No 204
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.52 E-value=0.051 Score=45.27 Aligned_cols=107 Identities=18% Similarity=0.251 Sum_probs=66.1
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhc--------------------CCCeEEEEEecc-CCCCCCCCC----CC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKA--------------------LDAVEVVTFDYP-YIAGGKRKA----PP 74 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l--------------------~~g~~v~~~d~~-g~g~g~~~~----~~ 74 (203)
.+.+|++|++.|..|+++ .+ -.+.+. .+...++-+|.| |.|-+.... ..
T Consensus 37 ~~~~Pl~~wlnGGPG~SS-----~~-g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~ 110 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSS-----MW-GLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVW 110 (415)
T ss_dssp GCSS-EEEEEE-TTTB-T-----HH-HHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-
T ss_pred CCCccEEEEecCCceecc-----cc-ccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccc
Confidence 356899999999988874 12 223221 123467788877 544222211 22
Q ss_pred cHHHHHHHHHHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHHhh----c------CCccceEEEeccCC
Q 028834 75 KAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------DIAASAVLCLGYPL 132 (203)
Q Consensus 75 ~~~~~~~~~~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a~~----~------p~~i~~lv~~~~~~ 132 (203)
......+++.+.++.+...+ ..++++|.|-|.||..+..+|.. . +-.++|+++-++..
T Consensus 111 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 111 NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 45667778888888887765 45689999999999988877765 2 45789998776544
No 205
>PLN02802 triacylglycerol lipase
Probab=96.49 E-value=0.016 Score=49.30 Aligned_cols=54 Identities=28% Similarity=0.431 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhCCCC--cEEEEEeChhHHHHHHHHhhc----CCc-cceEEEeccCCCC
Q 028834 81 EFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKE----DIA-ASAVLCLGYPLKG 134 (203)
Q Consensus 81 ~~~~~~i~~~~~~~~~~--~i~l~GhS~Gg~la~~~a~~~----p~~-i~~lv~~~~~~~~ 134 (203)
+++.+.+..+++.+..+ +|++.|||+||.+|...|... +.. ...+++++.|-.+
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVG 372 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVG 372 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcc
Confidence 45566677777776443 799999999999999887752 221 1236667766543
No 206
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=96.41 E-value=0.011 Score=48.25 Aligned_cols=52 Identities=15% Similarity=0.280 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh----cC--CccceEEEeccCC
Q 028834 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK----ED--IAASAVLCLGYPL 132 (203)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~----~p--~~i~~lv~~~~~~ 132 (203)
..+.+.++.+++.+..-+|++.|||+||.+|...|.. .. ....++++++.|-
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 5677788888888887899999999999999988876 22 2355677777764
No 207
>PLN02847 triacylglycerol lipase
Probab=96.35 E-value=0.046 Score=47.42 Aligned_cols=36 Identities=17% Similarity=0.421 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh
Q 028834 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
.+...+..+++.+..-+++++|||+||.+|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333444555566666799999999999999987765
No 208
>PLN02719 triacylglycerol lipase
Probab=96.18 E-value=0.034 Score=47.33 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEEEeChhHHHHHHHHhhc-------CC----ccceEEEeccCCCCCCccchhh
Q 028834 79 LVEFHTDVVKGAVAKFPG-----HPLILAGKSMGSRVSCMVACKE-------DI----AASAVLCLGYPLKGMNGAVRDE 142 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~-----~~i~l~GhS~Gg~la~~~a~~~-------p~----~i~~lv~~~~~~~~~~~~~~~~ 142 (203)
..+++.+.+..+++.+.. .+|++.|||+||.+|...|... +. ..-.+++++.|-.+......
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~~Fa~-- 352 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNIRFKE-- 352 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCHHHHH--
Confidence 345666677777776642 3799999999999999888541 00 01225666666543332111
Q ss_pred hhhccCCCEEEEEeCCCC
Q 028834 143 LLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 143 ~~~~~~~P~l~~~g~~d~ 160 (203)
.+.......+.+.-..|+
T Consensus 353 ~~~~~~~~~lRVvN~~D~ 370 (518)
T PLN02719 353 RIEELGVKVLRVVNEHDV 370 (518)
T ss_pred HHHhcCCcEEEEEeCCCC
Confidence 122233455666666676
No 209
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.17 E-value=0.31 Score=35.75 Aligned_cols=57 Identities=18% Similarity=0.127 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCC
Q 028834 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
.....+..++.-.++++..-..+.++-|-||||..|..+..++|+.+.++|.+++..
T Consensus 80 ~adr~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 80 AADRAERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 335555666666666665544568889999999999999999999999999988643
No 210
>PLN02753 triacylglycerol lipase
Probab=95.94 E-value=0.016 Score=49.40 Aligned_cols=39 Identities=21% Similarity=0.237 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEEEeChhHHHHHHHHhh
Q 028834 79 LVEFHTDVVKGAVAKFPG-----HPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~-----~~i~l~GhS~Gg~la~~~a~~ 117 (203)
..+++.+.++.+++.+.. -+|++.|||+||.+|+..|..
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 455666677777776632 489999999999999988854
No 211
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.92 E-value=0.017 Score=47.77 Aligned_cols=107 Identities=11% Similarity=0.117 Sum_probs=77.0
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCC----CcHHHHHHHHHHHHHHHHHhCC
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP----PKAEKLVEFHTDVVKGAVAKFP 95 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~----~~~~~~~~~~~~~i~~~~~~~~ 95 (203)
+..+|+|+..-|++... ++.......+ .+-.-+.+++|.++.+...+. -...+...|.-++++.++.-+.
T Consensus 60 ~~drPtV~~T~GY~~~~-~p~r~Ept~L-----ld~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~ 133 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVST-SPRRSEPTQL-----LDGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP 133 (448)
T ss_pred CCCCCeEEEecCccccc-CccccchhHh-----hccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc
Confidence 45689999999988765 3332222222 355667889998753332221 2345667777778888877665
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
. +.+-.|-|-||+.++.+=.-+|+.+.+.|...+|..
T Consensus 134 ~-kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 134 G-KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred C-CceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 4 788999999999999998889999999999888864
No 212
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.87 E-value=0.025 Score=48.85 Aligned_cols=105 Identities=12% Similarity=0.058 Sum_probs=71.1
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCC-------CCcHHHHHHHHHHHHHHHHHhC
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-------PPKAEKLVEFHTDVVKGAVAKF 94 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~-------~~~~~~~~~~~~~~i~~~~~~~ 94 (203)
+.|++|+--|.-.-+..+....-.... +..|...+..+.||- |.-.+ -.......+|+.++.++++++.
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~W--LerGg~~v~ANIRGG--GEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rg 495 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLW--LERGGVFVLANIRGG--GEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRG 495 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHH--HhcCCeEEEEecccC--CccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhC
Confidence 466666555544333333322222333 347888899999983 32211 1233467789999999998875
Q ss_pred --CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 95 --PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 95 --~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
..+++.+.|-|-||+++-....+.|+.+.++|+--+
T Consensus 496 itspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 496 ITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred CCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 346899999999999999999999998888885443
No 213
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.82 E-value=0.028 Score=43.90 Aligned_cols=104 Identities=17% Similarity=0.241 Sum_probs=63.4
Q ss_pred CCCccEEEEEcCCCCCCCchHHH-HHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHH-------HHHHHHH
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMI-KWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHT-------DVVKGAV 91 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~-------~~i~~~~ 91 (203)
++..++-+++-|-|.+. ++.. ...+-+.. ++...+.++-|. .|.+.++......++.+. +.|++..
T Consensus 110 QK~~~KOG~~a~tgdh~--y~rr~~L~~p~~k--~~i~tmvle~pf--Ygqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~ 183 (371)
T KOG1551|consen 110 QKMADLCLSWALTGDHV--YTRRLVLSKPINK--REIATMVLEKPF--YGQRVPEEQIIHMLEYVTDLFKMGRATIQEFV 183 (371)
T ss_pred cCcCCeeEEEeecCCce--eEeeeeecCchhh--hcchheeeeccc--ccccCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 44456566666655543 2211 11122222 688888889888 456656655555555443 3444554
Q ss_pred HhCC------CCcEEEEEeChhHHHHHHHHhhcCCccceEEEec
Q 028834 92 AKFP------GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (203)
Q Consensus 92 ~~~~------~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~ 129 (203)
+.+. -.+..|+|-||||.+|....+.++..|+-+=+++
T Consensus 184 ~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~ 227 (371)
T KOG1551|consen 184 KLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLN 227 (371)
T ss_pred HhcccccccCcccceeeeeecccHHHHhhcccCCCCcccccccc
Confidence 4443 3489999999999999999998776666554443
No 214
>PLN02761 lipase class 3 family protein
Probab=95.68 E-value=0.023 Score=48.47 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhCC------CCcEEEEEeChhHHHHHHHHhh
Q 028834 79 LVEFHTDVVKGAVAKFP------GHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~------~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
..+++.+.+..+++.+. ..+|++.|||+||.+|...|..
T Consensus 270 aR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 270 AREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 44566677777777662 2379999999999999988853
No 215
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.68 E-value=0.1 Score=43.14 Aligned_cols=88 Identities=22% Similarity=0.257 Sum_probs=56.7
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEec-cCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY-PYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~-~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
...-||+.|-|+= .+.-......+.. +|+.|+.+|- |++ .+ ....+....|+...++....+.+..++.|
T Consensus 260 d~~av~~SGDGGW--r~lDk~v~~~l~~--~gvpVvGvdsLRYf--W~---~rtPe~~a~Dl~r~i~~y~~~w~~~~~~l 330 (456)
T COG3946 260 DTVAVFYSGDGGW--RDLDKEVAEALQK--QGVPVVGVDSLRYF--WS---ERTPEQIAADLSRLIRFYARRWGAKRVLL 330 (456)
T ss_pred ceEEEEEecCCch--hhhhHHHHHHHHH--CCCceeeeehhhhh--hc---cCCHHHHHHHHHHHHHHHHHhhCcceEEE
Confidence 3445666664431 1111223333333 8999999984 332 12 12234677888888888888888889999
Q ss_pred EEeChhHHHHHHHHhhcC
Q 028834 102 AGKSMGSRVSCMVACKED 119 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p 119 (203)
+|+|+|+=+--..-.+.|
T Consensus 331 iGySfGADvlP~~~n~L~ 348 (456)
T COG3946 331 IGYSFGADVLPFAYNRLP 348 (456)
T ss_pred EeecccchhhHHHHHhCC
Confidence 999999987766665544
No 216
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.32 E-value=0.02 Score=47.13 Aligned_cols=92 Identities=17% Similarity=0.211 Sum_probs=47.8
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCC-eEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCc
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDA-VEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g-~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (203)
.++...||+.||..+.. +..|...+...... -....+....++.-.. ........-..+++.+.........++
T Consensus 77 ~k~~HLvVlthGi~~~~----~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~-T~~Gv~~lG~Rla~~~~e~~~~~si~k 151 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGAD----MEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQ-TFDGVDVLGERLAEEVKETLYDYSIEK 151 (405)
T ss_pred cCCceEEEecccccccc----HHHHHHHHHhhhcCCCcceEeeeccccchhh-ccccceeeecccHHHHhhhhhccccce
Confidence 34567899999988721 23455555444321 1112222222211111 112222233344444444333334679
Q ss_pred EEEEEeChhHHHHHHHHh
Q 028834 99 LILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~ 116 (203)
|..+|||.||+++.+...
T Consensus 152 ISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeeeecCCeeeeEEEE
Confidence 999999999998875544
No 217
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=95.08 E-value=0.13 Score=39.62 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=45.5
Q ss_pred CeEEEEEeccCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHh-C-CCCcEEEEEeChhHHHHHHHHhhc---CC---ccce
Q 028834 54 AVEVVTFDYPYIAGGKR-KAPPKAEKLVEFHTDVVKGAVAK-F-PGHPLILAGKSMGSRVSCMVACKE---DI---AASA 124 (203)
Q Consensus 54 g~~v~~~d~~g~g~g~~-~~~~~~~~~~~~~~~~i~~~~~~-~-~~~~i~l~GhS~Gg~la~~~a~~~---p~---~i~~ 124 (203)
|+.+..++||..=..-. ...........+-.+.+...+.. . ..++++++|+|+|+.++..++.+. +. ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 56778888886211100 01122334444444444444433 2 457899999999999999888772 11 2334
Q ss_pred EEEeccCC
Q 028834 125 VLCLGYPL 132 (203)
Q Consensus 125 lv~~~~~~ 132 (203)
+|+++-|.
T Consensus 82 fVl~gnP~ 89 (225)
T PF08237_consen 82 FVLIGNPR 89 (225)
T ss_pred EEEecCCC
Confidence 66676553
No 218
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.96 E-value=0.069 Score=46.13 Aligned_cols=39 Identities=21% Similarity=0.445 Sum_probs=30.2
Q ss_pred CCcEEEEEeChhHHHHHHHHhh-----cC------CccceEEEeccCCCC
Q 028834 96 GHPLILAGKSMGSRVSCMVACK-----ED------IAASAVLCLGYPLKG 134 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~-----~p------~~i~~lv~~~~~~~~ 134 (203)
.++|+-+||||||.++=.+..+ .| ...+|+|.++.|..+
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 6789999999999998776654 12 367889988887653
No 219
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.87 E-value=0.096 Score=39.81 Aligned_cols=78 Identities=15% Similarity=0.153 Sum_probs=48.6
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEE-EEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEV-VTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v-~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
+.+|||+-|+|.+.. .+..+.. ..++.+ +..||+.. ..+ . + + ...++|.|
T Consensus 11 ~~LilfF~GWg~d~~-----~f~hL~~--~~~~D~l~~yDYr~l-------~~d--~---~-------~---~~y~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGWGMDPS-----PFSHLIL--PENYDVLICYDYRDL-------DFD--F---D-------L---SGYREIYL 61 (213)
T ss_pred CeEEEEEecCCCChH-----HhhhccC--CCCccEEEEecCccc-------ccc--c---c-------c---ccCceEEE
Confidence 578999999987752 3444331 245555 45577742 111 0 0 1 13468999
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
++||||-..|..+....| +...|.+.+.
T Consensus 62 vAWSmGVw~A~~~l~~~~--~~~aiAINGT 89 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGIP--FKRAIAINGT 89 (213)
T ss_pred EEEeHHHHHHHHHhccCC--cceeEEEECC
Confidence 999999999888766543 5566666543
No 220
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.21 E-value=0.27 Score=41.96 Aligned_cols=42 Identities=26% Similarity=0.316 Sum_probs=34.6
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhh-----cCCccceEEEeccCCCCC
Q 028834 94 FPGHPLILAGKSMGSRVSCMVACK-----EDIAASAVLCLGYPLKGM 135 (203)
Q Consensus 94 ~~~~~i~l~GhS~Gg~la~~~a~~-----~p~~i~~lv~~~~~~~~~ 135 (203)
.+.+||.|+|||.|+.+.+++... .-..|..++++++|.+..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 467899999999999999987763 345899999999998643
No 221
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.57 E-value=0.15 Score=40.32 Aligned_cols=39 Identities=15% Similarity=0.356 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
..+..+++..+++.+...+|+|.|||.||.+|..+-.+.
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 334455555666667778999999999999999888775
No 222
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.57 E-value=0.15 Score=40.32 Aligned_cols=39 Identities=15% Similarity=0.356 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
..+..+++..+++.+...+|+|.|||.||.+|..+-.+.
