BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028857
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5C8|MSRB2_ARATH Peptide methionine sulfoxide reductase B2, chloroplastic
OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1
Length = 202
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
Query: 105 KRSFRGGVVLAV-ASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGI 163
+R F GG ++A+ +S P SVNK EEEWRAILSPEQFRILRQK TEYPGTGEY+K F++GI
Sbjct: 54 RRGFHGGRIVAMGSSAPESVNKPEEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGI 113
Query: 164 YNCSACGTPLYKSTTKFNSGCGWPAFYEGLPGAI 197
Y C+ CGTPLYKSTTKF+SGCGWPAF++GLPGAI
Sbjct: 114 YCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAI 147
>sp|Q9ZS91|MSRB5_ARATH Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana
GN=MSRB5 PE=2 SV=1
Length = 139
Score = 147 bits (371), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 73/83 (87%)
Query: 116 VASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYK 175
+A+ P V K+EEEWRA+LSPEQFRILRQK TE PGTGEYDK FEEGI++C C TPLYK
Sbjct: 1 MAASPLVVQKTEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYK 60
Query: 176 STTKFNSGCGWPAFYEGLPGAIN 198
STTKF+SGCGWPAF+EGLPGAIN
Sbjct: 61 STTKFDSGCGWPAFFEGLPGAIN 83
>sp|Q6AUK5|MSRB3_ORYSJ Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza
sativa subsp. japonica GN=MSRB3 PE=2 SV=1
Length = 229
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 66/75 (88%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KSEEEW AILSPEQFRILR K TEYPGTGEYDK F EG+Y C+ CGTPLYKS+TKFNS
Sbjct: 98 VQKSEEEWEAILSPEQFRILRLKGTEYPGTGEYDKLFAEGVYECAGCGTPLYKSSTKFNS 157
Query: 183 GCGWPAFYEGLPGAI 197
GCGWPAFYEG PGAI
Sbjct: 158 GCGWPAFYEGFPGAI 172
>sp|Q9M0Z5|MSRB4_ARATH Peptide methionine sulfoxide reductase B4 OS=Arabidopsis thaliana
GN=MSRB4 PE=2 SV=1
Length = 139
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 61/76 (80%), Positives = 68/76 (89%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V K+EEEWRA+LSPEQFRILRQK TE PGT EYDK FEEGI++C C TPLYKSTTKF++
Sbjct: 8 VKKTEEEWRAVLSPEQFRILRQKGTETPGTEEYDKFFEEGIFSCIGCKTPLYKSTTKFDA 67
Query: 183 GCGWPAFYEGLPGAIN 198
GCGWPAF+EGLPGAIN
Sbjct: 68 GCGWPAFFEGLPGAIN 83
>sp|Q9M0Z6|MSRB3_ARATH Peptide methionine sulfoxide reductase B3 OS=Arabidopsis thaliana
GN=MSRB3 PE=2 SV=2
Length = 176
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 102 EQNKRSFRGGVVLAVA-SGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFE 160
E + GV VA + P SV K +EEWRAILSPEQFRILRQK TEYPGTGEY +
Sbjct: 25 ESDSICLSSGVASTVAMAAPGSVQKGDEEWRAILSPEQFRILRQKGTEYPGTGEYVNFDK 84
Query: 161 EGIYNCSACGTPLYKSTTKFNSGCGWPAFYEGLPGAI 197
EG+Y C C PLYKSTTKFN+GCGWPAF+EG+PGAI
Sbjct: 85 EGVYGCVGCNAPLYKSTTKFNAGCGWPAFFEGIPGAI 121
>sp|Q10L32|MSRB5_ORYSJ Peptide methionine sulfoxide reductase B5 OS=Oryza sativa subsp.
