BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028852
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica
GN=DI19-1 PE=2 SV=1
Length = 226
Score = 214 bits (545), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 144/233 (61%), Gaps = 38/233 (16%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDS+ W SRLAAAKR Y Q H DR +++ +++++VRP+F CPYCYED D+ S
Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGH-----ADRAGMEEVDMDEEVRPEFACPYCYEDHDVVS 55
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC+HLE+EH E CPICS K+A+DML+HIT+QHG+LFK RRRLRR IP SQAL
Sbjct: 56 LCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFK--NRRRLRRFVIPGSQAL 113
Query: 121 SLLGRDLREAHLQVLLG-------------------------------EAEEISKSVVTS 149
SLL RDLREAHLQVLLG + EE SK ++
Sbjct: 114 SLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISI 173
Query: 150 TEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 202
+D S P W +S D SL+ EERE++ +Q + RA+FVQDLLL+TL D
Sbjct: 174 PDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
>sp|Q6H6E6|DI194_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp.
japonica GN=DI19-4 PE=2 SV=1
Length = 245
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 150/245 (61%), Gaps = 43/245 (17%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQ-------------IDRLSIDDFEVEDDVRPDF 47
MDSD W SRL AAKRQY LQ+ + +DR DD E ED+VRPDF
Sbjct: 1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDF 60
Query: 48 PCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRR 107
PCPYCYED DI SLC+HLEDEH ESKV CP+CS ++++D+L HITLQH +LF+LQR
Sbjct: 61 PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRHH 120
Query: 108 RLRRVAIPSSQALSLLGRDLREAHLQVLLG-----------------------------E 138
RLRRVA+PS+ ALSL GRDL+E +L+VLLG E
Sbjct: 121 RLRRVAVPSNHALSLGGRDLQETYLKVLLGNSSRSSGTNAASSVTDSLLSSLVLNLSSSE 180
Query: 139 AEEISK-SVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLS 197
AE+ +K S + E+ K P+ WK S D +LS EERE+R R+ A R+SFVQ LL+S
Sbjct: 181 AEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLLVS 240
Query: 198 TLLID 202
TL D
Sbjct: 241 TLFDD 245
>sp|Q5QMP3|DI193_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp.
japonica GN=DI19-3 PE=2 SV=1
Length = 246
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 134/248 (54%), Gaps = 48/248 (19%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDD---------------VRP 45
MDS+ W S LAAAKR Y Q H + + E+EDD P
Sbjct: 1 MDSEHWISSLAAAKRFYAAQLGHVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATWP 60
Query: 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQR 105
D CPYCYED DIASLC+HLE++H E + CPIC K+ RDML+HIT+QHG+LFK
Sbjct: 61 DVACPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFK--S 118
Query: 106 RRRLRRVAIPSSQALSLLGRDLREAHLQVLLG---------------------------- 137
RR+RR IP SQALSLL RDLR+A LQ LLG
Sbjct: 119 GRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGF 178
Query: 138 ---EAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDL 194
++EE SK+ V +DTS P W++ D SL+ EERE++ +Q RA+FVQ L
Sbjct: 179 STLDSEERSKAPVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQGL 238
Query: 195 LLSTLLID 202
+LSTL D
Sbjct: 239 VLSTLFED 246