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 334455555666667778999999999999999888775
No 223
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.42 E-value=0.69 Score=39.36 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=66.5
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCC--
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-- 95 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 95 (203)
+++-+.|+.|.+.|+-...+ + .-..+++. .|...+.+.-|-. .|.... ...+..-+.+.+.|+..++.++
T Consensus 284 PGD~KPPL~VYFSGyR~aEG--F--Egy~MMk~--Lg~PfLL~~DpRl-eGGaFY-lGs~eyE~~I~~~I~~~L~~LgF~ 355 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRPAEG--F--EGYFMMKR--LGAPFLLIGDPRL-EGGAFY-LGSDEYEQGIINVIQEKLDYLGFD 355 (511)
T ss_pred CcCCCCCeEEeeccCcccCc--c--hhHHHHHh--cCCCeEEeecccc-ccceee-eCcHHHHHHHHHHHHHHHHHhCCC
Confidence 55566788999999876543 1 22334444 4766666644432 222222 2233456677778888887764
Q ss_pred CCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccC
Q 028834 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (203)
Q Consensus 96 ~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~ 131 (203)
.+..+|-|-|||..-|++++++. ...++| ++=|
T Consensus 356 ~~qLILSGlSMGTfgAlYYga~l--~P~AIi-VgKP 388 (511)
T TIGR03712 356 HDQLILSGLSMGTFGALYYGAKL--SPHAII-VGKP 388 (511)
T ss_pred HHHeeeccccccchhhhhhcccC--CCceEE-EcCc
Confidence 45799999999999999999984 244555 4433
No 224
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=93.32 E-value=0.98 Score=34.76 Aligned_cols=98 Identities=11% Similarity=0.090 Sum_probs=56.1
Q ss_pred EEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHH-HHHHHHHhCCC--CcEEEE
Q 028834 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTD-VVKGAVAKFPG--HPLILA 102 (203)
Q Consensus 26 vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~-~i~~~~~~~~~--~~i~l~ 102 (203)
+|++=|+.+... ..+..+.+.-.. .|+.++.+-.+-.. .-.+. .......+ .++.+.+.... .+|.+-
T Consensus 2 lvvl~gW~gA~~-~hl~KY~~~Y~~--~g~~il~~~~~~~~--~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~il~H 72 (240)
T PF05705_consen 2 LVVLLGWMGAKP-KHLAKYSDLYQD--PGFDILLVTSPPAD--FFWPS----KRLAPAADKLLELLSDSQSASPPPILFH 72 (240)
T ss_pred EEEEEeCCCCCH-HHHHHHHHHHHh--cCCeEEEEeCCHHH--Heeec----cchHHHHHHHHHHhhhhccCCCCCEEEE
Confidence 677778776653 333456666655 89999998766421 00011 12222222 22222222222 389999
Q ss_pred EeChhHHHHHHHHhh---------c-CCccceEEEeccCC
Q 028834 103 GKSMGSRVSCMVACK---------E-DIAASAVLCLGYPL 132 (203)
Q Consensus 103 GhS~Gg~la~~~a~~---------~-p~~i~~lv~~~~~~ 132 (203)
.+|+||...+..... . -.+++|+|+=+.|.
T Consensus 73 ~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~ 112 (240)
T PF05705_consen 73 SFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPG 112 (240)
T ss_pred EEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCC
Confidence 999988888766552 1 12489999777664
No 225
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=92.43 E-value=4.6 Score=32.82 Aligned_cols=99 Identities=15% Similarity=0.082 Sum_probs=54.8
Q ss_pred CCCCCccEEEEEcCCCCCCCc-hHHHHHHHHHHhcC--CCeEEEEEeccCCCCCCCC--------CCCc-----HH-HHH
Q 028834 18 DDTSSSPVVVFAHGAGAPSSS-DWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRK--------APPK-----AE-KLV 80 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~--~g~~v~~~d~~g~g~g~~~--------~~~~-----~~-~~~ 80 (203)
.+...+.+|+|+-|....-+. ++. ....+.+.++ .+..+++.--+|.|.+.-. .+.. +. ...
T Consensus 26 ~~ds~k~lV~CfDGT~nrfg~qp~T-NVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~ 104 (423)
T COG3673 26 AEDSMKRLVFCFDGTWNRFGAQPPT-NVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLV 104 (423)
T ss_pred cccCcceEEEEecCchhhcCCCCcc-hHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHH
Confidence 445678899999994332211 111 2233333333 5677777777775533110 0000 01 112
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhh
Q 028834 81 EFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 81 ~~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
..+.++..-++..+ .++.|+++|+|-|+..+--+|..
T Consensus 105 ~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 105 QNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 23333444455666 56799999999999998877653
No 226
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=92.42 E-value=1.6 Score=34.64 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhh
Q 028834 80 VEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
...+......+.+.+ ..++|+++|+|=|+..|-.++..
T Consensus 74 ~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 345555566666665 45689999999999999999875
No 227
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.27 E-value=1.4 Score=37.42 Aligned_cols=111 Identities=12% Similarity=0.130 Sum_probs=63.2
Q ss_pred CCccEEEEEcCCCCCCCch-HHHHHHHHH----------Hhc-------CCCeEEEEEecc-CCCCCCCCCC---CcHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSD-WMIKWKDML----------GKA-------LDAVEVVTFDYP-YIAGGKRKAP---PKAEK 78 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~-~~~~~~~~~----------~~l-------~~g~~v~~~d~~-g~g~g~~~~~---~~~~~ 78 (203)
...|+|+++-|+.|.++-. .+....+.. ..+ .+...++-+|.| |.|-+..... .....
T Consensus 64 ~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~ 143 (433)
T PLN03016 64 KEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDIS 143 (433)
T ss_pred ccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 4579999999988776311 111111110 001 134568888877 3332211111 11123
Q ss_pred HHHHHHHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHHhh----c------CCccceEEEeccC
Q 028834 79 LVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------DIAASAVLCLGYP 131 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a~~----~------p~~i~~lv~~~~~ 131 (203)
..+++.+.+..+.+.+ ..++++|+|.|.||..+..+|.. . +-.++|+++-.+.
T Consensus 144 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 144 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 3356666777766554 45689999999999977777654 1 2377888865553
No 228
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=91.13 E-value=1.6 Score=41.43 Aligned_cols=96 Identities=17% Similarity=0.226 Sum_probs=55.5
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh-CCCCc
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-FPGHP 98 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 98 (203)
.+..|+++|+|..-+... .+..+...+ .+..+.+.+ ...-+. ..++.+++..-..++. ....+
T Consensus 2120 ~se~~~~Ffv~pIEG~tt-----~l~~la~rl--e~PaYglQ~-----T~~vP~----dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTT-----ALESLASRL--EIPAYGLQC-----TEAVPL----DSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred cccCCceEEEeccccchH-----HHHHHHhhc--CCcchhhhc-----cccCCc----chHHHHHHHHHHHHHhcCCCCC
Confidence 345678999999765542 345555442 222222221 111122 3344444433333333 34568
Q ss_pred EEEEEeChhHHHHHHHHhh--cCCccceEEEeccC
Q 028834 99 LILAGKSMGSRVSCMVACK--EDIAASAVLCLGYP 131 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~--~p~~i~~lv~~~~~ 131 (203)
.-|+|+|+|+.+++++|.. ..+..+.+|++++.
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 9999999999999999976 33455668888754
No 229
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=90.08 E-value=3.4 Score=35.25 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=62.4
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-------------------CCeEEEEEecc-CCCCCCCC----CCCcH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-------------------DAVEVVTFDYP-YIAGGKRK----APPKA 76 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-------------------~g~~v~~~d~~-g~g~g~~~----~~~~~ 76 (203)
..+|+||++-|+.|.++ +.-++.++. +-..++-+|.| |.|-+-+. .....
T Consensus 71 ~~dPlvLWLnGGPGCSS------l~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D 144 (454)
T KOG1282|consen 71 ETDPLVLWLNGGPGCSS------LGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGD 144 (454)
T ss_pred CCCCEEEEeCCCCCccc------hhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCc
Confidence 45799999999988873 223333321 12346666777 32211111 12334
Q ss_pred HHHHHHHHHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHHhh----c------CCccceEEE
Q 028834 77 EKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------DIAASAVLC 127 (203)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a~~----~------p~~i~~lv~ 127 (203)
....++.-+.+..+.+++ ..+++.|.|-|.+|..+-.+|.. + .-+++|+++
T Consensus 145 ~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~I 208 (454)
T KOG1282|consen 145 DGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAI 208 (454)
T ss_pred HHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEe
Confidence 456677777777777664 56789999999999666655544 2 236777774
No 230
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=88.37 E-value=1.8 Score=37.12 Aligned_cols=112 Identities=19% Similarity=0.179 Sum_probs=59.0
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccC--CC----CCCCCCCCcHHH-HHHHHHHHHHHHHHh
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPY--IA----GGKRKAPPKAEK-LVEFHTDVVKGAVAK 93 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g--~g----~g~~~~~~~~~~-~~~~~~~~i~~~~~~ 93 (203)
.+..++|++-|.|.-.+++-+.-+.--+-....+..|+.++||- +| .+..+.+....- ........+++-+.+
T Consensus 133 ~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~a 212 (601)
T KOG4389|consen 133 YNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAA 212 (601)
T ss_pred CCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHH
Confidence 45568999999887666544322322221112678888899883 11 122222222111 111222233333444
Q ss_pred CC--CCcEEEEEeChhHHHHHHHHhhc--CCccceEEEeccCC
Q 028834 94 FP--GHPLILAGKSMGSRVSCMVACKE--DIAASAVLCLGYPL 132 (203)
Q Consensus 94 ~~--~~~i~l~GhS~Gg~la~~~a~~~--p~~i~~lv~~~~~~ 132 (203)
++ .++|.|+|-|.|+.-+..-.... ...++..|+-++.+
T Consensus 213 FGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 213 FGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred hCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 54 45799999999987665444331 12455556555444
No 231
>PLN02209 serine carboxypeptidase
Probab=87.58 E-value=4.7 Score=34.31 Aligned_cols=109 Identities=11% Similarity=0.096 Sum_probs=63.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHH---H-H---------hc-------CCCeEEEEEecc-CCCCCCCC---CCCcH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDM---L-G---------KA-------LDAVEVVTFDYP-YIAGGKRK---APPKA 76 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~---~-~---------~l-------~~g~~v~~~d~~-g~g~g~~~---~~~~~ 76 (203)
...|+++++-|+.|.++- + ..+.+. . . .+ .+...++-+|.| |.|-+... .....
T Consensus 66 ~~~Pl~lWlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~ 143 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCL-S-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSD 143 (437)
T ss_pred CCCCEEEEECCCCcHHHh-h-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCC
Confidence 457999999998877631 1 011111 0 0 00 123467778866 33322111 11122
Q ss_pred HHHHHHHHHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHHhh----c------CCccceEEEeccC
Q 028834 77 EKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------DIAASAVLCLGYP 131 (203)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a~~----~------p~~i~~lv~~~~~ 131 (203)
....+++.+.++.+.+.+ ..++++|+|.|.||..+..+|.. . +-.++|+++.++.
T Consensus 144 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 144 TSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcc
Confidence 244567777777777665 34689999999999877777654 1 2367788866653
No 232
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=86.76 E-value=3.5 Score=33.48 Aligned_cols=108 Identities=17% Similarity=0.284 Sum_probs=69.6
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHH---hc-------CCCeEEEEEeccC-CC----CCCCCCCCcHHHHHHHHHH
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLG---KA-------LDAVEVVTFDYPY-IA----GGKRKAPPKAEKLVEFHTD 85 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~---~l-------~~g~~v~~~d~~g-~g----~g~~~~~~~~~~~~~~~~~ 85 (203)
..+|..+++.|..+.++..+ ..|.+.-. .+ .+...++.+|.|- .| +|.+.......+...|+.+
T Consensus 29 s~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred cCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 46799999999887765433 23333211 11 1345678888883 22 3344444555566677777
Q ss_pred HHHHHHHh---CCCCcEEEEEeChhHHHHHHHHhhc---------CCccceEEEec
Q 028834 86 VVKGAVAK---FPGHPLILAGKSMGSRVSCMVACKE---------DIAASAVLCLG 129 (203)
Q Consensus 86 ~i~~~~~~---~~~~~i~l~GhS~Gg~la~~~a~~~---------p~~i~~lv~~~ 129 (203)
.++.+... +...+.+|+--|.||-+|..++... ..++.++++=+
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGD 163 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGD 163 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccC
Confidence 77777654 4667999999999999999888762 23566676533
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=84.57 E-value=5.7 Score=32.20 Aligned_cols=75 Identities=12% Similarity=0.107 Sum_probs=47.3
Q ss_pred EEEEEecc-CCCCCCCCC---CCcHHHHHHHHHHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHHhh----c------
Q 028834 56 EVVTFDYP-YIAGGKRKA---PPKAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------ 118 (203)
Q Consensus 56 ~v~~~d~~-g~g~g~~~~---~~~~~~~~~~~~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a~~----~------ 118 (203)
.++-+|.| |.|-+-... ........+++...++.+.+.+ ..++.+|.|-|.||..+..+|.. .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 46788888 433221111 1112233477777777777664 56789999999999988777764 1
Q ss_pred CCccceEEEecc
Q 028834 119 DIAASAVLCLGY 130 (203)
Q Consensus 119 p~~i~~lv~~~~ 130 (203)
+-.++|+++-.+
T Consensus 83 ~inLkGi~IGNg 94 (319)
T PLN02213 83 PINLQGYMLGNP 94 (319)
T ss_pred ceeeeEEEeCCC
Confidence 236778875444
No 234
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=84.26 E-value=0.91 Score=27.40 Aligned_cols=18 Identities=28% Similarity=0.444 Sum_probs=9.5
Q ss_pred CCCCccEEEEEcCCCCCC
Q 028834 19 DTSSSPVVVFAHGAGAPS 36 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~ 36 (203)
....+|+|++.||+..++
T Consensus 39 ~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 39 QNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp TTTT--EEEEE--TT--G
T ss_pred cCCCCCcEEEECCcccCh
Confidence 345789999999998876
No 235
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=84.09 E-value=2.5 Score=36.29 Aligned_cols=84 Identities=15% Similarity=0.083 Sum_probs=54.3
Q ss_pred HhcCCCeEEEEEeccCCCCCC---CCCCCcHH-------HHHHHHHHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHH
Q 028834 49 GKALDAVEVVTFDYPYIAGGK---RKAPPKAE-------KLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 49 ~~l~~g~~v~~~d~~g~g~g~---~~~~~~~~-------~~~~~~~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a 115 (203)
..+..||.+++-|-=..+... .....+.+ ..+.....+-+.+++.+ ..+.-...|.|.||.-++..|
T Consensus 54 ~~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~A 133 (474)
T PF07519_consen 54 TALARGYATASTDSGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAA 133 (474)
T ss_pred hhhhcCeEEEEecCCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHH
Confidence 344579999999964322111 11111111 12233344444555553 345789999999999999999
Q ss_pred hhcCCccceEEEeccCC
Q 028834 116 CKEDIAASAVLCLGYPL 132 (203)
Q Consensus 116 ~~~p~~i~~lv~~~~~~ 132 (203)
.++|+.++|+|.-+|.+
T Consensus 134 QryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 134 QRYPEDFDGILAGAPAI 150 (474)
T ss_pred HhChhhcCeEEeCCchH
Confidence 99999999999877654
No 236
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=83.15 E-value=4.7 Score=33.44 Aligned_cols=101 Identities=13% Similarity=0.068 Sum_probs=66.1
Q ss_pred HHHHHHHHHhC---CCCcEEEEEeChhHHHHHHHHhhcCCccceEEEeccCCCCCCc-----------------------
Q 028834 84 TDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKGMNG----------------------- 137 (203)
Q Consensus 84 ~~~i~~~~~~~---~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~~~~~~~~~----------------------- 137 (203)
.+.++++.+.. ..++.++.|.|-=|-.+...|... .||++++-+..++..+..