japonica GN=MSRB5 PE=2 SV=1
Length = 136
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 72/85 (84%)
Query: 114 LAVASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPL 173
+A + + +S+EEWRA+LSPEQFRILR K TE PGTGEY+K + +G+YNC+ CGTPL
Sbjct: 1 MASSGDSSGKQRSDEEWRAVLSPEQFRILRLKGTELPGTGEYNKFYGDGVYNCAGCGTPL 60
Query: 174 YKSTTKFNSGCGWPAFYEGLPGAIN 198
YKSTTKF+SGCGWPAF+EGLPGAIN
Sbjct: 61 YKSTTKFDSGCGWPAFFEGLPGAIN 85
>sp|Q84JT6|MSRB9_ARATH Peptide methionine sulfoxide reductase B9 OS=Arabidopsis thaliana
GN=MSRB9 PE=2 SV=1
Length = 143
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 68/84 (80%)
Query: 115 AVASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLY 174
AVA SV K +++WRAILSPEQFR+LR+K TE G GEY K F++GIY+C+ C TPLY
Sbjct: 7 AVAPSTGSVQKKDQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLY 66
Query: 175 KSTTKFNSGCGWPAFYEGLPGAIN 198
KSTTKF+SGCGWP+F++ +PGAI
Sbjct: 67 KSTTKFDSGCGWPSFFDAIPGAIK 90
>sp|Q8GWF4|MSRB6_ARATH Peptide methionine sulfoxide reductase B6 OS=Arabidopsis thaliana
GN=MSRB6 PE=2 SV=1
Length = 153
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 63/76 (82%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ KS EEWR +LSPEQF+ILR+K+ E G+GEY K FEEGIY C CG P+YKSTTKF+S
Sbjct: 24 IKKSNEEWRTVLSPEQFKILREKSIEKRGSGEYVKLFEEGIYCCVGCGNPVYKSTTKFDS 83
Query: 183 GCGWPAFYEGLPGAIN 198
GCGWPAF++ +PGAIN
Sbjct: 84 GCGWPAFFDAIPGAIN 99
>sp|O49707|MSRB8_ARATH Peptide methionine sulfoxide reductase B8 OS=Arabidopsis thaliana
GN=MSRB8 PE=2 SV=1
Length = 143
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 64/87 (73%)
Query: 112 VVLAVASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGT 171
+ A S K +EEWRA+LSPEQFR+LR K T+ G GE+ K FEEG Y+C+ CGT
Sbjct: 3 MTAAAVPSSGSFQKQDEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGT 62
Query: 172 PLYKSTTKFNSGCGWPAFYEGLPGAIN 198
LYKSTTKF+SGCGWPAF++ +PGAI
Sbjct: 63 ALYKSTTKFDSGCGWPAFFDAIPGAIK 89
>sp|Q8VY86|MSRB7_ARATH Peptide methionine sulfoxide reductase B7 OS=Arabidopsis thaliana
GN=MSRB7 PE=2 SV=1
Length = 144
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 62/78 (79%)
Query: 121 ASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKF 180
S K +EEWRA+LSPEQFR+LR K T+ G GE+ K FEEG Y+C+ CGT LYKSTTKF
Sbjct: 13 GSFQKQDEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKF 72
Query: 181 NSGCGWPAFYEGLPGAIN 198
+SGCGWPAF++ +PGAI
Sbjct: 73 DSGCGWPAFFDAIPGAIK 90
>sp|Q9Y7K1|YGL4_SCHPO Uncharacterized protein C216.04c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC216.04c PE=3 SV=1
Length = 138
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHF-EEGIYNCSACGTPLYKSTTKFN 181
