BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028848
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic
OS=Arabidopsis thaliana GN=RH58 PE=2 SV=1
Length = 472
Score = 218 bits (554), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/151 (71%), Positives = 125/151 (82%), Gaps = 4/151 (2%)
Query: 44 LRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPV 103
L+AV +S+ IE + LTLR++CQG VPEH+L RM+E G+V PTDIQREALP
Sbjct: 51 LQAVAETSS-EIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPT 109
Query: 104 LFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAA 163
LF+ RDCILHAQTGSGKTLTYLLLIFSL+N QRS+VQAVIVVPTRELGMQVTKVAR+LAA
Sbjct: 110 LFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAA 169
Query: 164 KPSDTDLEHKPCTVMALLDGGMLRRHKSWLK 194
K ++++ K CTVMALLDGG LRRHKSWLK
Sbjct: 170 K---SEIDVKGCTVMALLDGGTLRRHKSWLK 197
>sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2
Length = 438
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 104/127 (81%), Gaps = 9/127 (7%)
Query: 68 TLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLL 127
TLRE+C G VPEHVL+R +E GYV+PT++Q ++LPVL S +DCILHAQTGSGKTL YLL
Sbjct: 39 TLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLS 98
Query: 128 IFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLR 187
+FS ++ RS+VQA++VVPTRELGMQVTKVAR+LAA K CTVMALLDGGMLR
Sbjct: 99 VFSAIDFGRSSVQALVVVPTRELGMQVTKVARILAA---------KACTVMALLDGGMLR 149
Query: 188 RHKSWLK 194
R KSW+K
Sbjct: 150 RQKSWVK 156
>sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp.
japonica GN=Os02g0636300 PE=2 SV=1
Length = 573
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 22/169 (13%)
Query: 38 SISWKPLRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQ 97
S + KP+++ L SAV + L + + + + +P ++ R+++ G PT++Q
Sbjct: 101 SFNAKPVKSALPKSAVLKKTLK--IDESLFSAKSFEELGLPPLLIDRLNKEGLTAPTEVQ 158
Query: 98 REALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNA-----------QRSAVQAVIVVP 146
A+P++ D ++ + TGSGKTL YLL I S + +RS V+AVIV P
Sbjct: 159 SAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAP 218
Query: 147 TRELGMQVTK-VARVLAAKPSDTDLEHKPCTVMALLDGGMLRRHKSWLK 194
+RELGMQ+ + V ++L P+D L V L+ G R + LK
Sbjct: 219 SRELGMQIVREVEKILG--PNDKRL------VQQLVGGANRSRQEEALK 259
>sp|Q10PV9|RH47B_ORYSJ DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp.
japonica GN=Os03g0219700 PE=2 SV=1
Length = 573
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 22/169 (13%)
Query: 38 SISWKPLRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQ 97
S + KP ++ L SAV + L + + + + +P ++ R+++ G PT++Q
Sbjct: 101 SFNSKPAKSTLPKSAVVKKTLK--IDESLFSAKSFEELGLPPLLIDRLNKEGLSTPTEVQ 158
Query: 98 REALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNA-----------QRSAVQAVIVVP 146
A+P++ D ++ + TGSGKTL YLL I S + +RS V+AVIV P
Sbjct: 159 SAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAP 218
Query: 147 TRELGMQVTK-VARVLAAKPSDTDLEHKPCTVMALLDGGMLRRHKSWLK 194
+RELGMQ+ + V ++L P+D L V L+ G R + LK
Sbjct: 219 SRELGMQIVREVEKILG--PNDKRL------VQQLVGGANRSRQEEALK 259
>sp|Q8W4E1|RH47_ARATH DEAD-box ATP-dependent RNA helicase 47, mitochondrial
OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2
Length = 551
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Query: 77 VPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLV---- 132
+P+ +L ++ G+ +PTD+Q A+P + D ++ + TGSGKTL YLL I S +
Sbjct: 117 LPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLA 176
Query: 133 ---------NAQRSAVQAVIVVPTRELGMQVTK 156
N +R+ +QA+IV P+RELGMQ+ +
Sbjct: 177 EKSRSSHSENDKRTEIQAMIVAPSRELGMQIVR 209
>sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP28 PE=3 SV=2