T Consensus 156 MD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~ 234 (367)
T PF10142_consen 156 MDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNE 234 (367)
T ss_pred HHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHh
Confidence 44555555544 567899999999999999999954 699999866433211000
Q ss_pred ----cc-------------hhhhhhccCCCEEEEEeCCCCCCChHHHHHHHH-HHHHHhhhcccCC
Q 028834 138 ----AV-------------RDELLLQITVPIMFVQVPFLLSLSNIIEKEFYL-LVMVLKLSKLSDL 185 (203)
Q Consensus 138 ----~~-------------~~~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~-l~~~~~~~~~~~~ 185 (203)
.. .......++.|.+++.+..|+-+.......++. |+....++.+++-
T Consensus 235 gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~ 300 (367)
T PF10142_consen 235 GITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNA 300 (367)
T ss_pred CchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCC
Confidence 00 001124568999999999999776666666654 5555555555543
No 237
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=82.52 E-value=3.4 Score=31.40 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=29.3
Q ss_pred CccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEecc
Q 028834 22 SSPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYP 63 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~ 63 (203)
.++.|.|++-++..... .|....++.+.. +|..+..++.-
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~--lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAK--LGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHH--cCCeeeeeecc
Confidence 36789999998877633 366677777777 78888777654
No 238
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=79.62 E-value=9.9 Score=32.70 Aligned_cols=110 Identities=19% Similarity=0.147 Sum_probs=58.4
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHH-HhcC---------------CCeEEEEEecc-CCCCCCC---CCCCcHHHHHH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDML-GKAL---------------DAVEVVTFDYP-YIAGGKR---KAPPKAEKLVE 81 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~-~~l~---------------~g~~v~~~d~~-g~g~g~~---~~~~~~~~~~~ 81 (203)
++|+++++-|+.|+++-+. .+-..- ..+. ....++-+|.| |.|.+.+ +...+....-+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g--~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTG--LLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhh--hhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 5899999999998874211 111110 0000 12346667755 4332222 11122222223
Q ss_pred HHHH---HHHHHHHhCC--CCcEEEEEeChhHHHHHHHHhhcC---CccceEEEeccCCC
Q 028834 82 FHTD---VVKGAVAKFP--GHPLILAGKSMGSRVSCMVACKED---IAASAVLCLGYPLK 133 (203)
Q Consensus 82 ~~~~---~i~~~~~~~~--~~~i~l~GhS~Gg~la~~~a~~~p---~~i~~lv~~~~~~~ 133 (203)
|+.. .+.+...++. .++.+|+|-|.||.-+..+|..-- ....+++.+++.+.
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 3333 3333333332 358999999999999888887632 24667776665443
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=77.58 E-value=15 Score=24.44 Aligned_cols=44 Identities=20% Similarity=0.261 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChh--HHHHHHHHhhcCCccceEE
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMG--SRVSCMVACKEDIAASAVL 126 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~G--g~la~~~a~~~p~~i~~lv 126 (203)
=...+..+++.+...+.+|+|-|-- -.+-..++.++|++|.++.
T Consensus 51 K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~ 96 (100)
T PF09949_consen 51 KRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIY 96 (100)
T ss_pred HHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEE
Confidence 3446777778888899999997732 3344567778999999875
No 240
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=77.49 E-value=18 Score=27.97 Aligned_cols=92 Identities=16% Similarity=0.103 Sum_probs=47.8
Q ss_pred CccEEEEEcCCCCCCC-chHHHHHHHHHHhcCCCeEEEEEeccCCC----CCCCC--CC-CcHHHHHHHHHH-HHHHHH-
Q 028834 22 SSPVVVFAHGAGAPSS-SDWMIKWKDMLGKALDAVEVVTFDYPYIA----GGKRK--AP-PKAEKLVEFHTD-VVKGAV- 91 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~l~~g~~v~~~d~~g~g----~g~~~--~~-~~~~~~~~~~~~-~i~~~~- 91 (203)
..+.|+|++-+..... ..|...++..+.. .|+.+..++.+..- ..... .. .......+.+.+ .+...+
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~--lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~ 107 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAP--LGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIR 107 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHH--CCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHH
Confidence 4567999999875432 3445556666666 68888877755310 00000 00 111123333322 122222
Q ss_pred HhCCCCcEEEEEeChhHHHHHHHHh
Q 028834 92 AKFPGHPLILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 92 ~~~~~~~i~l~GhS~Gg~la~~~a~ 116 (203)
+... +-..++|.|.|+.++.....
T Consensus 108 ~~~~-~G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 108 EAVK-NGTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred HHHH-CCCEEEEECHHHHhhhccce
Confidence 2222 23789999999988665443
No 241
>PRK12467 peptide synthase; Provisional
Probab=75.38 E-value=27 Score=38.30 Aligned_cols=98 Identities=12% Similarity=0.051 Sum_probs=57.1
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
.+.+++.|...+... .+..+...+..+..++.+..++..... ............+.+.+.+. ....+..+.
T Consensus 3692 ~~~l~~~h~~~r~~~-----~~~~l~~~l~~~~~~~~l~~~~~~~d~-~~~~~~~~~~~~y~~~~~~~---~~~~p~~l~ 3762 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-----DYEPLAVILEGDRHVLGLTCRHLLDDG-WQDTSLQAMAVQYADYILWQ---QAKGPYGLL 3762 (3956)
T ss_pred ccceeeechhhcchh-----hhHHHHHHhCCCCcEEEEecccccccc-CCccchHHHHHHHHHHHHHh---ccCCCeeee
Confidence 355999999876642 233333333356778888777642111 12223333444444444332 234579999
Q ss_pred EeChhHHHHHHHHhh---cCCccceEEEec
Q 028834 103 GKSMGSRVSCMVACK---EDIAASAVLCLG 129 (203)
Q Consensus 103 GhS~Gg~la~~~a~~---~p~~i~~lv~~~ 129 (203)
|+|+||.++.+++.. ..+.+.-+.++.
T Consensus 3763 g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3763 GWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred eeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 999999999988875 334455554544
No 242
>PF03283 PAE: Pectinacetylesterase
Probab=74.53 E-value=9.1 Score=31.70 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHh-C-CCCcEEEEEeChhHHHHHHHHhh
Q 028834 81 EFHTDVVKGAVAK-F-PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 81 ~~~~~~i~~~~~~-~-~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
.-+.+++++++.. + +.++++|.|.|.||.-++..+..
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 3456677777776 4 45689999999999999876544
No 243
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=72.22 E-value=2 Score=33.31 Aligned_cols=32 Identities=13% Similarity=0.072 Sum_probs=22.5
Q ss_pred hccC-CCEEEEEeCCCCCCChHHHHHHHHHHHH
Q 028834 145 LQIT-VPIMFVQVPFLLSLSNIIEKEFYLLVMV 176 (203)
Q Consensus 145 ~~~~-~P~l~~~g~~d~~~~~~~~~~~~~l~~~ 176 (203)
..+. +|.+++||.+|...+.......|.....
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~ 260 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLRDAEDLYEAARE 260 (299)
T ss_pred hhcCCcceEEEecCCCcccchhhhHHHHhhhcc
Confidence 3444 7999999999987776666666654433
No 244
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=72.12 E-value=38 Score=25.25 Aligned_cols=40 Identities=15% Similarity=0.124 Sum_probs=30.5
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEec
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY 62 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~ 62 (203)
..++.+||+-|..++.-++.-....+.+.. .|+.++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~--~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFA--KGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHH--cCCeEEEecC
Confidence 456789999999988766655555565555 8999999983
No 245
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.90 E-value=35 Score=28.18 Aligned_cols=104 Identities=11% Similarity=0.120 Sum_probs=56.1
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC--CCCcEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--PGHPLI 100 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~i~ 100 (203)
+| |+.+=|+.+.... ++..+...... .|+.++.+-.|-.. ..................+..+.+.+ +..+++
T Consensus 39 k~-Iv~~~gWag~~~r-~l~ky~~~Yq~--~g~~~~~~tap~~~--~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~ 112 (350)
T KOG2521|consen 39 KP-IVVLLGWAGAIDR-NLMKYSKIYQD--KGYIVVRITAPCPS--VFLSASRRILSLSLASTRLSELLSDYNSDPCPII 112 (350)
T ss_pred cc-EEEEeeeccccch-hHHHHHHHHhc--CCceEEEecCcccc--cccccccccchhhHHHHHHHHHhhhccCCcCceE
Confidence 35 5555565556544 33344444433 79999888777521 11111112233334444555555544 466888
Q ss_pred EEEeChhHHHHHHHHh-h---c-C---CccceEEEeccCC
Q 028834 101 LAGKSMGSRVSCMVAC-K---E-D---IAASAVLCLGYPL 132 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~-~---~-p---~~i~~lv~~~~~~ 132 (203)
+--+|+||...+.... + + | +...+++..+.|.
T Consensus 113 fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~ 152 (350)
T KOG2521|consen 113 FHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPA 152 (350)
T ss_pred EEEecCCceeehHHHHHHHhhcCchhHhhcCCceEecccc
Confidence 8899999987765441 1 1 2 2455566555443
No 246
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=69.20 E-value=36 Score=23.71 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=16.2
Q ss_pred CCCCCccEEEEEcCCCCCCC
Q 028834 18 DDTSSSPVVVFAHGAGAPSS 37 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~ 37 (203)
...+.+|+|+-+||..|..-
T Consensus 47 ~~~p~KpLVlSfHG~tGtGK 66 (127)
T PF06309_consen 47 NPNPRKPLVLSFHGWTGTGK 66 (127)
T ss_pred CCCCCCCEEEEeecCCCCcH
Confidence 34577899999999988863
No 247
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=64.63 E-value=34 Score=29.57 Aligned_cols=87 Identities=14% Similarity=0.094 Sum_probs=55.7
Q ss_pred EEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 028834 27 VFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (203)
Q Consensus 27 v~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS 105 (203)
+|=-|+|.+... --...+.... +||.|+.+|-.|+- .. -+.++..+..+++....+.|+.+|--
T Consensus 442 lfekGYgkd~a~----vak~AI~~a~~~gfDVvLiDTAGR~------~~-----~~~lm~~l~k~~~~~~pd~i~~vgea 506 (587)
T KOG0781|consen 442 LFEKGYGKDAAG----VAKEAIQEARNQGFDVVLIDTAGRM------HN-----NAPLMTSLAKLIKVNKPDLILFVGEA 506 (587)
T ss_pred HHhhhcCCChHH----HHHHHHHHHHhcCCCEEEEeccccc------cC-----ChhHHHHHHHHHhcCCCceEEEehhh
Confidence 455677766421 2333444443 89999999998741 11 12344466677777778889999988
Q ss_pred hhHHHHHHHHhh---------cCCccceEEEe
Q 028834 106 MGSRVSCMVACK---------EDIAASAVLCL 128 (203)
Q Consensus 106 ~Gg~la~~~a~~---------~p~~i~~lv~~ 128 (203)
.=|.-++.-+.+ .|-.|+++++-
T Consensus 507 lvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 507 LVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred hhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 777777765544 34568888864
No 248
>PLN02965 Probable pheophorbidase
Probab=62.37 E-value=12 Score=28.82 Aligned_cols=57 Identities=11% Similarity=-0.042 Sum_probs=32.0
Q ss_pred hhccCCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhcccCCC----CCCchhhhhhhhhh
Q 028834 144 LLQITVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLSDLW----SPSPIWFNLLLIKI 200 (203)
Q Consensus 144 ~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 200 (203)
+..+++|+++++|++|...+...........+..+...+++-- ...|.-|+.++.+|
T Consensus 189 ~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 189 PEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred hhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHH
Confidence 4468999999999999966554433322222222344444322 24555555555443
No 249
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=59.55 E-value=43 Score=29.90 Aligned_cols=67 Identities=10% Similarity=0.109 Sum_probs=39.4
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (203)
.-+.+++++||..... .+. ++-..+...|. +|..|-.+-+|+.+++.+. .....+.+.+.++++.+.
T Consensus 549 ~i~~P~LliHG~~D~~-v~~-~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~----~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 549 NIKTPLLLIHGEEDDR-VPI-EQAEQLVDALKRKGKPVELVVFPDEGHGFSR----PENRVKVLKEILDWFKRH 616 (620)
T ss_pred ccCCCEEEEeecCCcc-CCh-HHHHHHHHHHHHcCceEEEEEeCCCCcCCCC----chhHHHHHHHHHHHHHHH
Confidence 3456799999987664 332 23333444443 7888888888886666654 223444444444444443
No 250
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=58.93 E-value=19 Score=28.54 Aligned_cols=30 Identities=27% Similarity=0.293 Sum_probs=21.9
Q ss_pred HHHHHHhCCCCcEEEEEeChhHHHHHHHHh
Q 028834 87 VKGAVAKFPGHPLILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 87 i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~ 116 (203)
+.++....+.++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 334445556788999999999988876653
No 251
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=58.87 E-value=98 Score=25.18 Aligned_cols=107 Identities=10% Similarity=0.010 Sum_probs=64.1
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
.+.|.|+++-.+.++- .. ..+.....+.....|+..|+-. ...- +.......++|..+.+.+++...+. ++.
T Consensus 101 ~pdPkvLivapmsGH~-aT---LLR~TV~alLp~~~vyitDW~d--Ar~V-p~~~G~FdldDYIdyvie~~~~~Gp-~~h 172 (415)
T COG4553 101 KPDPKVLIVAPMSGHY-AT---LLRGTVEALLPYHDVYITDWVD--ARMV-PLEAGHFDLDDYIDYVIEMINFLGP-DAH 172 (415)
T ss_pred CCCCeEEEEecccccH-HH---HHHHHHHHhccccceeEeeccc--ccee-ecccCCccHHHHHHHHHHHHHHhCC-CCc
Confidence 3456777777766543 22 3455555555778888888764 1111 1122234556666666666666665 367
Q ss_pred EEEeChhHHHHH-----HHHhhcCCccceEEEeccCCCCC
Q 028834 101 LAGKSMGSRVSC-----MVACKEDIAASAVLCLGYPLKGM 135 (203)
Q Consensus 101 l~GhS~Gg~la~-----~~a~~~p~~i~~lv~~~~~~~~~ 135 (203)
+++-++=+.-.+ .-+...|......+++++|....
