Query 028852
Match_columns 202
No_of_seqs 146 out of 210
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 05:11:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028852.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028852hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2drp_A Protein (tramtrack DNA- 97.7 2.9E-05 9.8E-10 51.0 3.3 53 46-98 10-65 (66)
2 2ct1_A Transcriptional repress 97.6 3.7E-05 1.3E-09 52.2 3.6 55 46-100 15-72 (77)
3 3uk3_C Zinc finger protein 217 97.3 0.0002 6.9E-09 45.3 3.3 51 46-98 4-57 (57)
4 1x5w_A Zinc finger protein 64, 97.1 0.00041 1.4E-08 46.0 3.5 53 45-99 8-63 (70)
5 2yt9_A Zinc finger-containing 97.0 0.00046 1.6E-08 47.8 3.7 51 47-97 36-89 (95)
6 1x6h_A Transcriptional repress 97.0 0.00053 1.8E-08 46.4 3.6 54 46-99 15-73 (86)
7 1bbo_A Human enhancer-binding 97.0 0.00085 2.9E-08 42.3 4.2 51 47-99 2-55 (57)
8 2adr_A ADR1; transcription reg 96.8 0.0013 4.5E-08 41.9 4.2 52 46-99 2-56 (60)
9 2eod_A TNF receptor-associated 96.8 0.00065 2.2E-08 44.9 2.7 48 45-95 9-59 (66)
10 1x6e_A Zinc finger protein 24; 96.8 0.00083 2.8E-08 44.8 3.2 52 46-99 14-68 (72)
11 2cot_A Zinc finger protein 435 96.7 0.0019 6.3E-08 43.5 4.6 53 45-99 17-72 (77)
12 2gqj_A Zinc finger protein KIA 96.7 0.00025 8.7E-09 50.7 0.0 54 45-99 23-80 (98)
13 2ctd_A Zinc finger protein 512 96.6 0.0012 4E-08 47.8 3.2 50 46-98 34-87 (96)
14 2csh_A Zinc finger protein 297 96.6 0.0017 5.8E-08 46.3 3.7 54 46-101 37-93 (110)
15 2dmd_A Zinc finger protein 64, 96.5 0.0019 6.4E-08 44.7 3.5 50 46-97 8-60 (96)
16 2lce_A B-cell lymphoma 6 prote 96.5 0.003 1E-07 42.2 4.4 53 44-98 15-70 (74)
17 2dlq_A GLI-kruppel family memb 96.5 0.0027 9.4E-08 45.5 4.3 53 46-98 35-91 (124)
18 2d9h_A Zinc finger protein 692 96.5 0.0012 4.1E-08 44.5 2.1 55 46-100 7-65 (78)
19 2kmk_A Zinc finger protein GFI 96.4 0.0015 5.2E-08 43.6 2.5 50 46-97 29-81 (82)
20 2rpc_A Zinc finger protein ZIC 96.4 0.003 1E-07 47.5 4.5 57 42-98 21-87 (155)
21 1a1h_A QGSR zinc finger peptid 96.4 0.002 6.8E-08 43.9 3.2 51 46-98 34-87 (90)
22 2wbt_A B-129; zinc finger; 2.7 96.4 0.002 7E-08 47.2 3.3 50 46-99 74-126 (129)
23 2ee8_A Protein ODD-skipped-rel 96.4 0.0039 1.3E-07 43.9 4.6 52 45-98 16-70 (106)
24 2dmd_A Zinc finger protein 64, 96.4 0.004 1.4E-07 43.0 4.4 53 45-99 35-90 (96)
25 2ej4_A Zinc finger protein ZIC 96.2 0.0053 1.8E-07 42.4 4.5 54 45-98 24-87 (95)
26 2lv2_A Insulinoma-associated p 96.2 0.0043 1.5E-07 44.6 4.0 53 45-99 27-82 (85)
27 2dlq_A GLI-kruppel family memb 96.2 0.0031 1E-07 45.2 3.2 53 45-99 65-120 (124)
28 2d9k_A FLN29 gene product; zin 96.2 0.0013 4.4E-08 45.7 1.0 52 45-99 16-68 (75)
29 2kmk_A Zinc finger protein GFI 96.1 0.0029 1E-07 42.2 2.5 50 47-98 2-54 (82)
30 4gzn_C ZFP-57, zinc finger pro 96.1 0.004 1.4E-07 42.0 3.1 51 46-98 4-57 (60)
31 2ee8_A Protein ODD-skipped-rel 96.0 0.0066 2.3E-07 42.7 4.2 53 45-99 44-99 (106)
32 2yt9_A Zinc finger-containing 95.9 0.0045 1.5E-07 42.6 2.9 53 45-99 6-61 (95)
33 1llm_C Chimera of ZIF23-GCN4; 95.9 0.0039 1.3E-07 42.9 2.5 54 46-101 3-59 (88)
34 2dmi_A Teashirt homolog 3; zin 95.6 0.0077 2.6E-07 43.1 3.1 52 46-97 19-76 (115)
35 1wjp_A Zinc finger protein 295 95.6 0.0075 2.6E-07 42.9 2.9 45 46-94 16-63 (107)
36 1ubd_C Protein (YY1 zinc finge 95.3 0.018 6.1E-07 41.5 4.2 50 46-98 5-59 (124)
37 2epx_A Zinc finger protein 28 95.2 0.014 4.9E-07 35.1 3.0 35 46-81 12-47 (47)
38 2gli_A Protein (five-finger GL 95.2 0.0095 3.3E-07 44.5 2.5 51 46-98 67-124 (155)
39 1llm_C Chimera of ZIF23-GCN4; 95.1 0.0014 4.7E-08 45.3 -2.2 52 46-100 31-85 (88)
40 2em0_A Zinc finger protein 224 95.1 0.02 7E-07 34.5 3.4 34 46-81 12-46 (46)
41 2ebt_A Krueppel-like factor 5; 95.1 0.016 5.5E-07 40.0 3.2 55 43-99 12-73 (100)
42 2dlk_A Novel protein; ZF-C2H2 95.1 0.016 5.3E-07 38.6 3.0 52 46-98 7-65 (79)
43 2ytn_A Zinc finger protein 347 95.0 0.022 7.5E-07 34.3 3.4 34 46-81 12-46 (46)
44 2eq0_A Zinc finger protein 347 95.0 0.015 5E-07 35.1 2.6 34 46-81 12-46 (46)
45 2eop_A Zinc finger protein 268 94.9 0.02 6.9E-07 34.4 3.1 34 46-81 12-46 (46)
46 2ghf_A ZHX1, zinc fingers and 94.9 0.015 5.2E-07 43.0 2.9 51 46-96 18-74 (102)
47 1f2i_G Fusion of N-terminal 17 94.9 0.015 5.2E-07 38.3 2.5 49 45-95 18-71 (73)
48 2i13_A AART; DNA binding, zinc 94.9 0.014 4.9E-07 45.3 2.8 51 46-98 105-158 (190)
49 2ema_A Zinc finger protein 347 94.8 0.016 5.6E-07 34.9 2.4 34 46-81 12-46 (46)
50 1a1h_A QGSR zinc finger peptid 94.7 0.017 5.7E-07 39.2 2.6 52 46-99 4-60 (90)
51 1wjp_A Zinc finger protein 295 94.7 0.015 5.2E-07 41.2 2.4 51 46-99 42-95 (107)
52 2lt7_A Transcriptional regulat 94.6 0.016 5.5E-07 44.2 2.4 48 46-95 22-72 (133)
53 2ene_A Zinc finger protein 347 94.6 0.021 7.1E-07 34.4 2.5 34 46-81 12-46 (46)
54 2eoq_A Zinc finger protein 224 94.5 0.025 8.5E-07 34.1 2.7 34 46-81 12-46 (46)
55 2ytr_A Zinc finger protein 347 94.4 0.034 1.2E-06 33.3 3.2 34 46-81 12-46 (46)
56 2ytq_A Zinc finger protein 268 94.4 0.031 1.1E-06 33.7 3.0 34 46-81 12-46 (46)
57 2el4_A Zinc finger protein 268 94.4 0.027 9.2E-07 33.8 2.7 34 46-81 12-46 (46)
58 2em9_A Zinc finger protein 224 94.4 0.028 9.7E-07 33.7 2.7 34 46-81 12-46 (46)
59 2ep2_A Zinc finger protein 484 94.4 0.024 8.3E-07 34.1 2.4 34 46-81 12-46 (46)
60 2eps_A POZ-, at HOOK-, and zin 94.3 0.022 7.7E-07 35.9 2.3 39 46-85 12-51 (54)
61 2j7j_A Transcription factor II 94.3 0.025 8.7E-07 37.6 2.6 50 47-98 2-58 (85)
62 2eov_A Zinc finger protein 484 94.3 0.026 9E-07 33.8 2.4 34 46-81 12-46 (46)
63 2emy_A Zinc finger protein 268 94.2 0.019 6.6E-07 34.6 1.8 34 46-81 12-46 (46)
64 2ytk_A Zinc finger protein 347 94.2 0.019 6.6E-07 34.6 1.7 34 46-81 12-46 (46)
65 1ubd_C Protein (YY1 zinc finge 94.2 0.041 1.4E-06 39.5 3.8 52 46-99 34-90 (124)
66 2em5_A ZFP-95, zinc finger pro 94.2 0.027 9.3E-07 34.0 2.4 34 46-81 12-46 (46)
67 2emk_A Zinc finger protein 28 94.2 0.027 9.4E-07 33.9 2.4 34 46-81 12-46 (46)
68 1tf6_A Protein (transcription 94.2 0.039 1.3E-06 42.8 3.8 51 47-97 73-130 (190)
69 2emf_A Zinc finger protein 484 94.1 0.034 1.2E-06 33.5 2.7 34 46-81 12-46 (46)
70 2eoe_A Zinc finger protein 347 94.0 0.028 9.4E-07 33.7 2.2 34 46-81 12-46 (46)
71 2eq4_A Zinc finger protein 224 94.0 0.032 1.1E-06 33.4 2.5 34 46-81 12-46 (46)
72 2i13_A AART; DNA binding, zinc 94.0 0.027 9.1E-07 43.7 2.6 52 46-99 77-131 (190)
73 2eme_A Zinc finger protein 473 94.0 0.036 1.2E-06 33.2 2.6 34 46-81 12-46 (46)
74 2elz_A Zinc finger protein 224 94.0 0.052 1.8E-06 32.6 3.4 34 46-81 12-46 (46)
75 2csh_A Zinc finger protein 297 93.9 0.037 1.3E-06 39.1 3.0 51 46-99 10-63 (110)
76 2enc_A Zinc finger protein 224 93.9 0.029 9.8E-07 33.8 2.1 34 46-81 12-46 (46)
77 2epz_A Zinc finger protein 28 93.9 0.047 1.6E-06 32.8 3.1 34 46-81 12-46 (46)
78 2ytg_A ZFP-95, zinc finger pro 93.9 0.035 1.2E-06 33.4 2.5 34 46-81 12-46 (46)
79 2ely_A Zinc finger protein 224 93.9 0.027 9.3E-07 34.0 2.0 34 46-81 12-46 (46)
80 2ytj_A Zinc finger protein 484 93.9 0.03 1E-06 33.7 2.1 34 46-81 12-46 (46)
81 2epw_A Zinc finger protein 268 93.9 0.025 8.6E-07 33.9 1.8 34 46-81 12-46 (46)
82 2ytm_A Zinc finger protein 28 93.8 0.025 8.7E-07 34.2 1.7 34 46-81 12-46 (46)
83 2gli_A Protein (five-finger GL 93.8 0.046 1.6E-06 40.7 3.5 53 46-98 3-64 (155)
84 2emh_A Zinc finger protein 484 93.8 0.022 7.4E-07 34.3 1.3 34 46-81 12-46 (46)
85 2em7_A Zinc finger protein 224 93.7 0.043 1.5E-06 32.9 2.7 34 46-81 12-46 (46)
86 2wbs_A Krueppel-like factor 4; 93.6 0.052 1.8E-06 36.6 3.2 51 46-98 5-62 (89)
87 2eml_A Zinc finger protein 28 93.6 0.045 1.5E-06 32.8 2.6 34 46-81 12-46 (46)
88 2j7j_A Transcription factor II 93.6 0.041 1.4E-06 36.5 2.6 47 46-97 31-85 (85)
89 2ytt_A Zinc finger protein 473 93.5 0.029 1E-06 33.8 1.6 34 46-81 12-46 (46)
90 2en6_A Zinc finger protein 268 93.5 0.022 7.5E-07 34.3 1.0 34 46-81 12-46 (46)
91 2ep0_A Zinc finger protein 28 93.4 0.046 1.6E-06 32.8 2.4 34 46-81 12-46 (46)
92 2en1_A Zinc finger protein 224 93.4 0.038 1.3E-06 33.2 1.9 34 46-81 12-46 (46)
93 2eoo_A ZFP-95, zinc finger pro 93.3 0.028 9.7E-07 33.9 1.3 34 46-81 12-46 (46)
94 2ytd_A Zinc finger protein 473 93.3 0.039 1.3E-06 33.2 1.9 34 46-81 12-46 (46)
95 2epr_A POZ-, at HOOK-, and zin 93.3 0.043 1.5E-06 33.5 2.1 36 45-82 11-47 (48)
96 2wbs_A Krueppel-like factor 4; 93.3 0.083 2.8E-06 35.5 3.7 49 45-95 34-87 (89)
97 2ysp_A Zinc finger protein 224 93.2 0.035 1.2E-06 33.4 1.6 34 46-81 12-46 (46)
98 2el6_A Zinc finger protein 268 93.1 0.058 2E-06 32.5 2.5 34 46-81 12-46 (46)
99 2emm_A ZFP-95, zinc finger pro 93.1 0.041 1.4E-06 32.9 1.8 34 46-81 12-46 (46)
100 2en8_A Zinc finger protein 224 93.1 0.059 2E-06 32.2 2.5 34 46-81 12-46 (46)
101 2dmi_A Teashirt homolog 3; zin 93.1 0.028 9.7E-07 40.1 1.2 55 43-99 47-106 (115)
102 2ep3_A Zinc finger protein 484 92.9 0.062 2.1E-06 32.2 2.4 34 46-81 12-46 (46)
103 2lt7_A Transcriptional regulat 92.8 0.042 1.4E-06 41.8 1.9 52 46-99 50-104 (133)
104 2epq_A POZ-, at HOOK-, and zin 92.7 0.045 1.5E-06 32.8 1.6 35 46-82 10-45 (45)
105 2emp_A Zinc finger protein 347 92.7 0.045 1.5E-06 32.9 1.6 34 46-81 12-46 (46)
106 2em8_A Zinc finger protein 224 92.7 0.043 1.5E-06 33.0 1.5 34 46-81 12-46 (46)
107 2yso_A ZFP-95, zinc finger pro 92.4 0.066 2.3E-06 32.1 2.1 34 46-81 12-46 (46)
108 2yu8_A Zinc finger protein 347 92.4 0.042 1.4E-06 33.0 1.1 34 46-81 12-46 (46)
109 2emx_A Zinc finger protein 268 92.4 0.057 1.9E-06 32.1 1.7 34 46-81 10-44 (44)
110 1tf6_A Protein (transcription 92.3 0.13 4.5E-06 39.7 4.2 51 46-98 104-161 (190)
111 2ebt_A Krueppel-like factor 5; 92.3 0.16 5.3E-06 34.8 4.2 51 45-97 44-99 (100)
112 2jp9_A Wilms tumor 1; DNA bind 92.2 0.08 2.7E-06 37.4 2.6 51 46-98 36-91 (119)
113 2rpc_A Zinc finger protein ZIC 92.2 0.12 4.2E-06 38.5 3.7 52 46-99 62-118 (155)
114 2em2_A Zinc finger protein 28 92.0 0.075 2.6E-06 31.9 1.9 34 46-81 12-46 (46)
115 2epa_A Krueppel-like factor 10 91.7 0.27 9.2E-06 32.0 4.6 49 44-94 15-70 (72)
116 2jp9_A Wilms tumor 1; DNA bind 91.6 0.12 4.1E-06 36.5 3.0 51 46-98 6-63 (119)
117 1wge_A Hypothetical protein 26 91.5 0.08 2.7E-06 38.9 1.9 47 30-85 13-62 (83)
118 2ysl_A Tripartite motif-contai 91.3 0.072 2.5E-06 35.7 1.4 47 41-87 15-69 (73)
119 2jr7_A DPH3 homolog; DESR1, CS 91.2 0.069 2.4E-06 39.8 1.4 48 30-86 6-56 (89)
120 1vd4_A Transcription initiatio 91.1 0.082 2.8E-06 34.4 1.6 36 46-85 14-49 (62)
121 1t1h_A Gspef-atpub14, armadill 90.9 0.14 4.6E-06 35.0 2.6 47 40-86 2-54 (78)
122 2ctu_A Zinc finger protein 483 90.7 0.01 3.6E-07 38.5 -3.2 45 46-98 18-64 (73)
123 1wii_A Hypothetical UPF0222 pr 90.7 0.091 3.1E-06 38.7 1.6 37 43-84 20-56 (85)
124 2ep1_A Zinc finger protein 484 90.3 0.24 8.3E-06 29.4 3.0 33 46-80 12-45 (46)
125 1wgm_A Ubiquitin conjugation f 90.2 0.32 1.1E-05 35.6 4.3 39 41-86 17-68 (98)
126 2eq2_A Zinc finger protein 347 89.6 0.34 1.2E-05 28.8 3.3 33 46-80 12-45 (46)
127 1yop_A KTI11P; zinc finger, me 89.2 0.11 3.6E-06 38.2 0.9 47 30-85 6-55 (83)
128 2emg_A Zinc finger protein 484 88.9 0.36 1.2E-05 28.7 3.1 33 46-80 12-45 (46)
129 2em3_A Zinc finger protein 28 88.8 0.19 6.5E-06 30.0 1.7 33 46-80 12-45 (46)
130 2eon_A ZFP-95, zinc finger pro 88.7 0.36 1.2E-05 28.8 3.0 33 46-80 12-45 (46)
131 2kre_A Ubiquitin conjugation f 88.7 0.47 1.6E-05 34.8 4.2 39 41-86 24-74 (100)
132 2yth_A Zinc finger protein 224 88.3 0.42 1.4E-05 28.4 3.1 33 46-80 12-45 (46)
133 2kr4_A Ubiquitin conjugation f 88.3 0.35 1.2E-05 34.3 3.1 39 41-86 9-59 (85)
134 3ztg_A E3 ubiquitin-protein li 88.2 0.077 2.6E-06 37.4 -0.4 46 40-85 7-60 (92)
135 1paa_A Yeast transcription fac 87.9 0.34 1.1E-05 25.6 2.2 26 46-71 2-28 (30)
136 2emi_A Zinc finger protein 484 87.9 0.34 1.2E-05 28.8 2.4 33 46-80 12-45 (46)
137 2ysj_A Tripartite motif-contai 87.7 0.18 6.1E-06 33.0 1.2 18 40-57 14-31 (63)
138 2enf_A Zinc finger protein 347 87.7 0.45 1.6E-05 28.2 3.0 33 46-80 12-45 (46)
139 2yti_A Zinc finger protein 347 87.6 0.43 1.5E-05 28.3 2.8 33 46-80 12-45 (46)
140 2eq1_A Zinc finger protein 347 87.5 0.46 1.6E-05 28.2 2.9 33 46-80 12-45 (46)
141 2ecj_A Tripartite motif-contai 87.2 0.32 1.1E-05 30.9 2.2 18 41-58 10-27 (58)
142 2yts_A Zinc finger protein 484 87.0 0.44 1.5E-05 28.2 2.6 33 46-80 12-45 (46)
143 2eow_A Zinc finger protein 347 86.7 0.31 1.1E-05 28.9 1.8 33 46-80 12-45 (46)
144 2egp_A Tripartite motif-contai 86.5 0.3 1E-05 33.0 1.8 47 41-87 7-65 (79)
145 2csy_A Zinc finger protein 183 86.0 0.14 4.8E-06 35.3 -0.1 48 39-86 8-60 (81)
146 2en9_A Zinc finger protein 28 86.0 0.47 1.6E-05 28.2 2.3 33 46-80 12-45 (46)
147 2emj_A Zinc finger protein 28 85.9 0.31 1.1E-05 29.0 1.5 33 46-80 12-45 (46)
148 2lv2_A Insulinoma-associated p 85.8 0.36 1.2E-05 34.4 2.0 29 46-74 56-85 (85)
149 2ytp_A Zinc finger protein 484 85.8 0.49 1.7E-05 28.1 2.4 33 46-80 12-45 (46)
150 2ytf_A Zinc finger protein 268 85.4 0.47 1.6E-05 28.0 2.1 33 46-80 12-45 (46)
151 2yrj_A Zinc finger protein 473 85.2 0.54 1.8E-05 27.8 2.3 33 46-80 12-45 (46)
152 2ect_A Ring finger protein 126 85.2 0.46 1.6E-05 32.2 2.2 46 41-86 10-63 (78)
153 2eoy_A Zinc finger protein 473 85.2 0.48 1.7E-05 28.2 2.1 34 46-80 12-46 (46)
154 2el5_A Zinc finger protein 268 84.8 0.6 2E-05 27.0 2.4 32 46-79 10-42 (42)
155 2em6_A Zinc finger protein 224 84.7 0.79 2.7E-05 27.1 3.0 33 46-80 12-45 (46)
156 3mjh_B Early endosome antigen 84.7 0.4 1.4E-05 29.7 1.5 27 46-72 5-32 (34)
157 2em4_A Zinc finger protein 28 84.3 0.46 1.6E-05 28.3 1.7 33 46-80 12-45 (46)
158 2ecw_A Tripartite motif-contai 84.3 0.29 9.9E-06 33.2 0.9 47 41-87 14-71 (85)
159 2f42_A STIP1 homology and U-bo 84.2 0.63 2.2E-05 38.1 3.0 41 40-86 100-152 (179)
160 1wir_A Protein arginine N-meth 84.2 0.56 1.9E-05 36.4 2.6 32 44-75 13-45 (121)
161 2yrm_A B-cell lymphoma 6 prote 84.1 0.63 2.2E-05 27.4 2.3 33 46-80 10-43 (43)
162 2ct5_A Zinc finger BED domain 83.5 0.5 1.7E-05 33.6 1.9 33 74-106 28-65 (73)
163 2eor_A Zinc finger protein 224 83.4 0.46 1.6E-05 28.1 1.4 33 46-80 12-45 (46)
164 3hcs_A TNF receptor-associated 83.2 0.69 2.4E-05 36.1 2.8 46 46-94 82-130 (170)
165 2k5c_A Uncharacterized protein 83.2 0.31 1.1E-05 36.2 0.7 38 47-84 9-60 (95)
166 2epu_A Zinc finger protein 32; 82.9 0.52 1.8E-05 27.9 1.5 33 46-80 12-45 (45)
167 2eom_A ZFP-95, zinc finger pro 82.8 0.76 2.6E-05 27.3 2.3 33 46-80 12-45 (46)
168 1klr_A Zinc finger Y-chromosom 82.3 0.65 2.2E-05 24.1 1.7 23 46-68 2-25 (30)
169 2ecv_A Tripartite motif-contai 82.3 0.31 1.1E-05 33.0 0.4 47 41-87 14-71 (85)
170 2c2l_A CHIP, carboxy terminus 82.0 1.1 3.8E-05 36.7 3.7 40 41-86 203-254 (281)
171 2adr_A ADR1; transcription reg 82.0 0.79 2.7E-05 28.5 2.2 28 46-73 30-58 (60)
172 2en7_A Zinc finger protein 268 81.7 1.2 4.2E-05 25.7 2.9 32 46-79 12-44 (44)
173 2ecy_A TNF receptor-associated 81.7 0.46 1.6E-05 31.3 1.1 46 42-87 11-62 (66)
174 2dlk_A Novel protein; ZF-C2H2 81.7 0.68 2.3E-05 30.3 1.9 37 46-84 38-77 (79)
175 2ent_A Krueppel-like factor 15 81.6 1 3.6E-05 26.6 2.6 34 46-81 12-48 (48)
176 2eof_A Zinc finger protein 268 81.4 0.77 2.6E-05 26.7 1.9 32 46-79 12-44 (44)
177 2ct1_A Transcriptional repress 81.3 0.63 2.1E-05 30.7 1.6 29 45-73 44-73 (77)
178 1zw8_A Zinc-responsive transcr 80.8 1.9 6.5E-05 29.0 4.0 46 52-97 9-64 (64)
179 2yuc_A TNF receptor-associated 80.8 1 3.4E-05 30.7 2.6 47 45-93 15-63 (76)
180 2enh_A Zinc finger protein 28 80.4 1.5 5E-05 25.9 3.0 32 46-79 12-44 (46)
181 2eoz_A Zinc finger protein 473 80.3 0.53 1.8E-05 28.0 0.9 33 46-80 12-45 (46)
182 1bor_A Transcription factor PM 80.3 1.2 4E-05 28.8 2.6 43 44-86 4-48 (56)
183 2emz_A ZFP-95, zinc finger pro 80.1 0.68 2.3E-05 27.5 1.3 33 46-80 12-45 (46)
184 1e4u_A Transcriptional repress 80.0 0.76 2.6E-05 32.3 1.8 44 43-87 8-62 (78)
185 2yur_A Retinoblastoma-binding 79.9 0.35 1.2E-05 32.9 -0.1 44 41-84 10-61 (74)
186 2eq3_A Zinc finger protein 347 79.3 1.1 3.6E-05 26.4 2.1 32 46-79 12-44 (46)
187 2eoh_A Zinc finger protein 28 79.3 1.3 4.4E-05 26.2 2.4 32 46-79 12-44 (46)
188 1x6h_A Transcriptional repress 79.3 1.1 3.8E-05 29.5 2.4 37 45-83 46-83 (86)
189 2kiz_A E3 ubiquitin-protein li 78.9 0.42 1.5E-05 31.6 0.1 45 42-86 10-62 (69)
190 1twf_L ABC10-alpha, DNA-direct 78.9 0.63 2.2E-05 32.9 1.0 31 43-85 25-55 (70)
191 1znf_A 31ST zinc finger from X 78.8 1.6 5.4E-05 22.3 2.4 20 47-66 2-22 (27)
192 2yte_A Zinc finger protein 473 78.7 1.6 5.4E-05 25.0 2.7 31 46-78 10-41 (42)
193 6rxn_A Rubredoxin; electron tr 78.6 0.68 2.3E-05 30.3 1.1 32 46-83 4-38 (46)
194 2elp_A Zinc finger protein 406 78.2 0.57 1.9E-05 26.3 0.5 21 46-66 9-31 (37)
195 1ard_A Yeast transcription fac 78.2 1.3 4.4E-05 22.9 2.0 22 46-67 2-24 (29)
196 2l6l_A DNAJ homolog subfamily 77.1 0.42 1.5E-05 37.3 -0.3 51 34-94 99-152 (155)
197 2elu_A Zinc finger protein 406 76.9 0.74 2.5E-05 28.6 0.8 25 47-71 10-35 (37)
198 3pwf_A Rubrerythrin; non heme 76.9 0.94 3.2E-05 36.6 1.6 27 44-84 136-162 (170)
199 1p7a_A BF3, BKLF, kruppel-like 76.7 1.7 5.7E-05 24.2 2.3 22 46-67 11-33 (37)
200 2m0f_A Zinc finger and BTB dom 76.6 1 3.6E-05 23.2 1.3 21 46-66 2-23 (29)
201 3iuf_A Zinc finger protein UBI 76.6 1.1 3.6E-05 27.4 1.5 25 47-71 8-33 (48)
202 2d8t_A Dactylidin, ring finger 76.6 1.3 4.4E-05 29.6 2.1 48 43-90 12-64 (71)
203 2ct2_A Tripartite motif protei 76.5 2 6.8E-05 29.3 3.1 47 41-87 10-68 (88)
204 2emb_A Zinc finger protein 473 76.5 1.7 5.9E-05 25.2 2.4 32 46-79 12-44 (44)
205 2yto_A Zinc finger protein 484 76.2 1 3.5E-05 26.7 1.3 32 46-79 12-44 (46)
206 2m0e_A Zinc finger and BTB dom 75.9 1.2 4.2E-05 22.8 1.5 21 46-66 2-23 (29)
207 2ytb_A Zinc finger protein 32; 75.5 2.8 9.6E-05 23.8 3.2 22 46-67 11-33 (42)
208 3uk3_C Zinc finger protein 217 75.2 0.91 3.1E-05 27.8 0.9 24 46-69 32-56 (57)
209 2djb_A Polycomb group ring fin 74.9 0.44 1.5E-05 32.1 -0.7 47 41-87 10-62 (72)
210 2d9h_A Zinc finger protein 692 74.9 1.9 6.6E-05 28.2 2.6 28 46-73 38-66 (78)
211 2eoj_A Zinc finger protein 268 74.8 1.6 5.3E-05 25.4 1.9 32 46-79 12-44 (44)
212 2els_A Zinc finger protein 406 74.7 1.2 4E-05 24.7 1.3 22 46-67 9-31 (36)
213 2m0d_A Zinc finger and BTB dom 74.7 1.3 4.6E-05 22.8 1.4 22 46-67 3-25 (30)
214 2k5c_A Uncharacterized protein 74.7 0.68 2.3E-05 34.4 0.2 12 45-56 50-61 (95)
215 1rik_A E6APC1 peptide; E6-bind 74.4 1.2 4E-05 23.2 1.1 20 47-66 3-23 (29)
216 2ea6_A Ring finger protein 4; 74.3 0.69 2.4E-05 30.2 0.2 44 42-85 11-66 (69)
217 4ayb_P DNA-directed RNA polyme 74.2 2.4 8.2E-05 28.2 2.8 11 44-54 21-31 (48)
218 3htk_C E3 SUMO-protein ligase 74.0 1.5 5.3E-05 38.3 2.4 42 44-85 179-230 (267)
219 1iym_A EL5; ring-H2 finger, ub 73.7 0.63 2.2E-05 29.3 -0.1 40 46-85 5-53 (55)
220 2kvh_A Zinc finger and BTB dom 73.7 1.3 4.3E-05 22.9 1.1 21 46-66 3-24 (27)
221 2eou_A Zinc finger protein 473 73.2 2.2 7.7E-05 24.8 2.3 32 46-79 12-44 (44)
222 2elx_A Zinc finger protein 406 73.2 2.4 8.1E-05 23.0 2.3 8 47-54 8-15 (35)
223 2drp_A Protein (tramtrack DNA- 73.1 1.1 3.9E-05 28.3 1.0 25 46-70 40-65 (66)
224 2kvf_A Zinc finger and BTB dom 72.1 2.4 8.2E-05 21.8 2.1 20 46-65 3-23 (28)
225 1srk_A Zinc finger protein ZFP 72.0 3.2 0.00011 22.6 2.7 19 47-65 8-27 (35)
226 2ep4_A Ring finger protein 24; 71.8 0.93 3.2E-05 30.3 0.4 44 42-85 11-62 (74)
227 2lvr_A Zinc finger and BTB dom 73.7 0.85 2.9E-05 23.8 0.0 22 46-67 3-25 (30)
228 2elr_A Zinc finger protein 406 70.6 2.4 8E-05 23.2 1.9 21 46-66 9-30 (36)
229 2yu5_A Zinc finger protein 473 70.6 1.9 6.3E-05 25.1 1.5 21 46-66 12-33 (44)
230 2elm_A Zinc finger protein 406 70.1 1.5 5.1E-05 24.8 0.9 25 46-70 9-34 (37)
231 2lcq_A Putative toxin VAPC6; P 70.1 1.1 3.7E-05 35.3 0.4 29 44-85 130-158 (165)
232 2ept_A Zinc finger protein 32; 70.0 3.2 0.00011 23.6 2.5 21 46-66 10-31 (41)
233 2i5o_A DNA polymerase ETA; zin 69.9 1.1 3.6E-05 28.4 0.3 24 45-69 8-31 (39)
234 2elt_A Zinc finger protein 406 69.4 1.8 6.3E-05 23.7 1.3 21 46-66 9-30 (36)
235 2elo_A Zinc finger protein 406 69.1 1.4 4.9E-05 24.4 0.7 22 46-67 9-31 (37)