Length = 575
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 30 TNRAFLPVSISW--KPLRAVLSSSAVSIEELAAGT--GNN-SLTLRELCQGHVPEHVLRR 84
+N FLP W K L + S +E + T GNN LR + +P +L
Sbjct: 105 SNNDFLPAEEHWSDKKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSWKESGIPTTLLNT 164
Query: 85 MDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNA---------- 134
+D+ GY PT IQR A+P RD + A+TGSGKTL +L+ + S ++A
Sbjct: 165 IDQLGYKEPTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEH 224
Query: 135 -QRSAVQAV---IVVPTRELGMQVTKVARVLAA 163
Q S + V ++ PTREL +Q++K A+ A+
Sbjct: 225 KQESNLNKVLGLVLAPTRELALQISKEAKKFAS 257
>sp|Q54E49|DDX6_DICDI Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium
discoideum GN=ddx6 PE=3 SV=1
Length = 423
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 56 EELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQ 115
E++ A GN+ L H+ +LR + E GYV P+ IQ +A+P+ + RD + A+
Sbjct: 41 EDVTATEGNDFDDL------HLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAK 94
Query: 116 TGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLA 162
G+GKT ++L+ + + +Q +I+VPTREL +Q ++V + L
Sbjct: 95 NGTGKTASFLIPALEKTDPTKDVIQVLILVPTRELALQTSQVCKELG 141
>sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana
GN=RH57 PE=2 SV=1
Length = 541
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 14/110 (12%)
Query: 62 TGNN---------SLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCIL 112
+GNN L+ R C+G++ LR + E G+ PT IQR+A+P+L S R+C
Sbjct: 128 SGNNIPPPLKSFAELSSRYGCEGYI----LRNLAELGFKEPTPIQRQAIPILLSGRECFA 183
Query: 113 HAQTGSGKTLTYLL-LIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVL 161
A TGSGKT ++ ++ L ++AVI+ P REL Q + + L
Sbjct: 184 CAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKL 233
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus
GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 69 LRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLI 128
++ Q + +L + + GY PT IQ +A+P + S RD I A+TGSGKT+ +LL +
Sbjct: 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
Query: 129 FSLVNAQRSAVQ-----AVIVVPTRELGMQVTK 156
F + QRS + AVI+ PTREL +Q+TK
Sbjct: 431 FRHIMDQRSLEEGEGPIAVIMTPTRELALQITK 463
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46
PE=2 SV=1
Length = 1032
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 69 LRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLI 128
++ Q + +L + + GY PT IQ +A+P + S RD I A+TGSGKT+ +LL +
Sbjct: 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
Query: 129 FSLVNAQRSAVQ-----AVIVVPTRELGMQVTK 156
F + QRS + AVI+ PTREL +Q+TK
Sbjct: 431 FRHIMDQRSLEEGEGPIAVIMTPTRELALQITK 463
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46
PE=1 SV=2
Length = 1032
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 69 LRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLI 128
++ Q + +L + + GY PT IQ +A+P + S RD I A+TGSGKT+ +LL +
Sbjct: 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
Query: 129 FSLVNAQRSAVQ-----AVIVVPTRELGMQVTK 156
F + QRS + AVI+ PTREL +Q+TK
Sbjct: 431 FRHIMDQRSLEEGEGPIAVIMTPTRELALQITK 463
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46
PE=1 SV=2
Length = 1031
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 69 LRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLI 128
++ Q + +L + + GY PT IQ +A+P + S RD I A+TGSGKT+ +LL +
Sbjct: 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
Query: 129 FSLVNAQRSAVQ-----AVIVVPTRELGMQVTK 156
F + QRS + AVI+ PTREL +Q+TK
Sbjct: 431 FRHIMDQRSLEEGEGPIAVIMTPTRELALQITK 463
>sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp.