+ KSE+EW+ L PE++RI+RQK TE+PG G + F ++G++ C+AC LYK++TKF
Sbjct: 5 LEKSEDEWKKELGPEKYRIMRQKGTEHPGAGRFTHQFPKQGVFVCAACKELLYKASTKFE 64
Query: 182 SGCGWPAFYEGLPGAI 197
S CGWPAF++ LPG +
Sbjct: 65 SHCGWPAFFDNLPGKV 80
>sp|A2SGN7|MSRB_METPP Peptide methionine sulfoxide reductase MsrB OS=Methylibium
petroleiphilum (strain PM1) GN=msrB PE=3 SV=1
Length = 138
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 120 PASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTK 179
P V K+E EWRA L P QF + R ATE TG+Y H++EG+Y+C C PL+ S TK
Sbjct: 8 PRKVQKTEAEWRAQLDPMQFEVTRHGATERAFTGKYADHWQEGVYHCVGCNAPLFDSGTK 67
Query: 180 FNSGCGWPAFYEGLPGAI 197
F++GCGWP++++ L G I
Sbjct: 68 FDAGCGWPSYFQPLRGEI 85
>sp|Q6ADJ8|MSRB_LEIXX Peptide methionine sulfoxide reductase MsrB OS=Leifsonia xyli
subsp. xyli (strain CTCB07) GN=msrB PE=3 SV=1
Length = 139
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 114 LAVASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPL 173
+ G + KS+EEWR L+PEQ+ +LRQ TE P TGE G+Y C+ACG L
Sbjct: 1 MDAGKGEYQIAKSDEEWRRELTPEQYGVLRQAGTEQPWTGELLDESRAGVYACAACGAEL 60
Query: 174 YKSTTKFNSGCGWPAFYEGL-PGAIN 198
++S TKF+SGCGWP+FYE + P A+
Sbjct: 61 FRSGTKFDSGCGWPSFYESVRPEAVE 86
>sp|Q3SJU1|MSRB_THIDA Peptide methionine sulfoxide reductase MsrB OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=msrB PE=3 SV=1
Length = 132
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 125 KSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGC 184
K++ +WRA LSPEQ+RILR++ TE TGEY H G Y C+ACG PL+ S+ KF+SG
Sbjct: 7 KTDAQWRAELSPEQYRILREQGTERAFTGEYWDHHANGEYRCAACGAPLFSSSAKFDSGT 66
Query: 185 GWPAFYEGL 193
GWP+FYE L
Sbjct: 67 GWPSFYEAL 75
>sp|Q8UGX7|MSRB_AGRT5 Peptide methionine sulfoxide reductase MsrB OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=msrB PE=3 SV=1
Length = 135
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
VNKS+ +WR L+PEQ+ ILR+ TE P TG Y E+G+Y C+AC PL+ S TKF++
Sbjct: 9 VNKSDADWREQLTPEQYHILREHGTERPFTGPYWNSTEKGLYRCAACDEPLFLSDTKFDA 68
Query: 183 GCGWPAFYEGL-PGAI 197
GCGWP+++E + PGA+
Sbjct: 69 GCGWPSYFEPVKPGAV 84
>sp|Q4ZQC6|MSRB_PSEU2 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=msrB PE=3 SV=1
Length = 131
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEW+ +L PEQ+ + R K TE P +G+YDK +GIY+C C PL+ STTKF+S
Sbjct: 4 LQKTLEEWKQMLDPEQYNVCRLKGTERPFSGKYDKVKTDGIYHCICCDEPLFDSTTKFDS 63
Query: 183 GCGWPAFYEGL 193
GCGWP+FY L
Sbjct: 64 GCGWPSFYAPL 74
>sp|Q1QXV3|MSRB_CHRSD Peptide methionine sulfoxide reductase MsrB OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=msrB PE=3 SV=1
Length = 133
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KSE EW+ L+PEQ+R+ R+K TE P TG+Y E+GIY+C CG PL+++ KF++
