Your job contains 1 sequence.
>028840
MELCTAIQTQSAISNHHHPFLTATTAPALARTKSALSLKQTTVSRSGILYYTNPLPKATS
EETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNELLDNLKI
KFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYTLWFSWRYLLFK
KNRDELATKIEELKQQVLGSNDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028840
(203 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121065 - symbol:AT4G38100 species:3702 "Arabi... 309 1.3e-27 1
TAIR|locus:2125018 - symbol:AT4G01150 "AT4G01150" species... 218 5.8e-18 1
TAIR|locus:2044335 - symbol:PSI-P "photosystem I P subuni... 138 1.8e-09 1
TAIR|locus:2037435 - symbol:AT1G52220 "AT1G52220" species... 117 2.9e-07 1
>TAIR|locus:2121065 [details] [associations]
symbol:AT4G38100 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009535 InterPro:IPR025564
Pfam:PF14159 UniGene:At.47991 EMBL:AY086071 EMBL:BT025771
IPI:IPI00519835 RefSeq:NP_568035.1 UniGene:At.31205 STRING:Q8LDD3
PaxDb:Q8LDD3 PRIDE:Q8LDD3 EnsemblPlants:AT4G38100.1 GeneID:829966
KEGG:ath:AT4G38100 TAIR:At4g38100 eggNOG:NOG282488
HOGENOM:HOG000239512 InParanoid:Q8LDD3 OMA:ELCTRST PhylomeDB:Q8LDD3
ProtClustDB:CLSN2689814 Genevestigator:Q8LDD3 Uniprot:Q8LDD3
Length = 193
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 79/207 (38%), Positives = 116/207 (56%)
Query: 1 MELCTAIQTQSAISNHHHPFXXXXXXXXXXXXKSALSLKQTTVS---RSGILYYTNPLPK 57
MELCT ++ + I++ F + +L L++ S +S L + P
Sbjct: 1 MELCT--RSTTIITHLPASFNGHGYLAGKSVDRISLPLQRNVASLVLQSRTLRCSRKFPG 58
Query: 58 AT-SEETSSGTDQYVVDKRDGATAAEDVPAVEKNVYNESVATAVPKEESPVDGLTNELLD 116
T +EETS+G +++ V+ RDG A A EKN +E A E+ L E L+
Sbjct: 59 ETVTEETSTGVNEFGVEDRDGVVVA----AEEKNSNSE----APQAEDEETQAL--EFLN 108
Query: 117 NLKIKFDSEDKYSLVLYXXXXXXXXXXXXXXXXXIDSIPLFPKLMEVVGLGYTLWFSWRY 176
++K+ DS+ YS++LY +++IPLFPKLMEVVGLGYTLWF+ RY
Sbjct: 109 DIKL--DSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRY 166
Query: 177 LLFKKNRDELATKIEELKQQVLGSNDD 203
LLFK+NR+EL TK+ E+K+QVLGS+ +
Sbjct: 167 LLFKRNREELKTKVSEIKKQVLGSDSE 193
>TAIR|locus:2125018 [details] [associations]
symbol:AT4G01150 "AT4G01150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009941
GO:GO:0009535 GO:GO:0010287 EMBL:AL161491 EMBL:AF007269
HOGENOM:HOG000239454 InterPro:IPR025564 Pfam:PF14159 EMBL:U19925
EMBL:AY091679 EMBL:AF389292 IPI:IPI00529234 PIR:T01726
RefSeq:NP_567210.1 UniGene:At.48817 IntAct:O04616 STRING:O04616
PaxDb:O04616 PRIDE:O04616 EnsemblPlants:AT4G01150.1 GeneID:828181
KEGG:ath:AT4G01150 TAIR:At4g01150 eggNOG:NOG85035 InParanoid:O04616
OMA:IYGGGAI PhylomeDB:O04616 ProtClustDB:CLSN2917477
Genevestigator:O04616 Uniprot:O04616
Length = 164
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 49/109 (44%), Positives = 68/109 (62%)
Query: 94 ESVATAVPKEE-SPVDGLTNELLDNLKIKFDS-EDKYSLVLYXXXXXXXXXXXXXXXXXI 151
E + T EE S +D TNEL+ +LK K+D E+K ++++Y I
Sbjct: 57 ELLKTRASSEETSSID--TNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAI 114
Query: 152 DSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGS 200
+S+PL PK+ME+VGLGYT WF +RYLLFK +R ELA IE LK+++ GS