T Consensus 173 v~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 173 VMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred EEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 777676554333 33344677888999999998743
No 252
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=57.92 E-value=45 Score=24.11 Aligned_cols=49 Identities=12% Similarity=0.010 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhC--CCCcEEEEEeChhHHHHHHHHhhcCCccceEEE
Q 028834 79 LVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 127 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~--~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv~ 127 (203)
..+...+.+..+++.. .+.+|+++|-|..|..-+.++.-.++.+..++=
T Consensus 49 ~~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD 99 (160)
T PF08484_consen 49 RVEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVD 99 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEe
Confidence 3334444444444332 456899999999999888887766666777763
No 253
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=56.32 E-value=22 Score=28.12 Aligned_cols=28 Identities=21% Similarity=0.247 Sum_probs=21.4
Q ss_pred HHHHhCCCCcEEEEEeChhHHHHHHHHh
Q 028834 89 GAVAKFPGHPLILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 89 ~~~~~~~~~~i~l~GhS~Gg~la~~~a~ 116 (203)
++....+.++-.++|||+|-..|+.++.
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 3445567778899999999988876653
No 254
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=56.28 E-value=6.4 Score=26.73 Aligned_cols=28 Identities=11% Similarity=0.004 Sum_probs=13.2
Q ss_pred cccccccCC------CCCCCccEEEEEcCCCCCC
Q 028834 9 KRRRKNECG------DDTSSSPVVVFAHGAGAPS 36 (203)
Q Consensus 9 ~~~~~~~~~------~~~~~~~~vv~~HG~~~~~ 36 (203)
+..|++..+ ....+..++|++||..++-
T Consensus 72 ~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 72 KTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp EEEETTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred eEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 344555544 3344566799999998753
No 255
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=55.81 E-value=75 Score=22.92 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=25.8
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEecc
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYP 63 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~ 63 (203)
++.+||+-|..++.-+..-....+.+.. .|..++.+|--
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~--~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFA--RGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHH--TTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH--cCCcEEEecCc
Confidence 4789999999888744443444444444 79999999743
No 256
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=54.65 E-value=46 Score=29.53 Aligned_cols=53 Identities=9% Similarity=0.170 Sum_probs=37.3
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCcEEEEEe------ChhHHHHHHHHhhcCCccceEEEecc
Q 028834 75 KAEKLVEFHTDVVKGAVAKFPGHPLILAGK------SMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 75 ~~~~~~~~~~~~i~~~~~~~~~~~i~l~Gh------S~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
......+.+..++.+.+.. .++++++|| +.|+.+++..-+....+ .+-+.+++
T Consensus 318 rTRvRaRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 318 RTRVRARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred hHHHHHHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 3445667777777777766 568999999 67999988776665444 55565654
No 257
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=54.55 E-value=12 Score=28.13 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=30.8
Q ss_pred hhhhccCCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhcccCCCC----CCchhhhhhhhhh
Q 028834 142 ELLLQITVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLSDLWS----PSPIWFNLLLIKI 200 (203)
Q Consensus 142 ~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 200 (203)
..+.++++|+++++|++|+.+.... . ....+...+++--| ..|..++..+.+|
T Consensus 182 ~~l~~i~~P~lii~G~~D~~~~~~~---~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 238 (242)
T PRK11126 182 PALQALTFPFYYLCGERDSKFQALA---Q---QLALPLHVIPNAGHNAHRENPAAFAASLAQI 238 (242)
T ss_pred HHhhccCCCeEEEEeCCcchHHHHH---H---HhcCeEEEeCCCCCchhhhChHHHHHHHHHH
Confidence 3466789999999999997331111 0 01234555554332 5566666665543
No 258
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=53.23 E-value=14 Score=29.75 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=21.8
Q ss_pred HHHHHHhCCCCcEEEEEeChhHHHHHHHH
Q 028834 87 VKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 87 i~~~~~~~~~~~i~l~GhS~Gg~la~~~a 115 (203)
+.++++..+.++-.++|||+|=..|+.++
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 33455666778889999999988777554
No 259
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=52.39 E-value=13 Score=30.17 Aligned_cols=57 Identities=18% Similarity=-0.067 Sum_probs=35.7
Q ss_pred hhccCCCEEEEEeCCCCCCChHHHHHHHH-HHHHHhhhcccC-CC----CCCchhhhhhhhhh
Q 028834 144 LLQITVPIMFVQVPFLLSLSNIIEKEFYL-LVMVLKLSKLSD-LW----SPSPIWFNLLLIKI 200 (203)
Q Consensus 144 ~~~~~~P~l~~~g~~d~~~~~~~~~~~~~-l~~~~~~~~~~~-~~----~~~~~~~~~~~~~~ 200 (203)
+.++++|+++++|+.|...+......... +....+...++. .- -..|..|+.++.+|
T Consensus 273 l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~F 335 (343)
T PRK08775 273 PEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTA 335 (343)
T ss_pred hhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHH
Confidence 45788999999999998555443333222 322345555642 22 26788888887765
No 260
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=52.24 E-value=1.3e+02 Score=24.41 Aligned_cols=140 Identities=13% Similarity=0.140 Sum_probs=71.2
Q ss_pred CCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEec-----cCCC------------------CCCCCC-CC
Q 028834 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY-----PYIA------------------GGKRKA-PP 74 (203)
Q Consensus 19 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~-----~g~g------------------~g~~~~-~~ 74 (203)
+...+|++|++-|+.|+.-..|++.....+..-..--.|+-.|. |.-. -|.... ..
T Consensus 14 ~~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~T 93 (366)
T KOG1532|consen 14 GAIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVT 93 (366)
T ss_pred ccccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhh
Confidence 34567899999999998866776555555544111123333331 1100 111100 00
Q ss_pred ---cHHHHHHHHHHHHHHHHHhC------CCCcEEEEEeChhHHHHHHHHhh-cCCccceEEEeccCCCCCCccc-----
Q 028834 75 ---KAEKLVEFHTDVVKGAVAKF------PGHPLILAGKSMGSRVSCMVACK-EDIAASAVLCLGYPLKGMNGAV----- 139 (203)
Q Consensus 75 ---~~~~~~~~~~~~i~~~~~~~------~~~~i~l~GhS~Gg~la~~~a~~-~p~~i~~lv~~~~~~~~~~~~~----- 139 (203)
-+...+..+.+.|+...+.+ ....|=++-||..|.+..+..+. .|.-+.-+ ++.+-...+.-.
T Consensus 94 sLNLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~ptvv~Yv--vDt~rs~~p~tFMSNMl 171 (366)
T KOG1532|consen 94 SLNLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPTVVVYV--VDTPRSTSPTTFMSNML 171 (366)
T ss_pred hHHHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCeEEEEE--ecCCcCCCchhHHHHHH
Confidence 12222333334444333331 12478899999888887766554 55422222 333322211100
Q ss_pred -hhhhhhccCCCEEEEEeCCCC
Q 028834 140 -RDELLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 140 -~~~~~~~~~~P~l~~~g~~d~ 160 (203)
.-..+.+-+.|++++.-..|.
T Consensus 172 YAcSilyktklp~ivvfNK~Dv 193 (366)
T KOG1532|consen 172 YACSILYKTKLPFIVVFNKTDV 193 (366)
T ss_pred HHHHHHHhccCCeEEEEecccc
Confidence 012345678999999988886
No 261
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=52.09 E-value=14 Score=30.40 Aligned_cols=58 Identities=17% Similarity=0.013 Sum_probs=32.7
Q ss_pred hhhccCCCEEEEEeCCCCCCChHHHH--HHHHHH---HHHhhhcccCCCC----CCchhhhhhhhhh
Q 028834 143 LLLQITVPIMFVQVPFLLSLSNIIEK--EFYLLV---MVLKLSKLSDLWS----PSPIWFNLLLIKI 200 (203)
Q Consensus 143 ~~~~~~~P~l~~~g~~d~~~~~~~~~--~~~~l~---~~~~~~~~~~~~~----~~~~~~~~~~~~~ 200 (203)
.+..+++|+++++|++|+..+..... ....+. +..++.++++--| ..|--|+..+.+|
T Consensus 287 ~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~F 353 (360)
T PLN02679 287 LIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPW 353 (360)
T ss_pred HhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHH
Confidence 45678999999999999855443211 111222 2234445554332 4566666665544
No 262
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=51.11 E-value=1e+02 Score=25.11 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=21.2
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHH
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLG 49 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~ 49 (203)
.+.+.+|.++=+||+.|..-++.-+..++.+.
T Consensus 104 n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~ 135 (344)
T KOG2170|consen 104 NPNPRKPLVLSFHGWTGTGKNYVAEIIAENLY 135 (344)
T ss_pred CCCCCCCeEEEecCCCCCchhHHHHHHHHHHH
Confidence 45678999999999998874333233344443
No 263
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=51.09 E-value=28 Score=27.35 Aligned_cols=27 Identities=22% Similarity=0.223 Sum_probs=19.9
Q ss_pred HHHhCC-CCcEEEEEeChhHHHHHHHHh
Q 028834 90 AVAKFP-GHPLILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 90 ~~~~~~-~~~i~l~GhS~Gg~la~~~a~ 116 (203)
+....+ ..+-.++|||+|=..|+.++.
T Consensus 75 ~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 75 KLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 334444 778899999999987776553
No 264
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=49.97 E-value=1.3e+02 Score=24.08 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=48.2
Q ss_pred CCeEEEEEeccCCCCCCCCCC--CcHHHHHHHHHHHHHHHHHhCCC---CcEEEEEeChhHHHHHHH---HhhcCCccce
Q 028834 53 DAVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAKFPG---HPLILAGKSMGSRVSCMV---ACKEDIAASA 124 (203)
Q Consensus 53 ~g~~v~~~d~~g~g~g~~~~~--~~~~~~~~~~~~~i~~~~~~~~~---~~i~l~GhS~Gg~la~~~---a~~~p~~i~~ 124 (203)
.+..++++.|.+.....+... .........+.+.+......+.. -+++|.|-|+|+.-+... ......++.|
T Consensus 60 GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdG 139 (289)
T PF10081_consen 60 GDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDG 139 (289)
T ss_pred CCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcce
Confidence 678889998876321111111 11223334444444444455532 269999999887665543 3334568999
Q ss_pred EEEeccCCC
Q 028834 125 VLCLGYPLK 133 (203)
Q Consensus 125 lv~~~~~~~ 133 (203)
++..++|..
T Consensus 140 alw~GpP~~ 148 (289)
T PF10081_consen 140 ALWVGPPFF 148 (289)
T ss_pred EEEeCCCCC
Confidence 999998875
No 265
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=48.89 E-value=1.7e+02 Score=25.05 Aligned_cols=106 Identities=18% Similarity=0.147 Sum_probs=64.9
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEE--EEEeccC------------------CCCCCCCCCCc-----
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEV--VTFDYPY------------------IAGGKRKAPPK----- 75 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v--~~~d~~g------------------~g~g~~~~~~~----- 75 (203)
...|.||++-|.-|+.-.+....++.++.. .++.| ++.|..- ++.+....+..
T Consensus 97 ~~~P~vImmvGLQGsGKTTt~~KLA~~lkk--~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~a 174 (451)
T COG0541 97 KKPPTVILMVGLQGSGKTTTAGKLAKYLKK--KGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAA 174 (451)
T ss_pred CCCCeEEEEEeccCCChHhHHHHHHHHHHH--cCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHH
Confidence 456899999998888755666667777766 55555 4444321 11111100100
Q ss_pred ------------------HHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcC--CccceEEEe
Q 028834 76 ------------------AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED--IAASAVLCL 128 (203)
Q Consensus 76 ------------------~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p--~~i~~lv~~ 128 (203)
....-+++.+.+.++.+...+..+.++=-+|=|.-|...|.... -.+.|+|+-
T Consensus 175 l~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 175 LEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 00111233444555555567778999999999999999998743 368888863
No 266
>PRK10824 glutaredoxin-4; Provisional
Probab=48.84 E-value=84 Score=21.40 Aligned_cols=81 Identities=11% Similarity=0.075 Sum_probs=49.3
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
...++|||+.|.......+|......++..+.-.|.++ |.-. + . ++++.+......--..+|+
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~i--di~~----------d--~---~~~~~l~~~sg~~TVPQIF 75 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYV--DILQ----------N--P---DIRAELPKYANWPTFPQLW 75 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEE--EecC----------C--H---HHHHHHHHHhCCCCCCeEE
Confidence 35689999999766666777767777777743344443 4321 0 1 2333333332222234699
Q ss_pred EEEeChhHHHHHHHHhhc
Q 028834 101 LAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~ 118 (203)
|-|...||.--+.-+.+.
T Consensus 76 I~G~~IGG~ddl~~l~~~ 93 (115)
T PRK10824 76 VDGELVGGCDIVIEMYQR 93 (115)
T ss_pred ECCEEEcChHHHHHHHHC
Confidence 999999999777666553
No 267
>PRK10985 putative hydrolase; Provisional
Probab=48.29 E-value=16 Score=29.40 Aligned_cols=22 Identities=23% Similarity=0.223 Sum_probs=18.0
Q ss_pred hhhhccCCCEEEEEeCCCCCCC
Q 028834 142 ELLLQITVPIMFVQVPFLLSLS 163 (203)
Q Consensus 142 ~~~~~~~~P~l~~~g~~d~~~~ 163 (203)
..+..+++|+++++|++|+...
T Consensus 249 ~~l~~i~~P~lii~g~~D~~~~ 270 (324)
T PRK10985 249 PLLNQIRKPTLIIHAKDDPFMT 270 (324)
T ss_pred HHHhCCCCCEEEEecCCCCCCC
Confidence 3467889999999999999544
No 268
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=48.22 E-value=35 Score=28.59 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=35.1
Q ss_pred hhhhccCCCEEEEEeCCCCCCChHHHHHHHH-HHH---HHhhhcccC-CCC----CCchhhhhhhhhh
Q 028834 142 ELLLQITVPIMFVQVPFLLSLSNIIEKEFYL-LVM---VLKLSKLSD-LWS----PSPIWFNLLLIKI 200 (203)
Q Consensus 142 ~~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~-l~~---~~~~~~~~~-~~~----~~~~~~~~~~~~~ 200 (203)
..+..+++|+++++|+.|..++......... ++. ..++..+++ --| ..|..++..+.+|
T Consensus 317 ~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~F 384 (389)
T PRK06765 317 EALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEF 384 (389)
T ss_pred HHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHH
Confidence 3466789999999999999776554443322 221 233444543 222 4566666665554
No 269
>PLN02511 hydrolase
Probab=48.12 E-value=9.3 Score=31.82 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=18.2
Q ss_pred hhhccCCCEEEEEeCCCCCCCh
Q 028834 143 LLLQITVPIMFVQVPFLLSLSN 164 (203)
Q Consensus 143 ~~~~~~~P~l~~~g~~d~~~~~ 164 (203)
.+..+++|+++++|++|+..+.
T Consensus 293 ~L~~I~vPtLiI~g~dDpi~p~ 314 (388)
T PLN02511 293 SIKHVRVPLLCIQAANDPIAPA 314 (388)
T ss_pred hhccCCCCeEEEEcCCCCcCCc
Confidence 4677999999999999995543
No 270
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=46.97 E-value=62 Score=22.95 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=14.1
Q ss_pred HHHHHHHHHhcCCCeEEEEEeccC
Q 028834 41 MIKWKDMLGKALDAVEVVTFDYPY 64 (203)
Q Consensus 41 ~~~~~~~~~~l~~g~~v~~~d~~g 64 (203)
++.+.+.+.+ .|+.+..++...