236 3fl2_A E3 ubiquitin-protein li 68.9 0.85 2.9E-05 33.8 -0.4 42 44-86 50-98 (124)
237 1rim_A E6APC2 peptide; E6-bind 68.8 2.7 9.3E-05 23.1 1.9 20 47-66 3-23 (33)
238 1wim_A KIAA0161 protein; ring 68.8 1.2 4.2E-05 31.5 0.5 50 45-94 4-73 (94)
239 1x5w_A Zinc finger protein 64, 68.5 1.9 6.3E-05 27.7 1.3 26 46-71 37-63 (70)
240 1e8j_A Rubredoxin; iron-sulfur 68.2 2.9 0.0001 27.7 2.2 14 41-54 31-44 (52)
241 1lko_A Rubrerythrin all-iron(I 68.2 0.88 3E-05 37.1 -0.5 27 45-84 154-180 (191)
242 1bbo_A Human enhancer-binding 68.2 2.2 7.4E-05 26.0 1.5 24 46-69 29-53 (57)
243 2ckl_B Ubiquitin ligase protei 67.8 0.36 1.2E-05 37.7 -2.8 44 42-85 50-100 (165)
244 2lvt_A Zinc finger and BTB dom 71.0 1.1 3.7E-05 23.4 0.0 21 46-66 2-23 (29)
245 2elq_A Zinc finger protein 406 67.7 3.9 0.00013 22.5 2.4 20 46-65 9-29 (36)
246 2yuc_A TNF receptor-associated 67.6 3.9 0.00013 27.6 2.9 33 44-79 42-74 (76)
247 2lvu_A Zinc finger and BTB dom 70.6 1.1 3.9E-05 22.9 0.0 21 46-66 2-23 (26)
248 2l0b_A E3 ubiquitin-protein li 67.0 0.95 3.2E-05 32.0 -0.5 43 44-86 38-88 (91)
249 2kvg_A Zinc finger and BTB dom 66.9 1.7 5.8E-05 22.6 0.7 21 46-66 3-24 (27)
250 1yuz_A Nigerythrin; rubrythrin 66.5 2.1 7.2E-05 35.3 1.5 26 45-84 170-195 (202)
251 2elv_A Zinc finger protein 406 65.8 2.5 8.6E-05 23.3 1.3 22 46-67 9-31 (36)
252 3l11_A E3 ubiquitin-protein li 65.2 2.3 7.8E-05 30.9 1.3 43 44-87 13-62 (115)
253 2en3_A ZFP-95, zinc finger pro 65.2 1.6 5.6E-05 25.6 0.4 21 46-66 12-33 (46)
254 1ffk_W Ribosomal protein L37AE 64.9 1.6 5.5E-05 31.2 0.4 16 42-57 23-39 (73)
255 2l7x_A Envelope glycoprotein; 63.8 2.4 8.2E-05 30.5 1.1 20 46-65 30-49 (77)
256 2eos_A B-cell lymphoma 6 prote 63.7 4.4 0.00015 23.1 2.2 25 46-71 11-36 (42)
257 2ghf_A ZHX1, zinc fingers and 63.7 2 7E-05 31.3 0.8 38 46-84 50-88 (102)
258 1x4j_A Ring finger protein 38; 62.8 1.1 3.7E-05 30.2 -0.8 43 43-85 20-70 (75)
259 2ea5_A Cell growth regulator w 62.2 2.1 7.3E-05 29.0 0.6 43 44-87 13-58 (68)
260 1njq_A Superman protein; zinc- 61.7 3.5 0.00012 23.2 1.5 22 46-67 6-28 (39)
261 1v87_A Deltex protein 2; ring- 61.6 0.96 3.3E-05 32.8 -1.3 40 46-85 25-92 (114)
262 2epc_A Zinc finger protein 32; 61.5 4.3 0.00015 23.0 1.8 21 46-66 11-32 (42)
263 3jyw_9 60S ribosomal protein L 61.3 2.9 9.9E-05 29.8 1.2 16 42-57 22-38 (72)
264 2kfq_A FP1; protein, de novo p 61.2 3.7 0.00013 22.3 1.5 20 47-66 3-23 (32)
265 1x6e_A Zinc finger protein 24; 60.9 3.1 0.0001 26.9 1.2 23 46-68 42-65 (72)
266 2epv_A Zinc finger protein 268 60.7 5.7 0.00019 23.0 2.3 21 46-66 12-33 (44)
267 1wir_A Protein arginine N-meth 60.7 5.2 0.00018 30.9 2.7 33 71-103 11-45 (121)
268 3j21_i 50S ribosomal protein L 60.7 2.9 0.0001 30.6 1.1 13 42-54 31-43 (83)
269 2e72_A POGO transposable eleme 60.3 4.8 0.00016 26.8 2.0 22 45-66 11-33 (49)
270 1jm7_B BARD1, BRCA1-associated 60.2 2.8 9.5E-05 30.8 1.0 41 45-85 21-65 (117)
271 2en2_A B-cell lymphoma 6 prote 59.8 4 0.00014 23.2 1.5 24 46-70 11-35 (42)
272 3vhs_A ATPase wrnip1; zinc fin 59.5 4.3 0.00015 23.9 1.5 19 75-93 6-25 (29)
273 2ckl_A Polycomb group ring fin 59.4 1 3.5E-05 32.5 -1.5 42 43-86 12-61 (108)
274 3iz5_m 60S ribosomal protein L 59.4 3.2 0.00011 30.9 1.2 32 42-85 32-64 (92)
275 2kdx_A HYPA, hydrogenase/ureas 59.4 2.4 8.3E-05 31.8 0.5 30 42-84 69-99 (119)
276 3izc_m 60S ribosomal protein R 58.6 3.2 0.00011 30.9 1.1 32 42-85 32-64 (92)
277 2y43_A E3 ubiquitin-protein li 57.7 2.4 8.4E-05 29.9 0.3 44 44-87 20-69 (99)
278 4a17_Y RPL37A, 60S ribosomal p 56.8 3.4 0.00011 31.5 0.9 32 42-85 32-64 (103)
279 2yu4_A E3 SUMO-protein ligase 56.8 6.6 0.00023 27.9 2.5 40 44-84 5-59 (94)
280 2cot_A Zinc finger protein 435 56.6 7.3 0.00025 25.3 2.5 25 46-71 46-71 (77)
281 1vq8_Z 50S ribosomal protein L 56.6 3.3 0.00011 30.0 0.9 32 43-85 24-55 (83)
282 1z6u_A NP95-like ring finger p 56.1 2 6.9E-05 33.4 -0.4 44 43-87 75-125 (150)
283 2gqj_A Zinc finger protein KIA 55.9 5.8 0.0002 27.4 2.0 26 46-71 54-80 (98)
284 4gzn_C ZFP-57, zinc finger pro 55.2 6.9 0.00023 25.7 2.2 26 46-72 32-58 (60)
285 1jm7_A BRCA1, breast cancer ty 54.8 2.4 8.1E-05 30.3 -0.2 43 45-87 20-70 (112)
286 2jr6_A UPF0434 protein NMA0874 54.7 6 0.0002 27.6 1.9 31 42-83 4-34 (68)
287 3h0g_L DNA-directed RNA polyme 54.3 7 0.00024 27.1 2.2 30 44-85 19-48 (63)
288 3ng2_A RNF4, snurf, ring finge 53.2 1.2 3.9E-05 29.4 -2.0 43 45-87 9-63 (71)
289 2epp_A POZ-, at HOOK-, and zin 53.1 8.1 0.00028 26.1 2.3 35 46-83 13-48 (66)
290 1yui_A GAGA-factor; complex (D 53.0 5.5 0.00019 24.3 1.4 22 46-67 24-46 (54)
291 3lrq_A E3 ubiquitin-protein li 52.3 2.1 7.3E-05 30.7 -0.8 44 44-87 20-70 (100)
292 3flo_B DNA polymerase alpha ca 52.0 3 0.0001 34.8 0.0 39 44-85 20-59 (206)
293 4ayc_A E3 ubiquitin-protein li 51.5 3.3 0.00011 31.3 0.2 41 45-85 52-97 (138)
294 3cc2_Z 50S ribosomal protein L 51.4 4.4 0.00015 31.4 0.9 32 42-85 56-88 (116)
295 2jvx_A NF-kappa-B essential mo 51.4 6.4 0.00022 23.2 1.4 19 46-64 3-22 (28)
296 1dl6_A Transcription factor II 51.3 5.2 0.00018 26.8 1.1 37 44-91 9-46 (58)
297 1sp2_A SP1F2; zinc finger, tra 51.3 11 0.00037 19.7 2.3 22 46-67 2-26 (31)
298 2js4_A UPF0434 protein BB2007; 50.9 6.6 0.00023 27.5 1.6 31 42-83 4-34 (70)
299 2qgp_A HNH endonuclease; Q39X4 50.9 3.5 0.00012 30.8 0.2 40 45-84 34-79 (112)
300 2xeu_A Ring finger protein 4; 50.9 1.1 3.9E-05 28.6 -2.2 42 46-87 3-56 (64)
301 4ap4_A E3 ubiquitin ligase RNF 50.3 5.4 0.00018 28.8 1.2 37 46-87 48-84 (133)
302 1s24_A Rubredoxin 2; electron 49.6 5.7 0.00019 29.2 1.2 8 45-52 34-41 (87)
303 1yk4_A Rubredoxin, RD; electro 49.2 6.1 0.00021 26.1 1.2 14 41-54 30-43 (52)
304 2v3b_B Rubredoxin 2, rubredoxi 48.9 6.1 0.00021 26.4 1.1 14 41-54 31-44 (55)
305 2kn9_A Rubredoxin; metalloprot 48.5 7.1 0.00024 28.3 1.5 14 41-54 55-68 (81)
306 1zfd_A SWI5; DNA binding motif 48.3 13 0.00045 19.4 2.4 22 46-67 3-27 (32)
307 3a43_A HYPD, hydrogenase nicke 48.1 4.3 0.00015 31.6 0.3 43 42-84 66-116 (139)
308 2eox_A Zinc finger protein 473 47.9 8.5 0.00029 22.1 1.6 19 47-65 13-32 (44)
309 2pk7_A Uncharacterized protein 46.9 7.1 0.00024 27.3 1.3 31 42-83 4-34 (69)
310 2hf1_A Tetraacyldisaccharide-1 46.9 6.1 0.00021 27.5 0.9 31 42-83 4-34 (68)
311 4rxn_A Rubredoxin; electron tr 46.7 7 0.00024 26.2 1.2 14 41-54 31-44 (54)
312 2wbt_A B-129; zinc finger; 2.7 46.4 10 0.00035 27.0 2.1 25 46-70 100-125 (129)
313 2ctd_A Zinc finger protein 512 46.3 10 0.00034 26.6 2.0 26 46-71 62-88 (96)
314 1pft_A TFIIB, PFTFIIBN; N-term 46.2 7.8 0.00027 24.6 1.3 35 45-90 4-39 (50)
315 1rmd_A RAG1; V(D)J recombinati 46.1 1.9 6.5E-05 31.4 -1.9 46 42-87 19-70 (116)
316 1fv5_A First zinc finger of U- 45.4 6.8 0.00023 23.4 0.8 20 46-65 8-28 (36)
317 3knv_A TNF receptor-associated 45.2 2.5 8.5E-05 32.6 -1.5 43 41-84 26-75 (141)
318 1l8d_A DNA double-strand break 45.0 5.4 0.00018 29.1 0.4 10 48-57 49-58 (112)
319 1dx8_A Rubredoxin; electron tr 44.4 7.9 0.00027 27.1 1.2 14 41-54 35-48 (70)
320 2czr_A TBP-interacting protein 44.1 4.8 0.00016 34.0 0.0 25 43-67 151-175 (226)
321 1x6f_A Zinc finger protein 462 42.9 1.8 6.3E-05 30.5 -2.4 51 46-100 25-76 (88)
322 2jny_A Uncharacterized BCR; st 42.9 10 0.00036 26.3 1.6 32 41-83 5-36 (67)
323 2djr_A Zinc finger BED domain- 42.1 12 0.0004 26.7 1.8 29 75-103 28-65 (76)
324 3sp4_A Aprataxin-like protein; 41.6 9.5 0.00032 31.9 1.4 25 44-68 167-193 (204)
325 2a25_A Ubiquitin ligase SIAH1; 41.5 8.3 0.00028 31.3 1.1 11 88-98 54-64 (193)
326 3pih_A Uvrabc system protein A 41.3 11 0.00039 37.6 2.2 36 44-84 247-282 (916)
327 3hct_A TNF receptor-associated 40.7 6.9 0.00024 28.6 0.4 47 41-87 13-65 (118)
328 3h0l_B Aspartyl/glutamyl-tRNA( 39.9 9.7 0.00033 35.7 1.4 22 65-86 27-48 (478)
329 2ecn_A Ring finger protein 141 39.4 3.2 0.00011 27.2 -1.5 45 42-86 11-59 (70)
330 3al0_B Aspartyl/glutamyl-tRNA( 39.4 10 0.00034 35.6 1.4 18 69-86 30-47 (482)
331 3mkr_B Coatomer subunit alpha; 39.3 15 0.0005 32.8 2.4 32 46-90 278-310 (320)
332 4ic3_A E3 ubiquitin-protein li 39.0 8.8 0.0003 25.9 0.7 43 44-87 22-67 (74)
333 3bhp_A UPF0291 protein YNZC; N 39.0 20 0.00068 24.7 2.5 22 170-194 20-41 (60)
334 3ip4_B Aspartyl/glutamyl-tRNA( 38.3 11 0.00036 35.5 1.4 22 65-86 25-46 (483)
335 2eln_A Zinc finger protein 406 37.4 14 0.00046 22.1 1.3 21 46-66 9-32 (38)
336 2ecm_A Ring finger and CHY zin 37.4 4.3 0.00015 25.2 -1.0 40 46-85 5-53 (55)
337 1va1_A Transcription factor SP 36.9 15 0.0005 20.3 1.4 21 46-66 8-31 (37)
338 3t6p_A Baculoviral IAP repeat- 36.4 10 0.00034 33.7 0.9 42 44-86 293-337 (345)
339 2ab3_A ZNF29; zinc finger prot 35.9 12 0.00042 18.7 0.9 20 47-66 3-25 (29)
340 2kpi_A Uncharacterized protein 35.6 17 0.00057 24.2 1.7 31 40-83 4-36 (56)
341 1x3c_A Zinc finger protein 292 34.1 21 0.00073 25.4 2.1 32 46-78 27-61 (73)
342 3dpl_R Ring-box protein 1; ubi 34.1 5.4 0.00018 29.5 -1.1 37 48-84 39-98 (106)
343 2akl_A PHNA-like protein PA012 33.9 16 0.00055 29.0 1.5 28 45-84 26-53 (138)
344 3kfu_F Aspartyl/glutamyl-tRNA( 33.7 14 0.00047 34.7 1.3 17 70-86 30-46 (466)
345 2ecl_A Ring-box protein 2; RNF 32.9 6.1 0.00021 27.2 -1.0 11 75-85 64-74 (81)
346 1bhi_A CRE-BP1, ATF-2; CRE bin 32.6 20 0.00067 19.6 1.4 21 46-66 6-29 (38)
347 4a0k_B E3 ubiquitin-protein li 32.0 9.7 0.00033 28.9 0.0 37 48-84 50-109 (117)
348 4dvc_A Thiol:disulfide interch 31.2 5.9 0.0002 29.7 -1.4 10 45-54 29-38 (184)
349 2jsp_A Transcriptional regulat 31.2 27 0.00091 25.6 2.3 31 71-102 17-47 (87)
350 1chc_A Equine herpes virus-1 r 30.7 9.6 0.00033 24.6 -0.2 41 46-86 5-51 (68)
351 2jvm_A Uncharacterized protein 29.9 17 0.00058 26.3 1.0 15 45-59 52-66 (80)
352 2r6f_A Excinuclease ABC subuni 29.5 16 0.00054 37.1 1.0 36 44-84 265-300 (972)
353 2gmg_A Hypothetical protein PF 29.1 29 0.00098 26.3 2.2 28 45-84 66-93 (105)
354 2lv9_A Histone-lysine N-methyl 28.9 32 0.0011 24.9 2.4 11 74-84 66-76 (98)
355 2k9h_A Glycoprotein; hantaviru 28.6 27 0.00091 23.8 1.7 10 75-84 28-37 (57)
356 2jvd_A UPF0291 protein YNZC; s 28.2 21 0.00071 24.1 1.1 22 170-194 20-41 (54)
357 2jne_A Hypothetical protein YF 28.1 10 0.00034 28.7 -0.5 53 47-103 33-92 (101)
358 3k7a_M Transcription initiatio 28.0 23 0.0008 30.9 1.8 41 42-91 17-58 (345)
359 2ygr_A Uvrabc system protein A 27.4 27 0.00092 35.5 2.3 35 45-84 274-309 (993)
360 2jrr_A Uncharacterized protein 27.3 17 0.00059 25.4 0.6 12 45-56 39-50 (67)
361 3mv2_A Coatomer subunit alpha; 26.3 19 0.00064 32.2 0.8 31 45-88 286-317 (325)
362 3mhs_C SAGA-associated factor 26.1 21 0.0007 26.9 0.9 23 44-66 68-90 (99)
363 3vk6_A E3 ubiquitin-protein li 26.1 42 0.0014 25.2 2.6 47 46-100 37-88 (101)
364 2ecg_A Baculoviral IAP repeat- 25.8 17 0.00057 24.4 0.3 44 43-87 22-68 (75)
365 2yho_A E3 ubiquitin-protein li 25.8 15 0.00053 25.2 0.2 42 45-87 17-61 (79)
366 2bai_A Genome polyprotein; zin 25.5 6.9 0.00024 23.7 -1.5 9 76-84 17-25 (32)
367 2znm_A Thiol:disulfide interch 24.8 24 0.00082 26.8 1.1 19 45-63 30-49 (195)
368 2vje_B MDM4 protein; proto-onc 24.4 5.2 0.00018 26.4 -2.4 42 45-86 6-55 (63)
369 1p91_A Ribosomal RNA large sub 23.8 14 0.0005 29.5 -0.4 12 47-58 3-14 (269)
370 2hep_A UPF0291 protein YNZC; S 23.6 39 0.0013 24.7 2.0 22 170-194 20-41 (85)
371 2j9u_B VPS36, vacuolar protein 23.3 23 0.00078 25.5 0.6 11 74-84 16-26 (76)
372 3alr_A Nanos protein; zinc-fin 23.2 14 0.00048 28.1 -0.5 40 45-84 35-80 (106)
373 2fiy_A Protein FDHE homolog; F 22.6 20 0.00069 31.5 0.3 11 44-54 180-190 (309)
374 2jz8_A Uncharacterized protein 22.2 26 0.00088 25.8 0.8 14 45-58 47-60 (87)
375 1ncs_A Peptide M30F, transcrip 21.7 40 0.0014 19.7 1.5 22 74-95 17-42 (47)
376 1i7f_A Heat shock protein 33; 21.7 19 0.00066 31.2 0.0 10 75-84 260-269 (292)
377 3gn3_A Putative protein-disulf 21.0 12 0.00041 29.5 -1.4 21 44-64 21-42 (182)
378 2gag_D Heterotetrameric sarcos 20.7 17 0.0006 27.2 -0.4 7 47-53 4-10 (99)
379 1qyp_A RNA polymerase II; tran 20.6 25 0.00086 22.8 0.4 37 46-84 15-52 (57)
380 3f2b_A DNA-directed DNA polyme 20.5 28 0.00095 35.6 0.8 50 27-84 485-536 (1041)
381 3noy_A 4-hydroxy-3-methylbut-2 20.4 37 0.0013 30.9 1.5 23 45-67 270-293 (366)
382 2l8e_A Polyhomeotic-like prote 20.4 42 0.0014 21.9 1.4 13 45-57 17-29 (49)
383 1qxf_A GR2, 30S ribosomal prot 20.3 58 0.002 22.7 2.2 29 47-85 8-36 (66)
384 1k3x_A Endonuclease VIII; hydr 20.0 21 0.00071 30.3 -0.2 28 46-82 234-261 (262)
No 1
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.67 E-value=2.9e-05 Score=50.95 Aligned_cols=53 Identities=26% Similarity=0.666 Sum_probs=44.8
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|+.|+..| ....|..|....|..+.+...||+|.... ..+|..|+...|+
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 10 TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred ceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 69999999954 67889999888786667889999998875 5689999998886
No 2
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.64 E-value=3.7e-05 Score=52.17 Aligned_cols=55 Identities=20% Similarity=0.384 Sum_probs=46.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccch
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHL 100 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~~ 100 (202)
.|.|++|+. -.....|..|+...|..+.+...|++|.... ..+|..|+...|+..
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 72 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence 599999999 5567899999988888777889999998875 568999999988763
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.26 E-value=0.0002 Score=45.31 Aligned_cols=51 Identities=24% Similarity=0.386 Sum_probs=39.4
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|++|+. --....|..|+.. |.. .+...||+|.... ..+|..|+...|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 699999999 5567889999775 433 4568999998864 5689999988875
No 4
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.07 E-value=0.00041 Score=46.02 Aligned_cols=53 Identities=23% Similarity=0.333 Sum_probs=42.1
Q ss_pred CcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.|++|+. --....|..|+.. |.. .+...|++|.... ..+|..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 3699999999 4467889999876 544 4568999998875 56899999888875
No 5
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.05 E-value=0.00046 Score=47.80 Aligned_cols=51 Identities=20% Similarity=0.406 Sum_probs=22.6
Q ss_pred ccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcc
Q 028852 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (202)
Q Consensus 47 F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H 97 (202)
|.|++|+. --....|..|+...|....+...|++|.... ..+|..|+...|
T Consensus 36 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H 89 (95)
T 2yt9_A 36 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89 (95)
T ss_dssp EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTS
T ss_pred CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhc
Confidence 55555555 2234445555443332223444555554432 234455554333
No 6
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.01 E-value=0.00053 Score=46.45 Aligned_cols=54 Identities=20% Similarity=0.320 Sum_probs=43.8
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCC--CCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCE--SKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e--~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|++|+. -.....|..|+...|... .+...|++|.... ..+|..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 599999999 556778999988777654 3678999998875 56899999888775
No 7
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.98 E-value=0.00085 Score=42.33 Aligned_cols=51 Identities=16% Similarity=0.341 Sum_probs=39.6
Q ss_pred ccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 47 FPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 47 F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
|.|+.|+.. -....|..|+.. |.. .+...|++|.... ..+|..|+...|+.
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 55 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence 899999994 467889999865 443 4668999998875 56899999776653
No 8
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.83 E-value=0.0013 Score=41.95 Aligned_cols=52 Identities=23% Similarity=0.455 Sum_probs=39.8
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|+.|+..| ....|..|+.. |.. .+...|++|.... ..+|..|+...|..
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 56 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence 48999999954 67889999876 543 4568999998875 56889998666643
No 9
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.82 E-value=0.00065 Score=44.86 Aligned_cols=48 Identities=29% Similarity=0.675 Sum_probs=39.3
Q ss_pred CcccCCCCCCCCCHHHhhhhcccccCCCCCceecC-CCcccc--hhhhhhhhhh
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP-ICSVKV--ARDMLSHITL 95 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCP-VCa~~v--s~d~i~Hl~~ 95 (202)
..|.|++|+..|....|..|... ...++..|+ +|.... ..+|..|+..
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 36999999998878899999875 556789999 998763 5588899865
No 10
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.81 E-value=0.00083 Score=44.84 Aligned_cols=52 Identities=17% Similarity=0.303 Sum_probs=40.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|++|+. --....|..|+.. |.. .+...|++|.... ..+|..|+...++-
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 68 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHTSG 68 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred CccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence 699999999 4467889999775 433 4678999998875 56889998776543
No 11
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.74 E-value=0.0019 Score=43.52 Aligned_cols=53 Identities=21% Similarity=0.479 Sum_probs=40.9
Q ss_pred CcccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.|++|+..| ....|..|+.. |.. .+...|++|.... ..+|..|+...++.
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 72 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGS 72 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCCC
Confidence 469999999955 57889999865 443 4568999998875 56899999876653
No 12
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.71 E-value=0.00025 Score=50.66 Aligned_cols=54 Identities=19% Similarity=0.310 Sum_probs=42.5
Q ss_pred CcccCCCCCCCC--CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYEDF--DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e~~--dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.|++|+..| ....|..|+...| ...+...|++|.... ..+|..|+...|+.
T Consensus 23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~-~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQ-KLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp SCCCCTTTCCCCSSCSHHHHHHHHHHH-HHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CCcCCCCCCCChhhhHHHHHHHHHHHc-CCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 369999999966 5789999986543 324578999998875 56899999888875
No 13
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.64 E-value=0.0012 Score=47.78 Aligned_cols=50 Identities=24% Similarity=0.505 Sum_probs=39.9
Q ss_pred cccCCCCCCCC--CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYEDF--DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e~~--dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|+.|++.| ....|..|+.. | ..+...|++|.... ..+|..|+...|.
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 69999999988 78999999764 6 56788999998875 5689999544554
No 14
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.59 E-value=0.0017 Score=46.26 Aligned_cols=54 Identities=19% Similarity=0.248 Sum_probs=34.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccchh
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHLF 101 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~~~ 101 (202)
.|.||+|+. --....|..|+...+ . .+...|++|.... ..+|..|+...|....