japonica GN=Os07g0647900 PE=2 SV=2
Length = 540
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 89 GYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLL-LIFSLVNAQRSAVQAVIVVPT 147
G+ PT IQR+A+P+L S R+C A TGSGKTL +L ++ + + V+AVI+ PT
Sbjct: 165 GFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPT 224
Query: 148 RELGMQVTKVARVLA 162
REL Q T+ + LA
Sbjct: 225 RELAAQTTRECKKLA 239
>sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana
GN=RH8 PE=2 SV=1
Length = 505
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 36 PVSISWKP-LRAVLSSSAVSIEELAAGTGN---NSLTLRELCQGHVPEHVLRRMDETGYV 91
P S WK L+ + E++ A GN + REL G + E G+
Sbjct: 102 PNSEDWKARLKLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMG---------IYEKGFE 152
Query: 92 LPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELG 151
P+ IQ E++P+ + RD + A+ G+GKT + + + ++ + +QAVI+VPTREL
Sbjct: 153 RPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELA 212
Query: 152 MQVTKVARVLA 162
+Q ++V + L
Sbjct: 213 LQTSQVCKELG 223
>sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=HAS1 PE=3 SV=1
Length = 610
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 19/132 (14%)
Query: 56 EELAAGTGNNSLTLRELCQG---------------HVPEHVLRRMDETGYVLPTDIQREA 100
+E AAG+G N+L + +L G ++ E + + G+ T+IQR+A
Sbjct: 102 DEDAAGSGANALAVADLPSGTSIPTVDDPTRFDELNLSERTMEAIKTMGFESMTEIQRKA 161
Query: 101 LPVLFSSRDCILHAQTGSGKTLTYLL----LIFSLVNAQRSAVQAVIVVPTRELGMQVTK 156
+P L S +D + A+TGSGKTL +L+ ++ S+ R+ ++V PTREL +Q+
Sbjct: 162 IPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRFKPRNGTGVIVVSPTRELALQIFG 221
Query: 157 VARVLAAKPSDT 168
VAR L K S T
Sbjct: 222 VARELMEKHSQT 233
>sp|A6RY31|DHH1_BOTFB ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain
B05.10) GN=dhh1 PE=3 SV=1
Length = 538
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E GY P+ IQ EA+PV + RD + A+ G+GKT +++ +N + + VQ +I+VP
Sbjct: 64 EMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVP 123
Query: 147 TRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLR 187
TREL +Q ++V + L +H VM G LR
Sbjct: 124 TRELALQTSQVCKTLG--------QHLGINVMVTTGGTTLR 156
>sp|Q7S5D9|DHH1_NEUCR ATP-dependent RNA helicase dhh-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dhh-1 PE=3 SV=2
Length = 505
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ EA+PV + RD + A+ G+GKT +++ + +N + S +Q +I+VP
Sbjct: 62 EAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNKINPKVSKIQCLILVP 121
Query: 147 TRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLR 187
TREL MQ ++V + L +H VM G LR
Sbjct: 122 TRELAMQTSQVCKTLG--------KHLGINVMVTTGGTGLR 154
>sp|Q6C0X2|DHH1_YARLI ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DHH1 PE=3 SV=1
Length = 522
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 61 GTGNNSLTL-RELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSG 119
GTG L REL G + E G+ P+ IQ EA+P+ + RD + A+ G+G
Sbjct: 27 GTGFEDFFLKRELLMG---------IFEAGFENPSPIQEEAIPIALAGRDILARAKNGTG 77
Query: 120 KTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLA 162
KT +++ VN + + +QA+I+VPTREL +Q ++V + L
Sbjct: 78 KTAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLG 120
>sp|Q5AAW3|DHH1_CANAL ATP-dependent RNA helicase DHH1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DHH1 PE=3 SV=1
Length = 549
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++P+ + RD + A+ G+GKT ++++ LV + + VQA+I+VP
Sbjct: 47 EAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVP 106
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V R L
Sbjct: 107 TRELALQTSQVVRTLG 122
>sp|Q09181|DHH1_SCHPO Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ste13 PE=3 SV=1
Length = 485
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++P+ S RD + A+ G+GKT +++ V+ ++S +Q +I+VP
Sbjct: 61 EAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVP 120
Query: 147 TRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLR 187
TREL +Q ++V + L +H VM G LR
Sbjct: 121 TRELALQTSQVCKTLG--------KHMNVKVMVTTGGTTLR 153
>sp|A4R715|DHH1_MAGO7 ATP-dependent RNA helicase DHH1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DHH1 PE=3 SV=2
Length = 535
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++PV + RD + A+ G+GKT +++ +N + S +Q +I+VP
Sbjct: 64 EAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVP 123
Query: 147 TRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLR 187
TREL MQ ++V + L +H VM G LR
Sbjct: 124 TRELAMQTSQVCKTLG--------KHLGINVMVTTGGTTLR 156
>sp|Q0U7S9|DHH1_PHANO ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DHH1 PE=3 SV=1
Length = 522
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 40 SWKP-LRAVLSSSAVSIEELAAGTG---NNSLTLRELCQGHVPEHVLRRMDETGYVLPTD 95
WK L+A + E++ A G + REL G + E G+ P+
Sbjct: 24 DWKEGLKAPAKDARPQTEDVTATKGLEFEDFFIKRELMMG---------IFEAGFEKPSP 74