>sp|Q84J70|DI193_ARATH Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana
GN=DI19-3 PE=1 SV=1
Length = 223
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 37/230 (16%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDSD W+ RLA+A R+Y L S L ++ + E++ R +F CP+C + FDI S
Sbjct: 1 MDSDSWSDRLASATRRYQLA---FPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDIVS 57
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC H++++H E+K VCP+C+V+V DM++HITLQH ++FK+ R+R+ RR S L
Sbjct: 58 LCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGG--SYSTL 115
Query: 121 SLLGRDLREAHLQVLLG--------------EAEEISKSVVTSTEDT-----SAKSAAPT 161
S+L R+ + + Q L G A+ + S ++ D S SA
Sbjct: 116 SILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFISPIADGFFTTESCISAETG 175
Query: 162 HMWKTSFD---------PSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 202
+ KT+ SLS E+ +++++ R+ FV++LL ST+L D
Sbjct: 176 PVKKTTIQCLPEQNAKKTSLSAEDHKQKLK----RSEFVRELLSSTILDD 221
>sp|Q9FJ17|DI197_ARATH Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana
GN=DI19-7 PE=1 SV=2
Length = 211
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 25/189 (13%)
Query: 32 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91
L + D E EDD++ +F CP+C ++FDI LC H++ H E+K VCP+C+ KV D++
Sbjct: 28 LYLGDVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVG 87
Query: 92 HITLQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISKSVVTS-- 149
HIT QHG++FK+QRRRRLR+ SS L+ L ++LREA+LQ L G + I S + S
Sbjct: 88 HITTQHGNVFKVQRRRRLRKGGY-SSTYLT-LKKELREANLQSLGGSSTFIPSSNIDSDP 145
Query: 150 ---------------TEDTSAKSAAPTHMWKTSF-DPSLSHEEREKRIRQGAGRASFVQD 193
TE S +P K+ S S+E++EK A ++ FV+
Sbjct: 146 LLSSFMFKPPSAIPITEGDSVAQVSPKDTSKSKIQQESFSNEDQEK-----AKKSKFVRG 200
Query: 194 LLLSTLLID 202
LL ST+L D
Sbjct: 201 LLWSTMLED 209
>sp|Q6NM26|DI196_ARATH Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana
GN=DI19-6 PE=1 SV=1
Length = 222
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 5/136 (3%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDSD W+ RLA+A R+Y L S + L ++ E EDD R ++ CP+C + FDI S
Sbjct: 1 MDSDSWSDRLASASRRYQLD---FLSRSDNFLGFEEIEGEDDFREEYACPFCSDYFDIVS 57
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC H++++H ++K VCPIC+VKV+ DM++HITLQH ++FK+ R+R+ RR S L
Sbjct: 58 LCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQS--ML 115
Query: 121 SLLGRDLREAHLQVLL 136
S+L R+ + + Q L
Sbjct: 116 SILKREFPDGNFQSLF 131
>sp|Q39083|DI191_ARATH Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1
PE=1 SV=2
Length = 206
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 87/143 (60%), Gaps = 11/143 (7%)
Query: 32 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91
+ ++ + +DD + +F CP+C E +DI LC H++DEH+ ESK VCP+CS+KV D+++
Sbjct: 20 MGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVA 79
Query: 92 HITLQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISKSVVTSTE 151
HITL HG LFKLQR+R+ R+ S+ LSLL ++LRE LQ LLG TS
Sbjct: 80 HITLHHGSLFKLQRKRKSRKSGTNST--LSLLRKELREGDLQRLLG---------FTSRN 128
Query: 152 DTSAKSAAPTHMWKTSFDPSLSH 174
+ A S P + + P+ S
Sbjct: 129 GSVASSVTPDPLLSSFISPTRSQ 151
>sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp.