T Consensus 2 ~~~~~~~f~~--~g~~v~~l~~~~ 23 (154)
T PF03575_consen 2 VEKFRKAFRK--LGFEVDQLDLSD 23 (154)
T ss_dssp HHHHHHHHHH--CT-EEEECCCTS
T ss_pred HHHHHHHHHH--CCCEEEEEeccC
Confidence 4566777777 677777777654
No 271
>PRK03204 haloalkane dehalogenase; Provisional
Probab=46.80 E-value=22 Score=27.99 Aligned_cols=53 Identities=13% Similarity=0.001 Sum_probs=31.2
Q ss_pred CCCEEEEEeCCCCCCChHH-HHHHHHHHHHHhhhcccCCCC----CCchhhhhhhhhh
Q 028834 148 TVPIMFVQVPFLLSLSNII-EKEFYLLVMVLKLSKLSDLWS----PSPIWFNLLLIKI 200 (203)
Q Consensus 148 ~~P~l~~~g~~d~~~~~~~-~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 200 (203)
++|+++++|++|...+... ........+...+..+++.-| ..|.-++.++..|
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~ 284 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIER 284 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHh
Confidence 8999999999998554332 222222222345555554333 6677777776654
No 272
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.05 E-value=51 Score=24.21 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=47.8
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeE-EEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVE-VVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~-v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
..+||++-|+|..++ .+..++. ..++. ++..||... .-+.+ .. .-+.|.|
T Consensus 11 d~LIvyFaGwgtpps-----~v~HLil--peN~dl~lcYDY~dl-------~ldfD---------fs------Ay~hirl 61 (214)
T COG2830 11 DHLIVYFAGWGTPPS-----AVNHLIL--PENHDLLLCYDYQDL-------NLDFD---------FS------AYRHIRL 61 (214)
T ss_pred CEEEEEEecCCCCHH-----HHhhccC--CCCCcEEEEeehhhc-------Ccccc---------hh------hhhhhhh
Confidence 347888888887653 4455542 25555 466788752 11110 01 1246889
Q ss_pred EEeChhHHHHHHHHhhcCCccceEEEecc
Q 028834 102 AGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~p~~i~~lv~~~~ 130 (203)
+.||||--+|-++.... +++..+.+.+
T Consensus 62 vAwSMGVwvAeR~lqg~--~lksatAiNG 88 (214)
T COG2830 62 VAWSMGVWVAERVLQGI--RLKSATAING 88 (214)
T ss_pred hhhhHHHHHHHHHHhhc--cccceeeecC
Confidence 99999999888888765 4566666654
No 273
>COG3933 Transcriptional antiterminator [Transcription]
Probab=45.94 E-value=83 Score=26.94 Aligned_cols=75 Identities=19% Similarity=0.150 Sum_probs=45.6
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
.-.++|+.||+.-.+ .++....++-..--+.++|+|- . ...+++.+.+.+.++..+..+=.+
T Consensus 108 ~v~vIiiAHG~sTAS------SmaevanrLL~~~~~~aiDMPL--------d----vsp~~vle~l~e~~k~~~~~~Gll 169 (470)
T COG3933 108 RVKVIIIAHGYSTAS------SMAEVANRLLGEEIFIAIDMPL--------D----VSPSDVLEKLKEYLKERDYRSGLL 169 (470)
T ss_pred ceeEEEEecCcchHH------HHHHHHHHHhhccceeeecCCC--------c----CCHHHHHHHHHHHHHhcCccCceE
Confidence 346799999986543 3677776665667789999995 2 223344444444444445445333
Q ss_pred EEeChhHHHHHHH
Q 028834 102 AGKSMGSRVSCMV 114 (203)
Q Consensus 102 ~GhS~Gg~la~~~ 114 (203)
+=--||...++.=
T Consensus 170 lLVDMGSL~~f~~ 182 (470)
T COG3933 170 LLVDMGSLTSFGS 182 (470)
T ss_pred EEEecchHHHHHH
Confidence 3337887776643
No 274
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=42.44 E-value=49 Score=24.22 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=23.2
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
+++.+.+. +...=.++|-|+||.++..++...
T Consensus 17 vl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEA-GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHc-CCCcceEEEECHHHHHHHHHHcCC
Confidence 44444443 444578999999999999999753
No 275
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=40.82 E-value=26 Score=28.39 Aligned_cols=18 Identities=22% Similarity=0.283 Sum_probs=16.4
Q ss_pred EEEEeChhHHHHHHHHhh
Q 028834 100 ILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~ 117 (203)
.+.|-|+||.+|..++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 689999999999999875
No 276
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=40.72 E-value=34 Score=27.20 Aligned_cols=39 Identities=13% Similarity=0.031 Sum_probs=23.3
Q ss_pred hcc-CCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhccc
Q 028834 145 LQI-TVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLS 183 (203)
Q Consensus 145 ~~~-~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~ 183 (203)
..+ ++|+++++|++|...+.......+......++..++
T Consensus 244 ~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~ 283 (306)
T TIGR01249 244 SKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTN 283 (306)
T ss_pred hhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEEC
Confidence 345 589999999999866554444333332233344444
No 277
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=40.64 E-value=1.4e+02 Score=22.29 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=29.6
Q ss_pred ccEEEEEcCCCCCCCchH--HHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 028834 23 SPVVVFAHGAGAPSSSDW--MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKG 89 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~--~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~ 89 (203)
+.+|+++||-.... -+. .+...+.+.+ .+..+-...++|.|+... ...++++.+.+..
T Consensus 155 ~~pi~~~hG~~D~v-vp~~~~~~~~~~L~~--~~~~v~~~~~~g~gH~i~------~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPV-VPFEWAEKTAEFLKA--AGANVEFHEYPGGGHEIS------PEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SS-STHHHHHHHHHHHHC--TT-GEEEEEETT-SSS--------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCc-ccHHHHHHHHHHHHh--cCCCEEEEEcCCCCCCCC------HHHHHHHHHHHhh
Confidence 45699999987654 232 2333444444 566777777776433322 2455555554443
No 278
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=39.93 E-value=1.5e+02 Score=22.99 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=42.0
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC-CCCc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHP 98 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 98 (203)
.+.|+||++.|..+++-.. ....++..+. .|+.|.++..|.. . +.-...+..+-..+ ....
T Consensus 28 ~~~~vlIv~eG~DaAGKg~---~I~~l~~~lDPRg~~v~~~~~pt~----------e----E~~~p~lwRfw~~lP~~G~ 90 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGG---TIKRITEHLNPRGARVVALPKPSD----------R----ERTQWYFQRYVQHLPAAGE 90 (230)
T ss_pred cCCCEEEEEeCCCCCCchH---HHHHHHHhcCCCeeEEEeCCCCCH----------H----HHcChHHHHHHHhCCCCCe
Confidence 3469999999987765332 3555565555 8999999887641 0 11111233344444 3457
Q ss_pred EEEEEeCh
Q 028834 99 LILAGKSM 106 (203)
Q Consensus 99 i~l~GhS~ 106 (203)
|.|+=-|+
T Consensus 91 i~IF~rSw 98 (230)
T TIGR03707 91 IVLFDRSW 98 (230)
T ss_pred EEEEeCch
Confidence 88887774
No 279
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=39.86 E-value=58 Score=23.49 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
+++.+.+. +...-.+.|-|+|+..+..++...
T Consensus 16 vl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRER-GPLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 45555554 444678999999999999999864
No 280
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=39.40 E-value=17 Score=28.36 Aligned_cols=19 Identities=21% Similarity=0.195 Sum_probs=14.3
Q ss_pred CCCcEEEEEeChhHHHHHH
Q 028834 95 PGHPLILAGKSMGSRVSCM 113 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~ 113 (203)
+...|+++|||+|..=-..
T Consensus 233 ~i~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPY 251 (270)
T ss_pred CCCEEEEEeCCCchhhHHH
Confidence 4468999999999764443
No 281
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=38.82 E-value=1.7e+02 Score=21.94 Aligned_cols=89 Identities=15% Similarity=0.225 Sum_probs=47.5
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCC---------CC---CCCcHHHHHHHHHH--HH
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGK---------RK---APPKAEKLVEFHTD--VV 87 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~---------~~---~~~~~~~~~~~~~~--~i 87 (203)
..+-|+++.-..... ..+...+.+.+.. .|..+..+......... .. .-.+.....+.+.+ ..
T Consensus 28 ~~~~i~~iptA~~~~-~~~~~~~~~~~~~--lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~ 104 (210)
T cd03129 28 AGARVLFIPTASGDR-DEYGEEYRAAFER--LGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLL 104 (210)
T ss_pred CCCeEEEEeCCCCCh-HHHHHHHHHHHHH--cCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChH
Confidence 355677777766543 3334566777766 46655544433110000 00 00112234444444 33
Q ss_pred HHHHHhCCCCcEEEEEeChhHHHHHHH
Q 028834 88 KGAVAKFPGHPLILAGKSMGSRVSCMV 114 (203)
Q Consensus 88 ~~~~~~~~~~~i~l~GhS~Gg~la~~~ 114 (203)
+.+.+... +..+++|.|.|+.+....
T Consensus 105 ~~i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 105 DAILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 34444444 468999999999999886
No 282
>PRK13938 phosphoheptose isomerase; Provisional
Probab=38.17 E-value=1e+02 Score=23.13 Aligned_cols=24 Identities=13% Similarity=0.174 Sum_probs=21.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhc
Q 028834 95 PGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
.+++|+++|..-.|.+|..++.+.
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L 67 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAEL 67 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHc
Confidence 467999999999999999999875
No 283
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=37.95 E-value=58 Score=25.78 Aligned_cols=40 Identities=10% Similarity=0.274 Sum_probs=28.6
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEecc
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYP 63 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~ 63 (203)
...|+||++.|..+++-.. ....+...+. .|+.|.++.-|
T Consensus 53 ~~~~vlIv~eG~DaAGKG~---~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDG---TIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchH---HHHHHHHhcCCCeeEEEeCCCC
Confidence 3469999999987765333 3555555554 89999999655
No 284
>PRK10279 hypothetical protein; Provisional
Probab=37.86 E-value=56 Score=26.36 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=23.8
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
+++.+.+ .+...-.++|-|+|+.++..+|...
T Consensus 23 VL~aL~E-~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKK-VGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHH-cCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 4555544 3555678999999999999998753
No 285
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=37.67 E-value=1.2e+02 Score=22.86 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHH
Q 028834 79 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVS 111 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la 111 (203)
..+...+.++..++..+.-..+++=||+||...
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTG 138 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHH
T ss_pred cccccccccchhhccccccccceecccccceec
Confidence 445666667777766666678888899988743
No 286
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.39 E-value=72 Score=24.31 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=22.5
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
+++.+.+. +.+.-.+.|-|+|+.++..++...
T Consensus 18 vL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEM-GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCC
Confidence 34444333 344557999999999999999753
No 287
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=36.90 E-value=81 Score=19.87 Aligned_cols=40 Identities=10% Similarity=0.082 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHh---CCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 79 LVEFHTDVVKGAVAK---FPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~---~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
-.+.+.+.+++..++ .+.+++-++|-|-|=.+|.+++...
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 344555566666554 2456899999999999998888764
No 288
>PRK03482 phosphoglycerate mutase; Provisional
Probab=36.60 E-value=1.3e+02 Score=22.52 Aligned_cols=36 Identities=11% Similarity=0.262 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHH
Q 028834 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCM 113 (203)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~ 113 (203)
.....+.+...++.+.+....+++.+|+|. +.+...
T Consensus 122 ~~~~~~Rv~~~l~~~~~~~~~~~vliVsHg--~~i~~l 157 (215)
T PRK03482 122 MQELSDRMHAALESCLELPQGSRPLLVSHG--IALGCL 157 (215)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEeCc--HHHHHH
Confidence 344555566666666555455679999994 444433
No 289
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=36.40 E-value=1.1e+02 Score=19.33 Aligned_cols=79 Identities=20% Similarity=0.155 Sum_probs=46.0
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
..++|||..|..+..+.++.....+++.. .+.....+|... + .+.++.+...........|++
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~--~~i~y~~idv~~----------~-----~~~~~~l~~~~g~~tvP~vfi 69 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFSRKVVQILNQ--LGVDFGTFDILE----------D-----EEVRQGLKEYSNWPTFPQLYV 69 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHHHHHHHHHHH--cCCCeEEEEcCC----------C-----HHHHHHHHHHhCCCCCCEEEE
Confidence 46899999998777777777677777777 454444445431 0 112223332222212224666
Q ss_pred EEeChhHHHHHHHHhh
Q 028834 102 AGKSMGSRVSCMVACK 117 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~ 117 (203)
-|.-.||.--+..+.+
T Consensus 70 ~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 70 NGELVGGCDIVKEMHE 85 (90)
T ss_pred CCEEEeCHHHHHHHHH
Confidence 6777888876665544
No 290
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=36.37 E-value=51 Score=27.53 Aligned_cols=54 Identities=15% Similarity=-0.106 Sum_probs=31.4
Q ss_pred ccCCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhcccCCCC----CCchhhhhhhhhh
Q 028834 146 QITVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLSDLWS----PSPIWFNLLLIKI 200 (203)
Q Consensus 146 ~~~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 200 (203)
.+++|+++++|+.|............... ..++..+++--| ..|-.++..+.+|
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-~a~l~vIp~aGH~~~~E~Pe~v~~~I~~F 380 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKSS-QHKLIELPMAGHHVQEDCGEELGGIISGI 380 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHhc-CCeEEEECCCCCCcchhCHHHHHHHHHHH
Confidence 46899999999999855443333322222 234455554322 5566666666554
No 291
>COG2082 CobH Precorrin isomerase [Coenzyme metabolism]
Probab=35.90 E-value=2e+02 Score=21.99 Aligned_cols=73 Identities=18% Similarity=0.184 Sum_probs=43.5
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc-CCccceEEEeccCCCCCCccchhhhhhccCCCEEEEEeCCCC
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE-DIAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFVQVPFLL 160 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~-p~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~d~ 160 (203)
.++...++.....|+++|+.=-+++.+.=.-+. ..+.+.+ ++.|..........+.+....+|.+.+.|.+--
T Consensus 118 ~~~~~~~~~~~~~ivvIGNAPTAL~~l~elie~~~~~palv--Ig~PVGFv~AaesKe~L~~~~iP~itv~G~rGG 191 (210)
T COG2082 118 GMRLAAERGEGGAIVVIGNAPTALFELLELIEEGGIKPALV--IGVPVGFVGAAESKEALRESPIPYITVRGRRGG 191 (210)
T ss_pred HHHHHHHhcCCceEEEEeCCHHHHHHHHHHHHccCCCCcEE--EEcCCcccchHHHHHHHHhCCCCeEEEecCCCC
Confidence 344444444445899999998887776544443 1234444 444442222222334567778999999998763
No 292
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=35.78 E-value=26 Score=25.73 Aligned_cols=42 Identities=14% Similarity=0.057 Sum_probs=26.2
Q ss_pred hhhccCCCEEEEEeCCCCCCChHHHHHHHHHHHHHhhhcccC
Q 028834 143 LLLQITVPIMFVQVPFLLSLSNIIEKEFYLLVMVLKLSKLSD 184 (203)
Q Consensus 143 ~~~~~~~P~l~~~g~~d~~~~~~~~~~~~~l~~~~~~~~~~~ 184 (203)
.+..+++|+++++|+.|+..+...........+..+...+++
T Consensus 170 ~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~ 211 (230)
T PF00561_consen 170 ALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEG 211 (230)
T ss_dssp HHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETT
T ss_pred cccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCC
Confidence 356789999999999999555544444233333344444444
No 293
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=35.73 E-value=1.2e+02 Score=19.59 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=46.9
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
..++|||..|.....+.+|.....+++.. .|.....+|... . . ...+.+...........|++
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~--~~i~~~~~di~~----------~-~----~~~~~l~~~tg~~tvP~vfi 73 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKA--CGVPFAYVNVLE----------D-P----EIRQGIKEYSNWPTIPQLYV 73 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHH--cCCCEEEEECCC----------C-H----HHHHHHHHHhCCCCCCEEEE
Confidence 46889999987555566777677778877 455444555431 0 0 12222222222212224667
Q ss_pred EEeChhHHHHHHHHhhc
Q 028834 102 AGKSMGSRVSCMVACKE 118 (203)
Q Consensus 102 ~GhS~Gg~la~~~a~~~ 118 (203)
-|...||.-.+..+.+.