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~ 93 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKIHT-G-IKPYECNICAKRFMWRDSFHRHVTSCTKSYE 93 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTTTC-C-CCCEECSSSCCEESCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHcC-C-CCCeeCCCCcchhcCHHHHHHHHHHcccccc
Confidence 477888877 444566777765432 2 3456788877654 4577777777666543
No 15
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.53 E-value=0.0019 Score=44.70 Aligned_cols=50 Identities=18% Similarity=0.394 Sum_probs=24.7
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H 97 (202)
.|.|++|+..| ....|..|+...+. .+...|++|.... ..+|..|+...+
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~ 60 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRIHS 60 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred CeECCCCCCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHHHHhC
Confidence 35666666533 34455556543221 2345566665443 345555555443
No 16
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.52 E-value=0.003 Score=42.18 Aligned_cols=53 Identities=25% Similarity=0.531 Sum_probs=40.5
Q ss_pred CCcccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 44 RPDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 44 ~~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
...|.|+.|+..| ....|..|+.. |.. .+...|++|.... ..+|..|+...++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 3479999999955 57789999765 433 4568999998875 5689999977655
No 17
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.49 E-value=0.0027 Score=45.47 Aligned_cols=53 Identities=23% Similarity=0.483 Sum_probs=37.9
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccC-CCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHS-CESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~-~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.||+|+. -.....|..|+...|. ...+...|++|.... ..+|..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 588888888 5567788888776543 345567888887764 4578888876655
No 18
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.45 E-value=0.0012 Score=44.45 Aligned_cols=55 Identities=20% Similarity=0.306 Sum_probs=42.3
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCC-CCCceecCCCcccc--hhhhhhhhhhcccch
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSC-ESKVTVCPICSVKV--ARDMLSHITLQHGHL 100 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~-e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~~ 100 (202)
.|.|++|+.. -....|..|+...+.. ..+...|++|.... ..+|..|+...|...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 6999999994 4677899997654432 35678999998875 568999998888763
No 19
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.45 E-value=0.0015 Score=43.64 Aligned_cols=50 Identities=18% Similarity=0.468 Sum_probs=29.2
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H 97 (202)
.|.|++|+. --....|..|+...+. .+...|++|.... ..+|..|+...+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 467777777 3355666677654322 3456677776553 446666665544
No 20
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.44 E-value=0.003 Score=47.49 Aligned_cols=57 Identities=21% Similarity=0.406 Sum_probs=43.4
Q ss_pred CCCCcccCCCCCCCC-CHHHhhhhcccccCCCCCc-------eecCCCcccc--hhhhhhhhhhccc
Q 028852 42 DVRPDFPCPYCYEDF-DIASLCSHLEDEHSCESKV-------TVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 42 d~~~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~-------vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
+....|+|+.|+..| +...|..|+...|..+... ..|++|.... ..+|..|+...++
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 345689999999944 6788999998888875432 5799998765 5578899887654
No 21
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.44 E-value=0.002 Score=43.90 Aligned_cols=51 Identities=24% Similarity=0.466 Sum_probs=30.4
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.||+|+. --....|..|+.. |.. .+...|++|.... ..+|..|+...+|
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~~ 87 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHTKIHLR 87 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHGGGGC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence 477777777 4445667777653 322 3446677776654 4467777765544
No 22
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=96.42 E-value=0.002 Score=47.24 Aligned_cols=50 Identities=28% Similarity=0.628 Sum_probs=40.4
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|++|+.. .....|..|+.. | .++..|++|.... ..+|..|+...||-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 5999999994 456779999765 5 4567999998875 56899999988875
No 23
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.39 E-value=0.0039 Score=43.92 Aligned_cols=52 Identities=19% Similarity=0.442 Sum_probs=36.6
Q ss_pred CcccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 45 ~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
..|.|++|+..| ....|..|+...+. .+...|++|.... ..+|..|+...++
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 468888888844 56778888765432 3557888887764 4578888876655
No 24
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.35 E-value=0.004 Score=42.96 Aligned_cols=53 Identities=26% Similarity=0.505 Sum_probs=41.5
Q ss_pred CcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.||+|+. -.....|..|+.. |. ..+...|++|.... ..+|..|+...|+-
T Consensus 35 ~~~~C~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 35 KPYKCKTCDYAAADSSSLNKHLRI-HS-DERPFKCQICPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp CSEECSSSCCEESSHHHHHHHHHH-SC-CCCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred CCEeCCCCCCccCCHHHHHHHHHH-hC-CCCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence 3699999999 5567889999876 43 24568999998875 56899999887764
No 25
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.23 E-value=0.0053 Score=42.38 Aligned_cols=54 Identities=22% Similarity=0.402 Sum_probs=40.9
Q ss_pred CcccCCCCCCCC-CHHHhhhhcccccCCCCCc-------eecCCCcccc--hhhhhhhhhhccc
Q 028852 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKV-------TVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 45 ~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~-------vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
..|+|+.|+..| ....|..|+...|..+... ..|++|.... ..+|..|+...++
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 468899999954 6788999988767765321 6899998875 5689999876554
No 26
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.22 E-value=0.0043 Score=44.63 Aligned_cols=53 Identities=26% Similarity=0.451 Sum_probs=41.8
Q ss_pred CcccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.||+|++.| ....|..|+...| ..++-.|++|.... ..+|..|+...|..
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLH--AAQVFPCKYCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTS--CSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhcc--CCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence 469999999955 5688999977643 34678999998875 66899999877753
No 27
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.20 E-value=0.0031 Score=45.22 Aligned_cols=53 Identities=25% Similarity=0.386 Sum_probs=41.7
Q ss_pred CcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.||+|+. --....|..|+... .. .+...|++|.... ..+|..|+...|+.
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~h-~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVSH-TG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHH-SS-SCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred CCeECCCCCCccCCHHHHHHHHHHc-CC-CCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence 4699999999 55678899998654 32 4668999998875 56899999877764
No 28
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.17 E-value=0.0013 Score=45.68 Aligned_cols=52 Identities=19% Similarity=0.350 Sum_probs=42.0
Q ss_pred CcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc-hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v-s~d~i~Hl~~~H~~ 99 (202)
..|.|+||+..|....|-.|. .|+. .+++.||.|...+ ..+|..|+....+.
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~c~~~ 68 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEVCGRE 68 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHHBTTB
T ss_pred cccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHHccCC
Confidence 369999999999999999996 5654 6779999998865 56888898764443
No 29
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.11 E-value=0.0029 Score=42.19 Aligned_cols=50 Identities=24% Similarity=0.481 Sum_probs=39.3
Q ss_pred ccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 47 F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
|.|+.|+. --+...|..|+...+ +.+...|++|.... ..++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 88999999 556788999987643 34668999998875 5689999877665
No 30
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=96.10 E-value=0.004 Score=42.01 Aligned_cols=51 Identities=22% Similarity=0.545 Sum_probs=39.8
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
-|.|+.|+..| ....|..|.. .|.. .++-.|++|.... ..+|..|+.+..|
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~-~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~Htg 57 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRR-AHLG-YRPRSCPECGKCFRDQSEVNRHLKVHQN 57 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHH-HHHT-CCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred CccCCCCCCEeCCHHHHHHHHH-HhCC-CcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence 49999999955 5678999965 4654 5678999998875 6789999876443
No 31
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.02 E-value=0.0066 Score=42.72 Aligned_cols=53 Identities=23% Similarity=0.305 Sum_probs=40.6
Q ss_pred CcccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.|++|+.. .....|..|+... .. .+...|++|.... ..+|..|+...++.
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~h-~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYIH-SK-EKPFKCQECGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGGS-CC-CCTTSCSSSCCCCSSHHHHHHHHHHTTSC
T ss_pred CCcCCCCccchhCCHHHHHHHHHHh-CC-CCCeECCCcCCcccCHHHHHHHHHHhCCC
Confidence 35999999994 4778899997654 32 4567999998875 56899999877654
No 32
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.94 E-value=0.0045 Score=42.64 Aligned_cols=53 Identities=28% Similarity=0.565 Sum_probs=41.6
Q ss_pred CcccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 45 PDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 45 ~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
..|.|++|+..| ....|..|+.. |.. .+...|++|.... ..+|..|+...|+.
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 6 SGVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp SCEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred CCeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence 369999999944 67889999875 433 4568999998875 56899999887764
No 33
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.92 E-value=0.0039 Score=42.94 Aligned_cols=54 Identities=28% Similarity=0.546 Sum_probs=42.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccchh
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHLF 101 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~~~ 101 (202)
.|.|++|+..| ....|..|+.. |.. .+...|++|.... ..+|..|+...|+..|
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~ 59 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPI 59 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcc
Confidence 58999999944 67889999775 543 4568999998765 5689999999997544
No 34
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.60 E-value=0.0077 Score=43.09 Aligned_cols=52 Identities=15% Similarity=0.229 Sum_probs=25.7
Q ss_pred cccCCCCCC-CCCHHHhhhhcccc-cCCCCCceecCCCcccc----hhhhhhhhhhcc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDE-HSCESKVTVCPICSVKV----ARDMLSHITLQH 97 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~e-H~~e~~~vVCPVCa~~v----s~d~i~Hl~~~H 97 (202)
.|.|+.|+. -.....|..|+... |..+.....|++|.... ..+|..|+...+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 366666666 33455666665530 22222233466665432 335556655433
No 35
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.56 E-value=0.0075 Score=42.85 Aligned_cols=45 Identities=22% Similarity=0.479 Sum_probs=33.0
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhh
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHIT 94 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~ 94 (202)
.|.|++|+..| ....|..|+.. | .+...|++|.... ..+|..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 58899998844 56778888765 4 2567889887765 557888884
No 36
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=95.29 E-value=0.018 Score=41.45 Aligned_cols=50 Identities=26% Similarity=0.560 Sum_probs=33.8
Q ss_pred cccCC--CCCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCP--YCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CP--fC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|| .|+.. -+...|..|+. .| ..+...|++|.... ..++..|+...++
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~-~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLH-TH--GPRVHVCAECGKAFVESSKLKRHQLVHTG 59 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHG-GG--SCCCEECTTTCCEESSHHHHHHHGGGTSC
T ss_pred cccCCCCCCcCccCCHHHHHHHHH-Hc--CCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence 57788 78884 45667888865 45 45667788887654 4567777766554
No 37
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.21 E-value=0.014 Score=35.11 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=27.2
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|....|..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 5999999994 45678889977467543 56889998
No 38
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.18 E-value=0.0095 Score=44.46 Aligned_cols=51 Identities=27% Similarity=0.509 Sum_probs=37.2
Q ss_pred cccCCC--CCC-CCCHHHhhhhcccccCCCCCceecCC--Ccccc--hhhhhhhhhhccc
Q 028852 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~v--s~d~i~Hl~~~H~ 98 (202)
.|.||+ |+. -.....|..|+.. |.. .+...|++ |.... ..+|..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 599987 999 4567788999765 432 45678998 98764 5578889855554
No 39
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.12 E-value=0.0014 Score=45.30 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=42.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccch
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGHL 100 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~~ 100 (202)
.|.|++|+. --....|..|....|. ...+|++|.... ..+|..||...|+..
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~~ 85 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKLV 85 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 599999999 4467899999988873 678999998765 557999998888753
No 40
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=95.07 E-value=0.02 Score=34.45 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=26.3
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 5999999994 456788899765 644 467889998
No 41
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=95.06 E-value=0.016 Score=40.01 Aligned_cols=55 Identities=24% Similarity=0.420 Sum_probs=38.5
Q ss_pred CCCcccCCC--CCC-CCCHHHhhhhcccccCCCCCceecC--CCcccc--hhhhhhhhhhcccc
Q 028852 43 VRPDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 43 ~~~~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCP--VCa~~v--s~d~i~Hl~~~H~~ 99 (202)
....|.|++ |+. --....|..|+.. |.. .+...|| +|.... ..+|..|+...++.
T Consensus 12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 73 (100)
T 2ebt_A 12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73 (100)
T ss_dssp SCCCEECCSSSCCCEESCHHHHHHHHHH-HSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSC
T ss_pred cCcceEcCCCCCCCcccCHHHHHHHHHH-hCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 345788997 998 4467888889775 432 3567887 587764 55788888766553
No 42
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.05 E-value=0.016 Score=38.58 Aligned_cols=52 Identities=23% Similarity=0.486 Sum_probs=40.4
Q ss_pred cccCCC--CCC-CCCHHHhhhhcccccCCCCCceecCC--Ccccc--hhhhhhhhhhccc
Q 028852 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|++ |+. --....|..|+...|.. .+...|++ |.... ..+|..|+...++
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 588887 999 44678899998766765 46789999 98765 5689999986654
No 43
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.04 E-value=0.022 Score=34.31 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=26.1
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRG-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGG-GTSC-CCCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhh-hcCC-CCCCCCCCC
Confidence 5999999994 45677889965 4554 367899998
No 44
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.00 E-value=0.015 Score=35.10 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |..+ ++-.|+||
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999999 4456778899654 6543 67889998
No 45
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.94 E-value=0.02 Score=34.36 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=26.3
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 456788899765 544 457889998
No 46
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.92 E-value=0.015 Score=43.04 Aligned_cols=51 Identities=22% Similarity=0.508 Sum_probs=39.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccC--CCCCceecCCCcccc--hhhhhhh-hhhc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHS--CESKVTVCPICSVKV--ARDMLSH-ITLQ 96 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~--~e~~~vVCPVCa~~v--s~d~i~H-l~~~ 96 (202)
.|.|++|+..| ....|..|+...|. ...++..|++|.... ..+|..| +...
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H 74 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH 74 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc
Confidence 59999999954 57789999876775 345678999998865 5688999 4443
No 47
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=94.87 E-value=0.015 Score=38.29 Aligned_cols=49 Identities=24% Similarity=0.476 Sum_probs=36.6
Q ss_pred CcccCCC--CCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhh
Q 028852 45 PDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (202)
Q Consensus 45 ~~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~ 95 (202)
..|.||+ |+. --....|..|+.. |.. .+...|++|.... ..+|..|+..
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHHh
Confidence 3699996 999 4567789999764 443 4568999998875 5678888754
No 48
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=94.86 E-value=0.014 Score=45.28 Aligned_cols=51 Identities=24% Similarity=0.496 Sum_probs=35.5
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.||+|+. --....|..|+...+. .+...|++|.... ..+|..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 588888888 4456678888765432 3557788887764 4578888876655
No 49
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=94.80 E-value=0.016 Score=34.90 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=26.2
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGC-CCCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999994 466788899665 544 367889998
No 50
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=94.75 E-value=0.017 Score=39.16 Aligned_cols=52 Identities=25% Similarity=0.525 Sum_probs=39.2
Q ss_pred cccCCC--CCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPY--CYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPf--C~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.||+ |+.. -....|..|+...+. .+...|++|.... ..+|..|+...++.
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 60 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTGE 60 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence 599995 9994 467789999875432 4568999998875 56889999866553
No 51
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.71 E-value=0.015 Score=41.22 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=39.6
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|++|+.. -....|..|+. |.. .+...|++|.... ..+|..|+...|..
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHcCC
Confidence 5999999994 45778899983 654 4678999998775 56899999766653
No 52
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=94.59 E-value=0.016 Score=44.22 Aligned_cols=48 Identities=25% Similarity=0.322 Sum_probs=28.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhh
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~ 95 (202)
.|.|+.|+. --....|..|+. .|.. .++-.|++|.... ..+|..|+..
T Consensus 22 ~y~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 22 YYICIVCKRSYVCLTSLRRHFN-IHSW-EKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEETTTCCEESCHHHHHHHHH-HHHC-CSCEECSSSSCEESSHHHHHHHHHH
T ss_pred CeECCCCCCCcCCHHHHHHHHH-HcCC-CCCeeCCccCeecccccchhhhccc
Confidence 477777777 345566777754 3533 3456677776553 4466666654
No 53
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.57 E-value=0.021 Score=34.41 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=26.2
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCC-CCCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCC-CCCCCCCCC
Confidence 5999999994 456788899765 544 467889998
No 54
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.49 E-value=0.025 Score=34.06 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=26.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMV-HTA-EKPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-TTC-CCSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999954 56788899654 544 366789998
No 55
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.42 E-value=0.034 Score=33.32 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=26.0
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999994 456778899654 544 457889998
No 56
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.41 E-value=0.031 Score=33.70 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4456788999765 544 466889998
No 57
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=94.40 E-value=0.027 Score=33.78 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=26.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4456788899754 543 457899998
No 58
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=94.37 E-value=0.028 Score=33.68 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=26.2
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456888899654 554 456889998
No 59
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.36 E-value=0.024 Score=34.09 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQ-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-TTSS-CCSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 599999999 456678889976 4544 367889998
No 60
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.33 E-value=0.022 Score=35.93 Aligned_cols=39 Identities=18% Similarity=0.432 Sum_probs=30.6
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.|.|++|+..| ....|..|+...|.. .+...|++|....
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F 51 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGP 51 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSS
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCC
Confidence 69999999944 678899998766765 4568999997643
No 61
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=94.27 E-value=0.025 Score=37.58 Aligned_cols=50 Identities=22% Similarity=0.453 Sum_probs=26.5
Q ss_pred ccC--CCCCCCC-CHHHhhhhcccccCCCCCceecCC--Ccccc--hhhhhhhhhhccc
Q 028852 47 FPC--PYCYEDF-DIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 47 F~C--PfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~v--s~d~i~Hl~~~H~ 98 (202)
|.| +.|+..| ....|..|... |.. .+...||+ |.... ..+|..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 556 5566633 45556666533 322 24456666 65543 3456666665555
No 62
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.26 E-value=0.026 Score=33.83 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=26.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+..| ....|..|.. .|.. .+...|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQK-CHTG-ERHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHH-HHSC-CSSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999944 5678899965 5654 367889998
No 63
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.24 E-value=0.019 Score=34.57 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=26.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4456788899665 544 466889998
No 64
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.24 E-value=0.019 Score=34.57 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=26.1
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|.. .|.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHH-HHSS-SSCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHH-HHCC-CCCCCCCCC
Confidence 5999999994 45678889976 4543 467899998
No 65
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.23 E-value=0.041 Score=39.51 Aligned_cols=52 Identities=19% Similarity=0.385 Sum_probs=39.5
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC--Ccccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|++|+. --....|..|+.. |.. .+...|++ |.... ..++..|+...++.
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 90 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCC
Confidence 699999999 4567889999775 432 45678987 98765 56889999876653
No 66
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.22 E-value=0.027 Score=33.97 Aligned_cols=34 Identities=18% Similarity=0.062 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4567889999754 643 456789998
No 67
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=94.18 E-value=0.027 Score=33.95 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=25.9
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4456778889754 544 467889998
No 68
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=94.16 E-value=0.039 Score=42.80 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=23.6
Q ss_pred ccCC--CCCC-CCCHHHhhhhcccccCCCCCceec--CCCcccc--hhhhhhhhhhcc
Q 028852 47 FPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVC--PICSVKV--ARDMLSHITLQH 97 (202)
Q Consensus 47 F~CP--fC~e-~~dv~~L~~H~~~eH~~e~~~vVC--PVCa~~v--s~d~i~Hl~~~H 97 (202)
|.|+ .|+. -.....|..|+...|....+...| ++|.... ..+|..|+...+
T Consensus 73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 130 (190)
T 1tf6_A 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130 (190)
T ss_dssp EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS
T ss_pred eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC
Confidence 5555 4555 334445555554444444444455 4454432 334555554433
No 69
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.10 E-value=0.034 Score=33.51 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=26.1
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~-~~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HT-GEKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TS-CSSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 5999999994 456788899764 54 3467889998
No 70
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.05 E-value=0.028 Score=33.74 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|+.|+. --....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQR-IHTG-VKPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHG-GGSC-CCSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 599999999 556678889975 4554 367899998
No 71
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.03 E-value=0.032 Score=33.45 Aligned_cols=34 Identities=21% Similarity=0.157 Sum_probs=25.9
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999994 456788899754 543 467889998
No 72
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=94.00 E-value=0.027 Score=43.75 Aligned_cols=52 Identities=23% Similarity=0.443 Sum_probs=40.4
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.||+|+. --+...|..|+...+. .+...|++|.... ..+|..|+...++.
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 131 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTGE 131 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHHHHHHCC
T ss_pred CccCcccCCccCCHHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhCCC
Confidence 599999999 4577889999876543 4567999998875 55789999876653
No 73
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.99 E-value=0.036 Score=33.22 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=26.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|+. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHG-GGCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 599999999 446678999975 4543 456889998
No 74
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.95 E-value=0.052 Score=32.65 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=26.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|+.|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQR-VHMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGG-GGGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 59999999954 5678889966 4543 456889998
No 75
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.94 E-value=0.037 Score=39.12 Aligned_cols=51 Identities=18% Similarity=0.405 Sum_probs=39.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.| .|+. --....|..|+...+. .+...|++|.... ..+|..|+...++.
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCCC
T ss_pred CEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCCC
Confidence 6999 9999 5567889999875433 4568999998875 56899999876653
No 76
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.93 E-value=0.029 Score=33.77 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=26.3
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. -.....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4566889999654 544 467889998
No 77
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.92 E-value=0.047 Score=32.78 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=26.0
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+..| ....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHT-TTTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999954 5678889976 4543 467889998
No 78
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.92 E-value=0.035 Score=33.36 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=25.9
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|+. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQR-VHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGG-GGSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 5999999994 45678889965 4544 466889998
No 79
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=93.90 E-value=0.027 Score=33.96 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=26.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999999954 56788889764 543 467899998
No 80
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.88 E-value=0.03 Score=33.70 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=26.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4456788899754 543 467889998
No 81
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.87 E-value=0.025 Score=33.91 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=25.9
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456788899754 544 456789998
No 82
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.82 E-value=0.025 Score=34.21 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=25.9
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTG-QRPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHS-CCCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999994 456778899765 544 367899998
No 83
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.81 E-value=0.046 Score=40.66 Aligned_cols=53 Identities=23% Similarity=0.308 Sum_probs=33.0
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCC-CCCceecCCCc-----ccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSC-ESKVTVCPICS-----VKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~-e~~~vVCPVCa-----~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|+.|+.. -+...|..|+...|.. +.+..+|++|. ... ..+|..|+...++
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence 5778888884 4577788887765432 34556677643 221 4467777766554
No 84
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.78 E-value=0.022 Score=34.34 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=25.9
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHH-HHHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 599999999 445678888965 4543 467889998
No 85
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.74 E-value=0.043 Score=32.93 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=26.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|+.|+. --....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4556789999654 543 466889998
No 86
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=93.63 E-value=0.052 Score=36.55 Aligned_cols=51 Identities=25% Similarity=0.537 Sum_probs=26.3
Q ss_pred cccCCC--CCCCC-CHHHhhhhcccccCCCCCceecC--CCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPY--CYEDF-DIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPf--C~e~~-dv~~L~~H~~~eH~~e~~~vVCP--VCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|++ |+..| ....|..|+.. |.. .+...|| +|.... ..+|..|+...++
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 62 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRT-HTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTG 62 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTT-SCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHC
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHh-cCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCC
Confidence 566666 66633 45556666553 221 2345665 365543 3456666654433
No 87
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.61 E-value=0.045 Score=32.84 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=25.7
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 599999999 4456778889764 543 456789998
No 88
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=93.57 E-value=0.041 Score=36.54 Aligned_cols=47 Identities=23% Similarity=0.290 Sum_probs=37.3
Q ss_pred cccCCC--CCC-CCCHHHhhhhcccccCCCCCceecCC---Ccccc--hhhhhhhhhhcc
Q 028852 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI---CSVKV--ARDMLSHITLQH 97 (202)
Q Consensus 46 ~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCPV---Ca~~v--s~d~i~Hl~~~H 97 (202)
.|.||+ |+. -.....|..|+...+. ..|++ |.... ..+|..|+...|
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 599999 999 5577889999866544 78999 97764 568999987765
No 89
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.52 E-value=0.029 Score=33.81 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=26.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4566788899765 543 356789998
No 90
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.46 E-value=0.022 Score=34.29 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=26.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSS-CCCSSSCCC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4456788899765 544 367889998
No 91
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.36 E-value=0.046 Score=32.79 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=26.2
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|.. .|.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQR-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence 599999999 556688899965 4544 467889998
No 92
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.35 E-value=0.038 Score=33.21 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=25.8
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|+.|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSC-CCCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4556778899754 544 467889998
No 93
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.34 E-value=0.028 Score=33.87 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=25.8
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 599999999 4456778899665 543 456789998
No 94
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.31 E-value=0.039 Score=33.15 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=25.8
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4456778889654 543 467899998
No 95
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.26 E-value=0.043 Score=33.53 Aligned_cols=36 Identities=25% Similarity=0.231 Sum_probs=27.8
Q ss_pred CcccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCCc
Q 028852 45 PDFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICS 82 (202)
Q Consensus 45 ~~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa 82 (202)
..|.|++|+.. -....|..|... |.. .++-.|++|.
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~ 47 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSS 47 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCC
Confidence 46999999994 467889999654 543 4678999996
No 96
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=93.25 E-value=0.083 Score=35.51 Aligned_cols=49 Identities=16% Similarity=0.379 Sum_probs=36.5
Q ss_pred CcccCCC--CCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhh
Q 028852 45 PDFPCPY--CYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITL 95 (202)
Q Consensus 45 ~~F~CPf--C~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~ 95 (202)
..|.||+ |+.. -....|..|+.. |.. .+...|++|.... ..+|..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRK-HTG-HRPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCcccCCHHHHHHHHHh
Confidence 3699986 9994 467889999754 543 3568999998764 5578888754
No 97
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.22 E-value=0.035 Score=33.36 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=26.0
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. -....|..|... |.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 5999999994 456788899665 543 456889998
No 98
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=93.13 E-value=0.058 Score=32.45 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=26.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4556788899654 544 456789998
No 99
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.11 E-value=0.041 Score=32.93 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=25.9
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|++ --....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4556788899654 543 457889998
No 100
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.10 E-value=0.059 Score=32.21 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=25.8
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+..| ....|..|.. .|.. .++..|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQR-VHMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHT-TTCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence 59999999944 5678889965 4544 456889988
No 101
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.08 E-value=0.028 Score=40.06 Aligned_cols=55 Identities=15% Similarity=0.095 Sum_probs=41.7
Q ss_pred CCCcccCCCCCCCC---CHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 43 VRPDFPCPYCYEDF---DIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 43 ~~~~F~CPfC~e~~---dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.+..|.|++|+..| ....|..|+.. |.. .++..|++|.... ..+|..|+...|..
T Consensus 47 ~~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 47 DDNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp CSCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred cCCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence 34567799999976 67789999755 543 4667999998775 56899999877755
No 102
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.87 E-value=0.062 Score=32.19 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=25.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQK-IHTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHT-TTTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence 599999999 455677889975 4543 366789987
No 103
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=92.80 E-value=0.042 Score=41.85 Aligned_cols=52 Identities=25% Similarity=0.396 Sum_probs=41.7
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|++|+.. .....|..|.. .|.. .++..|++|.... ..+|..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEI-HHTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHH-HHHT-CCCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhcc-ccCC-CccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 5999999994 45778999965 4654 4578999998875 66899999999874
No 104
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.74 E-value=0.045 Score=32.81 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=26.8
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCCc
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPICS 82 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVCa 82 (202)
.|.|+.|+.. .....|..|... |.. .+...||+|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCCC
Confidence 5999999995 467788899765 543 4577999993
No 105
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.71 E-value=0.045 Score=32.87 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=25.7
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999999 4556788889754 543 467889998
No 106
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.70 E-value=0.043 Score=33.03 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=25.9
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|+.|+. --....|..|... |.. .+.-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 599999999 4456788899764 543 456789998
No 107
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.40 E-value=0.066 Score=32.07 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=25.7
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999944 56778899654 543 456889998
No 108
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=92.40 E-value=0.042 Score=33.00 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=25.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|.. .|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRR-VHTG-GKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTH-HHHS-CCCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence 599999999 445677888965 4544 366789998
No 109
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.39 E-value=0.057 Score=32.07 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=25.8
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+. --....|..|... |.. .+.-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999999 4456788899765 543 456889988
No 110
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=92.29 E-value=0.13 Score=39.74 Aligned_cols=51 Identities=20% Similarity=0.331 Sum_probs=39.7
Q ss_pred cccC--CCCCC-CCCHHHhhhhcccccCCCCCceecCC--Ccccc--hhhhhhhhhhccc
Q 028852 46 DFPC--PYCYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~C--PfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~v--s~d~i~Hl~~~H~ 98 (202)
.|.| +.|+. --....|..|+.. |.. .+...||+ |.... ..+|..|+...+|
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 5999 77999 5567889999775 433 45678988 98775 5689999998777
No 111
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=92.29 E-value=0.16 Score=34.85 Aligned_cols=51 Identities=18% Similarity=0.406 Sum_probs=38.3
Q ss_pred CcccCCC--CCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhcc
Q 028852 45 PDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQH 97 (202)
Q Consensus 45 ~~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H 97 (202)
..|.||+ |+. --....|..|+.. |.. .+...|++|.... ..+|..|+...+
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 99 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRK-HTG-AKPFQCGVCNRSFSRSDHLALHMKRHQ 99 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHH-HTS-CCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHH-hCC-CCCeECCCCcCccCCHHHHHHHHHHhC
Confidence 3599986 999 5567889999865 433 3568999998865 568899987654
No 112
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=92.21 E-value=0.08 Score=37.44 Aligned_cols=51 Identities=20% Similarity=0.338 Sum_probs=28.7
Q ss_pred cccCC--CCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CP--fC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|| .|+. --....|..|+...+ ..+...|++|.... ..+|..|+...++
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHT--GVKPFQCKTCQRKFSRSDHLKTHTRTHTG 91 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcC--CCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence 46676 3766 334566666655432 23445677776553 4466666665444
No 113
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=92.16 E-value=0.12 Score=38.49 Aligned_cols=52 Identities=21% Similarity=0.349 Sum_probs=39.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC--Ccccc--hhhhhhhhhhcccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHITLQHGH 99 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~v--s~d~i~Hl~~~H~~ 99 (202)
.|.|++|+..| ....|..|+...+ ..+...|++ |.... ..+|..|+...++.