japonica GN=DI19-2 PE=2 SV=2
Length = 233
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 29/181 (16%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
+ CP+C EDFD + C H++DEH+ E+K VCPIC+ +V D++ H+T+QHG FK+QRR
Sbjct: 54 YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRR 113
Query: 107 RRLRRVAIPSSQALSLLGRDLREAHLQVLLGEAEEISK-----------------SVVTS 149
RR+R+++ S LSLL +DLR+ LQ LG + +S V
Sbjct: 114 RRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVSNPPAAAPDPFLSSLICSLPVAEP 173
Query: 150 TEDTSAKSAAPTHMWKTSFD--------PSLSHEEREKRIRQGAGRASFVQDLLLSTLLI 201
++D + S+ + D PSLS +++++R A R+ FV+ L+LST+
Sbjct: 174 SKDLHSDSSDNNFLLNKFPDDKTAERAEPSLSEKDQKER----AQRSKFVRGLVLSTIFE 229
Query: 202 D 202
D
Sbjct: 230 D 230
>sp|Q8VXU6|DI194_ARATH Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana
GN=DI19-4 PE=1 SV=1
Length = 224
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 113/190 (59%), Gaps = 24/190 (12%)
Query: 35 DDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHIT 94
+D E EDD++ +F CP+C EDFDI LC H+++EH E+K VCP+C+ +V D++ HIT
Sbjct: 35 EDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHIT 94
Query: 95 LQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLG-----------EAEEIS 143
QH + FK+QRRRRLRR SS L+ L ++LREA+LQ LLG +++ +
Sbjct: 95 TQHANFFKVQRRRRLRRGGY-SSTYLA-LKKELREANLQSLLGGSSSFTSSTNIDSDPLL 152
Query: 144 KSVV---TSTEDTSAKSAAPTHMW----KTSFDPSLSHEEREKRI----RQGAGRASFVQ 192
S + S ++ KSA P + K S SL + +E + ++ A ++ FV+
Sbjct: 153 SSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQEKAKKSEFVR 212
Query: 193 DLLLSTLLID 202
LLLST+L D
Sbjct: 213 GLLLSTMLED 222
>sp|O04259|DI195_ARATH Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana
GN=DI19-5 PE=1 SV=2
Length = 214
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 47/67 (70%)
Query: 36 DFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
+FE +D++ D+PCP+C +D+D+ LC H+++EH ++ +CP+CS +V M+ HIT
Sbjct: 32 EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITT 91
Query: 96 QHGHLFK 102
QH +FK
Sbjct: 92 QHRDVFK 98
>sp|Q5JME8|DI195_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp.
japonica GN=DI19-5 PE=2 SV=1
Length = 202
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
FPCP+CY + ++ +C+HL++EH +++ VCP+C+ + RDM +H +QH HL K R
Sbjct: 37 FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHSHLLK---R 93
Query: 107 RRLRRVA----IPSSQA---------LSLLGRDLREAHLQVLLGEAEEISKSVVTSTEDT 153
R+ R + PS+ + + R ++ LL + T++++T
Sbjct: 94 RKPSRPSSSWPTPSNNSDPYFEGPPQYMMNNRTYQDPAPDPLLSQFICSMAQTDTNSDNT 153
Query: 154 SAKSA--APTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLL 200
+ + A A +H + S +L+ + + +++ R FV+++++ST+L
Sbjct: 154 NTEIAVSAVSHDQRLSQRVTLTDDASKLELKERLQRIEFVKEIIMSTIL 202
>sp|Q8GWK1|DI192_ARATH Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana
GN=DI19-2 PE=1 SV=1
Length = 221
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 38 EVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQH 97
EV+DD+ ++PCP+C D+D+ LC H+++EH E+ +CP+CS +V M+ HIT H
Sbjct: 38 EVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHH 97
Query: 98 GHLFKLQRRRRLRR 111
+ K +++ R
Sbjct: 98 RDVLKSEQKEMSYR 111
>sp|Q7XBA5|DI196_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp.