T Consensus 74 ~g~~iGG~ddl~~l~~~ 90 (97)
T TIGR00365 74 KGEFVGGCDIIMEMYQS 90 (97)
T ss_pred CCEEEeChHHHHHHHHC
Confidence 77889998887766554
No 294
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=35.62 E-value=1.9e+02 Score=22.55 Aligned_cols=63 Identities=21% Similarity=0.246 Sum_probs=35.0
Q ss_pred CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcE--EEEEeChhH-HHHHHHHhh
Q 028834 53 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL--ILAGKSMGS-RVSCMVACK 117 (203)
Q Consensus 53 ~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i--~l~GhS~Gg-~la~~~a~~ 117 (203)
+.-.|+.+|.+++..|.++..-.....+.-+++.+..... .+.++ .|+|++|+| +++.-+...
T Consensus 64 krpIv~lVD~~sQa~grreEllGi~~alAhla~a~a~AR~--~GHpvI~Lv~G~A~SGaFLA~GlqA~ 129 (234)
T PF06833_consen 64 KRPIVALVDVPSQAYGRREELLGINQALAHLAKAYALARL--AGHPVIGLVYGKAMSGAFLAHGLQAN 129 (234)
T ss_pred CCCEEEEEeCCccccchHHHHhhHHHHHHHHHHHHHHHHH--cCCCeEEEEecccccHHHHHHHHHhc
Confidence 5678899999987555543222233333333333333322 35564 488999755 455555443
No 295
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=34.93 E-value=71 Score=25.78 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
+++.+.+. +...=.++|-|+|+.++..++..
T Consensus 33 vL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALEEA-GIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 44444444 44455889999999999999876
No 296
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.76 E-value=97 Score=23.39 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcC
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 119 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p 119 (203)
+++.+.+. +...=.+.|.|+|+..+..++...+
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 34444443 3345589999999999999998764
No 297
>PRK10162 acetyl esterase; Provisional
Probab=34.66 E-value=2.4e+02 Score=22.62 Aligned_cols=46 Identities=15% Similarity=-0.062 Sum_probs=30.5
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCC
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKR 70 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~ 70 (203)
..|++++++|....- .+-...+.+.+.+ .|..|-...++|..++..
T Consensus 247 ~lPp~~i~~g~~D~L-~de~~~~~~~L~~--aGv~v~~~~~~g~~H~f~ 292 (318)
T PRK10162 247 DVPPCFIAGAEFDPL-LDDSRLLYQTLAA--HQQPCEFKLYPGTLHAFL 292 (318)
T ss_pred CCCCeEEEecCCCcC-cChHHHHHHHHHH--cCCCEEEEEECCCceehh
Confidence 457789999966554 2333466666666 677777778887655543
No 298
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=34.59 E-value=78 Score=24.34 Aligned_cols=36 Identities=22% Similarity=0.102 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCC-CCcEEEEEeChhHHHHHHHHhhcC
Q 028834 84 TDVVKGAVAKFP-GHPLILAGKSMGSRVSCMVACKED 119 (203)
Q Consensus 84 ~~~i~~~~~~~~-~~~i~l~GhS~Gg~la~~~a~~~p 119 (203)
.-+++.+.++.- .+.-.+.|-|+|+..+..++...+
T Consensus 15 ~GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 335566655421 123489999999999999998753
No 299
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=34.39 E-value=56 Score=22.24 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChhHHHHH
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSC 112 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~ 112 (203)
....+......++.+.|+++||+--|++..
T Consensus 45 ~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 45 VLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred HHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 444666667777888999999987776653
No 300
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=34.15 E-value=69 Score=25.68 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
+++.+ +..+...-+|.|-|+|+.++..+|..
T Consensus 29 Vl~aL-~e~gi~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKAL-EEAGIPIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHH-HHcCCCccEEEecCHHHHHHHHHHcC
Confidence 34434 33356678999999999999999985
No 301
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=34.06 E-value=1.2e+02 Score=23.18 Aligned_cols=39 Identities=18% Similarity=0.079 Sum_probs=19.8
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHH-HhcC-CCeEEEEEecc
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDML-GKAL-DAVEVVTFDYP 63 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~-~~l~-~g~~v~~~d~~ 63 (203)
.+-|+.+-|..... +.- ....+.+ ..+. .|..+-.+|++
T Consensus 26 ~~kI~~I~GSlR~~-S~n-~~la~~~~~~~~~~g~~v~~idl~ 66 (219)
T TIGR02690 26 IPRILLLYGSLRER-SYS-RLLAEEAARLLGCEGRETRIFDPP 66 (219)
T ss_pred CCEEEEEECCCCCc-chH-HHHHHHHHHHHhhcCCEEEEeCcc
Confidence 34577777754333 222 2233333 2222 47888777654
No 302
>KOG4530 consensus Predicted flavoprotein [General function prediction only]
Probab=33.97 E-value=77 Score=23.11 Aligned_cols=61 Identities=18% Similarity=0.332 Sum_probs=35.0
Q ss_pred HHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh
Q 028834 41 MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 41 ~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
.+.|++.+..+ .++..+.+.|-+ |-+ .-+.++++++-....+++..++ |.||.-.-.+..+
T Consensus 77 t~aw~~ki~~a-D~ivFvtPqYN~---gyp----------A~LKNAlD~lyheW~gKPaliv--SyGGhGGg~c~~q 137 (199)
T KOG4530|consen 77 TEAWRQKILEA-DSIVFVTPQYNF---GYP----------APLKNALDWLYHEWAGKPALIV--SYGGHGGGRCQYQ 137 (199)
T ss_pred HHHHHHHHhhc-ceEEEecccccC---CCc----------hHHHHHHHHhhhhhcCCceEEE--EecCCCCchHHHH
Confidence 46788877552 455556666653 111 1344567777666677787776 5555544444443
No 303
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=33.85 E-value=95 Score=22.72 Aligned_cols=50 Identities=14% Similarity=0.294 Sum_probs=35.1
Q ss_pred CCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChh
Q 028834 53 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMG 107 (203)
Q Consensus 53 ~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~G 107 (203)
.|+..+.+|.-..-. +........++.+.++++.+.+..++|.|+..|.|
T Consensus 39 ~Gik~li~DkDNTL~-----~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 39 KGIKALIFDKDNTLT-----PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred cCceEEEEcCCCCCC-----CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 799999999765311 11112344566777788888877779999999986
No 304
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=33.56 E-value=1.3e+02 Score=23.55 Aligned_cols=47 Identities=17% Similarity=0.247 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhhc-------CCccceEEE
Q 028834 81 EFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKE-------DIAASAVLC 127 (203)
Q Consensus 81 ~~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~~-------p~~i~~lv~ 127 (203)
+.+.+.++...+.+ ++.+++++|..-.|.++..-+.+. |..+.+++.
T Consensus 33 ~~I~~av~~~~~~l~~ggrl~~~GaGtSg~la~~da~e~~~tfg~~~~~v~~~ia 87 (257)
T cd05007 33 PQIARAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASELPPTFGTPPERVVGLIA 87 (257)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEcCcHHHHHHHHHHHhccccccCCcccceEEEe
Confidence 34444455544444 467899999999999997666553 334555554
No 305
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=33.51 E-value=2.3e+02 Score=22.09 Aligned_cols=39 Identities=13% Similarity=0.239 Sum_probs=22.6
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeE-EEEEec
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVE-VVTFDY 62 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~-v~~~d~ 62 (203)
+..+.|++++-..+.. ..+...+.+.+.. .|+. |-.++.
T Consensus 26 ~~~~rI~~iptAS~~~-~~~~~~~~~~~~~--lG~~~v~~l~i 65 (250)
T TIGR02069 26 GEDAIIVIITSASEEP-REVGERYITIFSR--LGVKEVKILDV 65 (250)
T ss_pred CCCceEEEEeCCCCCh-HHHHHHHHHHHHH--cCCceeEEEec
Confidence 4456788998776543 3334566666666 4552 444444
No 306
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=33.51 E-value=1.5e+02 Score=19.81 Aligned_cols=79 Identities=22% Similarity=0.259 Sum_probs=47.3
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEE
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (203)
...|+|+|.--+ .++......++..+.-.+.|+-+|-..+ | . ++++.+..+..+.....|+
T Consensus 12 ~~~~VVifSKs~-----C~~c~~~k~ll~~~~v~~~vvELD~~~~--g---------~---eiq~~l~~~tg~~tvP~vF 72 (104)
T KOG1752|consen 12 SENPVVIFSKSS-----CPYCHRAKELLSDLGVNPKVVELDEDED--G---------S---EIQKALKKLTGQRTVPNVF 72 (104)
T ss_pred hcCCEEEEECCc-----CchHHHHHHHHHhCCCCCEEEEccCCCC--c---------H---HHHHHHHHhcCCCCCCEEE
Confidence 346788887643 3444456666766545667777775421 1 1 3344444443332334699
Q ss_pred EEEeChhHHHHHHHHhhc
Q 028834 101 LAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 101 l~GhS~Gg~la~~~a~~~ 118 (203)
|-|.+.||.--+......
T Consensus 73 I~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 73 IGGKFIGGASDLMALHKS 90 (104)
T ss_pred ECCEEEcCHHHHHHHHHc
Confidence 999999998777666553
No 307
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=32.72 E-value=79 Score=23.71 Aligned_cols=49 Identities=20% Similarity=0.122 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeCh----hHHHHHHHHhhcC-CccceEEEe
Q 028834 79 LVEFHTDVVKGAVAKFPGHPLILAGKSM----GSRVSCMVACKED-IAASAVLCL 128 (203)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~GhS~----Gg~la~~~a~~~p-~~i~~lv~~ 128 (203)
..+.+.+.+..+++..+ -.++|+|+|. |..++.++|.+.. ..+..++.+
T Consensus 92 ~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 92 DTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred ChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 34556666666666655 4799999998 8889999988732 245555544
No 308
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=32.30 E-value=48 Score=25.86 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCCcE-EEEEeChhHHHHHHHHhhcC
Q 028834 86 VVKGAVAKFPGHPL-ILAGKSMGSRVSCMVACKED 119 (203)
Q Consensus 86 ~i~~~~~~~~~~~i-~l~GhS~Gg~la~~~a~~~p 119 (203)
+++.+.+. +..++ .++|-|.|+.++..++....
T Consensus 16 vl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 16 VLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCc
Confidence 44445444 23224 89999999999999988743
No 309
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=32.12 E-value=95 Score=24.15 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=22.5
Q ss_pred HHHHHHHhCC-CCcEEEEEeChhHHHHHHHHhhcC
Q 028834 86 VVKGAVAKFP-GHPLILAGKSMGSRVSCMVACKED 119 (203)
Q Consensus 86 ~i~~~~~~~~-~~~i~l~GhS~Gg~la~~~a~~~p 119 (203)
+++.+.+... ...=.+.|-|+|+..+..++...+
T Consensus 18 Vl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 18 VAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 4555555431 111239999999999999987643
No 310
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=31.82 E-value=69 Score=25.98 Aligned_cols=29 Identities=21% Similarity=0.171 Sum_probs=21.1
Q ss_pred HHHHHhC-CCCcEEEEEeChhHHHHHHHHh
Q 028834 88 KGAVAKF-PGHPLILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 88 ~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~ 116 (203)
+.+.+.. +..+.++.|||+|=+.|+..+.
T Consensus 75 ~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 75 RVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 3344434 5678899999999888886665
No 311
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=31.60 E-value=57 Score=25.95 Aligned_cols=42 Identities=17% Similarity=0.040 Sum_probs=29.1
Q ss_pred HHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCCccceEE
Q 028834 85 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 126 (203)
Q Consensus 85 ~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~i~~lv 126 (203)
-+++.++......==.++|-|+|+.-...+.++.+.+-+.++
T Consensus 28 GVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 28 GVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 366777744322123678999999999999998776555554
No 312
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=31.55 E-value=53 Score=27.91 Aligned_cols=36 Identities=28% Similarity=0.372 Sum_probs=25.3
Q ss_pred HHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCCc
Q 028834 85 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIA 121 (203)
Q Consensus 85 ~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~~ 121 (203)
-+++.+.++ +..+=++.|-|+|+.+|..++...++.
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 355555554 333458999999999999998865433
No 313
>PRK04148 hypothetical protein; Provisional
Probab=31.12 E-value=1.4e+02 Score=21.00 Aligned_cols=23 Identities=9% Similarity=0.044 Sum_probs=18.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHhh
Q 028834 95 PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 95 ~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
...++..+|-..|..+|..++..
T Consensus 16 ~~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 16 KNKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred cCCEEEEEEecCCHHHHHHHHHC
Confidence 34579999999888888888764
No 314
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=31.11 E-value=84 Score=27.70 Aligned_cols=25 Identities=20% Similarity=0.131 Sum_probs=20.3
Q ss_pred HhCCCCcEEEEEeChhHHHHHHHHh
Q 028834 92 AKFPGHPLILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 92 ~~~~~~~i~l~GhS~Gg~la~~~a~ 116 (203)
+..+.++-.++|||+|=..|+..+-
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhC
Confidence 4677888999999999877776664
No 315
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=29.22 E-value=1.6e+02 Score=21.09 Aligned_cols=32 Identities=25% Similarity=0.180 Sum_probs=22.3
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
.++.+.+. +...=.++|-|.|+.++..++...
T Consensus 18 vl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 34444333 333458999999999999998753
No 316
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.20 E-value=80 Score=23.31 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHH
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a 115 (203)
....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 445777888888999999999997777666553
No 317
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=28.87 E-value=1e+02 Score=24.46 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=22.5
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhh
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
+++.+.+. +..-=.+.|-|+|+.++..+|..
T Consensus 28 VL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEA-GIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHc-CCCccEEEEECHHHHHHHHHHcC
Confidence 44555443 44445889999999999999876
No 318
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=28.55 E-value=1.7e+02 Score=20.49 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHH
Q 028834 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a 115 (203)
.......+......++.+.|+++||+-=|++...+.
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 345556777788888899999999997777765443
No 319
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=28.54 E-value=1.9e+02 Score=21.46 Aligned_cols=37 Identities=11% Similarity=0.027 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhh
Q 028834 81 EFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 81 ~~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
+.+.++++.+.+.+ ..++|+++|..-.+.+|..++..
T Consensus 28 ~~i~~a~~~i~~al~~~~rI~i~G~G~S~~~A~~~a~~ 65 (192)
T PRK00414 28 HAIQRAAVLIADSFKAGGKVLSCGNGGSHCDAMHFAEE 65 (192)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHH
Confidence 34444444444443 46789999999999988888743
No 320
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=28.39 E-value=1.7e+02 Score=23.47 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhh
Q 028834 82 FHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 82 ~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
.+.+.++.+.+.+ ...+++++|..-.|.++..-+..