Query: 96 IQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVT 155
IQ E +PV + RD + A+ G+GKT +++ VN + S QA+I+VPTREL +Q +
Sbjct: 75 IQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERVNPKISKTQALILVPTRELALQTS 134
Query: 156 KVARVLA 162
+V + L
Sbjct: 135 QVCKTLG 141
>sp|Q4HW67|DHH1_GIBZE ATP-dependent RNA helicase DHH1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DHH1 PE=3
SV=1
Length = 486
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++PV + RD + A+ G+GKT +++ +N + S +Q +I+VP
Sbjct: 59 EAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVP 118
Query: 147 TRELGMQVTKVARVLA 162
TREL MQ ++V + L
Sbjct: 119 TRELAMQTSQVCKTLG 134
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 69 LRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLI 128
+RE PE+VL+ + + G+V PT IQ + P+ RD I A+TGSGKTL YLL
Sbjct: 90 VREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPA 149
Query: 129 FSLVNAQ-----RSAVQAVIVVPTRELGMQVTKVARVLAA 163
VNAQ +++ PTREL +Q+ + A A
Sbjct: 150 IVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGA 189
>sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis (strain RS)
GN=HAS1 PE=3 SV=1
Length = 604
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 79 EHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNA---- 134
E L+ + E G+ T+IQR +P L + RD + A+TGSGKTL++L+ +++A
Sbjct: 133 EKTLKAIQEMGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFK 192
Query: 135 QRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDT 168
R+ ++V PTREL +Q+ VAR L A S T
Sbjct: 193 PRNGTGVIVVSPTRELALQIFGVARELMAHHSQT 226
>sp|Q75BS4|DHH1_ASHGO ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DHH1
PE=3 SV=1
Length = 484
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ EA+P+ + RD + A+ G+GKT +++ +V + + +QA+I+VP
Sbjct: 46 EAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVP 105
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V R L
Sbjct: 106 TRELALQTSQVVRTLG 121
>sp|A7TGU7|DHH1_VANPO ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1
Length = 484
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++PV + RD + A+ G+GKT +++ V ++ + +QA+I+VP
Sbjct: 51 EAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVP 110
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V R L
Sbjct: 111 TRELALQTSQVVRTLG 126
>sp|P39517|DHH1_YEAST ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DHH1 PE=1 SV=1
Length = 506
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ EA+PV + RD + A+ G+GKT +++ V + + +QA+I+VP
Sbjct: 63 EAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVP 122
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V R L
Sbjct: 123 TRELALQTSQVVRTLG 138
>sp|A6ZXG9|DHH1_YEAS7 ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DHH1 PE=3 SV=1
Length = 506
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ EA+PV + RD + A+ G+GKT +++ V + + +QA+I+VP
Sbjct: 63 EAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVP 122
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V R L
Sbjct: 123 TRELALQTSQVVRTLG 138
>sp|Q2GQ93|DHH1_CHAGB ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DHH1 PE=3 SV=1
Length = 512
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++PV RD + A+ G+GKT +++ +N + S +Q +I+VP
Sbjct: 28 EAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVP 87
Query: 147 TRELGMQVTKVARVLA 162
TREL MQ ++V + L
Sbjct: 88 TRELAMQTSQVCKTLG 103
>sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1
PE=3 SV=1
Length = 622
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 79 EHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNA---- 134
E L+ +++ G+ T+IQR +P L + RD + A+TGSGKTL++L+ +++A
Sbjct: 149 EKTLKAINDMGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFK 208
Query: 135 QRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDT 168
R+ ++V PTREL +Q+ VAR L S T
Sbjct: 209 PRNGTGVIVVSPTRELALQIFGVARELCQYHSQT 242
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 66.6 bits (161), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 69 LRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLI 128
++ Q + VL + + Y PT IQ +A+P + S RD I A+TGSGKT+ +LL +
Sbjct: 339 IKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 398
Query: 129 FSLVNAQRSAVQ-----AVIVVPTRELGMQVTK 156
F + QR + AVI+ PTREL +Q+TK
Sbjct: 399 FRHILDQRPVGEAEGPLAVIMTPTRELALQITK 431
>sp|Q58Z64|DHH1_CRYNH ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=VAD1 PE=2 SV=1
Length = 616
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 89 GYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTR 148
G+ P+ IQ +A+P+ + RD + A+ G+GKT ++++ + +N S +QA+I+VPTR
Sbjct: 55 GFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTR 114
Query: 149 ELGMQVTKVARVLAA 163
EL +Q ++V + L A
Sbjct: 115 ELALQTSQVCKTLGA 129
>sp|A1D8G1|DHH1_NEOFI ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1