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRVHT--GEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHHHH--CCCSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred ccCCCCcccccCCHHHHHHHHHhcC--CCCcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 38999999944 6778999987543 245688998 98765 56889999877663
No 114
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.99 E-value=0.075 Score=31.93 Aligned_cols=34 Identities=26% Similarity=0.279 Sum_probs=25.3
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|++|+.. .....|..|... |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999994 456778889654 543 466789987
No 115
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=91.66 E-value=0.27 Score=32.02 Aligned_cols=49 Identities=20% Similarity=0.396 Sum_probs=36.2
Q ss_pred CCcccCCC--CCC-CCCHHHhhhhcccccCCCCCceecCC--Ccccc--hhhhhhhhh
Q 028852 44 RPDFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPI--CSVKV--ARDMLSHIT 94 (202)
Q Consensus 44 ~~~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~v--s~d~i~Hl~ 94 (202)
...|.|++ |+. --....|..|+.. |.. .+...|++ |.... ..+|..|+.
T Consensus 15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 15 IRSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred cCceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHhh
Confidence 45799999 999 4467889999764 543 46689976 98875 457788874
No 116
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=91.63 E-value=0.12 Score=36.47 Aligned_cols=51 Identities=25% Similarity=0.542 Sum_probs=39.3
Q ss_pred cccCCC--CCC-CCCHHHhhhhcccccCCCCCceecC--CCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCP--ICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCP--VCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|++ |+. -.....|..|+.. |.. .+...|+ +|.... ..+|..|+...++
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRK-HTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHh-hCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 699998 999 5568899999875 432 4568999 798764 5689999987654
No 117
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=91.48 E-value=0.08 Score=38.86 Aligned_cols=47 Identities=32% Similarity=0.762 Sum_probs=32.3
Q ss_pred cccCCCcCCCCCCC-CCcccCCCCCC--CCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 30 DRLSIDDFEVEDDV-RPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 30 ~~~~~~~~~~~dd~-~~~F~CPfC~e--~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
+.+.++|++-+++. .-.|+|| ||. -+....|... .-.+.||-|+-.+
T Consensus 13 dev~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I 62 (83)
T 1wge_A 13 DEVEIEDFQYDEDSETYFYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLII 62 (83)
T ss_dssp CEEEGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEE
T ss_pred EEEEHHHceEccCCCEEEEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEE
Confidence 34556777765443 4579999 988 6666677532 2368899999876
No 118
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.29 E-value=0.072 Score=35.74 Aligned_cols=47 Identities=19% Similarity=0.545 Sum_probs=28.2
Q ss_pred CCCCCcccCCCCCCCCCHH-H-hhhhc-----ccccCC-CCCceecCCCcccchh
Q 028852 41 DDVRPDFPCPYCYEDFDIA-S-LCSHL-----EDEHSC-ESKVTVCPICSVKVAR 87 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~-~-L~~H~-----~~eH~~-e~~~vVCPVCa~~vs~ 87 (202)
+++...+.||.|.+.+... . -|.|. -..+.. ......||+|...+..
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 4566789999998855432 1 23342 222221 1356789999887643
No 119
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=91.24 E-value=0.069 Score=39.75 Aligned_cols=48 Identities=31% Similarity=0.743 Sum_probs=32.9
Q ss_pred cccCCCcCCCCCC-CCCcccCCCCCC--CCCHHHhhhhcccccCCCCCceecCCCcccch
Q 028852 30 DRLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 30 ~~~~~~~~~~~dd-~~~~F~CPfC~e--~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs 86 (202)
+.+.++|++-+++ ..-.|+|| ||. .++...|... .-.+.||-|+-.+.
T Consensus 6 deV~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 6 DEVEIEDFQYDEDSETYFYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIK 56 (89)
T ss_dssp CEEETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEE
T ss_pred eEEEHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 3455677665443 34689999 998 6666777542 23688999998763
No 120
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=91.14 E-value=0.082 Score=34.42 Aligned_cols=36 Identities=22% Similarity=0.471 Sum_probs=26.1
Q ss_pred cccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.|.||.|+..|....-.. ..|.. .++..|++|....
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f 49 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEV 49 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBC
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCcc
Confidence 599999999777654333 45644 4678999998753
No 121
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=90.94 E-value=0.14 Score=34.96 Aligned_cols=47 Identities=15% Similarity=0.256 Sum_probs=28.0
Q ss_pred CCCCCCcccCCCCCCCCCHHH--hhhhcccccCC----CCCceecCCCcccch
Q 028852 40 EDDVRPDFPCPYCYEDFDIAS--LCSHLEDEHSC----ESKVTVCPICSVKVA 86 (202)
Q Consensus 40 ~dd~~~~F~CPfC~e~~dv~~--L~~H~~~eH~~----e~~~vVCPVCa~~vs 86 (202)
++++...|.||.|.+-|.... -|.|.-...+. ......||+|...+.
T Consensus 2 ~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 2 SPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp CCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred CcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 446777999999988554321 23332221111 233678999988763
No 122
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.65 E-value=0.01 Score=38.51 Aligned_cols=45 Identities=20% Similarity=0.253 Sum_probs=30.3
Q ss_pred cccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc--hhhhhhhhhhccc
Q 028852 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV--ARDMLSHITLQHG 98 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~ 98 (202)
.|.|+.|+..|.....+.- .+...|++|.... ..+|..|+...++
T Consensus 18 ~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~ 64 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESG 64 (73)
T ss_dssp EEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred CeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence 5999999986544332221 4667899997764 4577888776554
No 123
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=90.65 E-value=0.091 Score=38.69 Aligned_cols=37 Identities=19% Similarity=0.657 Sum_probs=24.1
Q ss_pred CCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 43 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
+...|.||||+-.=.+ .|.-+.......+.|-||...
T Consensus 20 L~t~F~CPfCnh~~sV-----~vkidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 20 LETQFTCPFCNHEKSC-----DVKMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp CSSCCCCTTTCCSSCE-----EEEEETTTTEEEEEESSSCCE
T ss_pred CCCeEcCCCCCCCCeE-----EEEEEccCCEEEEEcccCCCe
Confidence 4569999999873221 233333344567889999875
No 124
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.26 E-value=0.24 Score=29.37 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=23.6
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |..+ ++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 59999999954 56778889764 5443 5667775
No 125
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=90.21 E-value=0.32 Score=35.60 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=25.4
Q ss_pred CCCCCcccCCCCCC-------------CCCHHHhhhhcccccCCCCCceecCCCcccch
Q 028852 41 DDVRPDFPCPYCYE-------------DFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 41 dd~~~~F~CPfC~e-------------~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs 86 (202)
.+++..|.||.|.+ .|+...+..|+.. ...||+|-..+.
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l~ 68 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPLT 68 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBCC
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCCC
Confidence 35678999999855 2444444444432 458999988753
No 126
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.55 E-value=0.34 Score=28.78 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=23.3
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG-GCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 59999999944 56778889654 5443 5567775
No 127
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=89.24 E-value=0.11 Score=38.19 Aligned_cols=47 Identities=32% Similarity=0.779 Sum_probs=31.7
Q ss_pred cccCCCcCCCCCC-CCCcccCCCCCC--CCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 30 DRLSIDDFEVEDD-VRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 30 ~~~~~~~~~~~dd-~~~~F~CPfC~e--~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
+.+.++|++-+++ ..-.|+|| ||. .++...|... --.+.||-|+-.+
T Consensus 6 dev~leDm~~de~~~~y~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I 55 (83)
T 1yop_A 6 DEIEIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMI 55 (83)
T ss_dssp BCCBGGGSEEETTTTEEEEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEE
T ss_pred eEEEHHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEE
Confidence 3445666665443 34689999 998 6666677432 2468899999876
No 128
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.92 E-value=0.36 Score=28.68 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=23.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTG-ERPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSC-CCCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 59999999944 56778889654 543 35667775
No 129
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.81 E-value=0.19 Score=29.96 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=22.9
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+. --....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 589999999 4456778888754 543 35667775
No 130
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.74 E-value=0.36 Score=28.84 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=23.1
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|+.|+.. -....|..|+.. |.. .+.-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSG-ERPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTS-CCSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCC-CCCCCCCC
Confidence 5999999994 455678889654 544 35667775
No 131
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=88.73 E-value=0.47 Score=34.84 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=25.5
Q ss_pred CCCCCcccCCCCCC------------CCCHHHhhhhcccccCCCCCceecCCCcccch
Q 028852 41 DDVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 41 dd~~~~F~CPfC~e------------~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs 86 (202)
.+++..|.||.|.+ .|+...+..|+.. ...||+|-..+.
T Consensus 24 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~ 74 (100)
T 2kre_A 24 SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTLT 74 (100)
T ss_dssp SSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBCC
T ss_pred ccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCCC
Confidence 35678999999865 2344444444432 468999988753
No 132
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.29 E-value=0.42 Score=28.42 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=22.6
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|+.|+..| ....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 58999999944 55778888654 5433 5567764
No 133
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=88.27 E-value=0.35 Score=34.29 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=25.9
Q ss_pred CCCCCcccCCCCCC------------CCCHHHhhhhcccccCCCCCceecCCCcccch
Q 028852 41 DDVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 41 dd~~~~F~CPfC~e------------~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs 86 (202)
.+++..|.||.|.+ .|+...+..|+.. ...||+|...+.
T Consensus 9 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~ 59 (85)
T 2kr4_A 9 SDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLT 59 (85)
T ss_dssp TTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCC
T ss_pred hcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCC
Confidence 35677999999855 3444455555442 368999988753
No 134
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=88.25 E-value=0.077 Score=37.36 Aligned_cols=46 Identities=20% Similarity=0.447 Sum_probs=28.2
Q ss_pred CCCCCCcccCCCCCCCCCH-HHh--hhh-----cccccCCCCCceecCCCcccc
Q 028852 40 EDDVRPDFPCPYCYEDFDI-ASL--CSH-----LEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 40 ~dd~~~~F~CPfC~e~~dv-~~L--~~H-----~~~eH~~e~~~vVCPVCa~~v 85 (202)
.+++...|.||.|.+.|.. ..| |-| |-..+........||+|...+
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 3466778999999884432 233 445 223332233457899998864
No 135
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=87.89 E-value=0.34 Score=25.64 Aligned_cols=26 Identities=27% Similarity=0.517 Sum_probs=18.9
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~ 71 (202)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 48899999955 457788886556654
No 136
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.86 E-value=0.34 Score=28.79 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=22.6
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |..+ +.-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCSC-CCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCCC-CCCCCCC
Confidence 58999999944 56778888654 5433 4567764
No 137
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.72 E-value=0.18 Score=33.03 Aligned_cols=18 Identities=17% Similarity=0.658 Sum_probs=13.6
Q ss_pred CCCCCCcccCCCCCCCCC
Q 028852 40 EDDVRPDFPCPYCYEDFD 57 (202)
Q Consensus 40 ~dd~~~~F~CPfC~e~~d 57 (202)
.+++...+.||.|.+.+.
T Consensus 14 ~~~~~~~~~C~IC~~~~~ 31 (63)
T 2ysj_A 14 VNKLQEEVICPICLDILQ 31 (63)
T ss_dssp CCCCCCCCBCTTTCSBCS
T ss_pred HHhCccCCCCCcCCchhC
Confidence 345677899999988554
No 138
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.67 E-value=0.45 Score=28.19 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=23.0
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+.. -....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRG-IHTG-EKPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHT-TTTT-SSCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHH-hhCC-CCCCCCCC
Confidence 5999999994 45677888864 4543 35667775
No 139
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.60 E-value=0.43 Score=28.29 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=22.9
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRG-IHTG-EKPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHT-TTSC-SCCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhH-hcCC-CCCCCCCC
Confidence 59999999954 5567888864 4544 35567775
No 140
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.52 E-value=0.46 Score=28.17 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=23.0
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQV-IHTG-EKPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHT-TTCC-SCCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence 59999999954 5577888965 4543 34567764
No 141
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.21 E-value=0.32 Score=30.89 Aligned_cols=18 Identities=17% Similarity=0.558 Sum_probs=13.1
Q ss_pred CCCCCcccCCCCCCCCCH
Q 028852 41 DDVRPDFPCPYCYEDFDI 58 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv 58 (202)
+++...+.||.|.+.+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~ 27 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKE 27 (58)
T ss_dssp SCSCCCCBCSSSCCBCSS
T ss_pred hccccCCCCccCCcccCc
Confidence 355668999999885543
No 142
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.02 E-value=0.44 Score=28.15 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=23.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+. --....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRR-IHTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGG-GTSS-CCSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHH-hcCC-CCCcCCCC
Confidence 599999999 445677888865 4544 35567765
No 143
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.67 E-value=0.31 Score=28.89 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=22.2
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+. --....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSG-EKPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCC-CSCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 588999988 4456778888654 543 35567765
No 144
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=86.51 E-value=0.3 Score=33.04 Aligned_cols=47 Identities=26% Similarity=0.611 Sum_probs=27.7
Q ss_pred CCCCCcccCCCCCCCCCHHH-h-hhh-----cccccCCC-----CCceecCCCcccchh
Q 028852 41 DDVRPDFPCPYCYEDFDIAS-L-CSH-----LEDEHSCE-----SKVTVCPICSVKVAR 87 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~~-L-~~H-----~~~eH~~e-----~~~vVCPVCa~~vs~ 87 (202)
+++...+.||.|.+.|.... | |.| |-..+... .....||+|...+..
T Consensus 7 ~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 7 GNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 35566899999988544321 2 333 23332222 236789999887643
No 145
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.02 E-value=0.14 Score=35.31 Aligned_cols=48 Identities=21% Similarity=0.415 Sum_probs=27.3
Q ss_pred CCCCCCCcccCCCCCCCCCHHHh--hhhcccccCCC---CCceecCCCcccch
Q 028852 39 VEDDVRPDFPCPYCYEDFDIASL--CSHLEDEHSCE---SKVTVCPICSVKVA 86 (202)
Q Consensus 39 ~~dd~~~~F~CPfC~e~~dv~~L--~~H~~~eH~~e---~~~vVCPVCa~~vs 86 (202)
.+++....+.||.|.+.+....+ |.|.-=..+.. .....||+|...+.
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 8 GSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CSSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CcccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 34456678999999885543322 34421111110 12457999998764
No 146
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.01 E-value=0.47 Score=28.23 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=22.8
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HTS-SCCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 59999999944 56778888654 543 35567775
No 147
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=85.95 E-value=0.31 Score=29.03 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=22.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+. --....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTT-SCSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 588999988 4455778888654 543 34566765
No 148
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=85.81 E-value=0.36 Score=34.35 Aligned_cols=29 Identities=31% Similarity=0.724 Sum_probs=25.0
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESK 74 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~ 74 (202)
.|.|++|+. -.....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 599999999 55788999999999998754
No 149
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.80 E-value=0.49 Score=28.11 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=23.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+. --....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 589999999 4456778888654 543 35667775
No 150
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.42 E-value=0.47 Score=28.03 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=22.3
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+. --....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCS-SSSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 588999998 4456778888654 543 34566765
No 151
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.22 E-value=0.54 Score=27.77 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=22.1
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+.. -....|..|.. .|.. .++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQR-IHTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHT-TTSS-CCSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence 5889999984 45577888865 4543 34566764
No 152
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=85.22 E-value=0.46 Score=32.23 Aligned_cols=46 Identities=26% Similarity=0.730 Sum_probs=28.4
Q ss_pred CCCCCcccCCCCCCCCCHHH-----hhhhcccccCCC---CCceecCCCcccch
Q 028852 41 DDVRPDFPCPYCYEDFDIAS-----LCSHLEDEHSCE---SKVTVCPICSVKVA 86 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~~-----L~~H~~~eH~~e---~~~vVCPVCa~~vs 86 (202)
++....+.||.|.+.|.... -|.|.-=.++.. .....||+|...+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 10 EHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 63 (78)
T ss_dssp TTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCC
T ss_pred ccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccC
Confidence 34556889999988665331 366653333321 13468999988764
No 153
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.19 E-value=0.48 Score=28.16 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=22.5
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|+.|+..| ....|..|.. .|....++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence 58899998844 4577888864 4544245566765
No 154
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=84.75 E-value=0.6 Score=26.99 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=19.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+..| ....|..|... |..+ ++-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 48888888844 45667777543 4432 445554
No 155
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.73 E-value=0.79 Score=27.15 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=23.0
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|.. .|.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQR-VHTG-EKPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHT-TTSS-SCCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence 59999999955 5677888854 4543 35567764
No 156
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=84.70 E-value=0.4 Score=29.66 Aligned_cols=27 Identities=30% Similarity=0.516 Sum_probs=22.5
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCE 72 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e 72 (202)
-|.||.|-. =-+...|..|-+..|..+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 599999988 557788999999999764
No 157
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.35 E-value=0.46 Score=28.26 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=22.0
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |.. .++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 58899998844 45678888654 543 35567765
No 158
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=84.35 E-value=0.29 Score=33.21 Aligned_cols=47 Identities=21% Similarity=0.470 Sum_probs=27.7
Q ss_pred CCCCCcccCCCCCCCCCHHH--hhhhc-----ccccCC----CCCceecCCCcccchh
Q 028852 41 DDVRPDFPCPYCYEDFDIAS--LCSHL-----EDEHSC----ESKVTVCPICSVKVAR 87 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~~--L~~H~-----~~eH~~----e~~~vVCPVCa~~vs~ 87 (202)
+++...+.||.|.+.+.... -|.|. -..+.. ......||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 34566899999988554322 24442 111111 1236789999887643
No 159
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=84.21 E-value=0.63 Score=38.12 Aligned_cols=41 Identities=12% Similarity=0.243 Sum_probs=27.8
Q ss_pred CCCCCCcccCCCCCC------------CCCHHHhhhhcccccCCCCCceecCCCcccch
Q 028852 40 EDDVRPDFPCPYCYE------------DFDIASLCSHLEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 40 ~dd~~~~F~CPfC~e------------~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs 86 (202)
..+++..|.||.|.+ .|+...+..|+...+ ..||+|-..+.
T Consensus 100 ~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~------~tcP~t~~~l~ 152 (179)
T 2f42_A 100 KREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG------HFDPVTRSPLT 152 (179)
T ss_dssp CCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC------SBCTTTCCBCC
T ss_pred ccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC------CCCCCCcCCCC
Confidence 346788999999854 456666666665421 16999988653
No 160
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=84.18 E-value=0.56 Score=36.44 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=26.8
Q ss_pred CCcccCCCCCC-CCCHHHhhhhcccccCCCCCc
Q 028852 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKV 75 (202)
Q Consensus 44 ~~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~ 75 (202)
...+.|=||.+ --++..+..||.+.|.++-..
T Consensus 13 ~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 13 RQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 35699999999 668999999999999986543
No 161
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.05 E-value=0.63 Score=27.37 Aligned_cols=33 Identities=27% Similarity=0.274 Sum_probs=22.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|+.|+..| ....|..|... |.. .++..|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 58999999944 56778888654 443 34567765
No 162
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=83.45 E-value=0.5 Score=33.62 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=25.1
Q ss_pred CceecCCCcccc-----hhhhhhhhhhcccchhhhhhh
Q 028852 74 KVTVCPICSVKV-----ARDMLSHITLQHGHLFKLQRR 106 (202)
Q Consensus 74 ~~vVCPVCa~~v-----s~d~i~Hl~~~H~~~~k~~r~ 106 (202)
..++|.+|-..+ +.||.+||...|...|..-.+
T Consensus 28 ~~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~~ 65 (73)
T 2ct5_A 28 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVK 65 (73)
T ss_dssp SCCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHHHCC
T ss_pred CEEECCCCCccccCCCChHhHHHHHHHHCHHHHHHHHH
Confidence 567788886665 679999999999988764333
No 163
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.43 E-value=0.46 Score=28.10 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=22.0
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |.. .++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHS-CCCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 58899998844 56677888654 443 34567775
No 164
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=83.23 E-value=0.69 Score=36.11 Aligned_cols=46 Identities=26% Similarity=0.554 Sum_probs=23.4
Q ss_pred cccCC--CCCCCCCHHHhhhhcccccCCCCCceecCCCcccc-hhhhhhhhh
Q 028852 46 DFPCP--YCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHIT 94 (202)
Q Consensus 46 ~F~CP--fC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v-s~d~i~Hl~ 94 (202)
.+.|| -|.+-+.+..|..|.. + =+-+.+.||-|...+ ..++..|+.
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~-~--C~~~~v~C~~C~~~~~r~~l~~H~~ 130 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQA-H--CEFALMDCPQCQRPFQKFHINIHIL 130 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHT-T--CTTSEEECTTTCCEEEGGGHHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHHh-c--CCceeeECCCCChHHHHHHHHHHhh
Confidence 35564 3666556666666641 1 122345666665543 445555554
No 165
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=83.17 E-value=0.31 Score=36.23 Aligned_cols=38 Identities=24% Similarity=0.477 Sum_probs=28.3
Q ss_pred ccCCCCCCCCCHHHhhhhcccccCC--------------CCCceecCCCccc
Q 028852 47 FPCPYCYEDFDIASLCSHLEDEHSC--------------ESKVTVCPICSVK 84 (202)
Q Consensus 47 F~CPfC~e~~dv~~L~~H~~~eH~~--------------e~~~vVCPVCa~~ 84 (202)
-.||.||+-+|-.+|+.-...--.+ +...-.||+|..-
T Consensus 9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEE 60 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEE 60 (95)
T ss_dssp EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCE
T ss_pred ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHH
Confidence 4799999999999999876554333 2223569999875
No 166
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.87 E-value=0.52 Score=27.89 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=22.3
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|.. .|.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQR-IHTG-EKSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHT-TTSS-CCCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHH-HhCC-CCCCCCCC
Confidence 58999999944 4567888865 4543 35567765
No 167
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.81 E-value=0.76 Score=27.34 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=22.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSS-CCCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 58999999955 45778888654 543 34556654
No 168
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=82.32 E-value=0.65 Score=24.14 Aligned_cols=23 Identities=26% Similarity=0.647 Sum_probs=15.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDE 68 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~e 68 (202)
.|.|++|+..| ....|..|....
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~h 25 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLKTHIKTK 25 (30)
T ss_dssp CCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHHH
Confidence 37788888854 446677776543
No 169
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.30 E-value=0.31 Score=33.02 Aligned_cols=47 Identities=21% Similarity=0.530 Sum_probs=27.1
Q ss_pred CCCCCcccCCCCCCCCCHHH--hhhhcccccCC---------CCCceecCCCcccchh
Q 028852 41 DDVRPDFPCPYCYEDFDIAS--LCSHLEDEHSC---------ESKVTVCPICSVKVAR 87 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~~--L~~H~~~eH~~---------e~~~vVCPVCa~~vs~ 87 (202)
+++...+.||.|.+.+.... -|.|.-=..+. ......||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 35567899999988554321 13332111111 1236789999887643
No 170
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=82.02 E-value=1.1 Score=36.68 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=23.8
Q ss_pred CCCCCcccCCCCCCCCC------------HHHhhhhcccccCCCCCceecCCCcccch
Q 028852 41 DDVRPDFPCPYCYEDFD------------IASLCSHLEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~d------------v~~L~~H~~~eH~~e~~~vVCPVCa~~vs 86 (202)
.+.+..|.||.|.+-|. ...+..|+.. ....||+|-..+.
T Consensus 203 ~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~------~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQR------VGHFNPVTRSPLT 254 (281)
T ss_dssp CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHH------TCSSCTTTCCCCC
T ss_pred CCCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHH------CCCCCcCCCCCCc
Confidence 35678999999977332 2333333322 1223999988763
No 171
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=81.98 E-value=0.79 Score=28.51 Aligned_cols=28 Identities=25% Similarity=0.439 Sum_probs=22.9
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCES 73 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~ 73 (202)
.|.||+|+.. -....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 6999999994 467899999888887643
No 172
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.71 E-value=1.2 Score=25.75 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=20.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+..| ....|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTR-THTGE-SGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHT-TTCCS-SSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhh-hcCCC-CCCCCC
Confidence 58899999844 5567788864 35433 344554
No 173
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.70 E-value=0.46 Score=31.32 Aligned_cols=46 Identities=20% Similarity=0.395 Sum_probs=27.0
Q ss_pred CCCCcccCCCCCCCCCHH--HhhhhcccccCC----CCCceecCCCcccchh
Q 028852 42 DVRPDFPCPYCYEDFDIA--SLCSHLEDEHSC----ESKVTVCPICSVKVAR 87 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~--~L~~H~~~eH~~----e~~~vVCPVCa~~vs~ 87 (202)
.....+.||.|.+.+... .-|.|.-=..+. ......||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp SCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred cCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 456689999998844322 234442111111 2456789999887644
No 174
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.65 E-value=0.68 Score=30.29 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=28.5
Q ss_pred cccCCC--CCC-CCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 46 DFPCPY--CYE-DFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 46 ~F~CPf--C~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
.|.|++ |+. --....|..|+.. |.. .+...|++|...
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~ 77 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGPS 77 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSCC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCCC
Confidence 699999 999 4567889999874 443 366899999753
No 175
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.59 E-value=1 Score=26.59 Aligned_cols=34 Identities=24% Similarity=0.147 Sum_probs=25.5
Q ss_pred cccCC--CCCC-CCCHHHhhhhcccccCCCCCceecCCC
Q 028852 46 DFPCP--YCYE-DFDIASLCSHLEDEHSCESKVTVCPIC 81 (202)
Q Consensus 46 ~F~CP--fC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVC 81 (202)
.|.|+ .|+. -.....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59997 8999 4566788899655 543 456789988
No 176
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.42 E-value=0.77 Score=26.69 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=18.9
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+. --....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 488888888 4445667777643 4332 344453
No 177
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.26 E-value=0.63 Score=30.68 Aligned_cols=29 Identities=31% Similarity=0.543 Sum_probs=24.1
Q ss_pred CcccCCCCCC-CCCHHHhhhhcccccCCCC
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~ 73 (202)
..|.||+|+. -.....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 3699999999 4467899999999998753
No 178
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=80.83 E-value=1.9 Score=28.97 Aligned_cols=46 Identities=26% Similarity=0.481 Sum_probs=34.2
Q ss_pred CCCCC-CHHHhhhhcccccCCCC-----CceecC--CCcccc--hhhhhhhhhhcc
Q 028852 52 CYEDF-DIASLCSHLEDEHSCES-----KVTVCP--ICSVKV--ARDMLSHITLQH 97 (202)
Q Consensus 52 C~e~~-dv~~L~~H~~~eH~~e~-----~~vVCP--VCa~~v--s~d~i~Hl~~~H 97 (202)
|++.| +...|+.|+..+|.... .+.+|. -|.... ...|+.||...|
T Consensus 9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 78844 56679999999997654 367887 786552 457999998776
No 179
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=80.75 E-value=1 Score=30.68 Aligned_cols=47 Identities=26% Similarity=0.583 Sum_probs=33.9
Q ss_pred CcccCC-CCCCCCCHHHhhhhcccccCCCCCceecCCCcccc-hhhhhhhh
Q 028852 45 PDFPCP-YCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-ARDMLSHI 93 (202)
Q Consensus 45 ~~F~CP-fC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v-s~d~i~Hl 93 (202)
....|| .|+..+-...|-.|+..+ -..+.+.|+-|...+ ..++..|.
T Consensus 15 ~~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 15 NVIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp SCCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred cccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 457785 798888888888887643 335678899997765 55677666
No 180
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.44 E-value=1.5 Score=25.91 Aligned_cols=32 Identities=31% Similarity=0.448 Sum_probs=21.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+..| ....|..|... |.. .+.-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSG-EKPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCC-SCCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 58999999955 45678888654 543 3455665
No 181
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.31 E-value=0.53 Score=27.97 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=21.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+. --....|..|... |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQ-ETLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSS-CCSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 488888888 4455677788654 433 34556664
No 182
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=80.27 E-value=1.2 Score=28.83 Aligned_cols=43 Identities=21% Similarity=0.369 Sum_probs=26.7
Q ss_pred CCcccCCCCCCCCCHHH--hhhhcccccCCCCCceecCCCcccch
Q 028852 44 RPDFPCPYCYEDFDIAS--LCSHLEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~--L~~H~~~eH~~e~~~vVCPVCa~~vs 86 (202)
...+.||.|.+.|.... =|.|.-=..........||+|...+.