T Consensus 47 ~I~~av~~~~~~l~~ggrI~~~GaGtSg~la~~da~e 83 (299)
T PRK05441 47 QIAAAVDAAAAALRQGGRLIYIGAGTSGRLGVLDASE 83 (299)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHh
Confidence 3444444444444 45789999999999999665554
No 321
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.19 E-value=57 Score=23.15 Aligned_cols=20 Identities=20% Similarity=0.280 Sum_probs=16.8
Q ss_pred cEEEEEeChhHHHHHHHHhh
Q 028834 98 PLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~ 117 (203)
--.+.|-|.||.++..++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 45899999999999888876
No 322
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=28.15 E-value=1.7e+02 Score=21.13 Aligned_cols=53 Identities=17% Similarity=0.076 Sum_probs=30.8
Q ss_pred HHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCc-EEEEEeChhHHH
Q 028834 45 KDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRV 110 (203)
Q Consensus 45 ~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-i~l~GhS~Gg~l 110 (203)
..++..+..|..|++.|.+|. . ...+.+++.++.+... + ++ .++||=|.|=.-
T Consensus 58 ~~il~~i~~~~~vi~Ld~~Gk-------~----~sSe~fA~~l~~~~~~-G-~~i~f~IGG~~Gl~~ 111 (155)
T COG1576 58 EAILAAIPKGSYVVLLDIRGK-------A----LSSEEFADFLERLRDD-G-RDISFLIGGADGLSE 111 (155)
T ss_pred HHHHHhcCCCCeEEEEecCCC-------c----CChHHHHHHHHHHHhc-C-CeEEEEEeCcccCCH
Confidence 344455567888889998873 1 2223455555555444 2 34 567777777333
No 323
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=28.04 E-value=3.8e+02 Score=22.79 Aligned_cols=83 Identities=14% Similarity=0.107 Sum_probs=49.9
Q ss_pred HHHHHHHhcCCCeEEEEEeccCCCCCCCC--------------------CCCcHHHHHHHHHHHHHHHHHhC----CCCc
Q 028834 43 KWKDMLGKALDAVEVVTFDYPYIAGGKRK--------------------APPKAEKLVEFHTDVVKGAVAKF----PGHP 98 (203)
Q Consensus 43 ~~~~~~~~l~~g~~v~~~d~~g~g~g~~~--------------------~~~~~~~~~~~~~~~i~~~~~~~----~~~~ 98 (203)
..++.+.. .|..++.+|.--.+..... ...+....++.+.+....++..+ ..+-
T Consensus 19 yl~~~i~~--~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i~G 96 (403)
T PF06792_consen 19 YLRDQIEA--QGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKIDG 96 (403)
T ss_pred HHHHHHHH--CCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCccE
Confidence 34555555 8999999997543211110 00112233333333333333332 2345
Q ss_pred EEEEEeChhHHHHHHHHhhcCCccceEEE
Q 028834 99 LILAGKSMGSRVSCMVACKEDIAASAVLC 127 (203)
Q Consensus 99 i~l~GhS~Gg~la~~~a~~~p~~i~~lv~ 127 (203)
|+-+|=|.|..++...++..|-.+-+++.
T Consensus 97 vi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 97 VIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred EEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 78888899999999999998888888874
No 324
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=27.74 E-value=63 Score=27.29 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC
Q 028834 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI 120 (203)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~ 120 (203)
.-+++.+.++ +..+=++.|-|+|+.++..++...++
T Consensus 83 ~GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 83 FGVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred HHHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 3455666555 34455799999999999999986443
No 325
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=27.32 E-value=1.4e+02 Score=21.60 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhc
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
.++.+.+. +...=.+.|-|.|+..+..++...
T Consensus 18 vl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 18 VLRALEEE-GIEIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCC
Confidence 34444333 334558999999999999998864
No 326
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=27.08 E-value=3e+02 Score=21.36 Aligned_cols=104 Identities=15% Similarity=0.187 Sum_probs=53.3
Q ss_pred EEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEec--c-CCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEE
Q 028834 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY--P-YIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (203)
Q Consensus 25 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~--~-g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (203)
++|++-|+.+++-+.+-.+.++.++. .++.|+...- . +.-...+ .+.-.+...+...+....++.+.-...++|
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~--~i~~vi~l~kdy~~~i~~DEs-lpi~ke~yres~~ks~~rlldSalkn~~VI 78 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQ--EIWRVIHLEKDYLRGILWDES-LPILKEVYRESFLKSVERLLDSALKNYLVI 78 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHH--hhhhccccchhhhhheecccc-cchHHHHHHHHHHHHHHHHHHHHhcceEEE
Confidence 37899999998866776667776665 6777766643 2 2211112 111111222222222333443322244555
Q ss_pred EE-----eChhHHHHHHHHhhcCCccceEEEeccCCC
Q 028834 102 AG-----KSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (203)
Q Consensus 102 ~G-----hS~Gg~la~~~a~~~p~~i~~lv~~~~~~~ 133 (203)
+- -||-=.++...... ..--++|.+..|..
T Consensus 79 vDdtNYyksmRrqL~ceak~~--~tt~ciIyl~~plD 113 (261)
T COG4088 79 VDDTNYYKSMRRQLACEAKER--KTTWCIIYLRTPLD 113 (261)
T ss_pred EecccHHHHHHHHHHHHHHhc--CCceEEEEEccCHH
Confidence 54 34555555444433 35677887766543
No 327
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=26.72 E-value=2.8e+02 Score=21.95 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=44.1
Q ss_pred EEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCC--CCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 25 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
++|++-|..+++-+.....+...+.. .+..|..++.-..+...... ..........+...+...+ ..+.|+|+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~--~~~~v~~i~~~~~~~~~~~y~~~~~Ek~~R~~l~s~v~r~l---s~~~iVI~ 76 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEE--KGKEVVIISDDSLGIDRNDYADSKKEKEARGSLKSAVERAL---SKDTIVIL 76 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHH--TT--EEEE-THHHH-TTSSS--GGGHHHHHHHHHHHHHHHH---TT-SEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHh--cCCEEEEEcccccccchhhhhchhhhHHHHHHHHHHHHHhh---ccCeEEEE
Confidence 47889999888755665666666666 77888777644321111111 1112223334444444433 44577776
Q ss_pred EeCh---hHHHHHHHHhhcCCccceEEEeccCC
Q 028834 103 GKSM---GSRVSCMVACKEDIAASAVLCLGYPL 132 (203)
Q Consensus 103 GhS~---Gg~la~~~a~~~p~~i~~lv~~~~~~ 132 (203)
=.-+ |=.--++.+++.-.---++|.+..+.
T Consensus 77 Dd~nYiKg~RYelyclAr~~~~~~c~i~~~~~~ 109 (270)
T PF08433_consen 77 DDNNYIKGMRYELYCLARAYGTTFCVIYCDCPL 109 (270)
T ss_dssp -S---SHHHHHHHHHHHHHTT-EEEEEEEE--H
T ss_pred eCCchHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 4221 22223333344333344556555543
No 328
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=26.37 E-value=3.2e+02 Score=23.05 Aligned_cols=91 Identities=14% Similarity=0.152 Sum_probs=51.0
Q ss_pred CccEEEEEcCCCCCCCc--hHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcE
Q 028834 22 SSPVVVFAHGAGAPSSS--DWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~--~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (203)
+...||++||=+++... ...+.|..++.-+...--+-.+|..++|-+.. ++.-+..++.+++.. +-
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G---------leeDa~~lR~~a~~~---~~ 237 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG---------LEEDAYALRLFAEVG---PE 237 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc---------hHHHHHHHHHHHHhC---Cc
Confidence 34459999998777632 33467888776654333344556665432221 222223445554442 22
Q ss_pred EEEEeChhHHHHHHHHhhcCCccceEEEec
Q 028834 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p~~i~~lv~~~ 129 (203)
.++..|..-.++++ .+|+.++.+++
T Consensus 238 ~lva~S~SKnfgLY-----gERVGa~~vva 262 (396)
T COG1448 238 LLVASSFSKNFGLY-----GERVGALSVVA 262 (396)
T ss_pred EEEEehhhhhhhhh-----hhccceeEEEe
Confidence 77777776655543 46777777664
No 329
>PRK13936 phosphoheptose isomerase; Provisional
Probab=26.16 E-value=2.1e+02 Score=21.30 Aligned_cols=34 Identities=9% Similarity=0.064 Sum_probs=23.5
Q ss_pred HHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhhc
Q 028834 85 DVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKE 118 (203)
Q Consensus 85 ~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~~ 118 (203)
+.++.+.+.. ..++|.++|..-.+.+|..++.+.
T Consensus 31 ~a~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l 65 (197)
T PRK13936 31 QAVELMVQALLNEGKILACGNGGSAADAQHFSAEL 65 (197)
T ss_pred HHHHHHHHHHHCCCEEEEEeCcHhHHHHHHHHHHc
Confidence 3333333333 567899999998888888888663
No 330
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=26.09 E-value=55 Score=26.87 Aligned_cols=22 Identities=18% Similarity=0.185 Sum_probs=18.5
Q ss_pred hhhccCCCEEEEEeCCCCCCCh
Q 028834 143 LLLQITVPIMFVQVPFLLSLSN 164 (203)
Q Consensus 143 ~~~~~~~P~l~~~g~~d~~~~~ 164 (203)
.+..+..|++++|..+||.+..
T Consensus 269 ~L~~Ir~PtLii~A~DDP~~~~ 290 (345)
T COG0429 269 LLPKIRKPTLIINAKDDPFMPP 290 (345)
T ss_pred cccccccceEEEecCCCCCCCh
Confidence 4678999999999999995554
No 331
>PF01341 Glyco_hydro_6: Glycosyl hydrolases family 6; InterPro: IPR016288 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The 1,4-beta cellobiohydrolase family plays a central role in the recycling of plant biomass. The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: Endoglucanases, which cut internal beta-1,4-glucosidic bonds; Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing end of the cellulose polymer chain; and Beta-1,4-glucosidases, which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030245 cellulose catabolic process; PDB: 2BOF_X 2BOG_X 1TML_A 3RPT_A 2BOD_X 2BOE_X 1DYS_B 3VOI_A 3VOG_A 3VOJ_A ....
Probab=25.87 E-value=2.7e+02 Score=22.56 Aligned_cols=48 Identities=10% Similarity=0.175 Sum_probs=25.1
Q ss_pred eEEEEEeccCCCC--CCCCC-CCcHHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 028834 55 VEVVTFDYPYIAG--GKRKA-PPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (203)
Q Consensus 55 ~~v~~~d~~g~g~--g~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (203)
..++++++|++.+ +.|.. ........+.+.+.+...+++++..++++|
T Consensus 63 ~vlVvY~lP~RDC~a~~S~Geg~~~~~~Yk~wId~ia~~i~~~g~~~~vvI 113 (298)
T PF01341_consen 63 PVLVVYNLPNRDCAAGASAGEGADSLASYKEWIDPIAAGIKKYGDRRAVVI 113 (298)
T ss_dssp EEEEE---TTCSTTSSSTSSSGGTHHHHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred eEEEEeccCCCCccccccCCCCCCchhHHHHHHHHHHHHHHhcCCCceEEE
Confidence 4556778888754 22322 222334555566666666666677776655
No 332
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.77 E-value=94 Score=23.19 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHH
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a 115 (203)
....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 455777788888888999999997666666553
No 333
>PF15566 Imm18: Immunity protein 18
Probab=25.62 E-value=1e+02 Score=17.76 Aligned_cols=30 Identities=20% Similarity=0.157 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChhHH
Q 028834 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSR 109 (203)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~GhS~Gg~ 109 (203)
++.+++.+..+......+.+.++--|+||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 445666777777666677899999999885
No 334
>PRK11460 putative hydrolase; Provisional
Probab=25.57 E-value=3e+02 Score=20.86 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=24.2
Q ss_pred ccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEeccCCCCCC
Q 028834 23 SPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYPYIAGGK 69 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~ 69 (203)
.++++++||.....-. .......+.+.. .+..+-...+++.+++-
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~--~g~~~~~~~~~~~gH~i 193 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALIS--LGGDVTLDIVEDLGHAI 193 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHH--CCCCeEEEEECCCCCCC
Confidence 4569999997665422 112233333433 46656556667644443
No 335
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=24.65 E-value=61 Score=25.98 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=15.3
Q ss_pred EEEEeChhHHHHHHHHh
Q 028834 100 ILAGKSMGSRVSCMVAC 116 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~ 116 (203)
.++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999999875
No 336
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=24.38 E-value=4.1e+02 Score=21.98 Aligned_cols=117 Identities=13% Similarity=0.170 Sum_probs=64.0
Q ss_pred EEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC--CCCcEEEEEe
Q 028834 27 VFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--PGHPLILAGK 104 (203)
Q Consensus 27 v~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~i~l~Gh 104 (203)
|+-|..|+++.+- .|...-....+++.++.+|-.|+-+. ....++++....+-..... .+..+.++--
T Consensus 197 vI~~~~G~DpAaV---afDAi~~Akar~~DvvliDTAGRLhn-------k~nLM~EL~KI~rV~~k~~~~ap~e~llvlD 266 (340)
T COG0552 197 VISGKEGADPAAV---AFDAIQAAKARGIDVVLIDTAGRLHN-------KKNLMDELKKIVRVIKKDDPDAPHEILLVLD 266 (340)
T ss_pred EEccCCCCCcHHH---HHHHHHHHHHcCCCEEEEeCcccccC-------chhHHHHHHHHHHHhccccCCCCceEEEEEE
Confidence 4555455554321 22222222237999999999886322 2256666665544433332 1234788878
Q ss_pred ChhHHHHHHHHhhcC--CccceEEEeccCCCCCCccchhhhhhccCCCEEEE
Q 028834 105 SMGSRVSCMVACKED--IAASAVLCLGYPLKGMNGAVRDELLLQITVPIMFV 154 (203)
Q Consensus 105 S~Gg~la~~~a~~~p--~~i~~lv~~~~~~~~~~~~~~~~~~~~~~~P~l~~ 154 (203)
+.-|.-++.-|.... ..+.|+|+-=--.. ........-......|..++
T Consensus 267 AttGqnal~QAk~F~eav~l~GiIlTKlDgt-AKGG~il~I~~~l~~PI~fi 317 (340)
T COG0552 267 ATTGQNALSQAKIFNEAVGLDGIILTKLDGT-AKGGIILSIAYELGIPIKFI 317 (340)
T ss_pred cccChhHHHHHHHHHHhcCCceEEEEecccC-CCcceeeeHHHHhCCCEEEE
Confidence 999999998887642 36888886321110 11111111224567888765
No 337
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=24.35 E-value=2e+02 Score=21.13 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=33.4
Q ss_pred HHHHHHHHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHH-hCCCCcEEEEEeChhHHHHHHHHhh
Q 028834 42 IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA-KFPGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 42 ~~~~~~~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
..|.+.+... .+..+.++.|-|. .+. -+.+.++++-. .+..+++.+++.|.|+.-+......