PE=3 SV=1
Length = 507
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E +PV + RD + A+ G+GKT +++ +N + + QA+I+VP
Sbjct: 64 EAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVP 123
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V + L
Sbjct: 124 TRELALQTSQVCKTLG 139
>sp|P0CQ80|DHH1_CRYNJ ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DHH1 PE=3 SV=1
Length = 625
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 89 GYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTR 148
G+ P+ IQ +A+P+ + RD + A+ G+GKT ++++ + +N S +QA+I+VPTR
Sbjct: 55 GFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTR 114
Query: 149 ELGMQVTKVARVLAA 163
EL +Q ++V + L A
Sbjct: 115 ELALQTSQVCKTLGA 129
>sp|P0CQ81|DHH1_CRYNB ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DHH1 PE=3 SV=1
Length = 625
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 89 GYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTR 148
G+ P+ IQ +A+P+ + RD + A+ G+GKT ++++ + +N S +QA+I+VPTR
Sbjct: 55 GFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTR 114
Query: 149 ELGMQVTKVARVLAA 163
EL +Q ++V + L A
Sbjct: 115 ELALQTSQVCKTLGA 129
>sp|Q94BV4|RH6_ARATH DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana
GN=RH6 PE=2 SV=2
Length = 528
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 40 SWKP-LRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQR 98
WK L+ + E++ A GN E + +LR + E G+ P+ IQ
Sbjct: 129 DWKATLKLPPRDNRYQTEDVTATKGN------EFEDYFLKRDLLRGIYEKGFEKPSPIQE 182
Query: 99 EALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVA 158
E++P+ + D + A+ G+GKT + + ++ + + +QAVI+VPTREL +Q ++V
Sbjct: 183 ESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVC 242
Query: 159 RVLA 162
+ L+
Sbjct: 243 KELS 246
>sp|Q4WWD3|DHH1_ASPFU ATP-dependent RNA helicase dhh1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dhh1
PE=3 SV=1
Length = 507
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E +PV + RD + A+ G+GKT +++ +N + + QA+I+VP
Sbjct: 64 EAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVP 123
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V + L
Sbjct: 124 TRELALQTSQVCKTLG 139
>sp|P54824|DDX6_XENLA ATP-dependent RNA helicase ddx6 OS=Xenopus laevis GN=ddx6 PE=1 SV=2
Length = 481
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 49/72 (68%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++P+ S RD + A+ G+GK+ YL+ + ++ ++ +QA+++VP
Sbjct: 112 EMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVP 171
Query: 147 TRELGMQVTKVA 158
TREL +QV+++
Sbjct: 172 TRELALQVSQIC 183
>sp|Q6FQU5|DHH1_CANGA ATP-dependent RNA helicase DHH1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DHH1 PE=3 SV=1
Length = 507
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ EA+PV + RD + A+ G+GKT +++ + + + +QA+I+VP
Sbjct: 48 EAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVP 107
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V R L
Sbjct: 108 TRELALQTSQVIRTLG 123
>sp|Q2U5A2|DHH1_ASPOR ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dhh1 PE=3 SV=1
Length = 511
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 41 WKP-LRAVLSSSAVSIEELAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQRE 99
WK L+A + E++ A G E ++ ++ + E G+ P+ IQ E
Sbjct: 23 WKDQLKAPAKDARPQTEDVTATKG------LEFEDFYIKRELMMGIFEAGFEKPSPIQEE 76
Query: 100 ALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVAR 159
+PV + RD + A+ G+GKT +++ +N + + QA+I+VPTREL +Q + V +
Sbjct: 77 TIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCK 136
Query: 160 VLA 162
L
Sbjct: 137 TLG 139
>sp|A1CJ18|DHH1_ASPCL ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dhh1 PE=3 SV=1
Length = 503
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E +PV + RD + A+ G+GKT +++ +N + + QA+I+VP
Sbjct: 64 EAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVP 123
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V + L
Sbjct: 124 TRELALQTSQVCKTLG 139
>sp|Q6CSZ7|DHH1_KLULA ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DHH1 PE=3 SV=1
Length = 514
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ EA+PV + +D + A+ G+GKT +++ V + + +QA+I+VP
Sbjct: 53 EAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVP 112
Query: 147 TRELGMQVTKVARVLA 162
TREL +Q ++V R L
Sbjct: 113 TRELALQTSQVVRTLG 128
>sp|Q0IHV9|DDX6_XENTR Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis
GN=ddx6 PE=2 SV=1
Length = 481
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 49/72 (68%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++P+ S RD + A+ G+GK+ YL+ + ++ ++ +QA+++VP
Sbjct: 112 EMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVP 171
Query: 147 TRELGMQVTKVA 158
TREL +QV+++
Sbjct: 172 TRELALQVSQIC 183
>sp|Q6H7S2|RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp.