Sbjct: 115 NSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163
>TAIR|locus:2044335 [details] [associations]
symbol:PSI-P "photosystem I P subunit" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0009941 "chloroplast
envelope" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009773 "photosynthetic electron
transport in photosystem I" evidence=IDA] [GO:0030093 "chloroplast
photosystem I" evidence=IMP;IDA] [GO:0009295 "nucleoid"
evidence=IDA] [GO:0009508 "plastid chromosome" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0015979
"photosynthesis" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] GO:GO:0009737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941 EMBL:AC005310
GO:GO:0009773 GO:GO:0009508 GO:GO:0030093 EMBL:AY065156
EMBL:AY114583 EMBL:AY086711 IPI:IPI00522693 PIR:T02683
RefSeq:NP_001031551.1 RefSeq:NP_566086.1 UniGene:At.20137
UniGene:At.25160 IntAct:Q8LCA1 STRING:Q8LCA1 PaxDb:Q8LCA1
PRIDE:Q8LCA1 EnsemblPlants:AT2G46820.1 EnsemblPlants:AT2G46820.2
GeneID:819295 KEGG:ath:AT2G46820 GeneFarm:3187 TAIR:At2g46820
eggNOG:NOG252564 HOGENOM:HOG000239454 InParanoid:Q8LCA1 OMA:YSGWFAY
PhylomeDB:Q8LCA1 ProtClustDB:PLN02777 Genevestigator:Q8LCA1
GermOnline:AT2G46820 InterPro:IPR025564 Pfam:PF14159 Uniprot:Q8LCA1
Length = 174
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 31/119 (26%), Positives = 59/119 (49%)
Query: 87 VEKNVYNESVATAVPKEESPVDGLTNELLDNLKIKFDS----EDKYSLVLYXXXXXXXXX 142
+ +NV + + + T EL + +K ++ +DKY++
Sbjct: 56 IVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALW 115
Query: 143 XXXXXXXXIDSIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLGSN 201
ID +PL P ++E+VG+GYT WF+++ L+FK +R+ L K++ + +LGS+
Sbjct: 116 GSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>TAIR|locus:2037435 [details] [associations]
symbol:AT1G52220 "AT1G52220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0043085
"positive regulation of catalytic activity" evidence=RCA]
EMBL:CP002684 GO:GO:0009535 UniGene:At.16830 EMBL:AC022354
InterPro:IPR025564 Pfam:PF14159 EMBL:AF410269 EMBL:AY097365
IPI:IPI00529609 PIR:B96562 RefSeq:NP_564603.1 IntAct:Q9M812
STRING:Q9M812 PRIDE:Q9M812 EnsemblPlants:AT1G52220.1 GeneID:841652
KEGG:ath:AT1G52220 TAIR:At1g52220 InParanoid:Q9M812 OMA:AVWASAN
PhylomeDB:Q9M812 ProtClustDB:CLSN2688710 Genevestigator:Q9M812
Uniprot:Q9M812
Length = 156
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 95 SVATAVPKEESPVDGLTN-ELLDNLKIKFD-SEDKYSLVLYXXXXXXXXXXXXXXXXXID 152
S++ V D T+ +++ ++ +D SED+ L+ ID
Sbjct: 49 SISLMVKASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAID 108
Query: 153 SIPLFPKLMEVVGLGYTLWFSWRYLLFKKNRDELATKIEELKQQVLG 199
+P+ E+VG+ ++ WF++RYLLFK +R EL+ +++ +LG
Sbjct: 109 KLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 203 174 0.00075 109 3 11 23 0.48 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 590 (63 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.73u 0.16s 17.89t Elapsed: 00:00:01
Total cpu time: 17.73u 0.16s 17.89t Elapsed: 00:00:01
Start: Thu May 9 16:50:59 2013 End: Thu May 9 16:51:00 2013