Sbjct: 5 VQKSEHEWQQQLTPEQYRVTREKGTERPFTGDYQVSDEQGIYHCVCCGAPLFENEHKFDA 64
Query: 183 GCGWPAFYEGLPGA 196
GCGWP+F L A
Sbjct: 65 GCGWPSFDRPLADA 78
>sp|Q46EH1|MSRB_METBF Peptide methionine sulfoxide reductase MsrB OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=msrB PE=3 SV=1
Length = 142
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 122 SVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFN 181
+V KSEEEW+ +L+PEQ+ +LRQK TE P +G + E+G+Y C+ACG L+ S TKF
Sbjct: 5 AVEKSEEEWKKVLTPEQYHVLRQKGTERPFSGNLYYNKEKGVYTCAACGQELFSSDTKFE 64
Query: 182 SGCGWPAFYE 191
SG GWP+FY+
Sbjct: 65 SGTGWPSFYD 74
>sp|Q8XYL1|MSRB_RALSO Peptide methionine sulfoxide reductase MsrB OS=Ralstonia
solanacearum (strain GMI1000) GN=msrB PE=3 SV=1
Length = 128
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 55/76 (72%)
Query: 122 SVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFN 181
++ K++ EWR LS ++R+ R+ ATE P TG Y H+ GIY+C CGTPL++S+TKF+
Sbjct: 2 TIEKTDAEWRDQLSDIEYRVTREAATERPFTGRYWDHWARGIYHCVCCGTPLFESSTKFD 61
Query: 182 SGCGWPAFYEGLPGAI 197
+GCGWP+++ + G +
Sbjct: 62 AGCGWPSYFAPINGEV 77
>sp|Q8PWF5|MSRB_METMA Peptide methionine sulfoxide reductase MsrB OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=msrB PE=3 SV=1
Length = 140
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ KSEE+W+++L+PEQ+ +LRQK TE P +G + E+GIY C+ACG L+ S TKF S
Sbjct: 6 IEKSEEDWKSVLTPEQYHVLRQKGTERPFSGNLYYNKEKGIYTCAACGQELFSSDTKFES 65
Query: 183 GCGWPAFYE 191
G GWP+FY+
Sbjct: 66 GTGWPSFYD 74
>sp|B1J4W5|MSRB_PSEPW Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain W619) GN=msrB PE=3 SV=1
Length = 133
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
++K+ EEWRA+L PEQ+++ R K TE P TG+Y+ G Y+C C PL+ S TKF+S
Sbjct: 4 IDKTLEEWRAMLDPEQYQVCRLKGTERPFTGKYNSEKRAGTYHCICCDLPLFDSNTKFDS 63
Query: 183 GCGWPAFY 190
GCGWP+FY
Sbjct: 64 GCGWPSFY 71
>sp|Q1ID16|MSRB_PSEE4 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
entomophila (strain L48) GN=msrB PE=3 SV=1
Length = 131
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
++K+ EEWRA+L P Q+++ R K TE P +G+Y+ +G+Y+C C PL+ S KF+S
Sbjct: 4 IDKTLEEWRAMLDPAQYQVCRLKGTERPFSGKYNSERRDGVYHCICCDLPLFDSKAKFDS 63
Query: 183 GCGWPAFYEGLPGA 196
GCGWP+FYE + A
Sbjct: 64 GCGWPSFYEPIEEA 77
>sp|Q88LQ6|MSRB_PSEPK Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain KT2440) GN=msrB PE=3 SV=1
Length = 131
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EWR++L PEQ+++ R K TE P +G+Y+ +GIY+C CG PL+ + TKF++
Sbjct: 4 IEKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDA 63
Query: 183 GCGWPAFY 190
GCGWP+FY
Sbjct: 64 GCGWPSFY 71