japonica GN=Os02g0641800 PE=2 SV=2
Length = 508
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 38 SISWKP-LRAVLSSSAVSIEELAAGTGN---NSLTLRELCQGHVPEHVLRRMDETGYVLP 93
S WK L+ + E++ A GN + REL G + E G+ P
Sbjct: 107 SQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKRELLMG---------IYEKGFERP 157
Query: 94 TDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQ 153
+ IQ E++P+ + D + A+ G+GKT + + ++ +++A+Q VI+VPTREL +Q
Sbjct: 158 SPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQ 217
Query: 154 VTKVARVLA 162
++V + L
Sbjct: 218 TSQVCKELG 226
>sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=has-1 PE=3 SV=1
Length = 578
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 58 LAAGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTG 117
+A N+ EL ++ + ++ + E G+ T+IQR +P L + +D + A+TG
Sbjct: 98 IAPSIATNATDFSEL---NLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTG 154
Query: 118 SGKTLTYLL----LIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDT 168
SGKTL +L+ ++ SL R+ A++V PTREL +Q+ VAR L S T
Sbjct: 155 SGKTLAFLIPAIEMLSSLRFKPRNGTGAIVVTPTRELALQIFGVARELMKNHSQT 209
>sp|P09052|VASA1_DROME ATP-dependent RNA helicase vasa, isoform A OS=Drosophila
melanogaster GN=vas PE=1 SV=3
Length = 661
Score = 65.9 bits (159), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 81 VLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLV-----NAQ 135
++ ++++GY +PT IQ+ ++PV+ S RD + AQTGSGKT +LL I S + +
Sbjct: 256 IIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELE 315
Query: 136 RSAVQAVIVVPTRELGMQVTKVARVLA 162
Q VIV PTREL +Q+ AR A
Sbjct: 316 LGRPQVVIVSPTRELAIQIFNEARKFA 342
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 76 HVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLL----LIFSL 131
++ E+ ++ ++E G+ T+IQR +P L + +D + A+TGSGKTL +L+ ++ SL
Sbjct: 118 NLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL 177
Query: 132 VNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDT 168
R+ ++V PTREL +Q+ VAR L S T
Sbjct: 178 KFKPRNGTGVIVVSPTRELALQIFGVARDLMKHHSQT 214
>sp|Q5ZKB9|DDX6_CHICK Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus GN=DDX6
PE=2 SV=1
Length = 483
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 49/72 (68%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++P+ S RD + A+ G+GK+ YL+ + ++ ++ +QA+++VP
Sbjct: 113 EMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVP 172
Query: 147 TRELGMQVTKVA 158
TREL +QV+++
Sbjct: 173 TRELALQVSQIC 184
>sp|P54823|DDX6_MOUSE Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus GN=Ddx6
PE=2 SV=1
Length = 483
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 49/71 (69%)
Query: 87 ETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIFSLVNAQRSAVQAVIVVP 146
E G+ P+ IQ E++P+ S RD + A+ G+GK+ YL+ + ++ ++ +QA+++VP
Sbjct: 113 EMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVP 172
Query: 147 TRELGMQVTKV 157
TREL +QV+++
Sbjct: 173 TRELALQVSQI 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,713,502
Number of Sequences: 539616
Number of extensions: 2520525
Number of successful extensions: 8657
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 6927
Number of HSP's gapped (non-prelim): 1236
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)