japonica GN=DI19-6 PE=2 SV=1
Length = 208
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 48 PCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRR 107
PCP+CY + ++ LC HL++EH + K VCPIC+ + +D H +QH HL L+RR+
Sbjct: 38 PCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNLDKDTDEHFRVQHSHL--LKRRK 95
>sp|Q4U5R4|RN114_BOVIN RING finger protein 114 OS=Bos taurus GN=RNF114 PE=2 SV=1
Length = 230
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 140 RYTFPCPYCPEKNFDQEGLVEHCKLSHSTDTKSVVCPICA 179
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus GN=Rnf114 PE=2 SV=1
Length = 229
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 139 RYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICA 178
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus GN=Rnf114 PE=2 SV=2
Length = 229
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 139 RYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICA 178
>sp|Q6J1I8|RN114_PIG RING finger protein 114 OS=Sus scrofa GN=RNF114 PE=2 SV=1
Length = 228
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICA 177
>sp|Q6J212|RN114_PANTR RING finger protein 114 OS=Pan troglodytes GN=RNF114 PE=2 SV=1
Length = 228
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICA 177
>sp|Q9Y508|RN114_HUMAN RING finger protein 114 OS=Homo sapiens GN=RNF114 PE=1 SV=1
Length = 228
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICA 177
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 169 DPSLSHEEREKRIRQGAGRASFVQDLLLSTLL 200
DP +S ER+ + A R+ FVQ+LLLSTL+
Sbjct: 298 DPKMSETERQSMESERADRSLFVQELLLSTLV 329
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 143 SKSVVTSTEDTSAKSAAPTHMWKTSF-----------DPSLSHEEREKRIRQGAGRASFV 191
S T T+ T+A + + T + S DP ++ ER+ + A R+ FV
Sbjct: 261 SNVTTTITQSTAATNTSSTENNQQSIQNSQFLLTRLNDPKMTEAERQSIESERADRSLFV 320
Query: 192 QDLLLSTLL 200
Q+LLLSTL+
Sbjct: 321 QELLLSTLM 329
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 169 DPSLSHEEREKRIRQGAGRASFVQDLLLSTLL 200
DP +S ER+ + A R+ FVQ+LLLSTL+
Sbjct: 298 DPKMSETERQSMESERADRSLFVQELLLSTLV 329
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 169 DPSLSHEEREKRIRQGAGRASFVQDLLLSTLL 200
DP +S ER+ + A R+ FVQ+LLLSTL+
Sbjct: 298 DPKMSEAERQSMESERADRSLFVQELLLSTLV 329
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
>sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus GN=Znf536 PE=2 SV=1
Length = 1302
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 38 EVEDDVRPD--FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
++EDD R + +PCP C + F S+ S H+ E K CP C + A+ I L
Sbjct: 119 DIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGE-KPFKCPYCDHRAAQKGNLKIHL 177
Query: 96 QHGHLFKLQR-RRRLR 110
+ L L + R R+R
Sbjct: 178 RTHKLGNLGKGRGRVR 193
>sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens GN=ZNF536 PE=1 SV=3
Length = 1300
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 38 EVEDDVRPD--FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
++EDD R + +PCP C + F S+ S H+ E K CP C + A+ I L
Sbjct: 119 DIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGE-KPFKCPYCDHRAAQKGNLKIHL 177
Query: 96 QHGHLFKLQR-RRRLR 110
+ L L + R R+R
Sbjct: 178 RTHKLGNLGKGRGRVR 193
>sp|P09437|CYB2_HANAN Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2
Length = 573
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 144 KSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTL 199
K V STE K++AP ++ T+ L H E E I +GAGR VQ ++STL
Sbjct: 240 KDVDISTEFFGEKTSAPFYISATAL-AKLGHPEGEVAIAKGAGREDVVQ--MISTL 292