>sp|Q3K935|MSRB_PSEPF Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
fluorescens (strain Pf0-1) GN=msrB PE=3 SV=1
Length = 131
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEWRA+L PEQF + R ATE P +G+Y+ +G+Y+C C PL+ S TKF+S
Sbjct: 4 IEKTLEEWRAMLDPEQFNVCRLSATERPFSGKYNATKTDGVYHCICCNEPLFDSKTKFDS 63
Query: 183 GCGWPAFY 190
GCGWP+FY
Sbjct: 64 GCGWPSFY 71
>sp|O26807|MSRB_METTH Peptide methionine sulfoxide reductase MsrB OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=msrB PE=1 SV=1
Length = 151
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ S++EWR IL PE FR+ R+ TE P TG+Y ++GIY C CGT L+ S TKF+S
Sbjct: 21 IELSDDEWREILDPEAFRVARKAGTEPPFTGKYHDLHDDGIYRCICCGTDLFDSETKFDS 80
Query: 183 GCGWPAFYE 191
G GWP+FY+
Sbjct: 81 GTGWPSFYD 89
>sp|C3K735|MSRB_PSEFS Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
fluorescens (strain SBW25) GN=msrB PE=3 SV=1
Length = 130
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EW+A+L PEQ+ + R K TE P +G+Y+ +G+Y+C C PL+ STTKF+S
Sbjct: 4 LQKTVDEWKAMLDPEQYNVCRLKGTERPFSGKYNATKTDGVYHCICCNAPLFDSTTKFDS 63
Query: 183 GCGWPAFY 190
GCGWP+FY
Sbjct: 64 GCGWPSFY 71
>sp|Q48FR2|MSRB_PSE14 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=msrB PE=1
SV=1
Length = 131
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEW+ +L P Q+++ R K TE P +G+Y++ EG+Y+C C PL+ STTKF+S
Sbjct: 4 LQKTLEEWKEMLDPAQYQVCRLKGTERPFSGKYNETKTEGVYHCICCNEPLFDSTTKFDS 63
Query: 183 GCGWPAFYEGLPGA 196
GCGWP+FY L G+
Sbjct: 64 GCGWPSFYAPLEGS 77
>sp|C5CNS9|MSRB_VARPS Peptide methionine sulfoxide reductase MsrB OS=Variovorax paradoxus
(strain S110) GN=msrB PE=3 SV=1
Length = 136
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 57/81 (70%), Gaps = 6/81 (7%)
Query: 123 VNKSEEEWRAILS-----PEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKST 177
+ K++ EW+A+L+ P F + R ATE P TG+Y+ H+++G Y+C CG L++S+
Sbjct: 5 IEKTDAEWKALLAEKGAEPAAFEVTRHAATERPFTGKYEAHWDDGTYHCICCGAKLFESS 64
Query: 178 TKFNSGCGWPAF-YEGLPGAI 197
TKF++GCGWP+F E +PGAI
Sbjct: 65 TKFDAGCGWPSFSQEAVPGAI 85
>sp|B0KUQ0|MSRB_PSEPG Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain GB-1) GN=msrB PE=3 SV=1
Length = 131
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 50/68 (73%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EWR++L PEQ+++ R K TE P +G+Y+ +GIY+C C PL+ + TKF+S
Sbjct: 4 IEKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCNLPLFDAQTKFDS 63
Query: 183 GCGWPAFY 190
GCGWP+FY
Sbjct: 64 GCGWPSFY 71
>sp|A4G5V5|MSRB_HERAR Peptide methionine sulfoxide reductase MsrB OS=Herminiimonas
arsenicoxydans GN=msrB PE=3 SV=1
Length = 137
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V K++ EWRA+L E++ + R ATE P +G Y H E GIY C C TPL+ S KF+S