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 34788999988554332 24453333344445678999988653
No 183
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.05 E-value=0.68 Score=27.47 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=21.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPI 80 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPV 80 (202)
.|.|++|+..| ....|..|... |.. .+.-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSR-EKSSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHH-TTCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 58899998844 45667778654 433 24556664
No 184
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=79.96 E-value=0.76 Score=32.32 Aligned_cols=44 Identities=20% Similarity=0.533 Sum_probs=27.1
Q ss_pred CCCcccCCCCCCCCCHHH---h---hhhc-----ccccCCCCCceecCCCcccchh
Q 028852 43 VRPDFPCPYCYEDFDIAS---L---CSHL-----EDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~~---L---~~H~-----~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
....+.||.|-+.++... + |-|. -.... +..+..||+|...+..
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~-~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR-TDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHT-TSSCSBCTTTCCBCSS
T ss_pred cccCCcCCccCccCccccccccccCCCCCcCHHHHHHHH-hcCCCCCCCCCCccCC
Confidence 344789999999775432 2 5552 21111 2346789999887643
No 185
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=79.88 E-value=0.35 Score=32.90 Aligned_cols=44 Identities=23% Similarity=0.509 Sum_probs=25.6
Q ss_pred CCCCCcccCCCCCCCCCHHH-h--hhhcccccCC-----CCCceecCCCccc
Q 028852 41 DDVRPDFPCPYCYEDFDIAS-L--CSHLEDEHSC-----ESKVTVCPICSVK 84 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~~-L--~~H~~~eH~~-----e~~~vVCPVCa~~ 84 (202)
+++...+.||.|.+.|.... | |.|.-=..+. ......||+|...
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 10 DPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred ccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 45677899999988554432 2 3442211111 1223689999885
No 186
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.34 E-value=1.1 Score=26.39 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=20.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+. --....|..|+.. |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTG-KKPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCC-CCCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 588888988 4455677788653 433 3455665
No 187
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=79.30 E-value=1.3 Score=26.18 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=21.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+..| ....|..|... |.. .+.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTG-ERSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSS-CCSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 58899999854 45778888654 543 3455665
No 188
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=79.28 E-value=1.1 Score=29.52 Aligned_cols=37 Identities=11% Similarity=0.128 Sum_probs=28.6
Q ss_pred CcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcc
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV 83 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~ 83 (202)
..|.|++|+. -.....|..|+...|. .+...|++|..
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~ 83 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGP 83 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCC
Confidence 4699999999 4477889999876654 34568998865
No 189
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=78.88 E-value=0.42 Score=31.63 Aligned_cols=45 Identities=22% Similarity=0.516 Sum_probs=24.6
Q ss_pred CCCCcccCCCCCCCCCH----H-HhhhhcccccCCC---CCceecCCCcccch
Q 028852 42 DVRPDFPCPYCYEDFDI----A-SLCSHLEDEHSCE---SKVTVCPICSVKVA 86 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv----~-~L~~H~~~eH~~e---~~~vVCPVCa~~vs 86 (202)
+......||.|.+.|.. . --|.|.-=..+.. .....||+|...+.
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 62 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSC
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCcccc
Confidence 44567899999876542 1 2255532111111 12346999987654
No 190
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=78.87 E-value=0.63 Score=32.91 Aligned_cols=31 Identities=13% Similarity=0.535 Sum_probs=23.5
Q ss_pred CCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 43 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
..-.|.|+-|+..|++. +...+.||-|..++
T Consensus 25 ~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 45689999999987653 23467899998854
No 191
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=78.80 E-value=1.6 Score=22.28 Aligned_cols=20 Identities=25% Similarity=0.617 Sum_probs=13.9
Q ss_pred ccCCCCCCCCC-HHHhhhhcc
Q 028852 47 FPCPYCYEDFD-IASLCSHLE 66 (202)
Q Consensus 47 F~CPfC~e~~d-v~~L~~H~~ 66 (202)
|.|+.|+..|. ...|..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 77888888554 466777754
No 192
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.73 E-value=1.6 Score=24.97 Aligned_cols=31 Identities=26% Similarity=0.504 Sum_probs=18.9
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceec
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVC 78 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVC 78 (202)
.|.|+.|+..| ....|..|... |..+ ++-.|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 41 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HTVK-SGPSS 41 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TSCC-SSCCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hCCC-CCCCC
Confidence 48888888844 45667778653 4432 33444
No 193
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=78.65 E-value=0.68 Score=30.30 Aligned_cols=32 Identities=25% Similarity=0.562 Sum_probs=17.9
Q ss_pred cccCCCCCCCCCHH-HhhhhcccccCCCCC--ceecCCCcc
Q 028852 46 DFPCPYCYEDFDIA-SLCSHLEDEHSCESK--VTVCPICSV 83 (202)
Q Consensus 46 ~F~CPfC~e~~dv~-~L~~H~~~eH~~e~~--~vVCPVCa~ 83 (202)
.|.|+.||--+|.. +-- .+++.- .-+||||.+
T Consensus 4 ~y~C~vCGyvyd~~~Gd~------t~f~~lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDN------VPFDQLPDDWCCPVCGV 38 (46)
T ss_dssp CEEETTTCCEECGGGGTT------CCGGGSCTTCBCTTTCC
T ss_pred EEECCCCCeEEeCCcCCC------cchhhCCCCCcCcCCCC
Confidence 57788887744432 111 333332 348888876
No 194
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.25 E-value=0.57 Score=26.31 Aligned_cols=21 Identities=33% Similarity=0.619 Sum_probs=16.6
Q ss_pred cccCCCCCCCCCH--HHhhhhcc
Q 028852 46 DFPCPYCYEDFDI--ASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~dv--~~L~~H~~ 66 (202)
.|.|++|+..|.. ..|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHH
Confidence 5999999996665 57888864
No 195
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=78.18 E-value=1.3 Score=22.86 Aligned_cols=22 Identities=27% Similarity=0.573 Sum_probs=15.3
Q ss_pred cccCCCCCCCC-CHHHhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~ 67 (202)
.|.|+.|+..| ....|..|...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 37899998854 45667777543
No 196
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=77.08 E-value=0.42 Score=37.31 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=31.8
Q ss_pred CCcCCCCC-CCCCcccCCCCCC--CCCHHHhhhhcccccCCCCCceecCCCcccchhhhhhhhh
Q 028852 34 IDDFEVED-DVRPDFPCPYCYE--DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHIT 94 (202)
Q Consensus 34 ~~~~~~~d-d~~~~F~CPfC~e--~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs~d~i~Hl~ 94 (202)
+++++.++ +..-.+.|| ||. .+....|-. ...|.||-|+..+..-|..|-.
T Consensus 99 ~~~m~~~e~~~~f~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~~~ 152 (155)
T 2l6l_A 99 LEEMSWNEGDHSFYLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNHHH 152 (155)
T ss_dssp TTTSEEETTTTEEEEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCCCC
T ss_pred HHHhccccCCcEEEEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEccccc
Confidence 45555432 334579999 988 444444432 1679999999987655555543
No 197
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=76.92 E-value=0.74 Score=28.62 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=22.1
Q ss_pred ccCCCCCC-CCCHHHhhhhcccccCC
Q 028852 47 FPCPYCYE-DFDIASLCSHLEDEHSC 71 (202)
Q Consensus 47 F~CPfC~e-~~dv~~L~~H~~~eH~~ 71 (202)
--|-||-+ .-|+..|..|+.+.|-.
T Consensus 10 qhcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46999998 89999999999999864
No 198
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=76.90 E-value=0.94 Score=36.59 Aligned_cols=27 Identities=22% Similarity=0.625 Sum_probs=18.8
Q ss_pred CCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
...|.||.||.-++ + .-+.+||||...
T Consensus 136 ~~~~~C~~CG~i~~--~------------~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAV--D------------EAPEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEE--S------------CCCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeC--C------------CCCCCCCCCCCC
Confidence 46899999998443 0 123499999864
No 199
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=76.71 E-value=1.7 Score=24.15 Aligned_cols=22 Identities=32% Similarity=0.659 Sum_probs=16.5
Q ss_pred cccCCCCCCCC-CHHHhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~ 67 (202)
.|.||+|+..| ....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 59999999955 45777778543
No 200
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=76.65 E-value=1 Score=23.17 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=14.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|+.|+..| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHH
Confidence 37788888844 4666777754
No 201
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=76.63 E-value=1.1 Score=27.39 Aligned_cols=25 Identities=20% Similarity=0.458 Sum_probs=11.8
Q ss_pred ccCCCCCCC-CCHHHhhhhcccccCC
Q 028852 47 FPCPYCYED-FDIASLCSHLEDEHSC 71 (202)
Q Consensus 47 F~CPfC~e~-~dv~~L~~H~~~eH~~ 71 (202)
|.|++|+.. .....|..|+...|..
T Consensus 8 ~~C~~C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 8 YACDICGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp EECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred EECCCcCcccCCHHHHHHHhhhhcCC
Confidence 555555552 2344455554423443
No 202
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.58 E-value=1.3 Score=29.58 Aligned_cols=48 Identities=21% Similarity=0.360 Sum_probs=28.1
Q ss_pred CCCcccCCCCCCCCCHH-Hh-hhhcccccCC---CCCceecCCCcccchhhhh
Q 028852 43 VRPDFPCPYCYEDFDIA-SL-CSHLEDEHSC---ESKVTVCPICSVKVARDML 90 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~-~L-~~H~~~eH~~---e~~~vVCPVCa~~vs~d~i 90 (202)
....+.||.|.+.+... .| |.|.-=..+. -.....||+|...+..+.+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHH
T ss_pred CCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhc
Confidence 34578999998854432 22 5553211111 1234689999998866544
No 203
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.54 E-value=2 Score=29.29 Aligned_cols=47 Identities=30% Similarity=0.576 Sum_probs=27.2
Q ss_pred CCCCCcccCCCCCCCCCH----H-Hh-hhhcccccCC------CCCceecCCCcccchh
Q 028852 41 DDVRPDFPCPYCYEDFDI----A-SL-CSHLEDEHSC------ESKVTVCPICSVKVAR 87 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv----~-~L-~~H~~~eH~~------e~~~vVCPVCa~~vs~ 87 (202)
+++...+.||.|.+.|.. . .| |.|.-=..+. ......||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred hhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 345668999999987665 1 11 3332111111 1235789999887644
No 204
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.48 E-value=1.7 Score=25.24 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=19.7
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+.. -....|..|.. .|..+ +.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~ 44 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQK-THAAK-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGG-GGCCC-CCTTCC
T ss_pred CeECCCCCCccCCHHHHHHHHH-HcCCC-CCcCCC
Confidence 5888888884 45567778865 35432 334443
No 205
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.20 E-value=1 Score=26.67 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=18.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+..| ....|..|... |..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE-RHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC-CBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC-CCCCCC
Confidence 47788887743 45667777543 4332 344454
No 206
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=75.91 E-value=1.2 Score=22.79 Aligned_cols=21 Identities=33% Similarity=0.876 Sum_probs=14.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|+.|+..| ....|..|..
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHHH
Confidence 37788888855 4556667754
No 207
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.50 E-value=2.8 Score=23.84 Aligned_cols=22 Identities=27% Similarity=0.572 Sum_probs=14.9
Q ss_pred cccCCCCCCCC-CHHHhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~ 67 (202)
.|.|++|+..| ....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRV 33 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGG
T ss_pred CeeCCCccchhCCHHHHHHHHHH
Confidence 58888888844 45667777543
No 208
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=75.17 E-value=0.91 Score=27.80 Aligned_cols=24 Identities=33% Similarity=0.620 Sum_probs=19.7
Q ss_pred cccCCCCCCC-CCHHHhhhhccccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEH 69 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH 69 (202)
.|.||+|+.. .....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 5999999994 56788999987665
No 209
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.93 E-value=0.44 Score=32.07 Aligned_cols=47 Identities=19% Similarity=0.434 Sum_probs=27.6
Q ss_pred CCCCCcccCCCCCCCCC-HHHh--hhhcccccCCC---CCceecCCCcccchh
Q 028852 41 DDVRPDFPCPYCYEDFD-IASL--CSHLEDEHSCE---SKVTVCPICSVKVAR 87 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~d-v~~L--~~H~~~eH~~e---~~~vVCPVCa~~vs~ 87 (202)
+++...+.||.|.+.+. ...| |.|.-=..+.. .....||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 45667899999988554 3333 55532111110 114679999887643
No 210
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.89 E-value=1.9 Score=28.19 Aligned_cols=28 Identities=25% Similarity=0.484 Sum_probs=23.5
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCES 73 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~ 73 (202)
.|.|++|+. --....|..|+...|..+.
T Consensus 38 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~ 66 (78)
T 2d9h_A 38 RFPCEFCGKRFEKPDSVAAHRSKSHPALL 66 (78)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred ccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence 699999999 4467889999988898754
No 211
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.75 E-value=1.6 Score=25.37 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=19.2
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|++|+.. -....|..|... |..+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSGQ-SGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSSS-CSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCCC-CCCCCC
Confidence 4888888884 445667778543 4432 344453
No 212
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.75 E-value=1.2 Score=24.74 Aligned_cols=22 Identities=41% Similarity=0.631 Sum_probs=16.7
Q ss_pred cccCCCCCCCC-CHHHhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~ 67 (202)
.|.|++|+..| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHH
Confidence 69999999944 56778888653
No 213
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=74.72 E-value=1.3 Score=22.81 Aligned_cols=22 Identities=41% Similarity=0.810 Sum_probs=16.0
Q ss_pred cccCCCCCCCC-CHHHhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~ 67 (202)
.|.|+.|+..| ....|..|...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 48899999854 56778888653
No 214
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=74.69 E-value=0.68 Score=34.40 Aligned_cols=12 Identities=50% Similarity=1.068 Sum_probs=10.2
Q ss_pred CcccCCCCCCCC
Q 028852 45 PDFPCPYCYEDF 56 (202)
Q Consensus 45 ~~F~CPfC~e~~ 56 (202)
-.|.||.||++|
T Consensus 50 F~FkCP~CgEEF 61 (95)
T 2k5c_A 50 FVFKCPVCGEEF 61 (95)
T ss_dssp SEEECTTTCCEE
T ss_pred HhhcCCCccHHH
Confidence 479999999966
No 215
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=74.37 E-value=1.2 Score=23.15 Aligned_cols=20 Identities=35% Similarity=0.747 Sum_probs=13.5
Q ss_pred ccCCCCCCCC-CHHHhhhhcc
Q 028852 47 FPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 47 F~CPfC~e~~-dv~~L~~H~~ 66 (202)
|.|+.|+..| ....|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHT
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 7788888844 4566777754
No 216
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.34 E-value=0.69 Score=30.15 Aligned_cols=44 Identities=20% Similarity=0.597 Sum_probs=25.5
Q ss_pred CCCCcccCCCCCCCCCHH---------HhhhhcccccCCC---CCceecCCCcccc
Q 028852 42 DVRPDFPCPYCYEDFDIA---------SLCSHLEDEHSCE---SKVTVCPICSVKV 85 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~---------~L~~H~~~eH~~e---~~~vVCPVCa~~v 85 (202)
.....+.||.|.+.+... .-|.|.-=..+.. .....||+|-..+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 66 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI 66 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCC
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCcc
Confidence 445679999999977654 2244432111111 1245799998754
No 217
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=74.22 E-value=2.4 Score=28.15 Aligned_cols=11 Identities=45% Similarity=1.102 Sum_probs=6.0
Q ss_pred CCcccCCCCCC
Q 028852 44 RPDFPCPYCYE 54 (202)
Q Consensus 44 ~~~F~CPfC~e 54 (202)
-++..|||||.
T Consensus 21 lP~IrCpyCGy 31 (48)
T 4ayb_P 21 LPGVRCPYCGY 31 (48)
T ss_dssp CSSSCCTTTCC
T ss_pred CCCcccCccCc
Confidence 45555555554
No 218
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=74.03 E-value=1.5 Score=38.27 Aligned_cols=42 Identities=24% Similarity=0.524 Sum_probs=25.8
Q ss_pred CCcccCCCCCCCCCHHH---hhhhcccc-----cCCCCCceecCC--Ccccc
Q 028852 44 RPDFPCPYCYEDFDIAS---LCSHLEDE-----HSCESKVTVCPI--CSVKV 85 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~---L~~H~~~e-----H~~e~~~vVCPV--Ca~~v 85 (202)
...|.||.|..-|.... -|.|.-+. +..+.....||| |...+
T Consensus 179 ~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l 230 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVV 230 (267)
T ss_dssp BCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEE
T ss_pred ceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcC
Confidence 56899999987443322 34553332 222334578999 98875
No 219
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=73.72 E-value=0.63 Score=29.30 Aligned_cols=40 Identities=23% Similarity=0.603 Sum_probs=22.6
Q ss_pred cccCCCCCCCCCH----HHh--hhhcccccCC---CCCceecCCCcccc
Q 028852 46 DFPCPYCYEDFDI----ASL--CSHLEDEHSC---ESKVTVCPICSVKV 85 (202)
Q Consensus 46 ~F~CPfC~e~~dv----~~L--~~H~~~eH~~---e~~~vVCPVCa~~v 85 (202)
...||.|.+++.. ..| |.|.-=.+.. -.+...||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 4679999886654 223 5553222111 12356899997653
No 220
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=73.69 E-value=1.3 Score=22.93 Aligned_cols=21 Identities=29% Similarity=0.735 Sum_probs=14.9
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHH
Confidence 48899999854 4566777753
No 221
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.23 E-value=2.2 Score=24.81 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=19.9
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.|.|+.|+..| ....|..|... |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL-HAG-ESGPSSG 44 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH-HTT-SCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-HCC-CCCCCCC
Confidence 58899998855 45667788654 433 2344453
No 222
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=73.21 E-value=2.4 Score=22.98 Aligned_cols=8 Identities=25% Similarity=1.157 Sum_probs=4.1
Q ss_pred ccCCCCCC
Q 028852 47 FPCPYCYE 54 (202)
Q Consensus 47 F~CPfC~e 54 (202)
|.|+.|+.
T Consensus 8 ~~C~~C~k 15 (35)
T 2elx_A 8 YVCALCLK 15 (35)
T ss_dssp EECSSSCC
T ss_pred eECCCCcc
Confidence 45555555
No 223
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=73.07 E-value=1.1 Score=28.28 Aligned_cols=25 Identities=28% Similarity=0.955 Sum_probs=20.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~ 70 (202)
.|.||+|+..| ....|..|+...|.
T Consensus 40 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 40 VYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred CeECCCCCCccCCHHHHHHHHHHHcC
Confidence 69999999954 66789999887764
No 224
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=72.12 E-value=2.4 Score=21.81 Aligned_cols=20 Identities=20% Similarity=0.527 Sum_probs=10.9
Q ss_pred cccCCCCCCCC-CHHHhhhhc
Q 028852 46 DFPCPYCYEDF-DIASLCSHL 65 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~ 65 (202)
.|.|+.|+..| ....|..|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~ 23 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHY 23 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHH
Confidence 36666666633 335555554
No 225
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=72.02 E-value=3.2 Score=22.56 Aligned_cols=19 Identities=37% Similarity=0.763 Sum_probs=9.5
Q ss_pred ccCCCCCCCC-CHHHhhhhc
Q 028852 47 FPCPYCYEDF-DIASLCSHL 65 (202)
Q Consensus 47 F~CPfC~e~~-dv~~L~~H~ 65 (202)
|.|++|+..| ....|..|.
T Consensus 8 ~~C~~C~k~f~~~~~l~~H~ 27 (35)
T 1srk_A 8 FVCRICLSAFTTKANCARHL 27 (35)
T ss_dssp EECSSSCCEESSHHHHHHHH
T ss_pred eeCCCCCcccCCHHHHHHHH
Confidence 5555555533 344455553
No 226
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.81 E-value=0.93 Score=30.32 Aligned_cols=44 Identities=27% Similarity=0.593 Sum_probs=24.2
Q ss_pred CCCCcccCCCCCCCCCHHH-----hhhhcccccCCC---CCceecCCCcccc
Q 028852 42 DVRPDFPCPYCYEDFDIAS-----LCSHLEDEHSCE---SKVTVCPICSVKV 85 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~-----L~~H~~~eH~~e---~~~vVCPVCa~~v 85 (202)
+....+.||.|.+.|.... -|.|.-=.++.. .....||+|...+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~ 62 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPV 62 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBC
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccc
Confidence 3445789999988664321 245531111111 1234899998765
No 227
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=73.70 E-value=0.85 Score=23.84 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=15.1
Q ss_pred cccCCCCCCCCC-HHHhhhhccc
Q 028852 46 DFPCPYCYEDFD-IASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~d-v~~L~~H~~~ 67 (202)
.|.|++|+..|. ...|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 488999998554 4567777543
No 228
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.57 E-value=2.4 Score=23.25 Aligned_cols=21 Identities=29% Similarity=0.466 Sum_probs=16.5
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|+.|+..| ....|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHH
Confidence 59999999966 4677888854
No 229
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.56 E-value=1.9 Score=25.10 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=12.7
Q ss_pred cccCCCCCCC-CCHHHhhhhcc
Q 028852 46 DFPCPYCYED-FDIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~ 66 (202)
.|.|++|+.. -....|..|..
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHER 33 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHhH
Confidence 4777777773 33456666654
No 230
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.10 E-value=1.5 Score=24.79 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=18.0
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~ 70 (202)
.|.|+.|+..| ....|..|....|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 59999999955 56778888444453
No 231
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=70.07 E-value=1.1 Score=35.26 Aligned_cols=29 Identities=31% Similarity=0.590 Sum_probs=21.7
Q ss_pred CCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.-.|.|+-||..|+.. .....||.|...+
T Consensus 130 ~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 130 KWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred cEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 4579999999977643 3346999998754
No 232
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.02 E-value=3.2 Score=23.63 Aligned_cols=21 Identities=29% Similarity=0.524 Sum_probs=14.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|++|+..| ....|..|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~ 31 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHER 31 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGG
T ss_pred CeECCCCCCCcCCHHHHHHHHH
Confidence 47888888844 4566777754
No 233
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=69.93 E-value=1.1 Score=28.44 Aligned_cols=24 Identities=25% Similarity=0.443 Sum_probs=18.8
Q ss_pred CcccCCCCCCCCCHHHhhhhccccc
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEH 69 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH 69 (202)
..|.||-|+..|.+....+| .+.|
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH-~D~H 31 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEH-MDYH 31 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHH-HHHH
T ss_pred CCcccccccCcCCcccccch-hhHH
Confidence 47899999998888888888 4444
No 234
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.45 E-value=1.8 Score=23.71 Aligned_cols=21 Identities=33% Similarity=0.596 Sum_probs=16.2
Q ss_pred cccCCCCCCCCC-HHHhhhhcc
Q 028852 46 DFPCPYCYEDFD-IASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~d-v~~L~~H~~ 66 (202)
.|.|++|+..|. ...|..|..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 599999999554 567888864
No 235
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.08 E-value=1.4 Score=24.43 Aligned_cols=22 Identities=23% Similarity=0.608 Sum_probs=16.4
Q ss_pred cccCCCCCCC-CCHHHhhhhccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~ 67 (202)
.|.|++|+.. .....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 5999999994 455778888654
No 236
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=68.86 E-value=0.85 Score=33.81 Aligned_cols=42 Identities=26% Similarity=0.540 Sum_probs=24.9
Q ss_pred CCcccCCCCCCCCCHHH--hhhh-----cccccCCCCCceecCCCcccch
Q 028852 44 RPDFPCPYCYEDFDIAS--LCSH-----LEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~--L~~H-----~~~eH~~e~~~vVCPVCa~~vs 86 (202)
...+.||.|.+.|.... -|.| |-..+. ......||+|...+.
T Consensus 50 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 50 EETFQCICCQELVFRPITTVCQHNVCKDCLDRSF-RAQVFSCPACRYDLG 98 (124)
T ss_dssp HHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCC
T ss_pred ccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHH-hHCcCCCCCCCccCC
Confidence 44799999988554322 2444 222221 234568999988764
No 237
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=68.82 E-value=2.7 Score=23.12 Aligned_cols=20 Identities=35% Similarity=0.838 Sum_probs=13.7
Q ss_pred ccCCCCCCCC-CHHHhhhhcc
Q 028852 47 FPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 47 F~CPfC~e~~-dv~~L~~H~~ 66 (202)
|.|+.|+..| ....|..|+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 7788888844 5566777754
No 238
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=68.77 E-value=1.2 Score=31.47 Aligned_cols=50 Identities=14% Similarity=0.449 Sum_probs=31.5
Q ss_pred CcccCCCCCCCCCHHHh-----hhh-----cccccCC----C--CCceecCC--Cccc--chhhhhhhhh
Q 028852 45 PDFPCPYCYEDFDIASL-----CSH-----LEDEHSC----E--SKVTVCPI--CSVK--VARDMLSHIT 94 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L-----~~H-----~~~eH~~----e--~~~vVCPV--Ca~~--vs~d~i~Hl~ 94 (202)
..|.||.|.+.+..... |.| |-..|.. + ..++.||. |... +..+.+..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~ll 73 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMV 73 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHHS
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHHC
Confidence 37899999987765432 555 2222211 1 24678999 9988 7766665543
No 239
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.53 E-value=1.9 Score=27.75 Aligned_cols=26 Identities=27% Similarity=0.524 Sum_probs=21.1
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSC 71 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~ 71 (202)
.|.|++|+. -.....|..|+...|..
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 499999999 44678899998877754
No 240
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=68.23 E-value=2.9 Score=27.73 Aligned_cols=14 Identities=36% Similarity=0.992 Sum_probs=11.1
Q ss_pred CCCCCcccCCCCCC
Q 028852 41 DDVRPDFPCPYCYE 54 (202)
Q Consensus 41 dd~~~~F~CPfC~e 54 (202)
++++..|.||.|+.
T Consensus 31 ~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 31 EDLPDDWACPVCGA 44 (52)
T ss_dssp TSSCTTCCCSSSCC
T ss_pred HHCCCCCcCCCCCC
Confidence 45677899999976
No 241
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=68.21 E-value=0.88 Score=37.08 Aligned_cols=27 Identities=19% Similarity=0.496 Sum_probs=18.4
Q ss_pred CcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
..|.|+.||--++-. + -+-+||||.+.
T Consensus 154 ~~~~C~~CG~~~~g~--------~-----~p~~CP~C~~~ 180 (191)
T 1lko_A 154 TKWRCRNCGYVHEGT--------G-----APELCPACAHP 180 (191)
T ss_dssp EEEEETTTCCEEEEE--------E-----CCSBCTTTCCB
T ss_pred ceEEECCCCCEeeCC--------C-----CCCCCCCCcCC
Confidence 379999999855411 1 12299999873
No 242
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=68.21 E-value=2.2 Score=26.02 Aligned_cols=24 Identities=21% Similarity=0.555 Sum_probs=18.9
Q ss_pred cccCCCCCCC-CCHHHhhhhccccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEH 69 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH 69 (202)
.|.|++|+.. .....|..|+...|
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~ 53 (57)
T 1bbo_A 29 PYHCTYCNFSFKTKGNLTKHMKSKA 53 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred CccCCCCCchhcCHHHHHHHHHHhc
Confidence 5999999994 46788999976544
No 243
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=67.76 E-value=0.36 Score=37.68 Aligned_cols=44 Identities=23% Similarity=0.544 Sum_probs=26.8
Q ss_pred CCCCcccCCCCCCCCCHH-Hh--hhhcccccCC----CCCceecCCCcccc
Q 028852 42 DVRPDFPCPYCYEDFDIA-SL--CSHLEDEHSC----ESKVTVCPICSVKV 85 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~-~L--~~H~~~eH~~----e~~~vVCPVCa~~v 85 (202)
++...+.||.|.+.|... .+ |.|.-=..+. ......||+|...+
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKL 100 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBC
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcC
Confidence 445679999998855433 22 4553222222 22357899998876
No 244
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=70.98 E-value=1.1 Score=23.44 Aligned_cols=21 Identities=29% Similarity=0.616 Sum_probs=14.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|++|+..| ....|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 37888888855 4466777754
No 245
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.74 E-value=3.9 Score=22.46 Aligned_cols=20 Identities=25% Similarity=0.546 Sum_probs=10.6
Q ss_pred cccCCCCCCCC-CHHHhhhhc
Q 028852 46 DFPCPYCYEDF-DIASLCSHL 65 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~ 65 (202)
.|.|++|+..| ....|..|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~ 29 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHM 29 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHH
Confidence 36666666633 344555554
No 246
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=67.58 E-value=3.9 Score=27.61 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=24.5
Q ss_pred CCcccCCCCCCCCCHHHhhhhcccccCCCCCceecC
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP 79 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCP 79 (202)
.....|+||+..+-...|-.|.. . -....+.||
T Consensus 42 ~r~v~C~~C~~~~~~~~l~~H~~-~--Cp~~~v~C~ 74 (76)
T 2yuc_A 42 KRRLKCEFCGCDFSGEAYESHEG-M--CPQESSGPS 74 (76)
T ss_dssp TSCCCCSSSCCCCCHHHHHHTTT-S--CTTSSCCCS
T ss_pred CcceECCCCCCccCHHHHHHHHh-H--CCCCccCCC
Confidence 35689999999999999999963 2 223455565
No 247
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=70.57 E-value=1.1 Score=22.90 Aligned_cols=21 Identities=24% Similarity=0.610 Sum_probs=14.4
Q ss_pred cccCCCCCCCCC-HHHhhhhcc
Q 028852 46 DFPCPYCYEDFD-IASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~d-v~~L~~H~~ 66 (202)
.|.|+.|+..|. ...|..|..