T Consensus 59 ~~~~~~i~~a-D~li~~tPeYn~s------~pg-------~lKnaiD~l~~~~~~~Kpv~~~~~s~g~~~~~~a~~~ 121 (184)
T COG0431 59 QALREAIAAA-DGLIIATPEYNGS------YPG-------ALKNAIDWLSREALGGKPVLLLGTSGGGAGGLRAQNQ 121 (184)
T ss_pred HHHHHHHHhC-CEEEEECCccCCC------CCH-------HHHHHHHhCCHhHhCCCcEEEEecCCCchhHHHHHHH
Confidence 3455544431 5666666666541 111 22223333322 3566788888888877776655544
No 338
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=24.34 E-value=2.3e+02 Score=19.59 Aligned_cols=34 Identities=9% Similarity=0.208 Sum_probs=21.2
Q ss_pred HHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhh
Q 028834 84 TDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 84 ~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
.+..+.+.+.+ .+.+|+++|..-.+.++.+++.+
T Consensus 22 ~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~ 56 (138)
T PF13580_consen 22 EKAADLIAEALRNGGRIFVCGNGHSAAIASHFAAD 56 (138)
T ss_dssp HHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHH
Confidence 33333333333 46789999987777788888876
No 339
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=24.30 E-value=1.1e+02 Score=24.86 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=20.6
Q ss_pred hhccCCCEEEEEeCCCCCCChHHHHHHH
Q 028834 144 LLQITVPIMFVQVPFLLSLSNIIEKEFY 171 (203)
Q Consensus 144 ~~~~~~P~l~~~g~~d~~~~~~~~~~~~ 171 (203)
+..+++|+++++|++|...+.......+
T Consensus 282 l~~i~~Pvliv~G~~D~i~~~~~~~~~~ 309 (350)
T TIGR01836 282 LKNIKMPILNIYAERDHLVPPDASKALN 309 (350)
T ss_pred HHhCCCCeEEEecCCCCcCCHHHHHHHH
Confidence 5578999999999999966655444333
No 340
>PLN03006 carbonate dehydratase
Probab=24.05 E-value=1e+02 Score=24.98 Aligned_cols=32 Identities=9% Similarity=0.199 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChhHHHHHHH
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMV 114 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~ 114 (203)
....+++.+..++.+.|+++|||-=|.+...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 45678888888899999999999766666433
No 341
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.02 E-value=70 Score=25.42 Aligned_cols=18 Identities=33% Similarity=0.423 Sum_probs=16.5
Q ss_pred EEEEeChhHHHHHHHHhh
Q 028834 100 ILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~ 117 (203)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 799999999999999875
No 342
>KOG4153 consensus Fructose 1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=23.64 E-value=1.6e+02 Score=23.36 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=22.7
Q ss_pred CCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEe
Q 028834 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD 61 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d 61 (203)
.+.+|+.+.+||..+++- +.+..-+. .|..-+-+|
T Consensus 254 ~~~KpvFlVfHGgSGssv----nefktgIe---nGVvKvNvd 288 (358)
T KOG4153|consen 254 KSKKPVFLVFHGGSGSSV----NEFKTGIE---NGVVKVNVD 288 (358)
T ss_pred cccCceEEEEeCCCCccH----HHHHHHHh---cCeEEEeec
Confidence 467899999999887752 34555553 355545444
No 343
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=23.25 E-value=2.7e+02 Score=20.87 Aligned_cols=36 Identities=11% Similarity=0.148 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHHhh
Q 028834 82 FHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 82 ~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a~~ 117 (203)
.+.+..+.+.+.+ +.++|.++|..-.|.+|..++.+
T Consensus 26 ~i~~a~~~l~~~l~~~~rI~~~G~GgSa~~A~~~a~~ 62 (196)
T PRK10886 26 AISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAAS 62 (196)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECcHHHHHHHHHHHH
Confidence 3344444444443 56799999999999999999875
No 344
>PRK15219 carbonic anhydrase; Provisional
Probab=23.02 E-value=58 Score=25.43 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHH
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a 115 (203)
....+++....++.+.|+++|||-=|.+...+.
T Consensus 129 ~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 129 LLGSMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred hhhHHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 456788888888999999999997666665543
No 345
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=22.98 E-value=91 Score=24.15 Aligned_cols=20 Identities=35% Similarity=0.561 Sum_probs=17.8
Q ss_pred EEEEeChhHHHHHHHHhhcC
Q 028834 100 ILAGKSMGSRVSCMVACKED 119 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~~p 119 (203)
.+.|-|+|+..+..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998643
No 346
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.92 E-value=1.2e+02 Score=21.35 Aligned_cols=29 Identities=7% Similarity=-0.007 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChhHHHH
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVS 111 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~Gg~la 111 (203)
....+......++.+.|+++||+-=|++.
T Consensus 42 ~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 42 AIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred HHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 44456666677788899999998544443
No 347
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=22.89 E-value=2.9e+02 Score=19.66 Aligned_cols=31 Identities=3% Similarity=0.162 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 028834 75 KAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (203)
Q Consensus 75 ~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS 105 (203)
+.....+.+.+.+..+.+....++|.+++|.
T Consensus 116 s~~~~~~R~~~~~~~l~~~~~~~~vlvVsHg 146 (177)
T TIGR03162 116 SFADFYQRVSEFLEELLKAHEGDNVLIVTHG 146 (177)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCeEEEEECH
Confidence 3456667777777777776556789999886
No 348
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=22.86 E-value=81 Score=25.54 Aligned_cols=36 Identities=25% Similarity=0.160 Sum_probs=24.8
Q ss_pred cEEEEEeChhHHHHHHHHhhcC----------------CccceEEEeccCCC
Q 028834 98 PLILAGKSMGSRVSCMVACKED----------------IAASAVLCLGYPLK 133 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p----------------~~i~~lv~~~~~~~ 133 (203)
+++|+|||-|+.+--.+..+.. ..|+.+--+++...
T Consensus 194 ~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~ 245 (303)
T PF10561_consen 194 PLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHN 245 (303)
T ss_pred ceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCC
Confidence 7999999999987766555421 25566666666554
No 349
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.40 E-value=81 Score=25.98 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=16.0
Q ss_pred EEEEeChhHHHHHHHHhh
Q 028834 100 ILAGKSMGSRVSCMVACK 117 (203)
Q Consensus 100 ~l~GhS~Gg~la~~~a~~ 117 (203)
.+.|-|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 789999999999998863
No 350
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=22.25 E-value=3.6e+02 Score=20.91 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=26.7
Q ss_pred CCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCe-EEEEEeccC
Q 028834 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAV-EVVTFDYPY 64 (203)
Q Consensus 21 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~-~v~~~d~~g 64 (203)
.+..+|++-||..+++...+ .....++.+ .|| .|+....-|
T Consensus 136 k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~--~~f~~v~v~~ve~ 177 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAY-ACLDHVLDE--YGFDNVFVAAVEG 177 (265)
T ss_pred cCeEEEEEecCCCccHHHHH-HHHHHHHHh--cCCCceEEEEecC
Confidence 45678999999888764443 355666665 777 555555444
No 351
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.05 E-value=1.7e+02 Score=22.85 Aligned_cols=22 Identities=14% Similarity=0.084 Sum_probs=18.3
Q ss_pred cEEEEEeChhHHHHHHHHhhcC
Q 028834 98 PLILAGKSMGSRVSCMVACKED 119 (203)
Q Consensus 98 ~i~l~GhS~Gg~la~~~a~~~p 119 (203)
.-.++|-|.|+..+..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987643
No 352
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=21.97 E-value=27 Score=25.17 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=18.6
Q ss_pred HHHHHHHHHH----HHHHHhC----CCCcEEEEEeChhHH
Q 028834 78 KLVEFHTDVV----KGAVAKF----PGHPLILAGKSMGSR 109 (203)
Q Consensus 78 ~~~~~~~~~i----~~~~~~~----~~~~i~l~GhS~Gg~ 109 (203)
...+.+++.+ ..+.+.+ ..++|.|+|-|++..
T Consensus 77 ~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 77 YSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3444455455 5555443 356899999999877
No 353
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=21.87 E-value=2.6e+02 Score=20.12 Aligned_cols=49 Identities=14% Similarity=0.021 Sum_probs=25.0
Q ss_pred HHhcCCCeEEEEEeccCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChh
Q 028834 48 LGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMG 107 (203)
Q Consensus 48 ~~~l~~g~~v~~~d~~g~g~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~GhS~G 107 (203)
+..+..+..+++.|-.|. .....++++.+..+......+=++++|-+.|
T Consensus 61 l~~i~~~~~~i~Ld~~Gk-----------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 61 LKKIPPNDYVILLDERGK-----------QLSSEEFAKKLERWMNQGKSDIVFIIGGADG 109 (155)
T ss_dssp HCTSHTTSEEEEE-TTSE-----------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB
T ss_pred HhhccCCCEEEEEcCCCc-----------cCChHHHHHHHHHHHhcCCceEEEEEecCCC
Confidence 333335666777777662 1334455666666655422233677887777
No 354
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=21.34 E-value=1.1e+02 Score=25.70 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCCcEEEEEeChhHHHHHHHHhhcCC
Q 028834 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI 120 (203)
Q Consensus 86 ~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a~~~p~ 120 (203)
+++.+.++ +..+=+|.|-|+|+.+|..++...++
T Consensus 101 v~kaL~e~-gl~p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 101 VVKALWLR-GLLPRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred HHHHHHHc-CCCCceEEEecHHHHHHHHHHcCCHH
Confidence 44444444 44455799999999999999986433
No 355
>PLN00416 carbonate dehydratase
Probab=21.34 E-value=1.4e+02 Score=23.64 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeChhHHHHHHHH
Q 028834 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~GhS~Gg~la~~~a 115 (203)
....+++....++.+.|+++|||-=|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 455788888888899999999997666655543
No 356
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=21.26 E-value=47 Score=25.63 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=25.8
Q ss_pred CccEEEEEcCCCCCCCchHHHHHHHHHHhcC-CCeEEEEEecc
Q 028834 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYP 63 (203)
Q Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~-~g~~v~~~d~~ 63 (203)
+.|+||++.|..+++ ... ....+...+. .++.|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sG-Kg~--~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASG-KGG--TINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSS-HHH--HHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCC-chH--HHHHHHHhCCCCeeEEEeCCCC
Confidence 467999999988775 322 3455555554 89999999755
No 357
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=21.15 E-value=1.6e+02 Score=21.20 Aligned_cols=35 Identities=14% Similarity=0.262 Sum_probs=21.7
Q ss_pred EEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEecc
Q 028834 27 VFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYP 63 (203)
Q Consensus 27 v~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~ 63 (203)
.+..+-||..-+.....++..+.. +|+.|+.+|.-
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~--~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALAR--KGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHH--TTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhcccc--ccccccccccC
Confidence 445555555434444456666666 89999999984
No 358
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=21.02 E-value=2.3e+02 Score=24.19 Aligned_cols=45 Identities=11% Similarity=0.087 Sum_probs=27.0
Q ss_pred CCCccEEEEEcCCCCCCCc-hHHHHHHHHHHhcCCCeEEEEEeccC
Q 028834 20 TSSSPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDYPY 64 (203)
Q Consensus 20 ~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~~g~~v~~~d~~g 64 (203)
..++.++||+|.+|+.... ..++....++-...-.+.|+.-+..+
T Consensus 156 ~RPknllvFinPfgGkG~g~ki~e~V~~~F~la~v~tkvivTErAn 201 (516)
T KOG1115|consen 156 ERPKNLLVFINPFGGKGNGSKIWETVSKIFILAKVNTKVIVTERAN 201 (516)
T ss_pred cCCccEEEEEcCCCCCCcccchhhhhhhhEEeeecceeEEEEcccc
Confidence 4577889999998877633 22222222221112577888877765
No 359
>PRK00889 adenylylsulfate kinase; Provisional
Probab=20.92 E-value=2.4e+02 Score=20.16 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=23.5
Q ss_pred ccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEe
Q 028834 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD 61 (203)
Q Consensus 23 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d 61 (203)
++.++++.|..++.-+.........+.. .|..+..+|
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~--~g~~v~~id 39 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLRE--AGYPVEVLD 39 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHH--cCCeEEEEc
Confidence 4558899998888755544444554443 566666664
No 360
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=20.66 E-value=5.4e+02 Score=22.07 Aligned_cols=107 Identities=10% Similarity=0.005 Sum_probs=56.1
Q ss_pred CCCCCccEEEEEcCCCCCCCchHHHHHHHHHHhcCCCeEEEEEeccCCC----CCCCCCCCcHHHHHHHHHHHHHHHHHh
Q 028834 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIA----GGKRKAPPKAEKLVEFHTDVVKGAVAK 93 (203)
Q Consensus 18 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~g~~v~~~d~~g~g----~g~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (203)
+.+....+++++.-..+.... .|.+.-.....++-|.-+|..+.- .+.. ...-....++.+.+.++.....
T Consensus 43 p~g~~~~~villSd~~G~~d~----~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~-ecvylisd~Ealsr~~Qr~a~~ 117 (456)
T COG3946 43 PDGDPQGLVILLSDEAGIGDQ----ERSRADALLARGALVAPVDLGAYLAALGADDN-ECVYLISDFEALSREAQRAADL 117 (456)
T ss_pred ccCCcceeeEEEEcccChhhh----hcchhHHHhhcCCeeeccccchhhhccccCCC-cceEEehhHHHHhHHHHHHhhc
Confidence 344445556666553333221 233332223378889888877531 1111 1111123333444444433333
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhhcCC-ccceEEEec
Q 028834 94 FPGHPLILAGKSMGSRVSCMVACKEDI-AASAVLCLG 129 (203)
Q Consensus 94 ~~~~~i~l~GhS~Gg~la~~~a~~~p~-~i~~lv~~~ 129 (203)
.....-+|.|--.||.+++..+++.|. .+++.+...
T Consensus 118 g~yr~PVl~g~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 118 GVYRLPVLTGPGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred cCcccceEeecCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 333456888899999999999988654 455555443
No 361
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=20.29 E-value=2.1e+02 Score=22.91 Aligned_cols=21 Identities=29% Similarity=0.404 Sum_probs=16.2
Q ss_pred CcEEEEEeC-hhHHHHHHHHhh
Q 028834 97 HPLILAGKS-MGSRVSCMVACK 117 (203)
Q Consensus 97 ~~i~l~GhS-~Gg~la~~~a~~ 117 (203)
++-+|+|-| .||.+.-++...
T Consensus 105 ~ptvlIG~S~~~g~ft~evv~~ 126 (279)
T cd05312 105 KPTVLIGLSGVGGAFTEEVVRA 126 (279)
T ss_pred CCCEEEEeCCCCCCCCHHHHHH
Confidence 568999999 588777766655
No 362
>PRK13937 phosphoheptose isomerase; Provisional
Probab=20.07 E-value=3.2e+02 Score=20.06 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEEeChhHHHHHHHH
Q 028834 81 EFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVA 115 (203)
Q Consensus 81 ~~~~~~i~~~~~~~-~~~~i~l~GhS~Gg~la~~~a 115 (203)
+.+.+.++...+.. ..++|.++|..-.+.+|...+
T Consensus 22 ~~l~~aa~~i~~~l~~a~rI~i~G~G~S~~~A~~~a 57 (188)
T PRK13937 22 EAIAKVAEALIEALANGGKILLCGNGGSAADAQHIA 57 (188)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCcHhHHHHHHHH
Confidence 34444444444443 567899999877777666543
Done!