Sbjct: 5 VIKTDAEWRAMLDDEEYDVTRHAATEAPFSGRYWDHHEHGIYTCVCCNTPLFASDAKFDS 64
Query: 183 GCGWPAFYEGL 193
GCGWP+++ L
Sbjct: 65 GCGWPSYFTAL 75
>sp|Q8F7W8|MSRB_LEPIN Peptide methionine sulfoxide reductase MsrB OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=msrB PE=3 SV=3
Length = 131
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
VNKS+E+W+ L+PEQ+RILRQK TE TG K+ ++G Y C+ACG L+ S TK+ S
Sbjct: 5 VNKSDEDWKKELTPEQYRILRQKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSDTKYES 64
Query: 183 GCGWPAFYEGLPGAI 197
G GWP+FY+ + +
Sbjct: 65 GSGWPSFYQPVKDGV 79
>sp|Q72NN2|MSRB_LEPIC Peptide methionine sulfoxide reductase MsrB OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=msrB PE=3 SV=3
Length = 131
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
VNKS+E+W+ L+PEQ+RILRQK TE TG K+ ++G Y C+ACG L+ S TK+ S
Sbjct: 5 VNKSDEDWKKELTPEQYRILRQKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSDTKYES 64
Query: 183 GCGWPAFYEGLPGAI 197
G GWP+FY+ + +
Sbjct: 65 GSGWPSFYQPVKDGV 79
>sp|A5W756|MSRB_PSEP1 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=msrB PE=3 SV=1
Length = 131
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ +EWR++L PEQ+++ R K TE P +G+Y+ +GIY+C CG L+ + TKF++
Sbjct: 4 IEKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLALFDAQTKFDA 63
Query: 183 GCGWPAFY 190
GCGWP+FY
Sbjct: 64 GCGWPSFY 71
>sp|Q4K8U5|MSRB_PSEF5 Peptide methionine sulfoxide reductase MsrB OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=msrB PE=3
SV=1
Length = 130
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEWR++L PEQ+ + R K TE P +G+Y+ +G+Y+C C PL+ S KF+S
Sbjct: 4 LEKTLEEWRSMLDPEQYNVCRLKGTERPFSGKYNGTKTDGVYHCICCNEPLFDSKAKFDS 63
Query: 183 GCGWPAFYEGL 193
GCGWP+FYE +
Sbjct: 64 GCGWPSFYEPI 74
>sp|Q89EM9|MSRB_BRAJA Peptide methionine sulfoxide reductase MsrB OS=Bradyrhizobium
japonicum (strain USDA 110) GN=msrB PE=3 SV=1
Length = 139
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KSEE+WR LSP Q+ +LR+KATE P +GEY+ G Y C+ CG L++S KF+S
Sbjct: 13 VIKSEEQWRRELSPIQYAVLREKATERPFSGEYEHDHRAGTYVCAGCGNVLFESDAKFDS 72
Query: 183 GCGWPAF 189
GCGWP+F
Sbjct: 73 GCGWPSF 79
>sp|Q2SJP9|MSRB_HAHCH Peptide methionine sulfoxide reductase MsrB OS=Hahella chejuensis
(strain KCTC 2396) GN=msrB PE=3 SV=1
Length = 139
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V KS++EWR L+ EQ+R+ R K TE P TGEY E G+Y C CG PL+ S K++S
Sbjct: 4 VKKSDQEWRQQLTDEQYRVTRGKGTERPFTGEYYDTKEAGVYVCVCCGEPLFTSENKYDS 63
Query: 183 GCGWPAFY 190
GCGWP+F+
Sbjct: 64 GCGWPSFW 71
>sp|A5GQT3|MSRB_SYNR3 Peptide methionine sulfoxide reductase MsrB OS=Synechococcus sp.