T Consensus 2 p~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 2 PYVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 378999988554 456667743
No 248
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=66.99 E-value=0.95 Score=32.03 Aligned_cols=43 Identities=21% Similarity=0.594 Sum_probs=24.3
Q ss_pred CCcccCCCCCCCCCH----H-HhhhhcccccCCC---CCceecCCCcccch
Q 028852 44 RPDFPCPYCYEDFDI----A-SLCSHLEDEHSCE---SKVTVCPICSVKVA 86 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv----~-~L~~H~~~eH~~e---~~~vVCPVCa~~vs 86 (202)
.....||.|.++|.. . --|.|.-=.++.. ..+..||+|...+.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 457899999875543 1 1155532111111 23458999987653
No 249
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=66.93 E-value=1.7 Score=22.64 Aligned_cols=21 Identities=29% Similarity=0.797 Sum_probs=14.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|+.|+..| ....|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 47888888844 4566777753
No 250
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=66.49 E-value=2.1 Score=35.30 Aligned_cols=26 Identities=27% Similarity=0.525 Sum_probs=19.2
Q ss_pred CcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
..|.|+.||--++ + ..+-+||||...
T Consensus 170 ~~~~C~~CG~i~~--g------------~~p~~CP~C~~~ 195 (202)
T 1yuz_A 170 KFHLCPICGYIHK--G------------EDFEKCPICFRP 195 (202)
T ss_dssp CEEECSSSCCEEE--S------------SCCSBCTTTCCB
T ss_pred cEEEECCCCCEEc--C------------cCCCCCCCCCCC
Confidence 5899999998544 1 123799999874
No 251
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.78 E-value=2.5 Score=23.28 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=16.2
Q ss_pred cccCCCCCCC-CCHHHhhhhccc
Q 028852 46 DFPCPYCYED-FDIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~ 67 (202)
.|.|+.|+.. .....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 5999999994 455667788543
No 252
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=65.21 E-value=2.3 Score=30.93 Aligned_cols=43 Identities=23% Similarity=0.488 Sum_probs=25.9
Q ss_pred CCcccCCCCCCCCCHH--Hhhhhc-----ccccCCCCCceecCCCcccchh
Q 028852 44 RPDFPCPYCYEDFDIA--SLCSHL-----EDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~--~L~~H~-----~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
...|.||.|.+.+... --|.|. -.... ......||+|...+..
T Consensus 13 ~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 3479999998844422 234442 22222 2335789999998754
No 253
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.17 E-value=1.6 Score=25.62 Aligned_cols=21 Identities=38% Similarity=0.610 Sum_probs=12.5
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|++|+..| ....|..|..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLR 33 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHHH
Confidence 37777777733 4456666653
No 254
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=64.87 E-value=1.6 Score=31.18 Aligned_cols=16 Identities=19% Similarity=0.629 Sum_probs=13.0
Q ss_pred CCCCcccCCCCCC-CCC
Q 028852 42 DVRPDFPCPYCYE-DFD 57 (202)
Q Consensus 42 d~~~~F~CPfC~e-~~d 57 (202)
.+...|+||||+. .+.
T Consensus 23 ~q~~ky~C~fCgk~~vk 39 (73)
T 1ffk_W 23 KHKKKYKCPVCGFPKLK 39 (73)
T ss_pred hcccCccCCCCCCceeE
Confidence 6778999999998 554
No 255
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=63.80 E-value=2.4 Score=30.49 Aligned_cols=20 Identities=30% Similarity=0.667 Sum_probs=17.4
Q ss_pred cccCCCCCCCCCHHHhhhhc
Q 028852 46 DFPCPYCYEDFDIASLCSHL 65 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~L~~H~ 65 (202)
.--||||+--+.-.+|..|+
T Consensus 30 ~NiCPYC~nRls~eGl~RHV 49 (77)
T 2l7x_A 30 YNICPYCASRLTSDGLARHV 49 (77)
T ss_dssp TTCCTTTCCCCCTTTHHHHH
T ss_pred cccChhhhccCCccchhhhc
Confidence 34699999999999999994
No 256
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.73 E-value=4.4 Score=23.11 Aligned_cols=25 Identities=36% Similarity=0.757 Sum_probs=18.4
Q ss_pred cccCCCCCCCCC-HHHhhhhcccccCC
Q 028852 46 DFPCPYCYEDFD-IASLCSHLEDEHSC 71 (202)
Q Consensus 46 ~F~CPfC~e~~d-v~~L~~H~~~eH~~ 71 (202)
.|.|+.|+..|. ...|..|.. .|..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~~ 36 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLR-IHTG 36 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTT-TTSC
T ss_pred CEECCCCCCccCCHHHHHHHHH-hcCC
Confidence 699999999554 577888965 4443
No 257
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.68 E-value=2 Score=31.33 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=29.1
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
.|.|+.|+..| ....|..|....|..+ ++-.|.||-..
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~~ 88 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKRN 88 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCCS
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccCC
Confidence 59999999954 5678999965667654 67899997653
No 258
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.83 E-value=1.1 Score=30.19 Aligned_cols=43 Identities=26% Similarity=0.566 Sum_probs=24.8
Q ss_pred CCCcccCCCCCCCCCHH----Hh-hhhcccccCCC---CCceecCCCcccc
Q 028852 43 VRPDFPCPYCYEDFDIA----SL-CSHLEDEHSCE---SKVTVCPICSVKV 85 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~----~L-~~H~~~eH~~e---~~~vVCPVCa~~v 85 (202)
......||.|.+.|... .| |.|.-=.++.. ..+..||+|...+
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~ 70 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADS 70 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcC
Confidence 34467899998865533 22 66642222221 1245799998765
No 259
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.19 E-value=2.1 Score=29.00 Aligned_cols=43 Identities=21% Similarity=0.455 Sum_probs=25.1
Q ss_pred CCcccCCCCCC-CCCHHHh-hhhc-ccccCCCCCceecCCCcccchh
Q 028852 44 RPDFPCPYCYE-DFDIASL-CSHL-EDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 44 ~~~F~CPfC~e-~~dv~~L-~~H~-~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
.....|+.|.+ .-++.-| |.|. -=..... ....||+|...+..
T Consensus 13 ~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQE 58 (68)
T ss_dssp CCSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCCC
T ss_pred CCCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchhc
Confidence 34678999988 5454433 4453 1111111 24689999887643
No 260
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=61.67 E-value=3.5 Score=23.23 Aligned_cols=22 Identities=23% Similarity=0.788 Sum_probs=16.4
Q ss_pred cccCCCCCCCC-CHHHhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~ 67 (202)
.|.|+.|+..| ....|..|...
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT
T ss_pred ceECCCCCcccCCHHHHHHHHHH
Confidence 58999999944 56778888653
No 261
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=61.60 E-value=0.96 Score=32.80 Aligned_cols=40 Identities=30% Similarity=0.522 Sum_probs=24.3
Q ss_pred cccCCCCCCCCCHHH------------------h--hhhcccccCCC--------CCceecCCCcccc
Q 028852 46 DFPCPYCYEDFDIAS------------------L--CSHLEDEHSCE--------SKVTVCPICSVKV 85 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~------------------L--~~H~~~eH~~e--------~~~vVCPVCa~~v 85 (202)
...||.|.+.|.... + |.|+-=.++.. .....||+|-+.+
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCcc
Confidence 358999988664322 2 66643333321 3457899998765
No 262
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=61.48 E-value=4.3 Score=23.02 Aligned_cols=21 Identities=29% Similarity=0.572 Sum_probs=13.3
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|++|+..| ....|..|..
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQR 32 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHhh
Confidence 47777777743 4556666754
No 263
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=61.33 E-value=2.9 Score=29.85 Aligned_cols=16 Identities=13% Similarity=0.640 Sum_probs=12.3
Q ss_pred CCCCcccCCCCCC-CCC
Q 028852 42 DVRPDFPCPYCYE-DFD 57 (202)
Q Consensus 42 d~~~~F~CPfC~e-~~d 57 (202)
.+...|.||||+. .+.
T Consensus 22 ~q~~ky~C~fCgk~~vk 38 (72)
T 3jyw_9 22 QQHARYDCSFCGKKTVK 38 (72)
T ss_dssp HHHSCBCCSSCCSSCBS
T ss_pred HhccCccCCCCCCceeE
Confidence 4567899999998 533
No 264
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=61.23 E-value=3.7 Score=22.27 Aligned_cols=20 Identities=35% Similarity=0.835 Sum_probs=12.6
Q ss_pred ccCCCCCCCCCH-HHhhhhcc
Q 028852 47 FPCPYCYEDFDI-ASLCSHLE 66 (202)
Q Consensus 47 F~CPfC~e~~dv-~~L~~H~~ 66 (202)
|.|+.|+..|.. ..|..|..
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 678888775544 44566643
No 265
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.90 E-value=3.1 Score=26.90 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=18.4
Q ss_pred cccCCCCCC-CCCHHHhhhhcccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDE 68 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~e 68 (202)
.|.||+|+. -.....|..|+...
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~H 65 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRIH 65 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHhc
Confidence 599999999 45677899997653
No 266
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.70 E-value=5.7 Score=23.02 Aligned_cols=21 Identities=24% Similarity=0.389 Sum_probs=12.3
Q ss_pred cccCCCCCCCC-CHHHhhhhcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~ 66 (202)
.|.|++|+..| ....|..|..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~ 33 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHER 33 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHG
T ss_pred CeECCCCCcccCchHHHHHHHh
Confidence 46677776633 4455666654
No 267
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=60.69 E-value=5.2 Score=30.90 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=27.2
Q ss_pred CCCCceecCCCcccc--hhhhhhhhhhcccchhhh
Q 028852 71 CESKVTVCPICSVKV--ARDMLSHITLQHGHLFKL 103 (202)
Q Consensus 71 ~e~~~vVCPVCa~~v--s~d~i~Hl~~~H~~~~k~ 103 (202)
.+...++|-.|...- ...++.|+...|+|.+..
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 345679999998874 668999999999997754
No 268
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=60.65 E-value=2.9 Score=30.59 Aligned_cols=13 Identities=31% Similarity=0.846 Sum_probs=11.0
Q ss_pred CCCCcccCCCCCC
Q 028852 42 DVRPDFPCPYCYE 54 (202)
Q Consensus 42 d~~~~F~CPfC~e 54 (202)
.+...|.||||+.
T Consensus 31 ~q~~ky~CpfCGk 43 (83)
T 3j21_i 31 KMRQKHTCPVCGR 43 (83)
T ss_dssp HHHSCBCCSSSCS
T ss_pred HhhcccCCCCCCC
Confidence 4567899999998
No 269
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.25 E-value=4.8 Score=26.80 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=18.7
Q ss_pred CcccCCCCCCCCC-HHHhhhhcc
Q 028852 45 PDFPCPYCYEDFD-IASLCSHLE 66 (202)
Q Consensus 45 ~~F~CPfC~e~~d-v~~L~~H~~ 66 (202)
..|.||-|+..|. ...|..|..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 4899999999777 788999965
No 270
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=60.15 E-value=2.8 Score=30.76 Aligned_cols=41 Identities=22% Similarity=0.485 Sum_probs=24.5
Q ss_pred CcccCCCCCCCC-CHHHh--hhhcccccCCCCC-ceecCCCcccc
Q 028852 45 PDFPCPYCYEDF-DIASL--CSHLEDEHSCESK-VTVCPICSVKV 85 (202)
Q Consensus 45 ~~F~CPfC~e~~-dv~~L--~~H~~~eH~~e~~-~vVCPVCa~~v 85 (202)
..+.||.|.+.| +...| |.|.-=..+.... ...||+|...+
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~ 65 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPA 65 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBC
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcC
Confidence 479999998844 43444 5554333332111 16799998865
No 271
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.80 E-value=4 Score=23.23 Aligned_cols=24 Identities=25% Similarity=0.544 Sum_probs=18.2
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHS 70 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~ 70 (202)
.|.|++|+.. .....|..|.. .|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~-~H~ 35 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVL-IHT 35 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTH-HHH
T ss_pred CEeCCCcChhhCCHHHHHHHHH-HcC
Confidence 5999999994 45677888965 444
No 272
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=59.52 E-value=4.3 Score=23.92 Aligned_cols=19 Identities=32% Similarity=0.683 Sum_probs=12.8
Q ss_pred ceecCCCccc-chhhhhhhh
Q 028852 75 VTVCPICSVK-VARDMLSHI 93 (202)
Q Consensus 75 ~vVCPVCa~~-vs~d~i~Hl 93 (202)
.|-||||-.+ |...+-.|+
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 5789999654 555555554
No 273
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=59.43 E-value=1 Score=32.53 Aligned_cols=42 Identities=29% Similarity=0.573 Sum_probs=25.0
Q ss_pred CCCcccCCCCCCCCC-HHHh--hhhc-----ccccCCCCCceecCCCcccch
Q 028852 43 VRPDFPCPYCYEDFD-IASL--CSHL-----EDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 43 ~~~~F~CPfC~e~~d-v~~L--~~H~-----~~eH~~e~~~vVCPVCa~~vs 86 (202)
+...+.||.|.+.|. ...+ |.|. -..+.. ....||+|...+.
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE--TSKYCPICDVQVH 61 (108)
T ss_dssp HGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHT--SCSBCTTTCCBSC
T ss_pred cCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHH--hCCcCcCCCcccc
Confidence 344899999988443 3333 4452 222211 2378999988764
No 274
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=59.39 E-value=3.2 Score=30.90 Aligned_cols=32 Identities=13% Similarity=0.312 Sum_probs=20.7
Q ss_pred CCCCcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 42 d~~~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.+...|+||||+. .+.. ....--.|.-|-..+
T Consensus 32 ~q~~ky~CpfCgk~~vkR------------~a~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 32 SQHSKYFCEFCGKFAVKR------------KAVGIWGCKDCGKVK 64 (92)
T ss_dssp HHHSCBCCTTTCSSCBEE------------EETTEEECSSSCCEE
T ss_pred HHhccccCcccCCCeeEe------------cCcceEEcCCCCCEE
Confidence 4567899999998 4332 112334588887765
No 275
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=59.37 E-value=2.4 Score=31.82 Aligned_cols=30 Identities=27% Similarity=0.531 Sum_probs=22.5
Q ss_pred CCCCcccCCCCCCCCCHHHhhhhcccccCCCCCce-ecCCCccc
Q 028852 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVT-VCPICSVK 84 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~v-VCPVCa~~ 84 (202)
+.+..|.|+-||..|... .... .||.|...
T Consensus 69 ~~p~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp EECCEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred eccceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 456789999999977652 2356 89999775
No 276
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=58.63 E-value=3.2 Score=30.92 Aligned_cols=32 Identities=16% Similarity=0.549 Sum_probs=20.6
Q ss_pred CCCCcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 42 d~~~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.+...|+||||+. .+... ...--.|.-|-..+
T Consensus 32 ~q~~ky~CpfCgk~~vkR~------------a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 32 QQHARYDCSFCGKKTVKRG------------AAGIWTCSCCKKTV 64 (92)
T ss_dssp HHHSCCCCSSSCSSCCEEE------------ETTEEECTTTCCEE
T ss_pred HHhcCCcCCCCCCceeeec------------ccceEEcCCCCCEE
Confidence 4567899999998 53321 12233588887765
No 277
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=57.74 E-value=2.4 Score=29.94 Aligned_cols=44 Identities=36% Similarity=0.622 Sum_probs=26.0
Q ss_pred CCcccCCCCCCCCCHH-Hh--hhhcccccCC---CCCceecCCCcccchh
Q 028852 44 RPDFPCPYCYEDFDIA-SL--CSHLEDEHSC---ESKVTVCPICSVKVAR 87 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~-~L--~~H~~~eH~~---e~~~vVCPVCa~~vs~ 87 (202)
...+.||.|.+.|... .+ |.|.-=..+. -.....||+|...+..
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 4579999999855443 33 5553211111 0124689999987653
No 278
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=56.79 E-value=3.4 Score=31.46 Aligned_cols=32 Identities=16% Similarity=0.518 Sum_probs=20.9
Q ss_pred CCCCcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 42 d~~~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.+...|+||||+. .+.. ....--.|.-|-..+
T Consensus 32 ~q~aky~CpfCgk~~vKR------------~a~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 32 TQHAKYGCPFCGKVAVKR------------AAVGIWKCKPCKKII 64 (103)
T ss_dssp HHHSCEECTTTCCEEEEE------------EETTEEEETTTTEEE
T ss_pred HhhcCCCCCCCCCceeee------------cCcceEEcCCCCCEE
Confidence 4567899999998 5332 112334588887765
No 279
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.77 E-value=6.6 Score=27.86 Aligned_cols=40 Identities=25% Similarity=0.610 Sum_probs=21.3
Q ss_pred CCcccCCCCCC-------------CCCHHHhhhhcccccCCCCCceecCC--Cccc
Q 028852 44 RPDFPCPYCYE-------------DFDIASLCSHLEDEHSCESKVTVCPI--CSVK 84 (202)
Q Consensus 44 ~~~F~CPfC~e-------------~~dv~~L~~H~~~eH~~e~~~vVCPV--Ca~~ 84 (202)
...|.||.|.+ .|+...+..++...+. ......||+ |...
T Consensus 5 ~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccC-cCCCCCCCcCcCccc
Confidence 34677887765 3333333344333221 123568999 9754
No 280
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.59 E-value=7.3 Score=25.28 Aligned_cols=25 Identities=20% Similarity=0.360 Sum_probs=19.5
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCC
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSC 71 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~ 71 (202)
.|.|++|+. -.....|..|+.. |..
T Consensus 46 ~~~C~~C~~~f~~~~~L~~H~~~-H~~ 71 (77)
T 2cot_A 46 PYKCDECGKAFIQRSHLIGHHRV-HTG 71 (77)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-SCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC
Confidence 599999999 5567889999864 543
No 281
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=56.59 E-value=3.3 Score=30.02 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=20.8
Q ss_pred CCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 43 VRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
+...|+|||||.+.-. ........||-|-...
T Consensus 24 q~~~y~Cp~CG~~~v~-----------r~atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 24 MNEDHACPNCGEDRVD-----------RQGTGIWQCSYCDYKF 55 (83)
T ss_dssp HHSCEECSSSCCEEEE-----------EEETTEEEETTTCCEE
T ss_pred ccccCcCCCCCCccee-----------ccCCCeEECCCCCCEe
Confidence 3458999999972110 1123478899998864
No 282
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=56.13 E-value=2 Score=33.42 Aligned_cols=44 Identities=23% Similarity=0.491 Sum_probs=25.6
Q ss_pred CCCcccCCCCCCCCCHH--Hhhhh-----cccccCCCCCceecCCCcccchh
Q 028852 43 VRPDFPCPYCYEDFDIA--SLCSH-----LEDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~--~L~~H-----~~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
+...|.||.|.+.|... --|.| |-..+. ......||+|-..+..
T Consensus 75 l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 75 LEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSF-KAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCCT
T ss_pred CccCCEeecCChhhcCCEEcCCCCchhHHHHHHHH-HhCCCcCCCCCccCCC
Confidence 34579999998844432 22333 222222 1234589999887654
No 283
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.89 E-value=5.8 Score=27.43 Aligned_cols=26 Identities=35% Similarity=0.580 Sum_probs=20.9
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~ 71 (202)
.|.|++|+..| ....|..|+...|..
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 69999999955 577899998776643
No 284
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=55.24 E-value=6.9 Score=25.68 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=20.4
Q ss_pred cccCCCCCCC-CCHHHhhhhcccccCCC
Q 028852 46 DFPCPYCYED-FDIASLCSHLEDEHSCE 72 (202)
Q Consensus 46 ~F~CPfC~e~-~dv~~L~~H~~~eH~~e 72 (202)
.|.|+.|+.. -....|..|.. .|..+
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~-~Htge 58 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLK-VHQNK 58 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGG-GGSCC
T ss_pred CeECCCCCCCcCCHHHHHHHhC-ccCCC
Confidence 6999999994 45788999965 57654
No 285
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=54.78 E-value=2.4 Score=30.33 Aligned_cols=43 Identities=21% Similarity=0.547 Sum_probs=23.5
Q ss_pred CcccCCCCCCCCCHH--Hhhhhcc-----cccCCC-CCceecCCCcccchh
Q 028852 45 PDFPCPYCYEDFDIA--SLCSHLE-----DEHSCE-SKVTVCPICSVKVAR 87 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~--~L~~H~~-----~eH~~e-~~~vVCPVCa~~vs~ 87 (202)
..+.||.|.+.+... --|.|.- ..+... .....||+|...+..
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 468899998854332 1244421 111111 223589999887643
No 286
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=54.73 E-value=6 Score=27.58 Aligned_cols=31 Identities=6% Similarity=0.110 Sum_probs=21.2
Q ss_pred CCCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcc
Q 028852 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~ 83 (202)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKL 34 (68)
T ss_dssp SSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 5667899999976544321 236688998854
No 287
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=54.32 E-value=7 Score=27.10 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=23.1
Q ss_pred CCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.-.|.|.-|+..+++. ....+.||-|..++
T Consensus 19 ~v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 4589999999987743 13568999998765
No 288
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=53.21 E-value=1.2 Score=29.37 Aligned_cols=43 Identities=21% Similarity=0.631 Sum_probs=24.5
Q ss_pred CcccCCCCCCCCCHH---------HhhhhcccccCCC---CCceecCCCcccchh
Q 028852 45 PDFPCPYCYEDFDIA---------SLCSHLEDEHSCE---SKVTVCPICSVKVAR 87 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~---------~L~~H~~~eH~~e---~~~vVCPVCa~~vs~ 87 (202)
..+.||.|.+.+... .-|.|.-=..+.. .....||+|...+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 368899999977653 1244421111110 123589999887643
No 289
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=53.15 E-value=8.1 Score=26.13 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=23.3
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSV 83 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~ 83 (202)
-|.|+.|++.| ....|..|... |..+ ...|-+|..
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~-Htg~--~~~~~~~~~ 48 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ-HGVT--SLQLGYIDL 48 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH-HTTT--SCCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHhhhhh-hCCC--ccccccccC
Confidence 58999999955 45678888654 5543 345666654
No 290
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=53.00 E-value=5.5 Score=24.31 Aligned_cols=22 Identities=36% Similarity=0.659 Sum_probs=17.1
Q ss_pred cccCCCCCCCC-CHHHhhhhccc
Q 028852 46 DFPCPYCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~ 67 (202)
.|.|+.|+..| ....|..|...
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 59999999944 56778888653
No 291
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=52.26 E-value=2.1 Score=30.68 Aligned_cols=44 Identities=27% Similarity=0.466 Sum_probs=25.2
Q ss_pred CCcccCCCCCCCCCHHHh---hhhcccccCC----CCCceecCCCcccchh
Q 028852 44 RPDFPCPYCYEDFDIASL---CSHLEDEHSC----ESKVTVCPICSVKVAR 87 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L---~~H~~~eH~~----e~~~vVCPVCa~~vs~ 87 (202)
...+.||.|.+.|..... |.|.-=..+. ......||+|...+..
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 20 AEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 457999999886654333 4442111111 1112689999887643
No 292
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=52.04 E-value=3 Score=34.85 Aligned_cols=39 Identities=18% Similarity=0.427 Sum_probs=26.1
Q ss_pred CCcccCCCCCCCCCHHHhhhhcccccC-CCCCceecCCCcccc
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLEDEHS-CESKVTVCPICSVKV 85 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~~eH~-~e~~~vVCPVCa~~v 85 (202)
+-.|.||.|+..+...++.. .... ....-..||-|...+
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp CEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBC
T ss_pred eeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcC
Confidence 45899999998655556543 1111 345567899998875
No 293
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=51.51 E-value=3.3 Score=31.28 Aligned_cols=41 Identities=27% Similarity=0.566 Sum_probs=23.3
Q ss_pred CcccCCCCCCCCC-HHHh-hhhcccccCC---CCCceecCCCcccc
Q 028852 45 PDFPCPYCYEDFD-IASL-CSHLEDEHSC---ESKVTVCPICSVKV 85 (202)
Q Consensus 45 ~~F~CPfC~e~~d-v~~L-~~H~~~eH~~---e~~~vVCPVCa~~v 85 (202)
..+.||.|.+.|. ...| |.|.-=..+. -.+...||+|-..+
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDI 97 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBC
T ss_pred ccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcC
Confidence 3578999988443 3322 4442211111 12356799998765
No 294
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=51.37 E-value=4.4 Score=31.36 Aligned_cols=32 Identities=28% Similarity=0.667 Sum_probs=22.9
Q ss_pred CCCCcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 42 DVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 42 d~~~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
.+...|.||||+. .+-..+ ..-..|+-|-..+
T Consensus 56 ~q~akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 56 EMNEDHACPNCGEDRVDRQG------------TGIWQCSYCDYKF 88 (116)
T ss_dssp HHHSCEECSSSCCEEEEEEE------------TTEEEETTTCCEE
T ss_pred HhccCCcCCCCCCceeEecC------------ceeEECCCCCCEE
Confidence 4567899999998 554333 2466799998875
No 295
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=51.37 E-value=6.4 Score=23.19 Aligned_cols=19 Identities=42% Similarity=0.751 Sum_probs=8.6
Q ss_pred cccCCCCCC-CCCHHHhhhh
Q 028852 46 DFPCPYCYE-DFDIASLCSH 64 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H 64 (202)
.|.||.|.. -=|...|..|
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H 22 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIH 22 (28)
T ss_dssp CEECTTSSCEESSHHHHHHH
T ss_pred cccCccccccCcChHHHHHH
Confidence 344555544 4444444444
No 296
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=51.28 E-value=5.2 Score=26.80 Aligned_cols=37 Identities=19% Similarity=0.524 Sum_probs=25.2
Q ss_pred CCcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccchhhhhh
Q 028852 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91 (202)
Q Consensus 44 ~~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs~d~i~ 91 (202)
.....||.|+. .+- .. .+...+||..|...+..+.|.
T Consensus 9 l~~~~Cp~C~~~~lv---------~D--~~~ge~vC~~CGlVl~e~~iD 46 (58)
T 1dl6_A 9 LPRVTCPNHPDAILV---------ED--YRAGDMICPECGLVVGDRVID 46 (58)
T ss_dssp CSCCSBTTBSSSCCE---------EC--SSSCCEECTTTCCEECCSCCC
T ss_pred cccccCcCCCCCcee---------Ee--CCCCeEEeCCCCCEEeccccc
Confidence 34568999976 421 12 345679999998888776553
No 297
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=51.25 E-value=11 Score=19.73 Aligned_cols=22 Identities=32% Similarity=0.640 Sum_probs=15.3
Q ss_pred cccCC--CCCCCC-CHHHhhhhccc
Q 028852 46 DFPCP--YCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CP--fC~e~~-dv~~L~~H~~~ 67 (202)
.|.|+ .|+..| ....|..|...
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHH
Confidence 37887 898854 56678888543
No 298
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=50.90 E-value=6.6 Score=27.50 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=20.9
Q ss_pred CCCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcc
Q 028852 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~ 83 (202)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR-----------AQAELVCNADRL 34 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCc
Confidence 4667899999977444321 235678998854
No 299
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=50.88 E-value=3.5 Score=30.78 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=22.2
Q ss_pred CcccCCCCCCCCCHHH-hhhhcccccCC-----CCCceecCCCccc
Q 028852 45 PDFPCPYCYEDFDIAS-LCSHLEDEHSC-----ESKVTVCPICSVK 84 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~-L~~H~~~eH~~-----e~~~vVCPVCa~~ 84 (202)
..+.|+||+..++... -++|+.-.-.. +.-..+|+-|-..