>sp|Q1L721|RN138_XENLA E3 ubiquitin-protein ligase RNF138 OS=Xenopus laevis GN=rnf138 PE=1
SV=1
Length = 222
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS-------VKVARDMLSHITLQ 96
P + CP C E + + SL H + H E VCPIC+ ++ ++++H+ +
Sbjct: 132 PKYKCPLCSEHNLNQRSLLEHCNNVHYYEEVEMVCPICATLPWGDPIQTTGNVIAHLNAR 191
Query: 97 H 97
H
Sbjct: 192 H 192
>sp|A6VDE4|Y5760_PSEA7 UPF0061 protein PSPA7_5760 OS=Pseudomonas aeruginosa (strain PA7)
GN=PSPA7_5760 PE=3 SV=1
Length = 486
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 16/87 (18%)
Query: 50 PYCY-EDFDIASLCSHLED--EHSCESKVTVC------------PICSVKVARDMLS-HI 93
PY + +DFD +C+H +D +S ++V + P+ V R L +
Sbjct: 265 PYAFLDDFDANHICNHSDDSGRYSFSNQVPIAHWNLAALAQALTPLVEVDELRASLELFL 324
Query: 94 TLQHGHLFKLQRRRRLRRVAIPSSQAL 120
L H L RRR VA+ + QAL
Sbjct: 325 PLYQAHYLDLMRRRLGLGVAVENDQAL 351
>sp|O16999|ZPR1_CAEEL Zinc finger protein ZPR1 homolog OS=Caenorhabditis elegans
GN=W03F9.1 PE=3 SV=2
Length = 455
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 31 RLSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDML 90
LS DD+E V D CP C ED + +C+ + + CP C K
Sbjct: 11 NLSADDYEAAPIVV-DSVCPVCEEDGETRIMCTSIPYYRAVILMSFECPHCGHKNNEIQS 69
Query: 91 SHITLQHGHL--FKLQRRRRLRRVAIPSSQA 119
+HG L ++Q+ LRR + S A
Sbjct: 70 GEAVQEHGTLIVLRVQKPEDLRRQLVKSEYA 100
>sp|O60315|ZEB2_HUMAN Zinc finger E-box-binding homeobox 2 OS=Homo sapiens GN=ZEB2 PE=1
SV=1
Length = 1214
Score = 30.8 bits (68), Expect = 6.9, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 40 EDDVRPDFP--------CPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSVKVA---- 86
E+D+ P P CPYC + + SL H++ H + CP+CS A
Sbjct: 196 ENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFSCPLCSYTFAYRTQ 255
Query: 87 --RDMLSHI--TLQHGHLFKLQRRRRLR 110
R M++H T QH L + R+ +
Sbjct: 256 LERHMVTHKPGTDQHQMLTQGAGNRKFK 283
>sp|Q6N043|Z280D_HUMAN Zinc finger protein 280D OS=Homo sapiens GN=ZNF280D PE=1 SV=3
Length = 979
Score = 30.4 bits (67), Expect = 7.8, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 49 CPYCYEDFDIA-SLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQH 97
C +CY F L H+E H+ T+C IC + + H+ LQH
Sbjct: 360 CQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETE---HVLLQH 406
>sp|Q9H1K0|RBNS5_HUMAN Rabenosyn-5 OS=Homo sapiens GN=ZFYVE20 PE=1 SV=2
Length = 784
Score = 30.4 bits (67), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 33 SIDDFEVEDDVRPDFPCPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSV----KVAR 87
S+DD +VR F CP C +D L SH E+EHS E + I S+ K A+
Sbjct: 3 SLDD---PGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAK 59
Query: 88 DML 90
D L
Sbjct: 60 DRL 62
>sp|Q9R0G7|ZEB2_MOUSE Zinc finger E-box-binding homeobox 2 OS=Mus musculus GN=Zeb2 PE=1
SV=2
Length = 1215
Score = 30.4 bits (67), Expect = 8.4, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 40 EDDVRPDFP--------CPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSVKVA---- 86
E+D+ P P CPYC + + SL H++ H + CP+CS A
Sbjct: 196 ENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFSCPLCSYTFAYRTQ 255
Query: 87 --RDMLSHI--TLQHGHLFKLQRRRRLR 110
R M++H T QH L + R+ +
Sbjct: 256 LERHMVTHKPGTDQHQMLTQGAGNRKFK 283
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,387,287
Number of Sequences: 539616
Number of extensions: 2578128
Number of successful extensions: 7710
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 7626
Number of HSP's gapped (non-prelim): 96
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)