(strain RCC307) GN=msrB PE=3 SV=1
Length = 136
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
V SE +WR+ L+PEQFRI R+ TE TG Y H +G+Y C CG L++S KF+S
Sbjct: 9 VEASENDWRSKLTPEQFRITREGGTERAFTGAYWNHKGDGMYRCICCGAELFRSDRKFDS 68
Query: 183 GCGWPAFYEGL-PGAI 197
G GWP+F+EG+ P AI
Sbjct: 69 GTGWPSFWEGVNPEAI 84
>sp|Q92RA4|MSRB1_RHIME Peptide methionine sulfoxide reductase MsrB 1 OS=Rhizobium meliloti
(strain 1021) GN=msrB1 PE=3 SV=2
Length = 135
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K+ EEWRA L+PEQ+R+ R+ TE P TG + + G Y C CG L++S TKF+S
Sbjct: 9 ITKTNEEWRAALTPEQYRVTREHGTERPFTGPFLDNKRHGTYKCVCCGRALFRSDTKFDS 68
Query: 183 GCGWPAFYEGL-PGAI 197
GCGWP+++ + P AI
Sbjct: 69 GCGWPSYFAPVDPDAI 84
>sp|Q9C8M2|MSRB1_ARATH Peptide methionine sulfoxide reductase B1, chloroplastic
OS=Arabidopsis thaliana GN=MSRB1 PE=1 SV=1
Length = 202
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 126 SEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGCG 185
SE EW+ L+PEQ+ I RQK TE TGEY G+YNC C TPL+ S+TKF+SG G
Sbjct: 74 SENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLFDSSTKFDSGTG 133
Query: 186 WPAFYEGL 193
WP++Y+ +
Sbjct: 134 WPSYYQPI 141
>sp|P25566|MXR2_YEAST Peptide methionine sulfoxide reductase 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MXR2 PE=1
SV=1
Length = 168
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 105 KRSF--RGGVVLAV---ASGPASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHF 159
+R+F R +VL S S ++ +W L+P Q +LR KATE P TG Y
Sbjct: 13 RRTFPGRRNIVLTQYWNKSKKMSDESNDVKWNDALTPLQLMVLRDKATERPNTGAYLHTN 72
Query: 160 EEGIYNCSACGTPLYKSTTKFNSGCGWPAFYEGL-PGAI 197
E G+Y+C+ C PLY S KF++ CGWPAFYE + PGAI
Sbjct: 73 ESGVYHCANCDRPLYSSKAKFDARCGWPAFYEEVSPGAI 111
>sp|C5BR54|MSRB_TERTT Peptide methionine sulfoxide reductase MsrB OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=msrB PE=3 SV=1
Length = 135
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 125 KSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGC 184
K ++ WR+ L+ E+FRI R+K TE P +G+Y E G Y C C TPL+KS KF++GC
Sbjct: 7 KDDDYWRSKLTDEEFRICREKGTEMPFSGKYVDTTEAGTYLCRCCNTPLFKSLAKFDAGC 66
Query: 185 GWPAFYEGLPGAI 197
GWP+F+E L +
Sbjct: 67 GWPSFFEPLEKGV 79
>sp|B3PK10|MSRB_CELJU Peptide methionine sulfoxide reductase MsrB OS=Cellvibrio japonicus
(strain Ueda107) GN=msrB PE=3 SV=1
Length = 140
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 130 WRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNSGCGWPAF 189
WR L+PEQ+RI R+K TE P TGEY + F G Y+C CG L+ + TKF++GCGWP+F
Sbjct: 12 WREKLTPEQYRICREKGTERPFTGEYWQEFRPGRYHCRCCGELLFDADTKFDAGCGWPSF 71
Query: 190 Y 190
Y
Sbjct: 72 Y 72
>sp|Q0DC89|MSRB1_ORYSJ Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza
sativa subsp. japonica GN=MSRB1 PE=2 SV=2
Length = 214
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 122 SVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFN 181
S + ++EEWR L+ +Q+ I RQK TE TGEY GIY+C C TPL++S+TKF+
Sbjct: 86 STSLTDEEWRKRLTKDQYYITRQKGTERAFTGEYWNTKTPGIYHCVCCDTPLFESSTKFD 145
Query: 182 SGCGWPAFYEGLPGAINCSM 201
SG GWP++Y+ + + C +
Sbjct: 146 SGTGWPSYYQPIGDNVKCKL 165
>sp|Q8INK9|MSRB_DROME Methionine-R-sulfoxide reductase B1 OS=Drosophila melanogaster
GN=SelR PE=1 SV=3
Length = 208
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 8/84 (9%)
Query: 118 SGPASV--NKSE------EEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSAC 169