T Consensus 34 ~~~~C~yCg~~~~~~~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~ 79 (112)
T 2qgp_A 34 ARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNR 79 (112)
T ss_dssp HHTBCTTTCCBCCGGGEEEEESSCTTTTCCCSTTTEEEEEHHHHHH
T ss_pred cCCcCCCCCCcCCCCCcEEEEEeehhcCCCCChhhChhhCHHHHHH
Confidence 3589999999766433 24555422111 1223567777544
No 300
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=50.87 E-value=1.1 Score=28.61 Aligned_cols=42 Identities=21% Similarity=0.635 Sum_probs=24.8
Q ss_pred cccCCCCCCCCCHH---------HhhhhcccccCCC---CCceecCCCcccchh
Q 028852 46 DFPCPYCYEDFDIA---------SLCSHLEDEHSCE---SKVTVCPICSVKVAR 87 (202)
Q Consensus 46 ~F~CPfC~e~~dv~---------~L~~H~~~eH~~e---~~~vVCPVCa~~vs~ 87 (202)
.+.||.|.+.+... .-|.|.-=..... .....||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 57899999877643 2355532111111 124589999887654
No 301
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=50.30 E-value=5.4 Score=28.79 Aligned_cols=37 Identities=22% Similarity=0.438 Sum_probs=25.4
Q ss_pred cccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccchh
Q 028852 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
...||.|...++...+..- ........||||-..+..
T Consensus 48 ~~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~~~ 84 (133)
T 4ap4_A 48 ANTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGYSE 84 (133)
T ss_dssp CSBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBHHH
T ss_pred CCCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCcccc
Confidence 3489999998876654332 234567889999886543
No 302
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=49.59 E-value=5.7 Score=29.20 Aligned_cols=8 Identities=25% Similarity=0.737 Sum_probs=5.3
Q ss_pred CcccCCCC
Q 028852 45 PDFPCPYC 52 (202)
Q Consensus 45 ~~F~CPfC 52 (202)
..|.|+.|
T Consensus 34 ~~y~C~vC 41 (87)
T 1s24_A 34 LKWICITC 41 (87)
T ss_dssp CEEEETTT
T ss_pred ceEECCCC
Confidence 46777777
No 303
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=49.23 E-value=6.1 Score=26.13 Aligned_cols=14 Identities=36% Similarity=0.968 Sum_probs=11.8
Q ss_pred CCCCCcccCCCCCC
Q 028852 41 DDVRPDFPCPYCYE 54 (202)
Q Consensus 41 dd~~~~F~CPfC~e 54 (202)
++++..+.||.|+.
T Consensus 30 ~~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 30 EDLPDDWVCPLCGA 43 (52)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 36788999999987
No 304
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=48.90 E-value=6.1 Score=26.41 Aligned_cols=14 Identities=36% Similarity=0.911 Sum_probs=11.7
Q ss_pred CCCCCcccCCCCCC
Q 028852 41 DDVRPDFPCPYCYE 54 (202)
Q Consensus 41 dd~~~~F~CPfC~e 54 (202)
++++..+.||.|+.
T Consensus 31 ~~lP~dw~CP~Cga 44 (55)
T 2v3b_B 31 EDIPADWVCPDCGV 44 (55)
T ss_dssp GGSCTTCCCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 35778899999987
No 305
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=48.48 E-value=7.1 Score=28.31 Aligned_cols=14 Identities=43% Similarity=1.032 Sum_probs=11.5
Q ss_pred CCCCCcccCCCCCC
Q 028852 41 DDVRPDFPCPYCYE 54 (202)
Q Consensus 41 dd~~~~F~CPfC~e 54 (202)
++++..|.||.|+.
T Consensus 55 edlPddW~CPvCga 68 (81)
T 2kn9_A 55 DDIPDDWSCPDCGA 68 (81)
T ss_dssp TTSCTTCCCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 46778899999986
No 306
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=48.30 E-value=13 Score=19.42 Aligned_cols=22 Identities=23% Similarity=0.502 Sum_probs=15.3
Q ss_pred cccCC--CCCCCC-CHHHhhhhccc
Q 028852 46 DFPCP--YCYEDF-DIASLCSHLED 67 (202)
Q Consensus 46 ~F~CP--fC~e~~-dv~~L~~H~~~ 67 (202)
.|.|+ .|+..| ....|..|...
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 47888 798844 45677788543
No 307
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=48.06 E-value=4.3 Score=31.60 Aligned_cols=43 Identities=19% Similarity=0.528 Sum_probs=24.8
Q ss_pred CCCCcccCCCCCCCCCHHHhhhhcc---cc--cC---CCCCceecCCCccc
Q 028852 42 DVRPDFPCPYCYEDFDIASLCSHLE---DE--HS---CESKVTVCPICSVK 84 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~L~~H~~---~e--H~---~e~~~vVCPVCa~~ 84 (202)
+.+..+.|+-||..+....-..-+. .+ |- .-.....||.|...
T Consensus 66 ~~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~ 116 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSH 116 (139)
T ss_dssp EECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCC
T ss_pred ecCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCC
Confidence 4567999999999777654111111 11 00 01125789999775
No 308
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.87 E-value=8.5 Score=22.06 Aligned_cols=19 Identities=26% Similarity=0.404 Sum_probs=8.8
Q ss_pred ccCCCCCC-CCCHHHhhhhc
Q 028852 47 FPCPYCYE-DFDIASLCSHL 65 (202)
Q Consensus 47 F~CPfC~e-~~dv~~L~~H~ 65 (202)
|.|+.|+. --....|..|.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~ 32 (44)
T 2eox_A 13 YNCNECGKAFTRIFHLTRHQ 32 (44)
T ss_dssp EEETTTTEEESSSHHHHTTH
T ss_pred eECcccCcccCCHHHHHHHH
Confidence 55555555 22334444453
No 309
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=46.94 E-value=7.1 Score=27.27 Aligned_cols=31 Identities=10% Similarity=0.348 Sum_probs=20.9
Q ss_pred CCCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcc
Q 028852 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~ 83 (202)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LLeiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (69)
T 2pk7_A 4 KLLDILACPICKGPLKLSA-----------DKTELISKGAGL 34 (69)
T ss_dssp CGGGTCCCTTTCCCCEECT-----------TSSEEEETTTTE
T ss_pred HHHhheeCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 4567899999976544321 235689999854
No 310
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=46.94 E-value=6.1 Score=27.53 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=20.7
Q ss_pred CCCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcc
Q 028852 42 DVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~ 83 (202)
.+.....||.|.-.+.... +....+||-|..
T Consensus 4 ~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~ 34 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVFDK-----------SKDELICKGDRL 34 (68)
T ss_dssp CCEEECBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 4556889999976544321 245678999854
No 311
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=46.70 E-value=7 Score=26.19 Aligned_cols=14 Identities=36% Similarity=0.902 Sum_probs=11.8
Q ss_pred CCCCCcccCCCCCC
Q 028852 41 DDVRPDFPCPYCYE 54 (202)
Q Consensus 41 dd~~~~F~CPfC~e 54 (202)
++++..+.||.|+.
T Consensus 31 e~lP~dw~CP~Cg~ 44 (54)
T 4rxn_A 31 KDIPDDWVCPLCGV 44 (54)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hHCCCCCcCcCCCC
Confidence 36778999999987
No 312
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=46.42 E-value=10 Score=26.98 Aligned_cols=25 Identities=28% Similarity=0.616 Sum_probs=20.2
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHS 70 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~ 70 (202)
.|.|++|+..| ....|..|+...|.
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 49999999955 56779999877664
No 313
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.30 E-value=10 Score=26.62 Aligned_cols=26 Identities=23% Similarity=0.533 Sum_probs=20.8
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCC
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSC 71 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~ 71 (202)
.|.|+.|++.| ....|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 69999999966 457899996677754
No 314
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=46.23 E-value=7.8 Score=24.61 Aligned_cols=35 Identities=20% Similarity=0.514 Sum_probs=23.2
Q ss_pred CcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCcccchhhhh
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVKVARDML 90 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs~d~i 90 (202)
..+.||.|+- .+.. + .+....||+.|-..+..+.|
T Consensus 4 ~~~~CP~C~~~~l~~---------d--~~~gelvC~~CG~v~~e~~i 39 (50)
T 1pft_A 4 KQKVCPACESAELIY---------D--PERGEIVCAKCGYVIEENII 39 (50)
T ss_dssp SCCSCTTTSCCCEEE---------E--TTTTEEEESSSCCBCCCCCC
T ss_pred ccEeCcCCCCcceEE---------c--CCCCeEECcccCCccccccc
Confidence 3688999976 3211 1 24567999999877655544
No 315
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=46.06 E-value=1.9 Score=31.40 Aligned_cols=46 Identities=17% Similarity=0.307 Sum_probs=25.4
Q ss_pred CCCCcccCCCCCCCCCHHH--hhhhcccccCC----CCCceecCCCcccchh
Q 028852 42 DVRPDFPCPYCYEDFDIAS--LCSHLEDEHSC----ESKVTVCPICSVKVAR 87 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv~~--L~~H~~~eH~~----e~~~vVCPVCa~~vs~ 87 (202)
++...|.||.|.+.+.... -|.|.-=..+. ......||+|...+..
T Consensus 19 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 19 HFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred hccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 4456899999988554322 23332111111 1124579999988643
No 316
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=45.37 E-value=6.8 Score=23.41 Aligned_cols=20 Identities=30% Similarity=0.482 Sum_probs=14.7
Q ss_pred cccCCCCCCCC-CHHHhhhhc
Q 028852 46 DFPCPYCYEDF-DIASLCSHL 65 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~ 65 (202)
-|.|+.|++.| ....|..|.
T Consensus 8 p~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETTTTEECSCHHHHHHHH
T ss_pred CeECCCCCCccCCHhHccCcC
Confidence 58899998844 456777775
No 317
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=45.18 E-value=2.5 Score=32.63 Aligned_cols=43 Identities=16% Similarity=0.384 Sum_probs=25.7
Q ss_pred CCCCCcccCCCCCCCCCH--HHhhhhc-----ccccCCCCCceecCCCccc
Q 028852 41 DDVRPDFPCPYCYEDFDI--ASLCSHL-----EDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv--~~L~~H~-----~~eH~~e~~~vVCPVCa~~ 84 (202)
+.+...|.||.|.+-|.. ..-|.|. -... .......||+|...
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~-~~~~~~~CP~Cr~~ 75 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASI-LSSGPQNCAACVHE 75 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHH-GGGSCEECHHHHHT
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHH-HhcCCCCCCCCCCc
Confidence 456779999999884432 2234442 2221 12344689999774
No 318
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=45.03 E-value=5.4 Score=29.13 Aligned_cols=10 Identities=30% Similarity=0.999 Sum_probs=7.9
Q ss_pred cCCCCCCCCC
Q 028852 48 PCPYCYEDFD 57 (202)
Q Consensus 48 ~CPfC~e~~d 57 (202)
+||+||..++
T Consensus 49 ~CPvCgs~l~ 58 (112)
T 1l8d_A 49 KCPVCGRELT 58 (112)
T ss_dssp ECTTTCCEEC
T ss_pred CCCCCCCcCC
Confidence 6999988666
No 319
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=44.37 E-value=7.9 Score=27.14 Aligned_cols=14 Identities=36% Similarity=0.823 Sum_probs=11.7
Q ss_pred CCCCCcccCCCCCC
Q 028852 41 DDVRPDFPCPYCYE 54 (202)
Q Consensus 41 dd~~~~F~CPfC~e 54 (202)
++++..|.||.|+.
T Consensus 35 ~~lPddw~CP~Cga 48 (70)
T 1dx8_A 35 VDLSDSFMCPACRS 48 (70)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hhCCCCCcCCCCCC
Confidence 45778899999987
No 320
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=44.12 E-value=4.8 Score=33.96 Aligned_cols=25 Identities=28% Similarity=0.499 Sum_probs=22.3
Q ss_pred CCCcccCCCCCCCCCHHHhhhhccc
Q 028852 43 VRPDFPCPYCYEDFDIASLCSHLED 67 (202)
Q Consensus 43 ~~~~F~CPfC~e~~dv~~L~~H~~~ 67 (202)
.|+-|.|-.|++.+|+..|..|+..
T Consensus 151 FWQFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 151 FWQFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EEEEEECTTTCCEEEGGGHHHHHHT
T ss_pred EEEEEehhhcCceecHHHHHHHHHH
Confidence 4788999999999999999999654
No 321
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=42.93 E-value=1.8 Score=30.49 Aligned_cols=51 Identities=22% Similarity=0.327 Sum_probs=26.4
Q ss_pred cccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccchhhhhhhhhhcccch
Q 028852 46 DFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHL 100 (202)
Q Consensus 46 ~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs~d~i~Hl~~~H~~~ 100 (202)
.|.|++|+..| ....|..|... |.. .++..|..|.. ...++.|....-|.+
T Consensus 25 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~~~~--~~~~~~~~~~~~~~~ 76 (88)
T 1x6f_A 25 TYQCKHCDSKLQSTAELTSHLNI-HNE-EFQKRAKRQER--RKQLLSKQKYADGAF 76 (88)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHH-HHHHHCCCCSC--CCCCCCCCCCCCCSS
T ss_pred CCcCCCCCCEeCCHHHHHHHHHH-hCC-CCCcccchhhh--HHHHHhhhccccccc
Confidence 47777777743 44566667543 432 23445655543 234455544444443
No 322
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=42.90 E-value=10 Score=26.30 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=21.2
Q ss_pred CCCCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcc
Q 028852 41 DDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSV 83 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~ 83 (202)
..+.....||.|.-.+.... +....+||-|..
T Consensus 5 ~~LLeiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 5 PQLLEVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp GGGTCCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred HHHHHHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 35667899999976443221 245678998854
No 323
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.11 E-value=12 Score=26.67 Aligned_cols=29 Identities=17% Similarity=0.455 Sum_probs=20.0
Q ss_pred ceecCCCcccc---------hhhhhhhhhhcccchhhh
Q 028852 75 VTVCPICSVKV---------ARDMLSHITLQHGHLFKL 103 (202)
Q Consensus 75 ~vVCPVCa~~v---------s~d~i~Hl~~~H~~~~k~ 103 (202)
.++|..|-..+ +.+|.+||...|...++.
T Consensus 28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~ 65 (76)
T 2djr_A 28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEK 65 (76)
T ss_dssp CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHH
T ss_pred EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHHh
Confidence 45555554443 458999999999888754
No 324
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=41.57 E-value=9.5 Score=31.87 Aligned_cols=25 Identities=36% Similarity=0.688 Sum_probs=21.2
Q ss_pred CCcccCCCCCCCC-C-HHHhhhhcccc
Q 028852 44 RPDFPCPYCYEDF-D-IASLCSHLEDE 68 (202)
Q Consensus 44 ~~~F~CPfC~e~~-d-v~~L~~H~~~e 68 (202)
...+.|+.|+.+| + +..|-.|++++
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHH
Confidence 4468999999988 3 99999998875
No 325
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=41.52 E-value=8.3 Score=31.26 Aligned_cols=11 Identities=27% Similarity=0.558 Sum_probs=6.4
Q ss_pred hhhhhhhhccc
Q 028852 88 DMLSHITLQHG 98 (202)
Q Consensus 88 d~i~Hl~~~H~ 98 (202)
++..|+...|+
T Consensus 54 ~l~~H~~~~H~ 64 (193)
T 2a25_A 54 AVMPHLMHQHK 64 (193)
T ss_dssp THHHHHHHHCT
T ss_pred HHHHHHHHHCC
Confidence 55556655555
No 326
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=41.34 E-value=11 Score=37.63 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=23.5
Q ss_pred CCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
-..|.||.|+..|..-+-. .-.+.+..+.||.|.-.
T Consensus 247 s~~~~c~~~~~~~~~~~~~-----~fsfn~p~g~C~~C~G~ 282 (916)
T 3pih_A 247 SENLMCPVCGIGFPEITPK-----LFSFNSPYGACPNCHGL 282 (916)
T ss_dssp ESSCBCTTTCCCCCCCSGG-----GGCTTSTTTBCTTTTTS
T ss_pred cccccCcccCCccCCCCHh-----hcCCCCCCCcCCeeecc
Confidence 4679999999765432221 12345567999999754
No 327
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=40.71 E-value=6.9 Score=28.60 Aligned_cols=47 Identities=17% Similarity=0.371 Sum_probs=26.4
Q ss_pred CCCCCcccCCCCCCCCCHHH--hhhhcccccCC----CCCceecCCCcccchh
Q 028852 41 DDVRPDFPCPYCYEDFDIAS--LCSHLEDEHSC----ESKVTVCPICSVKVAR 87 (202)
Q Consensus 41 dd~~~~F~CPfC~e~~dv~~--L~~H~~~eH~~----e~~~vVCPVCa~~vs~ 87 (202)
+.+...|.||.|.+.+.... -|.|.-=.-+. ......||+|...+..
T Consensus 13 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred cCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 45677899999988554322 24442111111 1112389999887643
No 328
>3h0l_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_B 3h0r_B*
Probab=39.92 E-value=9.7 Score=35.67 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=17.0
Q ss_pred cccccCCCCCceecCCCcccch
Q 028852 65 LEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 65 ~~~eH~~e~~~vVCPVCa~~vs 86 (202)
|......+++.-|||||...||
T Consensus 27 ~~~~fg~~PNt~v~pv~lg~PG 48 (478)
T 3h0l_B 27 CKVEFGAEPNTNVCPVCLGMPG 48 (478)
T ss_dssp CBCCTTCCTTCSCCTTTTTCTT
T ss_pred CCcccCCCCccccCccccCCCC
Confidence 4444556788999999999974
No 329
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.40 E-value=3.2 Score=27.24 Aligned_cols=45 Identities=18% Similarity=0.438 Sum_probs=25.6
Q ss_pred CCCCcccCCCCCCCCCH-HHhhhhcccccCC---CCCceecCCCcccch
Q 028852 42 DVRPDFPCPYCYEDFDI-ASLCSHLEDEHSC---ESKVTVCPICSVKVA 86 (202)
Q Consensus 42 d~~~~F~CPfC~e~~dv-~~L~~H~~~eH~~---e~~~vVCPVCa~~vs 86 (202)
+....+.||.|.+.+.. .--|.|.-=..+. -.....||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSSCCCSSCHHHHHCTT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHHHCcCcCCCcCCccc
Confidence 44568999999884433 2224453111111 124678999977653
No 330
>3al0_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=39.36 E-value=10 Score=35.62 Aligned_cols=18 Identities=17% Similarity=0.650 Sum_probs=14.4
Q ss_pred cCCCCCceecCCCcccch
Q 028852 69 HSCESKVTVCPICSVKVA 86 (202)
Q Consensus 69 H~~e~~~vVCPVCa~~vs 86 (202)
...+++.-|||||...||
T Consensus 30 fg~~pNt~vcpv~lg~PG 47 (482)
T 3al0_B 30 FELPPNTAICPVCTGQPG 47 (482)
T ss_dssp TTCCTTSSCCTTTTTCTT
T ss_pred ccCCCcCccCceecCCCC
Confidence 345688899999999974
No 331
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=39.34 E-value=15 Score=32.79 Aligned_cols=32 Identities=19% Similarity=0.423 Sum_probs=19.9
Q ss_pred cccCCCCCCCCCHHHhhhhcccccCCCCCceecCCC-cccchhhhh
Q 028852 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPIC-SVKVARDML 90 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVC-a~~vs~d~i 90 (202)
...|||||-.+.. +-+.-+|||| .+.+|.+-+
T Consensus 278 ~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~ 310 (320)
T 3mkr_B 278 VEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVI 310 (320)
T ss_dssp CEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCC
T ss_pred CccCCCCCCeech-------------hhCCCCCCCCcCcccCCccc
Confidence 3489999864321 2245699999 445665543
No 332
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=39.04 E-value=8.8 Score=25.90 Aligned_cols=43 Identities=26% Similarity=0.618 Sum_probs=23.9
Q ss_pred CCcccCCCCCCCC-CHHHh-hhhc-ccccCCCCCceecCCCcccchh
Q 028852 44 RPDFPCPYCYEDF-DIASL-CSHL-EDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 44 ~~~F~CPfC~e~~-dv~~L-~~H~-~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
...+.||.|.+.+ +...| |.|. -=..+... ...||+|...+..
T Consensus 22 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 22 QEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEA-VDKCPMCYTVITF 67 (74)
T ss_dssp HHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTT-CSBCTTTCCBCSE
T ss_pred ccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhc-CccCCCcCcCccC
Confidence 4468999998844 33331 3443 11111111 1789999887643
No 333
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=38.96 E-value=20 Score=24.66 Aligned_cols=22 Identities=14% Similarity=0.400 Sum_probs=17.5
Q ss_pred CCCCHHHHHHHHhcccchhhhHHHH
Q 028852 170 PSLSHEEREKRIRQGAGRASFVQDL 194 (202)
Q Consensus 170 ~~Ls~ee~eek~k~~~~r~eFVQgL 194 (202)
.-||++|++|+++ .|-+|++++
T Consensus 20 ~gLT~eEk~EQ~~---LR~eYl~~f 41 (60)
T 3bhp_A 20 GVITEEEKAEQQK---LRQEYLKGF 41 (60)
T ss_dssp TCCCHHHHHHHHH---HHHHHHHHH
T ss_pred cCCCHHHHHHHHH---HHHHHHHHH
Confidence 4699999988765 788888765
No 334
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=38.27 E-value=11 Score=35.46 Aligned_cols=22 Identities=9% Similarity=-0.082 Sum_probs=16.8
Q ss_pred cccccCCCCCceecCCCcccch
Q 028852 65 LEDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 65 ~~~eH~~e~~~vVCPVCa~~vs 86 (202)
|......+++.-|||||...||
T Consensus 25 ~~~~fg~~PNt~v~pv~lg~PG 46 (483)
T 3ip4_B 25 SPAHFGAEPNSNTNVIDLAYPG 46 (483)
T ss_dssp SBSSCCSSTTCSCCTTTTTCTT
T ss_pred CCCcCCCCCccCcCchhccCCC
Confidence 4444456788899999999974
No 335
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.44 E-value=14 Score=22.08 Aligned_cols=21 Identities=33% Similarity=0.496 Sum_probs=16.2
Q ss_pred cccCCC--CCC-CCCHHHhhhhcc
Q 028852 46 DFPCPY--CYE-DFDIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPf--C~e-~~dv~~L~~H~~ 66 (202)
-|.|++ |+. =.....|..|+.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r 32 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLK 32 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 499987 999 456777888854
No 336
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=37.39 E-value=4.3 Score=25.17 Aligned_cols=40 Identities=33% Similarity=0.655 Sum_probs=21.1
Q ss_pred cccCCCCCCCCCH-----HH-hhhhcccccCCC---CCceecCCCcccc
Q 028852 46 DFPCPYCYEDFDI-----AS-LCSHLEDEHSCE---SKVTVCPICSVKV 85 (202)
Q Consensus 46 ~F~CPfC~e~~dv-----~~-L~~H~~~eH~~e---~~~vVCPVCa~~v 85 (202)
.+.||.|.+.+.. .. -|.|.-=..... .....||+|...+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcC
Confidence 5779999886632 11 244432111110 1126799997654
No 337
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=36.93 E-value=15 Score=20.32 Aligned_cols=21 Identities=24% Similarity=0.523 Sum_probs=15.7
Q ss_pred cccCCC--CCCCC-CHHHhhhhcc
Q 028852 46 DFPCPY--CYEDF-DIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPf--C~e~~-dv~~L~~H~~ 66 (202)
.|.|++ |+..| ....|..|..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 599986 99955 5667888854
No 338
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=36.42 E-value=10 Score=33.72 Aligned_cols=42 Identities=24% Similarity=0.664 Sum_probs=26.5
Q ss_pred CCcccCCCCCC-CCCHHHh-hhhc-ccccCCCCCceecCCCcccch
Q 028852 44 RPDFPCPYCYE-DFDIASL-CSHL-EDEHSCESKVTVCPICSVKVA 86 (202)
Q Consensus 44 ~~~F~CPfC~e-~~dv~~L-~~H~-~~eH~~e~~~vVCPVCa~~vs 86 (202)
...+.||.|.+ -.+...| |.|. -=..+... ...||+|-..+.
T Consensus 293 ~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~-~~~CP~CR~~i~ 337 (345)
T 3t6p_A 293 QEERTCKVCMDKEVSVVFIPCGHLVVCQECAPS-LRKCPICRGIIK 337 (345)
T ss_dssp HTTCBCTTTSSSBCCEEEETTCCEEECTTTGGG-CSBCTTTCCBCC
T ss_pred cCCCCCCccCCcCCceEEcCCCChhHhHHHHhc-CCcCCCCCCCcc
Confidence 45699999988 4444443 6665 33333221 268999988764
No 339
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=35.87 E-value=12 Score=18.75 Aligned_cols=20 Identities=30% Similarity=0.610 Sum_probs=13.0
Q ss_pred ccCC--CCCCCC-CHHHhhhhcc
Q 028852 47 FPCP--YCYEDF-DIASLCSHLE 66 (202)
Q Consensus 47 F~CP--fC~e~~-dv~~L~~H~~ 66 (202)
|.|+ .|+..| ....|..|..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCcCCcCcCccCCHHHHHHHHH
Confidence 6777 888744 4566777754
No 340
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=35.56 E-value=17 Score=24.24 Aligned_cols=31 Identities=19% Similarity=0.532 Sum_probs=21.1
Q ss_pred CCCCCCcccCCCCCCCCCHHHhhhhcccccCCCCCceecC--CCcc
Q 028852 40 EDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCP--ICSV 83 (202)
Q Consensus 40 ~dd~~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCP--VCa~ 83 (202)
|..+.....||.|.-.+.... ...+|+ -|..
T Consensus 4 d~~lL~iL~CP~c~~~L~~~~-------------~~L~C~~~~c~~ 36 (56)
T 2kpi_A 4 EAGLLEILACPACHAPLEERD-------------AELICTGQDCGL 36 (56)
T ss_dssp CCSCTTSCCCSSSCSCEEEET-------------TEEEECSSSCCC
T ss_pred CHHHHhheeCCCCCCcceecC-------------CEEEcCCcCCCc
Confidence 346677999999977554322 567888 7743
No 341
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=34.11 E-value=21 Score=25.38 Aligned_cols=32 Identities=19% Similarity=0.472 Sum_probs=22.1
Q ss_pred cccCCC--CCCCCC-HHHhhhhcccccCCCCCceec
Q 028852 46 DFPCPY--CYEDFD-IASLCSHLEDEHSCESKVTVC 78 (202)
Q Consensus 46 ~F~CPf--C~e~~d-v~~L~~H~~~eH~~e~~~vVC 78 (202)
-|.|++ |+.-|. ...|..|+...|..+ ++.+|
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgE-KP~~~ 61 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSD-LPAFS 61 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSC-CCCCC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCC-CCccc
Confidence 499976 999554 567888976677753 33443
No 342
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=34.05 E-value=5.4 Score=29.53 Aligned_cols=37 Identities=22% Similarity=0.465 Sum_probs=21.6
Q ss_pred cCCCCCCCCCHH--------------------HhhhhcccccCCCC---CceecCCCccc
Q 028852 48 PCPYCYEDFDIA--------------------SLCSHLEDEHSCES---KVTVCPICSVK 84 (202)
Q Consensus 48 ~CPfC~e~~dv~--------------------~L~~H~~~eH~~e~---~~vVCPVCa~~ 84 (202)
.|+.|.+.|+.. .-|.|.--.|+... ....||+|...
