BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 028863
         (202 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8KE30|SAT_CHLTE Sulfate adenylyltransferase OS=Chlorobium tepidum (strain ATCC
           49652 / DSM 12025 / TLS) GN=sat PE=3 SV=1
          Length = 404

 Score = 32.7 bits (73), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 83  PVKLLTRVEQLKLLSKAEKAGLLSAAEKFGLSLSSIEKLGLLSKAEEFGVLSAATDPATP 142
           P+ L T  EQ   ++  E+  L+       +    +E+   + KA E   +    DPA P
Sbjct: 84  PITLSTSKEQADTIAIGEEVALVDDESGELMGSMKVEEKYCIDKAHECREVFKTDDPAHP 143

Query: 143 GALLTLSLGLL-LLGPSCVY 161
           G L+ ++ G + L GP  V+
Sbjct: 144 GVLMVMNQGDVNLAGPVKVF 163


>sp|B4SAM9|SAT_PELPB Sulfate adenylyltransferase OS=Pelodictyon phaeoclathratiforme
           (strain DSM 5477 / BU-1) GN=sat PE=3 SV=1
          Length = 403

 Score = 31.2 bits (69), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 36/88 (40%)

Query: 83  PVKLLTRVEQLKLLSKAEKAGLLSAAEKFGLSLSSIEKLGLLSKAEEFGVLSAATDPATP 142
           P+ L T  EQ   L    +  L+       +   +IE+   + K+ E   +    DP  P
Sbjct: 84  PITLSTTKEQADKLKIGAEVALVDEESGETMGSMTIEEKYAIDKSHECREVFKTDDPKHP 143

Query: 143 GALLTLSLGLLLLGPSCVYLVPEDYPWE 170
           G L+ ++ G + LG S        +P E
Sbjct: 144 GVLMVMNQGDVNLGGSVKVFSEGSFPSE 171


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.132    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,273,999
Number of Sequences: 539616
Number of extensions: 2606618
Number of successful extensions: 8078
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8076
Number of HSP's gapped (non-prelim): 2
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)