SGPA+ NKSE EE R L+P Q+++ ++ TE P TG Y+KH+E+G+Y C C
Sbjct: 37 SGPAATMDNKSEKVTVNKEELRKRLTPVQYQVTQEAGTERPFTGCYNKHYEKGVYQCIVC 96
Query: 170 GTPLYKSTTKFNSGCGWPAFYEGL 193
L+ S TK++SGCGWPAF + L
Sbjct: 97 HQDLFSSETKYDSGCGWPAFNDVL 120
>sp|Q47EU6|MSRB_DECAR Peptide methionine sulfoxide reductase MsrB OS=Dechloromonas
aromatica (strain RCB) GN=msrB PE=3 SV=1
Length = 132
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 123 VNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKFNS 182
+ K++ EWRA L ++R+ RQK TE TG+Y ++G Y C CG PL++S TKF+S
Sbjct: 4 IEKTDAEWRAQLDENEYRVTRQKGTERAFTGKYWDTHDDGTYRCICCGAPLFRSETKFDS 63
Query: 183 GCGWPAFY 190
GCGWP+F+
Sbjct: 64 GCGWPSFH 71
>sp|B0VR86|MSRB_ACIBS Peptide methionine sulfoxide reductase MsrB OS=Acinetobacter
baumannii (strain SDF) GN=msrB PE=3 SV=1
Length = 139
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 121 ASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKF 180
VNK++ EW+ LSPE++RI RQK TE TG+Y + G Y C CG L+ S K+
Sbjct: 2 GKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKY 61
Query: 181 NSGCGWPAFYEGLPGAI 197
+SGCGWP+F+ L G++
Sbjct: 62 DSGCGWPSFFRPLNGSV 78
>sp|B0VC45|MSRB_ACIBY Peptide methionine sulfoxide reductase MsrB OS=Acinetobacter
baumannii (strain AYE) GN=msrB PE=3 SV=1
Length = 139
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 121 ASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKF 180
VNK++ EW+ LSPE++RI RQK TE TG+Y + G Y C CG L+ S K+
Sbjct: 2 GKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKY 61
Query: 181 NSGCGWPAFYEGLPGAI 197
+SGCGWP+F+ L G++
Sbjct: 62 DSGCGWPSFFRPLNGSV 78
>sp|A3M4Q3|MSRB_ACIBT Peptide methionine sulfoxide reductase MsrB OS=Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755) GN=msrB PE=3
SV=2
Length = 139
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 121 ASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKF 180
VNK++ EW+ LSPE++RI RQK TE TG+Y + G Y C CG L+ S K+
Sbjct: 2 GKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKY 61
Query: 181 NSGCGWPAFYEGLPGAI 197
+SGCGWP+F+ L G++
Sbjct: 62 DSGCGWPSFFRPLNGSV 78
>sp|B2HYT2|MSRB_ACIBC Peptide methionine sulfoxide reductase MsrB OS=Acinetobacter
baumannii (strain ACICU) GN=msrB PE=3 SV=1
Length = 139
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 121 ASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKF 180
VNK++ EW+ LSPE++RI RQK TE TG+Y + G Y C CG L+ S K+
Sbjct: 2 GKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKY 61
Query: 181 NSGCGWPAFYEGLPGAI 197
+SGCGWP+F+ L G++
Sbjct: 62 DSGCGWPSFFRPLNGSV 78
>sp|B7I415|MSRB_ACIB5 Peptide methionine sulfoxide reductase MsrB OS=Acinetobacter
baumannii (strain AB0057) GN=msrB PE=3 SV=1
Length = 139
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 121 ASVNKSEEEWRAILSPEQFRILRQKATEYPGTGEYDKHFEEGIYNCSACGTPLYKSTTKF 180
VNK++ EW+ LSPE++RI RQK TE TG+Y + G Y C CG L+ S K+
Sbjct: 2 GKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAKY 61
Query: 181 NSGCGWPAFYEGLPGAI 197
+SGCGWP+F+ L G++
Sbjct: 62 DSGCGWPSFFRPLNGSV 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,926,768
Number of Sequences: 539616
Number of extensions: 2895091
Number of successful extensions: 7665
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7420
Number of HSP's gapped (non-prelim): 262
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)