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 488887766643 22555444444321 35679999775
No 343
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=33.86 E-value=16 Score=28.99 Aligned_cols=28 Identities=29% Similarity=0.791 Sum_probs=19.1
Q ss_pred CcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
..-+||-|+-++.- .+....|||-|+.-
T Consensus 26 ~lP~CP~C~seytY------------eDg~l~vCPeC~hE 53 (138)
T 2akl_A 26 TLPPCPQCNSEYTY------------EDGALLVCPECAHE 53 (138)
T ss_dssp CSCCCTTTCCCCCE------------ECSSSEEETTTTEE
T ss_pred cCCCCCCCCCcceE------------ecCCeEECCccccc
Confidence 35689999664431 24557899999863
No 344
>3kfu_F Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=33.74 E-value=14 Score=34.66 Aligned_cols=17 Identities=24% Similarity=0.595 Sum_probs=14.6
Q ss_pred CCCCCceecCCCcccch
Q 028852 70 SCESKVTVCPICSVKVA 86 (202)
Q Consensus 70 ~~e~~~vVCPVCa~~vs 86 (202)
..+++.-|||||..+||
T Consensus 30 g~~PNt~vcpvclglPG 46 (466)
T 3kfu_F 30 GAEPNTHTCPVCLGLPG 46 (466)
T ss_dssp SCCTTSSCCTTTTTCTT
T ss_pred CCCCCCccCccccCCCC
Confidence 56788899999999974
No 345
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.85 E-value=6.1 Score=27.22 Aligned_cols=11 Identities=27% Similarity=0.797 Sum_probs=8.3
Q ss_pred ceecCCCcccc
Q 028852 75 VTVCPICSVKV 85 (202)
Q Consensus 75 ~vVCPVCa~~v 85 (202)
...||+|...+
T Consensus 64 ~~~CP~CR~~~ 74 (81)
T 2ecl_A 64 NNRCPLCQQDW 74 (81)
T ss_dssp CCBCTTTCCBC
T ss_pred CCCCCCcCCCc
Confidence 35899998764
No 346
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=32.61 E-value=20 Score=19.61 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=14.9
Q ss_pred cccCCC--CCCC-CCHHHhhhhcc
Q 028852 46 DFPCPY--CYED-FDIASLCSHLE 66 (202)
Q Consensus 46 ~F~CPf--C~e~-~dv~~L~~H~~ 66 (202)
.|.|++ |+.. -....|..|..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~ 29 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKH 29 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHH
Confidence 488995 9984 45566778864
No 347
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=32.01 E-value=9.7 Score=28.88 Aligned_cols=37 Identities=22% Similarity=0.465 Sum_probs=0.0
Q ss_pred cCCCCCCCCCHH--------------------HhhhhcccccCCCC---CceecCCCccc
Q 028852 48 PCPYCYEDFDIA--------------------SLCSHLEDEHSCES---KVTVCPICSVK 84 (202)
Q Consensus 48 ~CPfC~e~~dv~--------------------~L~~H~~~eH~~e~---~~vVCPVCa~~ 84 (202)
.|+.|-+.|+.. .-|.|.--.|+... ....||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 688887776542 13677666666543 35689999764
No 348
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=31.17 E-value=5.9 Score=29.68 Aligned_cols=10 Identities=40% Similarity=0.916 Sum_probs=8.3
Q ss_pred CcccCCCCCC
Q 028852 45 PDFPCPYCYE 54 (202)
Q Consensus 45 ~~F~CPfC~e 54 (202)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 3699999976
No 349
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=31.15 E-value=27 Score=25.63 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=23.8
Q ss_pred CCCCceecCCCcccchhhhhhhhhhcccchhh
Q 028852 71 CESKVTVCPICSVKVARDMLSHITLQHGHLFK 102 (202)
Q Consensus 71 ~e~~~vVCPVCa~~vs~d~i~Hl~~~H~~~~k 102 (202)
.....+||.+|..... .+.+||+..||-..+
T Consensus 17 i~~d~iiClecGK~fK-~LkRHL~~~hgltpe 47 (87)
T 2jsp_A 17 VQDDHIVCLECGGSFK-SLKRHLTTHHSMTPE 47 (87)
T ss_dssp BCSSCEECTBTCCEES-BHHHHHHHTTCSCHH
T ss_pred cCCCceEecccchhhH-HHHHHHHHccCCCHH
Confidence 4556789999988655 477999999998554
No 350
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=30.72 E-value=9.6 Score=24.63 Aligned_cols=41 Identities=32% Similarity=0.531 Sum_probs=23.1
Q ss_pred cccCCCCCCCCCH---HHhhhhcccccCCC---CCceecCCCcccch
Q 028852 46 DFPCPYCYEDFDI---ASLCSHLEDEHSCE---SKVTVCPICSVKVA 86 (202)
Q Consensus 46 ~F~CPfC~e~~dv---~~L~~H~~~eH~~e---~~~vVCPVCa~~vs 86 (202)
...||.|.+.+.. ..-|.|.-=..+.. .....||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 5679999886543 22355542111111 12357999988764
No 351
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=29.90 E-value=17 Score=26.34 Aligned_cols=15 Identities=20% Similarity=0.425 Sum_probs=10.6
Q ss_pred CcccCCCCCCCCCHH
Q 028852 45 PDFPCPYCYEDFDIA 59 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~ 59 (202)
....||||+.-|-..
T Consensus 52 g~~~CpYCg~~f~l~ 66 (80)
T 2jvm_A 52 GFVECGYCDRRYIHE 66 (80)
T ss_dssp CEEECSSSSCEEEEH
T ss_pred CeEECCCCCCEEEec
Confidence 368899999844333
No 352
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=29.54 E-value=16 Score=37.10 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=22.9
Q ss_pred CCcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
-..|.||.|+..|...+= ..-.|.+-.+.||.|.-.
T Consensus 265 s~~~~cp~~g~~~~~~~p-----~~FSfN~p~GaCp~C~G~ 300 (972)
T 2r6f_A 265 SEKHACPYCGFSIGELEP-----RLFSFNSPFGACPDCDGL 300 (972)
T ss_dssp ESSEECTTTCCEEECCCG-----GGGCSSSTTTBCTTTTSC
T ss_pred eccccCCCCCCcCCCCCh-----hhcCcCCCCCCCCCCcCc
Confidence 357999999975542211 112345556999999854
No 353
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=29.05 E-value=29 Score=26.31 Aligned_cols=28 Identities=21% Similarity=0.401 Sum_probs=20.4
Q ss_pred CcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
..|.|--||..|. .--.+++.||.|...
T Consensus 66 ~p~~C~~CG~~F~------------~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 66 KPAQCRKCGFVFK------------AEINIPSRCPKCKSE 93 (105)
T ss_dssp CCCBBTTTCCBCC------------CCSSCCSSCSSSCCC
T ss_pred ECcChhhCcCeec------------ccCCCCCCCcCCCCC
Confidence 4689999999881 122467899999763
No 354
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=28.91 E-value=32 Score=24.93 Aligned_cols=11 Identities=18% Similarity=0.655 Sum_probs=8.1
Q ss_pred CceecCCCccc
Q 028852 74 KVTVCPICSVK 84 (202)
Q Consensus 74 ~~vVCPVCa~~ 84 (202)
..-+||.|..+
T Consensus 66 ~~w~C~~C~~~ 76 (98)
T 2lv9_A 66 DTYLCERCQPR 76 (98)
T ss_dssp SSBCCTTTSSS
T ss_pred CCEECCCCcCC
Confidence 35789999754
No 355
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=28.64 E-value=27 Score=23.82 Aligned_cols=10 Identities=30% Similarity=0.720 Sum_probs=4.6
Q ss_pred ceecCCCccc
Q 028852 75 VTVCPICSVK 84 (202)
Q Consensus 75 ~vVCPVCa~~ 84 (202)
++-||-|-..
T Consensus 28 ~gqCPYC~~~ 37 (57)
T 2k9h_A 28 NGQCPYCMTI 37 (57)
T ss_dssp TTBCTTTCCB
T ss_pred CCCCCcccCc
Confidence 3445555443
No 356
>2jvd_A UPF0291 protein YNZC; solution structure, construct optimization, cytoplasm, structural genomics, unknown function, PSI-2; NMR {Bacillus subtilis}
Probab=28.18 E-value=21 Score=24.10 Aligned_cols=22 Identities=14% Similarity=0.400 Sum_probs=17.0
Q ss_pred CCCCHHHHHHHHhcccchhhhHHHH
Q 028852 170 PSLSHEEREKRIRQGAGRASFVQDL 194 (202)
Q Consensus 170 ~~Ls~ee~eek~k~~~~r~eFVQgL 194 (202)
.-||++|++|+++ .|-+|++.+
T Consensus 20 ~gLT~eEk~EQ~~---LR~eYl~~f 41 (54)
T 2jvd_A 20 GVITEEEKAEQQK---LRQEYLKGF 41 (54)
T ss_dssp TCCCHHHHHHHHH---HHHHHHTTC
T ss_pred cCCCHHHHHHHHH---HHHHHHHHH
Confidence 4699999988765 788887653
No 357
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=28.06 E-value=10 Score=28.72 Aligned_cols=53 Identities=25% Similarity=0.417 Sum_probs=32.2
Q ss_pred ccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc-------hhhhhhhhhhcccchhhh
Q 028852 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV-------ARDMLSHITLQHGHLFKL 103 (202)
Q Consensus 47 F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v-------s~d~i~Hl~~~H~~~~k~ 103 (202)
-.||-|...++..+=.-||..=+..=...+.||-|...+ ..|+.- +|++.++.
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC----~~chgLiS 92 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFC----QHGHGLIS 92 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEE----TTTTEEEC
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchhh----ccCCceee
Confidence 689999877665443333333333334568899998875 245542 56666654
No 358
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=28.00 E-value=23 Score=30.87 Aligned_cols=41 Identities=15% Similarity=0.460 Sum_probs=27.4
Q ss_pred CCCCcccCCCCCCCC-CHHHhhhhcccccCCCCCceecCCCcccchhhhhh
Q 028852 42 DVRPDFPCPYCYEDF-DIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91 (202)
Q Consensus 42 d~~~~F~CPfC~e~~-dv~~L~~H~~~eH~~e~~~vVCPVCa~~vs~d~i~ 91 (202)
|+.....||.|+..- + +..+ +.....||.-|...+..+.+.
T Consensus 17 ~~~~~~~Cp~Cg~~~~~-------iv~D--~~~G~~vC~~CG~Vl~e~~id 58 (345)
T 3k7a_M 17 NLNIVLTCPECKVYPPK-------IVER--FSEGDVVCALCGLVLSDKLVD 58 (345)
T ss_dssp CCCCCCCCSTTCCSCCC-------CCCC--SSSCSCCCSSSCCCCCCCCCC
T ss_pred cccCCCcCcCCCCCCCc-------eEEE--CCCCCEecCCCCeEccccccc
Confidence 555677899998731 1 1222 346688999999988665544
No 359
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=27.41 E-value=27 Score=35.48 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=22.3
Q ss_pred CcccCCCCC-CCCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 45 PDFPCPYCY-EDFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 45 ~~F~CPfC~-e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
..|.||.|+ ..|...+= ..-.|.+-.+.||.|.-.
T Consensus 274 ~~~~c~~~g~~~~~~~~p-----~~FSfN~p~GaCp~C~G~ 309 (993)
T 2ygr_A 274 EKLACPNGHALAVDDLEP-----RSFSFNSPYGACPDCSGL 309 (993)
T ss_dssp SSCBCTTCCCCSCSCCCG-----GGGCTTSTTTBCTTTTTS
T ss_pred ccccCCCCCCcccCCCCh-----hhcCcCCCCCCCCCCcCc
Confidence 569999999 55543211 112345566999999853
No 360
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=27.32 E-value=17 Score=25.41 Aligned_cols=12 Identities=33% Similarity=0.861 Sum_probs=8.8
Q ss_pred CcccCCCCCCCC
Q 028852 45 PDFPCPYCYEDF 56 (202)
Q Consensus 45 ~~F~CPfC~e~~ 56 (202)
....||||+.-|
T Consensus 39 g~~~CpYCg~~f 50 (67)
T 2jrr_A 39 GWVECPYCDCKY 50 (67)
T ss_dssp SEEEETTTTEEE
T ss_pred CeEECCCCCCEE
Confidence 367899998733
No 361
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=26.31 E-value=19 Score=32.22 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=18.8
Q ss_pred CcccCCCCCCCCCHHHhhhhcccccCCCCCceecCCC-cccchhh
Q 028852 45 PDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPIC-SVKVARD 88 (202)
Q Consensus 45 ~~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVC-a~~vs~d 88 (202)
+...|||||-.+.. +-+.-+|||| .+.||.+
T Consensus 286 ~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~ 317 (325)
T 3mv2_A 286 PSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAP 317 (325)
T ss_dssp CEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCC
T ss_pred CCccCCCCCCeech-------------hhCCCCCCCCcCcccCCC
Confidence 34679999863321 2245689999 4445544
No 362
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=26.14 E-value=21 Score=26.91 Aligned_cols=23 Identities=26% Similarity=0.515 Sum_probs=16.4
Q ss_pred CCcccCCCCCCCCCHHHhhhhcc
Q 028852 44 RPDFPCPYCYEDFDIASLCSHLE 66 (202)
Q Consensus 44 ~~~F~CPfC~e~~dv~~L~~H~~ 66 (202)
...|.||.|+..+-..-..-|++
T Consensus 68 s~~~~C~nC~R~vaa~RFApHLe 90 (99)
T 3mhs_C 68 SQYIHCENCGRDVSANRLAAHLQ 90 (99)
T ss_dssp SCEEECTTTCCEEEGGGHHHHHH
T ss_pred CCeEECCCCCCCchhhhhHHHHH
Confidence 45788888887777776666654
No 363
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=26.05 E-value=42 Score=25.23 Aligned_cols=47 Identities=26% Similarity=0.516 Sum_probs=24.2
Q ss_pred cccCCCCCCCCCHHHhhhhcccccCCCCCceecCC---Cccc-c-hhhhhhhhhhcccch
Q 028852 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPI---CSVK-V-ARDMLSHITLQHGHL 100 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPV---Ca~~-v-s~d~i~Hl~~~H~~~ 100 (202)
.-.||.|.+.+...+. |.. ...-+|++ |-.. + -+||..||+++|...
T Consensus 37 ~k~Cp~C~~~V~rVe~-------~~~-~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~ 88 (101)
T 3vk6_A 37 DKMCPGCSDPVQRIEQ-------CTR-GSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRA 88 (101)
T ss_dssp CCBCTTTCCBCSEEEE-------EEG-GGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTS
T ss_pred CCCCcCcCCeeeeeEE-------ecc-CCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhc
Confidence 3467777664443322 122 23445662 4322 2 457777777777654
No 364
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.83 E-value=17 Score=24.41 Aligned_cols=44 Identities=23% Similarity=0.581 Sum_probs=24.4
Q ss_pred CCCcccCCCCCCCC-CHHHh-hhhc-ccccCCCCCceecCCCcccchh
Q 028852 43 VRPDFPCPYCYEDF-DIASL-CSHL-EDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 43 ~~~~F~CPfC~e~~-dv~~L-~~H~-~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
+...+.||.|.+.+ +...| |.|. -=..+. .+...||+|...+..
T Consensus 22 ~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~-~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 22 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA-EAVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHH-HHCSBCTTTCCBCCC
T ss_pred CCCCCCCCcCCCCCCCEEEecCCCHHHHHHHh-hCCCCCccCCceecC
Confidence 34578999998844 33321 3343 111111 123689999887643
No 365
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=25.83 E-value=15 Score=25.25 Aligned_cols=42 Identities=24% Similarity=0.615 Sum_probs=25.2
Q ss_pred CcccCCCCCC-CCCHHHh-hhhc-ccccCCCCCceecCCCcccchh
Q 028852 45 PDFPCPYCYE-DFDIASL-CSHL-EDEHSCESKVTVCPICSVKVAR 87 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L-~~H~-~~eH~~e~~~vVCPVCa~~vs~ 87 (202)
....||.|.+ ..+..-| |.|. -=..+.. +...||+|...+..
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCGHTVCCESCAA-QLQSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTCBCCBCHHHHT-TCSBCTTTCCBCCE
T ss_pred CCCEeEEeCcccCcEEEECCCCHHHHHHHHH-hcCcCCCCCchhhC
Confidence 4568999988 5555444 5554 1122222 12389999987654
No 366
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=25.53 E-value=6.9 Score=23.74 Aligned_cols=9 Identities=44% Similarity=0.988 Sum_probs=7.5
Q ss_pred eecCCCccc
Q 028852 76 TVCPICSVK 84 (202)
Q Consensus 76 vVCPVCa~~ 84 (202)
-+||+|.+.
T Consensus 17 ~~CP~CtA~ 25 (32)
T 2bai_A 17 EECPKCSAL 25 (32)
T ss_dssp GGHHHHHCS
T ss_pred cccccccee
Confidence 689999875
No 367
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=24.78 E-value=24 Score=26.83 Aligned_cols=19 Identities=21% Similarity=0.273 Sum_probs=12.6
Q ss_pred CcccCCCCCC-CCCHHHhhh
Q 028852 45 PDFPCPYCYE-DFDIASLCS 63 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~ 63 (202)
..|.||||.. .=.+..|..
T Consensus 30 ~d~~Cp~C~~~~~~l~~l~~ 49 (195)
T 2znm_A 30 FGYFCVHCHHFDPLLLKLGK 49 (195)
T ss_dssp ECTTSCCTTSSCHHHHHHHH
T ss_pred ECCCChhHHHHhHHHHHHHH
Confidence 3699999988 444444443
No 368
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=24.45 E-value=5.2 Score=26.42 Aligned_cols=42 Identities=26% Similarity=0.454 Sum_probs=23.0
Q ss_pred CcccCCCCCCC-CCHHHh---hhhcc-cccC---CCCCceecCCCcccch
Q 028852 45 PDFPCPYCYED-FDIASL---CSHLE-DEHS---CESKVTVCPICSVKVA 86 (202)
Q Consensus 45 ~~F~CPfC~e~-~dv~~L---~~H~~-~eH~---~e~~~vVCPVCa~~vs 86 (202)
....|+.|.+. -|..-+ |.|.- =.-. .......||||...+.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 35689999884 444333 55531 0101 0112358999988763
No 369
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=23.80 E-value=14 Score=29.49 Aligned_cols=12 Identities=33% Similarity=1.024 Sum_probs=9.5
Q ss_pred ccCCCCCCCCCH
Q 028852 47 FPCPYCYEDFDI 58 (202)
Q Consensus 47 F~CPfC~e~~dv 58 (202)
|.||+|..++..
T Consensus 3 ~~Cp~C~~~~~~ 14 (269)
T 1p91_A 3 FSCPLCHQPLSR 14 (269)
T ss_dssp BBCTTTCCBCEE
T ss_pred ccCCCCCcccee
Confidence 889999886644
No 370
>2hep_A UPF0291 protein YNZC; SR384, structure, autostructure, northeast structural genomics consortium, PSI-1, protein structure initiative, NESG; NMR {Bacillus subtilis} SCOP: a.2.21.1
Probab=23.56 E-value=39 Score=24.68 Aligned_cols=22 Identities=14% Similarity=0.400 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHHhcccchhhhHHHH
Q 028852 170 PSLSHEEREKRIRQGAGRASFVQDL 194 (202)
Q Consensus 170 ~~Ls~ee~eek~k~~~~r~eFVQgL 194 (202)
.-||++|++|+++ .|-+|++.+
T Consensus 20 ~GLT~eEk~EQ~~---LR~eYl~~f 41 (85)
T 2hep_A 20 GVITEEEKAEQQK---LRQEYLKGF 41 (85)
T ss_dssp HCCCHHHHHHHHH---HHHHHHHHC
T ss_pred cCCCHHHHHHHHH---HHHHHHHHH
Confidence 4699999988765 688887753
No 371
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=23.27 E-value=23 Score=25.50 Aligned_cols=11 Identities=55% Similarity=1.111 Sum_probs=8.5
Q ss_pred CceecCCCccc
Q 028852 74 KVTVCPICSVK 84 (202)
Q Consensus 74 ~~vVCPVCa~~ 84 (202)
...|||||...
T Consensus 16 ~tWVCpICsfs 26 (76)
T 2j9u_B 16 STWVCPICMVS 26 (76)
T ss_dssp EEEECTTTCCE
T ss_pred cceECcccccc
Confidence 35799999854
No 372
>3alr_A Nanos protein; zinc-finger, translational repression, RNA, 3'-UTR, metal BI protein; 2.10A {Danio rerio}
Probab=23.15 E-value=14 Score=28.14 Aligned_cols=40 Identities=20% Similarity=0.385 Sum_probs=21.4
Q ss_pred CcccCCCCCC-CCCHHHhhhhcccccCC-----CCCceecCCCccc
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLEDEHSC-----ESKVTVCPICSVK 84 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~eH~~-----e~~~vVCPVCa~~ 84 (202)
....|-||-. +-...-...|...+-.. --+..+||||.+.
T Consensus 35 ~~~~C~FCrnNGE~~~vy~SH~LKd~~G~V~CPvLR~Y~CpiCGAT 80 (106)
T 3alr_A 35 ERKFCSFCKHNGETEAVYTSHYLKNRDGDVMCPYLRQYKCPLCGAT 80 (106)
T ss_dssp ---CCHHHHHTTCCHHHHTSBCSBCTTSCBCCTTGGGCCCTTTCCC
T ss_pred CCCEeECCCCCCcccCccccceeECCCCCCcCCCcccccCCCCCCc
Confidence 4578999966 55555566676554211 1123556778775
No 373
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=22.55 E-value=20 Score=31.48 Aligned_cols=11 Identities=27% Similarity=0.625 Sum_probs=6.3
Q ss_pred CCcccCCCCCC
Q 028852 44 RPDFPCPYCYE 54 (202)
Q Consensus 44 ~~~F~CPfC~e 54 (202)
+..=.||.||-
T Consensus 180 ~~~~~CPvCGs 190 (309)
T 2fiy_A 180 ESRTLCPACGS 190 (309)
T ss_dssp TTCSSCTTTCC
T ss_pred ccCCCCCCCCC
Confidence 34456666655
No 374
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=22.24 E-value=26 Score=25.80 Aligned_cols=14 Identities=29% Similarity=0.776 Sum_probs=10.5
Q ss_pred CcccCCCCCCCCCH
Q 028852 45 PDFPCPYCYEDFDI 58 (202)
Q Consensus 45 ~~F~CPfC~e~~dv 58 (202)
..-.||||+.-|-.
T Consensus 47 g~~~CpYCg~~y~~ 60 (87)
T 2jz8_A 47 DEKICPYCSTLYRY 60 (87)
T ss_dssp CEECCTTTCCEEEC
T ss_pred CeEECCCCCCEeEc
Confidence 46899999985543
No 375
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=21.70 E-value=40 Score=19.68 Aligned_cols=22 Identities=27% Similarity=0.400 Sum_probs=9.9
Q ss_pred CceecC--CCcccc--hhhhhhhhhh
Q 028852 74 KVTVCP--ICSVKV--ARDMLSHITL 95 (202)
Q Consensus 74 ~~vVCP--VCa~~v--s~d~i~Hl~~ 95 (202)
++..|+ +|.... ..+|..|+..
T Consensus 17 k~~~C~~~~C~k~F~~~~~L~~H~~~ 42 (47)
T 1ncs_A 17 KTFECLFPGCTKTFKRRYNIRSHIQT 42 (47)
T ss_dssp TEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred CCeECCCCCCCCccCCHHHHHHHHHH
Confidence 344552 454442 3345555443
No 376
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=21.69 E-value=19 Score=31.21 Aligned_cols=10 Identities=20% Similarity=0.497 Sum_probs=0.0
Q ss_pred ceecCCCccc
Q 028852 75 VTVCPICSVK 84 (202)
Q Consensus 75 ~vVCPVCa~~ 84 (202)
.++|.-|...
T Consensus 260 ev~C~FC~~~ 269 (292)
T 1i7f_A 260 DMHCDYCGNH 269 (292)
T ss_dssp ----------
T ss_pred EEEeeCCCCE
Confidence 4555555543
No 377
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=21.05 E-value=12 Score=29.52 Aligned_cols=21 Identities=19% Similarity=0.456 Sum_probs=14.9
Q ss_pred CCcccCCCCCC-CCCHHHhhhh
Q 028852 44 RPDFPCPYCYE-DFDIASLCSH 64 (202)
Q Consensus 44 ~~~F~CPfC~e-~~dv~~L~~H 64 (202)
-..|.||||.. .-.+..+...
T Consensus 21 f~D~~Cp~C~~~~~~~~~~l~~ 42 (182)
T 3gn3_A 21 FLEPTCPFSVKAFFKLDDLLAQ 42 (182)
T ss_dssp EECTTCHHHHHHHTTHHHHHHH
T ss_pred EECCCCHhHHHHHHHHHHHHHH
Confidence 34799999987 5566666544
No 378
>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D*
Probab=20.72 E-value=17 Score=27.24 Aligned_cols=7 Identities=43% Similarity=1.213 Sum_probs=3.8
Q ss_pred ccCCCCC
Q 028852 47 FPCPYCY 53 (202)
Q Consensus 47 F~CPfC~ 53 (202)
.+||+||
T Consensus 4 I~CP~CG 10 (99)
T 2gag_D 4 IDCPNCG 10 (99)
T ss_dssp EEETTTE
T ss_pred ecCCCCC
Confidence 3455555
No 379
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=20.57 E-value=25 Score=22.85 Aligned_cols=37 Identities=14% Similarity=0.288 Sum_probs=18.6
Q ss_pred cccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 46 DFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 46 ~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
.++||-|+. ..-...+ ......-......+|+-|...
T Consensus 15 ~~~Cp~Cg~~~~~~~q~--Q~rsadep~T~fy~C~~Cg~~ 52 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEM--QTRAGDEPSTIFYKCTKCGHT 52 (57)
T ss_dssp ECCCTTTCCSEEEEEEE--CCSSSSCSSEEEEEESSSCCE
T ss_pred EeECCCCCCCEEEEEEe--ecccCCCCCcEEEEcCCCCCE
Confidence 689999987 2211111 111111122345789988653
No 380
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=20.48 E-value=28 Score=35.60 Aligned_cols=50 Identities=22% Similarity=0.484 Sum_probs=30.5
Q ss_pred ccccc-cCCCcCCCCCCCCCcccCCCCCC-CCCHHHhhhhcccccCCCCCceecCCCccc
Q 028852 27 SQIDR-LSIDDFEVEDDVRPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSVK 84 (202)
Q Consensus 27 s~~~~-~~~~~~~~~dd~~~~F~CPfC~e-~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~ 84 (202)
|-... +||-|+++ +++-|.||-|.- +|.-.+-. .=-++--...||.|...
T Consensus 485 SlVAy~LgITeVDP---l~phy~c~~c~~~ef~~~~~~-----~~g~dlp~k~cp~cg~~ 536 (1041)
T 3f2b_A 485 SFVATMTEITEVNP---LPPHYVCPNCKHSEFFNDGSV-----GSGFDLPDKNCPRCGTK 536 (1041)
T ss_dssp CHHHHHTTSCSCCC---SCSEEECTTTCCEEECCSSCC-----SCGGGSCCCBCTTTCCB
T ss_pred HHHHHHhcCCCcCC---CcccccCcccccccccccccc-----ccccCCccccCcccccc
Confidence 33344 68888776 678899999966 65421100 00123345689999775
No 381
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=20.43 E-value=37 Score=30.87 Aligned_cols=23 Identities=17% Similarity=0.586 Sum_probs=20.1
Q ss_pred CcccCCCCCC-CCCHHHhhhhccc
Q 028852 45 PDFPCPYCYE-DFDIASLCSHLED 67 (202)
Q Consensus 45 ~~F~CPfC~e-~~dv~~L~~H~~~ 67 (202)
....||-||. .||+.++..-+++
T Consensus 270 ~~ISCPtCGRt~~dl~~~~~~ie~ 293 (366)
T 3noy_A 270 EIVACPTCGRIEVDLPKVVKEVQE 293 (366)
T ss_dssp EEEECCCCTTCCSCHHHHHHHHHH
T ss_pred EEEECCCCCCccccHHHHHHHHHH
Confidence 4689999999 9999999887774
No 382
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=20.35 E-value=42 Score=21.90 Aligned_cols=13 Identities=23% Similarity=0.467 Sum_probs=8.6
Q ss_pred CcccCCCCCCCCC
Q 028852 45 PDFPCPYCYEDFD 57 (202)
Q Consensus 45 ~~F~CPfC~e~~d 57 (202)
....|++||+.+-
T Consensus 17 ~~~~C~~CG~~i~ 29 (49)
T 2l8e_A 17 NLLKCEYCGKYAP 29 (49)
T ss_dssp SEEECTTTCCEEE
T ss_pred CCCcChhccCccc
Confidence 3456888888443
No 383
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=20.25 E-value=58 Score=22.75 Aligned_cols=29 Identities=31% Similarity=0.679 Sum_probs=19.8
Q ss_pred ccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCcccc
Q 028852 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKV 85 (202)
Q Consensus 47 F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa~~v 85 (202)
..||-|+. ++-...| ....|.|.+|...+
T Consensus 8 VKCp~C~n---iq~VFSh-------A~tvV~C~~Cg~~L 36 (66)
T 1qxf_A 8 VKCPDCEH---EQVIFDH-------PSTIVKCIICGRTV 36 (66)
T ss_dssp EECTTTCC---EEEEESS-------CSSCEECSSSCCEE
T ss_pred EECCCCCC---ceEEEec-------CceEEEcccCCCEE
Confidence 57999976 2223333 35689999999875
No 384
>1k3x_A Endonuclease VIII; hydrolase/DNA, hydrolase-DNA complex; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=20.03 E-value=21 Score=30.27 Aligned_cols=28 Identities=25% Similarity=0.548 Sum_probs=17.5
Q ss_pred cccCCCCCCCCCHHHhhhhcccccCCCCCceecCCCc
Q 028852 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICS 82 (202)
Q Consensus 46 ~F~CPfC~e~~dv~~L~~H~~~eH~~e~~~vVCPVCa 82 (202)
--+||-||..+....+ .......||.|-
T Consensus 234 g~pC~~CG~~I~~~~~---------~gR~t~~CP~CQ 261 (262)
T 1k3x_A 234 GEPCERCGSIIEKTTL---------SSRPFYWCPGCQ 261 (262)
T ss_dssp TSBCTTTCCBCEEEEE---------TTEEEEECTTTC
T ss_pred cCCCCCCCCEeEEEEE---------CCCCeEECCCCC
Confidence 3479999875433222 245667888883
Done!